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Jens Meiler - Publications

Vanderbilt University, Nashville, TN 

160 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Woods H, Leman JK, Meiler J. Modeling membrane geometries implicitly in Rosetta. Protein Science : a Publication of the Protein Society. 33: e4908. PMID 38358133 DOI: 10.1002/pro.4908  0.716
2024 Melancon K, Pliushcheuskaya P, Meiler J, Künze G. Targeting ion channels with ultra-large library screening for hit discovery. Frontiers in Molecular Neuroscience. 16: 1336004. PMID 38249296 DOI: 10.3389/fnmol.2023.1336004  0.761
2023 Sekar TV, Elghonaimy EA, Swancutt KL, Diegeler S, Gonzalez I, Hamilton C, Leung PQ, Meiler J, Martina CE, Whitney M, Aguilera TA. Simultaneous selection of nanobodies for accessible epitopes on immune cells in the tumor microenvironment. Nature Communications. 14: 7473. PMID 37978291 DOI: 10.1038/s41467-023-43038-z  0.774
2023 Marin A, Mamun AA, Patel H, Akamatsu H, Ye D, Sudhan DR, Eli L, Marcelain K, Brown BP, Meiler J, Arteaga CL, Hanker AB. Acquired secondary HER2 mutations enhance HER2/MAPK signaling and promote resistance to HER2 kinase inhibition in breast cancer. Cancer Research. PMID 37404061 DOI: 10.1158/0008-5472.CAN-22-3617  0.559
2023 Martina CE, Crowe JE, Meiler J. Glycan masking in vaccine design: Targets, immunogens and applications. Frontiers in Immunology. 14: 1126034. PMID 37033915 DOI: 10.3389/fimmu.2023.1126034  0.763
2023 Ledwitch KV, Künze G, McKinney JR, Okwei E, Larochelle K, Pankewitz L, Ganguly S, Darling HL, Coin I, Meiler J. Sparse pseudocontact shift NMR data obtained from a non-canonical amino acid-linked lanthanide tag improves integral membrane protein structure prediction. Journal of Biomolecular Nmr. PMID 37016190 DOI: 10.1007/s10858-023-00412-9  0.545
2023 Okwei E, Smith ST, Bender BJ, Allison B, Ganguly S, Geanes A, Zhang X, Ledwitch K, Meiler J. Rosetta's Predictive Ability for Low-Affinity Ligand Binding in Fragment-Based Drug Discovery. Biochemistry. PMID 36626571 DOI: 10.1021/acs.biochem.2c00649  0.512
2022 Schoeder CT, Gilchuk P, Sangha AK, Ledwitch KV, Malherbe DC, Zhang X, Binshtein E, Williamson LE, Martina CE, Dong J, Armstrong E, Sutton R, Nargi R, Rodriguez J, Kuzmina N, ... ... Meiler J, et al. Epitope-focused immunogen design based on the ebolavirus glycoprotein HR2-MPER region. Plos Pathogens. 18: e1010518. PMID 35584193 DOI: 10.1371/journal.ppat.1010518  0.782
2022 Borza CM, Bolas G, Zhang X, Browning Monroe MB, Zhang MZ, Meiler J, Skwark MJ, Harris RC, Lapierre LA, Goldenring JR, Hook M, Rivera J, Brown KL, Leitinger B, Tyska MJ, et al. The Collagen Receptor Discoidin Domain Receptor 1b Enhances Integrin β1-Mediated Cell Migration by Interacting With Talin and Promoting Rac1 Activation. Frontiers in Cell and Developmental Biology. 10: 836797. PMID 35309920 DOI: 10.3389/fcell.2022.836797  0.688
2021 Koehler Leman J, Lyskov S, Lewis SM, Adolf-Bryfogle J, Alford RF, Barlow K, Ben-Aharon Z, Farrell D, Fell J, Hansen WA, Harmalkar A, Jeliazkov J, Kuenze G, Krys JD, Ljubetič A, ... ... Meiler J, et al. Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks. Nature Communications. 12: 6947. PMID 34845212 DOI: 10.1038/s41467-021-27222-7  0.78
2021 Schoeder CT, Schmitz S, Adolf-Bryfogle J, Sevy AM, Finn JA, Sauer MF, Bozhanova NG, Mueller BK, Sangha AK, Bonet J, Sheehan JH, Kuenze G, Marlow B, Smith ST, Woods H, ... ... Meiler J, et al. Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design. Biochemistry. PMID 33705117 DOI: 10.1021/acs.biochem.0c00912  0.785
2020 Gulsevin A, Meiler J. An Investigation of Three-Finger Toxin-nAChR Interactions through Rosetta Protein Docking. Toxins. 12. PMID 32947868 DOI: 10.20944/Preprints202008.0318.V1  0.307
2020 Finn JA, Dong J, Sevy AM, Parrish E, Gilchuk I, Nargi R, Scarlett-Jones M, Reichard W, Bombardi R, Voss TG, Meiler J, Crowe JE. Identification of Structurally Related Antibodies in Antibody Sequence Databases Using Rosetta-Derived Position-Specific Scoring. Structure (London, England : 1993). PMID 32783953 DOI: 10.1016/J.Str.2020.07.012  0.307
2020 Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, Basanta B, Bender BJ, Blacklock K, Bonet J, Boyken SE, ... ... Meiler J, et al. Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature Methods. PMID 32483333 DOI: 10.1038/S41592-020-0848-2  0.737
2020 Seacrist CD, Kuenze G, Hoffmann RM, Moeller BE, Burke JE, Meiler J, Blind RD. Integrated Structural Modeling of Full-Length LRH-1 Reveals Inter-domain Interactions Contribute to Receptor Structure and Function. Structure (London, England : 1993). PMID 32433991 DOI: 10.1016/J.Str.2020.04.020  0.308
