| Year |
Citation |
Score |
| 2019 |
Klasberg S, Surendranath V, Lange V, Schöfl G. Bioinformatics Strategies, Challenges, and Opportunities for Next Generation Sequencing-Based HLA Genotyping. Transfusion Medicine and Hemotherapy : Offizielles Organ Der Deutschen Gesellschaft Fur Transfusionsmedizin Und Immunhamatologie. 46: 312-325. PMID 31832057 DOI: 10.1159/000502487 |
0.374 |
|
| 2018 |
Lang K, Surendranath V, Quenzel P, Schöfl G, Schmidt AH, Lange V. Full-Length HLA Class I Genotyping with the MinION Nanopore Sequencer. Methods in Molecular Biology (Clifton, N.J.). 1802: 155-162. PMID 29858807 DOI: 10.1007/978-1-4939-8546-3_10 |
0.332 |
|
| 2018 |
Surendranath V, Lang K, Schmidt AH, Schöfl G, Lange V. P103 The promise of cost-efficient full-length HLA class I genotyping: Advances using nanopore sequencing Human Immunology. 79: 139. DOI: 10.1016/J.Humimm.2018.07.162 |
0.336 |
|
| 2018 |
Schöne B, Fuhrmann M, Surendranath V, Phieler J, Schmidt AH, Lange V. P091 Typeloader for windows: Automated full length submission of novel alleles Human Immunology. 79: 128. DOI: 10.1016/J.Humimm.2018.07.150 |
0.334 |
|
| 2017 |
Albrecht V, Zweiniger C, Surendranath V, Lang K, Schöfl G, Dahl A, Winkler S, Lange V, Böhme I, Schmidt AH. Dual redundant sequencing strategy: Full-length gene characterisation of 1056 novel and confirmatory HLA alleles. Hla. PMID 28547825 DOI: 10.1111/Tan.13057 |
0.34 |
|
| 2017 |
van Deutekom HW, Kooter R, Geerligs J, Ruzius F, Meulenberg P, Surendranath V, Lang K, Schoefl G, Schmidt A, Lange V, Penning MT, Rozemuller EH. P177 NGS typing results using oxford nanopore sequencing: Can minion data be reliably used for HLA typing? Human Immunology. 78: 190. DOI: 10.1016/J.Humimm.2017.06.237 |
0.326 |
|
| 2017 |
Surendranath V, Schoefl G, Lang K, van Deutekom HW, Rozemuller E, Schmidt A, Lange V. P146 Nanopore sequencing as a maturing platform for full-length HLA genotyping Human Immunology. 78: 163. DOI: 10.1016/J.Humimm.2017.06.206 |
0.327 |
|
| 2015 |
Jambor H, Surendranath V, Kalinka AT, Mejstrik P, Saalfeld S, Tomancak P. Systematic imaging reveals features and changing localization of mRNAs in Drosophila development. Elife. 4. PMID 25838129 DOI: 10.7554/Elife.05003 |
0.621 |
|
| 2014 |
Wagner I, Volkmer M, Sharan M, Villaveces JM, Oswald F, Surendranath V, Habermann BH. morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring. Bmc Bioinformatics. 15: 263. PMID 25096057 DOI: 10.1186/1471-2105-15-263 |
0.326 |
|
| 2014 |
Jambor H, Surendranath V, Kalinka AT, Mejstrik P, Saalfeld S, Tomancak P. Author response: Systematic imaging reveals features and changing localization of mRNAs in Drosophila development Elife. DOI: 10.7554/Elife.05003.028 |
0.611 |
|
| 2012 |
Chakraborty D, Kappei D, Theis M, Nitzsche A, Ding L, Paszkowski-Rogacz M, Surendranath V, Berger N, Schulz H, Saar K, Hubner N, Buchholz F. Combined RNAi and localization for functionally dissecting long noncoding RNAs. Nature Methods. 9: 360-2. PMID 22327834 DOI: 10.1038/Nmeth.1894 |
0.346 |
|
| 2011 |