2020 Koehler Leman J, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, ... ... Meiler J, et al. Better together: Elements of successful scientific software development in a distributed collaborative community. Plos Computational Biology. 16: e1007507. PMID 32365137 DOI: 10.1371/Journal.Pcbi.1007507  0.774
2020 Sauer MF, Sevy AM, Crowe JE, Meiler J. Multi-state design of flexible proteins predicts sequences optimal for conformational change. Plos Computational Biology. 16: e1007339. PMID 32032348 DOI: 10.1371/Journal.Pcbi.1007339  0.318
2020 Wedemeyer MJ, Mueller BK, Bender BJ, Meiler J, Volkman BF. Comparative modeling and docking of chemokine-receptor interactions with Rosetta. Biochemical and Biophysical Research Communications. PMID 31924303 DOI: 10.1016/J.Bbrc.2019.12.076  0.322
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Members of the RosettaCommons Consortium. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S009  0.736
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Details of Remaining Collective Challenges. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S008  0.748
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Commercial spin-off companies from the Rosetta community. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S007  0.74
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Values Statement: Equality and Inclusion in the RosettaCommons. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S005  0.727
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Descriptions of the Rosetta board positions. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S004  0.735
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Typical development workflow in the Rosetta community. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S003  0.751
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Specific tests for Rosetta running on our automated testing framework. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S002  0.741
2020 Leman JK, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J, Bystroff C, Schief W, Gront D, Schueler-Furman O, ... ... Meiler J, et al. Growth in Rosetta PIs and conference attendees. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1007507.S001  0.73
2019 Del Alamo D, Tessmer MH, Stein RA, Feix JB, Mchaourab HS, Meiler J. Rapid Simulation of Unprocessed DEER Decay Data for Protein Fold Prediction. Biophysical Journal. PMID 31892409 DOI: 10.1016/J.Bpj.2019.12.011  0.35
2019 Berman HM, Adams PD, Bonvin AA, Burley SK, Carragher B, Chiu W, DiMaio F, Ferrin TE, Gabanyi MJ, Goddard TD, Griffin PR, Haas J, Hanke CA, Hoch JC, Hummer G, ... ... Meiler J, et al. Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures. Structure (London, England : 1993). PMID 31780431 DOI: 10.1016/J.Str.2019.11.002  0.323
2019 Kuenze G, Bonneau R, Leman JK, Meiler J. Integrative Protein Modeling in RosettaNMR from Sparse Paramagnetic Restraints. Structure (London, England : 1993). PMID 31522945 DOI: 10.1016/J.Str.2019.08.012  0.792
2019 Kuenze G, Duran AM, Woods H, Brewer KR, McDonald EF, Vanoye CG, George AL, Sanders CR, Meiler J. Upgraded molecular models of the human KCNQ1 potassium channel. Plos One. 14: e0220415. PMID 31518351 DOI: 10.1371/Journal.Pone.0220415  0.319
2019 Li B, Mendenhall J, Meiler J. Interfaces Between Alpha-helical Integral Membrane Proteins: Characterization, Prediction, and Docking. Computational and Structural Biotechnology Journal. 17: 699-711. PMID 31303974 DOI: 10.1016/J.Csbj.2019.05.005  0.351
2019 Kuenze G, Meiler J. Protein structure prediction using sparse NOE and RDC restraints with Rosetta in CASP13. Proteins. PMID 31292988 DOI: 10.1002/Prot.25769  0.372
2019 Xia Y, Ledwitch K, Kuenze G, Duran A, Li J, Sanders CR, Manning C, Meiler J. A unified structural model of the mammalian translocator protein (TSPO). Journal of Biomolecular Nmr. PMID 31243635 DOI: 10.1007/S10858-019-00257-1  0.349
2019 Brown B, Mendenhall JL, Meiler J. BCL::MolAlign: Three-Dimensional Small Molecule Alignment for Pharmacophore Mapping. Journal of Chemical Information and Modeling. PMID 30707580 DOI: 10.1021/Acs.Jcim.9B00020  0.316
2019 Wedemeyer MJ, Mueller BK, Bender BJ, Meiler J, Volkman BF. Modeling the complete chemokine-receptor interaction. Methods in Cell Biology. 149: 289-314. PMID 30616825 DOI: 10.1016/Bs.Mcb.2018.09.005  0.312
2018 Bender BJ, Vortmeier G, Ernicke S, Bosse M, Kaiser A, Els-Heindl S, Krug U, Beck-Sickinger A, Meiler J, Huster D. Structural Model of Ghrelin Bound to its G Protein-Coupled Receptor. Structure (London, England : 1993). PMID 30686667 DOI: 10.1016/J.Str.2018.12.004  0.311
2018 Bhate MP, Lemmin T, Kuenze G, Mensa B, Ganguly S, Peters J, Schmidt N, Pelton JG, Gross C, Meiler J, DeGrado WF. Structure and function of the transmembrane domain of NsaS, an antibiotic sensing histidine kinase in S. aureus. Journal of the American Chemical Society. PMID 29771498 DOI: 10.1021/Jacs.7B09670  0.561
2018 Combs SA, Mueller BK, Meiler J. Holistic Approach to Partial Covalent Interactions in Protein Structure Prediction and Design with Rosetta. Journal of Chemical Information and Modeling. PMID 29641200 DOI: 10.1021/Acs.Jcim.7B00398  0.314
2018 Xia Y, Fischer AW, Teixeira P, Weiner B, Meiler J. Integrated Structural Biology for α-Helical Membrane Protein Structure Determination. Structure (London, England : 1993). PMID 29526436 DOI: 10.1016/J.Str.2018.02.006  0.323
2018 Sivley RM, Dou X, Meiler J, Bush WS, Capra JA. Comprehensive Analysis of Constraint on the Spatial Distribution of Missense Variants in Human Protein Structures. American Journal of Human Genetics. PMID 29455857 DOI: 10.1016/J.Ajhg.2018.01.017  0.301
2018 Sevy AM, Panda S, Crowe JE, Meiler J, Vorobeychik Y. Integrating linear optimization with structural modeling to increase HIV neutralization breadth. Plos Computational Biology. 14: e1005999. PMID 29451898 DOI: 10.1371/Journal.Pcbi.1005999  0.344
2018 Joedicke L, Mao J, Kuenze G, Reinhart C, Kalavacherla T, Jonker HRA, Richter C, Schwalbe H, Meiler J, Preu J, Michel H, Glaubitz C. The molecular basis of subtype selectivity of human kinin G-protein-coupled receptors. Nature Chemical Biology. PMID 29334381 DOI: 10.1038/Nchembio.2551  0.462
2018 Tessmer MH, Anderson DM, Pickrum AM, Riegert MO, Moretti R, Meiler J, Feix JB, Frank DW. Identification of a ubiquitin-binding interface using Rosetta and DEER. Proceedings of the National Academy of Sciences of the United States of America. PMID 29295930 DOI: 10.1073/Pnas.1716861115  0.353
2018 Mao J, Lopez JJ, Shukla AK, Kuenze G, Meiler J, Schwalbe H, Michel H, Glaubitz C. Backbone structure of free bradykinin (BK) in DDM/CHS detergent micelle determined by MAS SSNMR Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr34207  0.421
2018 Mao J, Lopez JJ, Shukla AK, Kuenze G, Meiler J, Schwalbe H, Michel H, Glaubitz C. Backbone structure of bradykinin (BK) peptide bound to human Bradykinin 2 Receptor (B2R) determined by MAS SSNMR Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr34206  0.437
2017 Fu DY, Meiler J. The Predictive Power of Different Types of Experimental Restraints in Small Molecule Docking: A Review. Journal of Chemical Information and Modeling. PMID 29286651 DOI: 10.1021/Acs.Jcim.7B00418  0.304
2017 Duran AM, Meiler J. Computational Design of Membrane Proteins using RosettaMembrane. Protein Science : a Publication of the Protein Society. PMID 29090504 DOI: 10.1002/Pro.3335  0.322
2017 Li B, Fooksa M, Heinze S, Meiler J. Finding the needle in the haystack: towards solving the protein-folding problem computationally. Critical Reviews in Biochemistry and Molecular Biology. 1-28. PMID 28976219 DOI: 10.1080/10409238.2017.1380596  0.327
2017 Moretti R, Lyskov S, Das R, Meiler J, Gray JJ. Web-accessible molecular modeling with Rosetta: The Rosetta Online Server That Includes Everyone (ROSIE). Protein Science : a Publication of the Protein Society. PMID 28960691 DOI: 10.1002/Pro.3313  0.655
2017 Teixeira PL, Mendenhall JL, Heinze S, Weiner B, Skwark MJ, Meiler J. Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning. Plos One. 12: e0177866. PMID 28542325 DOI: 10.1371/Journal.Pone.0177866  0.734
2017 Li B, Mendenhall J, Nguyen ED, Weiner BE, Fischer AW, Meiler J. Improving Prediction of Helix-Helix Packing in Membrane Proteins Using Predicted Contact Numbers as Restraints. Proteins. PMID 28263405 DOI: 10.1002/Prot.25281  0.327
2016 Borza CM, Su Y, Tran TL, Yu L, Steyns N, Temple KJ, Skwark MJ, Meiler J, Lindsley CW, Hicks BR, Leitinger B, Zent R, Pozzi A. Discoidin domain receptor 1 kinase activity is required for regulating collagen IV synthesis. Matrix Biology : Journal of the International Society For Matrix Biology. PMID 27915093 DOI: 10.1016/J.Matbio.2016.11.009  0.698
2016 Beck-Sickinger AG, Burkert K, Zellmann T, Kaiser A, Meier R, Stichel J, Meiler J, Mittapalli GK, Roberts E. Deep Hydrophobic Binding Cavity is the Main Interaction of Different Y2R Antagonists. Chemmedchem. PMID 27874262 DOI: 10.1002/Cmdc.201600433  0.303