Lipinski KA, Puchta O, Surendranath V, Kudla M, Golik P. Revisiting the yeast PPR proteins--application of an Iterative Hidden Markov Model algorithm reveals new members of the rapidly evolving family. Molecular Biology and Evolution. 28: 2935-48. PMID 21546354 DOI: 10.1093/Molbev/Msr120 |
0.325 |
|
| 2011 |
Bradshaw CR, Surendranath V, Henschel R, Mueller MS, Habermann BH. HMMerThread: detecting remote, functional conserved domains in entire genomes by combining relaxed sequence-database searches with fold recognition. Plos One. 6: e17568. PMID 21423752 DOI: 10.1371/Journal.Pone.0017568 |
0.316 |
|
| 2010 |
Surendranath V, Chusainow J, Hauber J, Buchholz F, Habermann BH. SeLOX--a locus of recombination site search tool for the detection and directed evolution of site-specific recombination systems. Nucleic Acids Research. 38: W293-8. PMID 20529878 DOI: 10.1093/Nar/Gkq523 |
0.325 |
|
| 2007 |
Kittler R, Pelletier L, Heninger AK, Slabicki M, Theis M, Miroslaw L, Poser I, Lawo S, Grabner H, Kozak K, Wagner J, Surendranath V, Richter C, Bowen W, Jackson AL, et al. Genome-scale RNAi profiling of cell division in human tissue culture cells. Nature Cell Biology. 9: 1401-12. PMID 17994010 DOI: 10.1038/Ncb1659 |
0.326 |
|
| 2007 |
Waridel P, Frank A, Thomas H, Surendranath V, Sunyaev S, Pevzner P, Shevchenko A. Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing. Proteomics. 7: 2318-29. PMID 17623296 DOI: 10.1002/Pmic.200700003 |
0.328 |
|
| 2007 |
Kittler R, Surendranath V, Heninger AK, Slabicki M, Theis M, Putz G, Franke K, Caldarelli A, Grabner H, Kozak K, Wagner J, Rees E, Korn B, Frenzel C, Sachse C, et al. Genome-wide resources of endoribonuclease-prepared short interfering RNAs for specific loss-of-function studies. Nature Methods. 4: 337-44. PMID 17351622 DOI: 10.1038/Nmeth1025 |
0.35 |
|
| 2006 |
Bradshaw CR, Surendranath V, Habermann B. ProFAT: a web-based tool for the functional annotation of protein sequences. Bmc Bioinformatics. 7: 466. PMID 17059594 DOI: 10.1186/1471-2105-7-466 |
0.364 |
|
| 2004 |
Navarro JD, Talreja N, Peri S, Vrushabendra BM, Rashmi BP, Padma N, Surendranath V, Jonnalagadda CK, Kousthub PS, Deshpande N, Shanker K, Pandey A. BioBuilder as a database development and functional annotation platform for proteins. Bmc Bioinformatics. 5: 43. PMID 15099404 DOI: 10.1186/1471-2105-5-43 |
0.312 |
|
| 2004 |
Peri S, Navarro JD, Kristiansen TZ, Amanchy R, Surendranath V, Muthusamy B, Gandhi TK, Chandrika KN, Deshpande N, Suresh S, Rashmi BP, Shanker K, Padma N, Niranjan V, Harsha HC, et al. Human protein reference database as a discovery resource for proteomics. Nucleic Acids Research. 32: D497-501. PMID 14681466 DOI: 10.1093/Nar/Gkh070 |
0.324 |
|
| 2003 |
Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, Surendranath V, Niranjan V, Muthusamy B, Gandhi TK, Gronborg M, Ibarrola N, Deshpande N, Shanker K, Shivashankar HN, Rashmi BP, et al. Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Research. 13: 2363-71. PMID 14525934 DOI: 10.1101/Gr.1680803 |
0.307 |
|
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