2016 Kroncke BM, Van Horn WD, Smith J, Kang C, Welch RC, Song Y, Nannemann DP, Taylor KC, Sisco NJ, George AL, Meiler J, Vanoye CG, Sanders CR. Structural basis for KCNE3 modulation of potassium recycling in epithelia. Science Advances. 2: e1501228. PMID 27626070 DOI: 10.1126/Sciadv.1501228  0.758
2016 Kroncke BM, Duran AM, Mendenhall JL, Meiler J, Blume JD, Sanders CR. Documentation of an Imperative to Improve Methods for Predicting Membrane Protein Stability. Biochemistry. PMID 27564391 DOI: 10.1021/Acs.Biochem.6B00537  0.315
2016 Bender BJ, Cisneros A, Duran AM, Finn JA, Fu D, Lokits AD, Mueller BK, Sangha AK, Sauer MF, Sevy AM, Sliwoski G, Sheehan JH, DiMaio F, Meiler J, Moretti R. Protocols for Molecular Modeling with Rosetta3 and RosettaScripts. Biochemistry. PMID 27490953 DOI: 10.1021/Acs.Biochem.6B00444  0.358
2016 Nnamani MC, Ganguly S, Erkenbrack EM, Lynch VJ, Mizoue LS, Tong Y, Darling HL, Fuxreiter M, Meiler J, Wagner GP. A Derived Allosteric Switch Underlies the Evolution of Conditional Cooperativity between HOXA11 and FOXO1. Cell Reports. PMID 27239043 DOI: 10.1016/J.Celrep.2016.04.088  0.54
2016 Finn JA, Koehler Leman J, Willis JR, Cisneros A, Crowe JE, Meiler J. Improving Loop Modeling of the Antibody Complementarity-Determining Region 3 Using Knowledge-Based Restraints. Plos One. 11: e0154811. PMID 27182833 DOI: 10.1371/Journal.Pone.0154811  0.319
2016 Figueroa M, Sleutel M, Vandevenne M, Parvizi G, Attout S, Jacquin O, Vandenameele J, Fischer AW, Damblon C, Goormaghtigh E, Valerio-Lepiniec M, Urvoas A, Durand D, Pardon E, Steyaert J, ... ... Meiler J, et al. The unexpected structure of the designed protein octarellin V.1 forms a challenge for protein structure prediction tools. Journal of Structural Biology. PMID 27181418 DOI: 10.1016/J.Jsb.2016.05.004  0.36
2016 Fischer AW, Bordignon E, Bleicken S, García-Sáez AJ, Jeschke G, Meiler J. Pushing the size limit of de novo structure ensemble prediction guided by sparse SDSL-EPR restraints to 200 residues: The monomeric and homodimeric forms of BAX. Journal of Structural Biology. PMID 27129417 DOI: 10.1016/J.Jsb.2016.04.014  0.355
2016 Schaarschmidt J, Nagel MB, Huth S, Jaeschke H, Moretti R, Hintze V, von Bergen M, Kalkhof S, Meiler J, Paschke R. Rearrangement of the extracellular domain/extracellular loop 1 interface is critical for thyrotropin receptor activation. The Journal of Biological Chemistry. PMID 27129207 DOI: 10.1074/Jbc.M115.709659  0.324
2016 Moretti R, Bender BJ, Allison B, Meiler J. Rosetta and the Design of Ligand Binding Sites. Methods in Molecular Biology (Clifton, N.J.). 1414: 47-62. PMID 27094285 DOI: 10.1007/978-1-4939-3569-7_4  0.312
2016 Fischer AW, Heinze S, Putnam DK, Li B, Pino JC, Xia Y, Lopez CF, Meiler J. CASP11 - An Evaluation of a Modular BCL::Fold-Based Protein Structure Prediction Pipeline. Plos One. 11: e0152517. PMID 27046050 DOI: 10.1371/Journal.Pone.0152517  0.357
2016 Li B, Mendenhall J, Nguyen DE, Weiner BE, Fischer AW, Meiler J. Accurate Prediction of Contact Numbers for Multi-Spanning Helical Membrane Proteins. Journal of Chemical Information and Modeling. PMID 26804342 DOI: 10.1021/Acs.Jcim.5B00517  0.318
2015 Kothiwale S, Mendenhall JL, Meiler J. BCL::Conf: small molecule conformational sampling using a knowledge based rotamer library. Journal of Cheminformatics. 7: 47. PMID 26473018 DOI: 10.1186/S13321-015-0095-1  0.308
2015 DeLuca S, Khar K, Meiler J. Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand. Plos One. 10: e0132508. PMID 26207742 DOI: 10.1371/Journal.Pone.0132508  0.316
2015 Sevy AM, Jacobs TM, Crowe JE, Meiler J. Design of Protein Multi-specificity Using an Independent Sequence Search Reduces the Barrier to Low Energy Sequences. Plos Computational Biology. 11: e1004300. PMID 26147100 DOI: 10.1371/Journal.Pcbi.1004300  0.329
2015 Putnam DK, Weiner BE, Woetzel N, Lowe EW, Meiler J. BCL::SAXS: GPU accelerated debye method for computation of small angle X Ray scattering profiles. Proteins. PMID 26018949 DOI: 10.1002/Prot.24838  0.329
2015 Hofmann T, Fischer AW, Meiler J, Kalkhof S. Protein structure prediction guided by crosslinking restraints - A systematic evaluation of the impact of the crosslinking spacer length. Methods (San Diego, Calif.). PMID 25986934 DOI: 10.1016/J.Ymeth.2015.05.014  0.329
2015 Kaiser A, Müller P, Zellmann T, Scheidt HA, Thomas L, Bosse M, Meier R, Meiler J, Huster D, Beck-Sickinger AG, Schmidt P. Unwinding of the C-Terminal Residues of Neuropeptide Y is critical for Y2 Receptor Binding and Activation. Angewandte Chemie (International Ed. in English). 54: 7446-9. PMID 25924821 DOI: 10.1002/Anie.201411688  0.307
2015 Fischer AW, Alexander NS, Woetzel N, Karakas M, Weiner BE, Meiler J. BCL::MP-Fold: Membrane protein structure prediction guided by EPR restraints. Proteins. PMID 25820805 DOI: 10.1002/Prot.24801  0.314
2015 Heinze S, Putnam DK, Fischer AW, Kohlmann T, Weiner BE, Meiler J. CASP10-BCL::Fold efficiently samples topologies of large proteins. Proteins. 83: 547-63. PMID 25581562 DOI: 10.1002/Prot.24733  0.333
2014 Sevy AM, Meiler J. Antibodies: Computer-Aided Prediction of Structure and Design of Function. Microbiology Spectrum. 2. PMID 26104439 DOI: 10.1128/Microbiolspec.Aid-0024-2014  0.317
2014 Lössl P, Kölbel K, Tänzler D, Nannemann D, Ihling CH, Keller MV, Schneider M, Zaucke F, Meiler J, Sinz A. Analysis of nidogen-1/laminin γ1 interaction by cross-linking, mass spectrometry, and computational modeling reveals multiple binding modes. Plos One. 9: e112886. PMID 25387007 DOI: 10.1371/Journal.Pone.0112886  0.755
2014 Margeti? A, Nannemann D, Meiler J, Huster D, Theisgen S. Guanylate Cyclase-Activating Protein-2 Undergoes Structural Changes upon Binding to Detergent Micelles and Bicelles. Biochimica Et Biophysica Acta. 1838: 2767-77. PMID 25051529 DOI: 10.1016/J.Bbamem.2014.07.012  0.767
2014 Doberenz C, Zorn M, Falke D, Nannemann D, Hunger D, Beyer L, Ihling CH, Meiler J, Sinz A, Sawers RG. Pyruvate formate-lyase interacts directly with the formate channel FocA to regulate formate translocation. Journal of Molecular Biology. 426: 2827-39. PMID 24887098 DOI: 10.1016/J.Jmb.2014.05.023  0.757
2014 Austin TM, Nannemann DP, Deluca SL, Meiler J, Delpire E. In silico analysis and experimental verification of OSR1 kinase - Peptide interaction. Journal of Structural Biology. 187: 58-65. PMID 24821279 DOI: 10.1016/J.Jsb.2014.05.001  0.763
2014 Gregory KJ, Nguyen ED, Malosh C, Mendenhall JL, Zic JZ, Bates BS, Noetzel MJ, Squire EF, Turner EM, Rook JM, Emmitte KA, Stauffer SR, Lindsley CW, Meiler J, Conn PJ. Identification of specific ligand-receptor interactions that govern binding and cooperativity of diverse modulators to a common metabotropic glutamate receptor 5 allosteric site. Acs Chemical Neuroscience. 5: 282-95. PMID 24528109 DOI: 10.1021/Cn400225X  0.3
2014 Sliwoski G, Kothiwale S, Meiler J, Lowe EW. Computational methods in drug discovery. Pharmacological Reviews. 66: 334-95. PMID 24381236 DOI: 10.1124/Pr.112.007336  0.306
2014 Pedragosa-Badia X, Sliwoski GR, Dong Nguyen E, Lindner D, Stichel J, Kaufmann KW, Meiler J, Beck-Sickinger AG. Pancreatic polypeptide is recognized by two hydrophobic domains of the human Y4 receptor binding pocket. The Journal of Biological Chemistry. 289: 5846-59. PMID 24375409 DOI: 10.1074/Jbc.M113.502021  0.306
2014 Alexander NS, Preininger AM, Kaya AI, Stein RA, Hamm HE, Meiler J. Energetic analysis of the rhodopsin-G-protein complex links the α5 helix to GDP release. Nature Structural & Molecular Biology. 21: 56-63. PMID 24292645 DOI: 10.1038/Nsmb.2705  0.312
2014 Weiner BE, Alexander N, Akin LR, Woetzel N, Karakas M, Meiler J. BCL::Fold--protein topology determination from limited NMR restraints. Proteins. 82: 587-95. PMID 24123100 DOI: 10.1002/Prot.24427  0.355
2014 Allison B, Combs S, DeLuca S, Lemmon G, Mizoue L, Meiler J. Computational design of protein-small molecule interfaces. Journal of Structural Biology. 185: 193-202. PMID 23962892 DOI: 10.1016/J.Jsb.2013.08.003  0.317
2013 Duran AM, Meiler J. Inverted topologies in membrane proteins: a mini-review. Computational and Structural Biotechnology Journal. 8: e201308004. PMID 24688744 DOI: 10.5936/Csbj.201308004  0.306
2013 Thornburg NJ, Nannemann DP, Blum DL, Belser JA, Tumpey TM, Deshpande S, Fritz GA, Sapparapu G, Krause JC, Lee JH, Ward AB, Lee DE, Li S, Winarski KL, Spiller BW, ... Meiler J, et al. Human antibodies that neutralize respiratory droplet transmissible H5N1 influenza viruses. The Journal of Clinical Investigation. 123: 4405-9. PMID 23999429 DOI: 10.1172/Jci69377  0.746
2013 Figueroa M, Oliveira N, Lejeune A, Kaufmann KW, Dorr BM, Matagne A, Martial JA, Meiler J, Van de Weerdt C. Octarellin VI: using rosetta to design a putative artificial (β/α)8 protein. Plos One. 8: e71858. PMID 23977165 DOI: 10.1371/Journal.Pone.0071858  0.333
2013 Lindert S, Meiler J, McCammon JA. Iterative Molecular Dynamics-Rosetta Protein Structure Refinement Protocol to Improve Model Quality. Journal of Chemical Theory and Computation. 9: 3843-3847. PMID 23956701 DOI: 10.1021/Ct400260C  0.617
2013 Li F, Xia Y, Meiler J, Ferguson-Miller S. Characterization and modeling of the oligomeric state and ligand binding behavior of purified translocator protein 18 kDa from Rhodobacter sphaeroides. Biochemistry. 52: 5884-99. PMID 23952237 DOI: 10.1021/Bi400431T  0.31
2013 Nguyen ED, Norn C, Frimurer TM, Meiler J. Assessment and challenges of ligand docking into comparative models of G-protein coupled receptors. Plos One. 8: e67302. PMID 23844000 DOI: 10.1371/Journal.Pone.0067302  0.338
2013 Combs SA, Deluca SL, Deluca SH, Lemmon GH, Nannemann DP, Nguyen ED, Willis JR, Sheehan JH, Meiler J. Small-molecule ligand docking into comparative models with Rosetta. Nature Protocols. 8: 1277-98. PMID 23744289 DOI: 10.1038/Nprot.2013.074  0.785
2013 Weiner BE, Woetzel N, Karaka? M, Alexander N, Meiler J. BCL::MP-fold: folding membrane proteins through assembly of transmembrane helices. Structure (London, England : 1993). 21: 1107-17. PMID 23727232 DOI: 10.1016/J.Str.2013.04.022  0.335
2013 Aiyegbo MS, Sapparapu G, Spiller BW, Eli IM, Williams DR, Kim R, Lee DE, Liu T, Li S, Woods VL, Nannemann DP, Meiler J, Stewart PL, Crowe JE. Human rotavirus VP6-specific antibodies mediate intracellular neutralization by binding to a quaternary structure in the transcriptional pore. Plos One. 8: e61101. PMID 23671563 DOI: 10.1371/Journal.Pone.0061101  0.75
2013 Preininger AM, Meiler J, Hamm HE. Conformational flexibility and structural dynamics in GPCR-mediated G protein activation: a perspective. Journal of Molecular Biology. 425: 2288-98. PMID 23602809 DOI: 10.1016/J.Jmb.2013.04.011  0.308
2013 Leman JK, Mueller R, Karakas M, Woetzel N, Meiler J. Simultaneous prediction of protein secondary structure and transmembrane spans. Proteins. 81: 1127-40. PMID 23349002 DOI: 10.1002/Prot.24258  0.748
2013 Butkiewicz M, Lowe EW, Mueller R, Mendenhall JL, Teixeira PL, Weaver CD, Meiler J. Benchmarking ligand-based virtual High-Throughput Screening with the PubChem database. Molecules (Basel, Switzerland). 18: 735-56. PMID 23299552 DOI: 10.3390/Molecules18010735  0.301
2013 Lindert S, Stewart PL, Meiler J. Computational determination of the orientation of a heat repeat-like domain of DNA-PKcs. Computational Biology and Chemistry. 42: 1-4. PMID 23246775 DOI: 10.1016/J.Compbiolchem.2012.11.001  0.59
2013 Meiler J. Membrane Protein Structure Determination Through Assembly of Trans-Membrane Helices Guided by Limited Experimental Data Biophysical Journal. 104: 3-4. DOI: 10.1016/J.Bpj.2012.11.2142  0.326
2012 Kaufmann KW, Meiler J. Using RosettaLigand for small molecule docking into comparative models. Plos One. 7: e50769. PMID 23239984 DOI: 10.1371/Journal.Pone.0050769  0.317
2012 Woetzel N, Karaka? M, Staritzbichler R, Müller R, Weiner BE, Meiler J. BCL::Score--knowledge based energy potentials for ranking protein models represented by idealized secondary structure elements. Plos One. 7: e49242. PMID 23173051 DOI: 10.1371/Journal.Pone.0049242  0.326
2012 Karaka? M, Woetzel N, Staritzbichler R, Alexander N, Weiner BE, Meiler J. BCL::Fold--de novo prediction of complex and large protein topologies by assembly of secondary structure elements. Plos One. 7: e49240. PMID 23173050 DOI: 10.1371/Journal.Pone.0049240  0.331
2012 Lindert S, Alexander N, Wötzel N, Karaka? M, Stewart PL, Meiler J. EM-fold: de novo atomic-detail protein structure determination from medium-resolution density maps. Structure (London, England : 1993). 20: 464-78. PMID 22405005 DOI: 10.1016/J.Str.2012.01.023  0.59
2012 Eisenbeis S, Proffitt W, Coles M, Truffault V, Shanmugaratnam S, Meiler J, Höcker B. Potential of fragment recombination for rational design of proteins. Journal of the American Chemical Society. 134: 4019-22. PMID 22329686 DOI: 10.1021/Ja211657K  0.357
2012 Lindert S, Hofmann T, Wötzel N, Karaka? M, Stewart PL, Meiler J. Ab initio protein modeling into CryoEM density maps using EM-Fold. Biopolymers. 97: 669-77. PMID 22302372 DOI: 10.1002/Bip.22027  0.599
2012 Lemmon G, Meiler J. Rosetta Ligand docking with flexible XML protocols. Methods in Molecular Biology (Clifton, N.J.). 819: 143-55. PMID 22183535 DOI: 10.1007/978-1-61779-465-0_10  0.306
2011 Koehler J, Meiler J. Expanding the utility of NMR restraints with paramagnetic compounds: background and practical aspects. Progress in Nuclear Magnetic Resonance Spectroscopy. 59: 360-89. PMID 22027343 DOI: 10.1016/J.Pnmrs.2011.05.001  0.317
2011 Fortenberry C, Bowman EA, Proffitt W, Dorr B, Combs S, Harp J, Mizoue L, Meiler J. Exploring symmetry as an avenue to the computational design of large protein domains. Journal of the American Chemical Society. 133: 18026-9. PMID 21978247 DOI: 10.1021/Ja2051217  0.346
2011 Fleishman SJ, Leaver-Fay A, Corn JE, Strauch EM, Khare SD, Koga N, Ashworth J, Murphy P, Richter F, Lemmon G, Meiler J, Baker D. RosettaScripts: a scripting language interface to the Rosetta macromolecular modeling suite. Plos One. 6: e20161. PMID 21731610 DOI: 10.1371/Journal.Pone.0020161  0.789
2011 Woetzel N, Lindert S, Stewart PL, Meiler J. BCL::EM-Fit: rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement. Journal of Structural Biology. 175: 264-76. PMID 21565271 DOI: 10.1016/J.Jsb.2011.04.016  0.572
2011 Ganguly S, Weiner BE, Meiler J. Membrane protein structure determination using paramagnetic tags. Structure (London, England : 1993). 19: 441-3. PMID 21481766 DOI: 10.1016/J.Str.2011.03.008  0.558
2011 Morin A, Kaufmann KW, Fortenberry C, Harp JM, Mizoue LS, Meiler J. Computational design of an endo-1,4-beta-xylanase ligand binding site. Protein Engineering, Design & Selection : Peds. 24: 503-16. PMID 21349882 DOI: 10.1093/Protein/Gzr006  0.598
2011 Morin A, Meiler J, Mizoue LS. Computational design of protein-ligand interfaces: potential in therapeutic development. Trends in Biotechnology. 29: 159-66. PMID 21295366 DOI: 10.1016/J.Tibtech.2011.01.002  0.591
2011 Leaver-Fay A, Tyka M, Lewis SM, Lange OF, Thompson J, Jacak R, Kaufman K, Renfrew PD, Smith CA, Sheffler W, Davis IW, Cooper S, Treuille A, Mandell DJ, Richter F, ... ... Meiler J, et al. ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules. Methods in Enzymology. 487: 545-74. PMID 21187238 DOI: 10.1016/B978-0-12-381270-4.00019-6  0.759
2011 Kazmier K, Alexander NS, Meiler J, McHaourab HS. Algorithm for selection of optimized EPR distance restraints for de novo protein structure determination. Journal of Structural Biology. 173: 549-57. PMID 21074624 DOI: 10.1016/J.Jsb.2010.11.003  0.32
2011 Hirst SJ, Alexander N, McHaourab HS, Meiler J. RosettaEPR: an integrated tool for protein structure determination from sparse EPR data. Journal of Structural Biology. 173: 506-14. PMID 21029778 DOI: 10.1016/J.Bpj.2010.12.1390  0.339
2011 Meiler J, Lindert S, Stewart P. De Novo Atomic-Detail Structure Prediction for Proteins Guided by Medium Resolution Density Maps Microscopy and Microanalysis. 17: 970-971. DOI: 10.1017/S1431927611005721  0.583
2011 Lindert S, Stewart P, Meiler J. Predicting Models for a Domain of DNA-PKcs Microscopy and Microanalysis. 17: 126-127. DOI: 10.1017/S1431927611001504  0.569
2011 DeLuca S, Meiler J. A Novel Method for Guiding Protein-Ligand Docking with QSAR-Derived Pharmacophore Maps Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.2344  0.327
2010 Kalkhof S, Haehn S, Paulsson M, Smyth N, Meiler J, Sinz A. Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking. Proteins. 78: 3409-27. PMID 20939100 DOI: 10.1002/Prot.22848  0.301
2010 Nannemann DP, Kaufmann KW, Meiler J, Bachmann BO. Design and directed evolution of a dideoxy purine nucleoside phosphorylase. Protein Engineering, Design & Selection : Peds. 23: 607-16. PMID 20525731 DOI: 10.1093/Protein/Gzq033  0.773
2010 Kaufmann KW, Lemmon GH, Deluca SL, Sheehan JH, Meiler J. Practically useful: what the Rosetta protein modeling suite can do for you. Biochemistry. 49: 2987-98. PMID 20235548 DOI: 10.1021/Bi902153G  0.37
2010 Karaka? M, Woetzel N, Meiler J. BCL::contact-low confidence fold recognition hits boost protein contact prediction and de novo structure determination. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 153-68. PMID 19772383 DOI: 10.1089/Cmb.2009.0030  0.32
2010 Kazmier K, Alexander NS, Meiler J, Mchaourab HS. Optimal Selection of EPR Distance Restraints for Global Folding of Protein Structure Biophysical Journal. 98: 571a-572a. DOI: 10.1016/J.Bpj.2009.12.3104  0.319
2009 Farès C, Lakomek NA, Walter KF, Frank BT, Meiler J, Becker S, Griesinger C. Accessing ns-micros side chain dynamics in ubiquitin with methyl RDCs. Journal of Biomolecular Nmr. 45: 23-44. PMID 19652920 DOI: 10.1007/S10858-009-9354-7  0.447
2009 Lindert S, Staritzbichler R, Wötzel N, Karaka? M, Stewart PL, Meiler J. EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps. Structure (London, England : 1993). 17: 990-1003. PMID 19604479 DOI: 10.1016/J.Str.2009.06.001  0.585
2009 Friedland GD, Lakomek NA, Griesinger C, Meiler J, Kortemme T. A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family. Plos Computational Biology. 5: e1000393. PMID 19478996 DOI: 10.1371/Journal.Pcbi.1000393  0.665
2009 Lindert S, Stewart PL, Meiler J. Hybrid approaches: applying computational methods in cryo-electron microscopy. Current Opinion in Structural Biology. 19: 218-25. PMID 19339173 DOI: 10.1016/J.Sbi.2009.02.010  0.581
2009 Durham E, Dorr B, Woetzel N, Staritzbichler R, Meiler J. Solvent accessible surface area approximations for rapid and accurate protein structure prediction. Journal of Molecular Modeling. 15: 1093-108. PMID 19234730 DOI: 10.1007/S00894-009-0454-9  0.316
2009 Alexander N, Mchaourab H, Meiler J. Membrane Protein Structure Determination by Coupling Sparse Experimental Data with Protein Structure Prediction Techniques Biophysical Journal. 96: 654a. DOI: 10.1016/J.Bpj.2008.12.3455  0.326
2009 Lindert S, Staritzbichler R, Woetzel N, Karakas M, Stewart P, Meiler J. Cryo-EM Guided de novo Protein Fold Elucidation Biophysical Journal. 96: 654a. DOI: 10.1016/J.Bpj.2008.12.3454  0.607
2008 Lakomek NA, Lange OF, Walter KF, Farès C, Egger D, Lunkenheimer P, Meiler J, Grubmüller H, Becker S, de Groot BL, Griesinger C. Residual dipolar couplings as a tool to study molecular recognition of ubiquitin. Biochemical Society Transactions. 36: 1433-7. PMID 19021570 DOI: 10.1042/Bst0361433  0.496
2008 Lange OF, Lakomek NA, Farès C, Schröder GF, Walter KF, Becker S, Meiler J, Grubmüller H, Griesinger C, de Groot BL. Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution. Science (New York, N.Y.). 320: 1471-5. PMID 18556554 DOI: 10.1126/Science.1157092  0.471
2008 Lakomek NA, Walter KF, Farès C, Lange OF, de Groot BL, Grubmüller H, Brüschweiler R, Munk A, Becker S, Meiler J, Griesinger C. Self-consistent residual dipolar coupling based model-free analysis for the robust determination of nanosecond to microsecond protein dynamics. Journal of Biomolecular Nmr. 41: 139-55. PMID 18523727 DOI: 10.1007/S10858-008-9244-4  0.45
2008 Alexander N, Bortolus M, Al-Mestarihi A, Mchaourab H, Meiler J. De novo high-resolution protein structure determination from sparse spin-labeling EPR data. Structure (London, England : 1993). 16: 181-95. PMID 18275810 DOI: 10.1016/J.Str.2007.11.015  0.303
2007 Reese M, Sánchez-Pedregal VM, Kubicek K, Meiler J, Blommers MJJ, Griesinger C, Carlomagno T. Structural basis of the activity of the microtubule-stabilizing agent epothilone a studied by NMR spectroscopy in solution Angewandte Chemie - International Edition. 46: 1864-1868. PMID 17274084 DOI: 10.1002/Anie.200604505  0.455
2006 Zanghellini A, Jiang L, Wollacott AM, Cheng G, Meiler J, Althoff EA, Röthlisberger D, Baker D. New algorithms and an in silico benchmark for computational enzyme design. Protein Science : a Publication of the Protein Society. 15: 2785-94. PMID 17132862 DOI: 10.1110/Ps.062353106  0.759
2006 Sánchez-Pedregal VM, Kubicek K, Meiler J, Lyothier I, Paterson I, Carlomagno T. The tubulin-bound conformation of discodermolide derived by NMR studies in solution supports a common pharmacophore model for epothilone and discodermolide Angewandte Chemie - International Edition. 45: 7388-7394. PMID 17036370 DOI: 10.1002/Anie.200602793  0.315
2006 Meiler J, Baker D. ROSETTALIGAND: protein-small molecule docking with full side-chain flexibility. Proteins. 65: 538-48. PMID 16972285 DOI: 10.1002/Prot.21086  0.431
2006 Lakomek NA, Carlomagno T, Becker S, Griesinger C, Meiler J. A thorough dynamic interpretation of residual dipolar couplings in ubiquitin Journal of Biomolecular Nmr. 34: 101-115. PMID 16518697 DOI: 10.1007/S10858-005-5686-0  0.452
2005 Lakomek NA, Farès C, Becker S, Carlomagno T, Meiler J, Griesinger C. Side-chain orientation and hydrogen-bonding imprint supra-τC motion on the protein backbone of ubiquitin Angewandte Chemie - International Edition. 44: 7776-7778. PMID 16276548 DOI: 10.1002/Anie.200502573  0.424
2005 Graña O, Baker D, MacCallum RM, Meiler J, Punta M, Rost B, Tress ML, Valencia A. CASP6 assessment of contact prediction. Proteins. 61: 214-24. PMID 16187364 DOI: 10.1002/Prot.20739  0.397
2005 Bradley P, Malmström L, Qian B, Schonbrun J, Chivian D, Kim DE, Meiler J, Misura KM, Baker D. Free modeling with Rosetta in CASP6. Proteins. 61: 128-34. PMID 16187354 DOI: 10.1002/Prot.20729  0.79
2005 Sánchez-Pedregal VM, Reese M, Meiler J, Blommers MJJ, Griesinger C, Carlomagno T. The INPHARMA method: Protein-mediated interligand NOEs for pharmacophore mapping Angewandte Chemie - International Edition. 44: 4172-4175. PMID 15929149 DOI: 10.1002/Anie.200500503  0.475
2005 Meiler J, Baker D. The fumarate sensor DcuS: progress in rapid protein fold elucidation by combining protein structure prediction methods with NMR spectroscopy. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 173: 310-6. PMID 15780923 DOI: 10.1016/J.Jmr.2004.11.031  0.451
2004 Griesinger C, Peti W, Meiler J, Brüschweiler R. Projection angle restraints for studying structure and dynamics of biomolecules Methods in Molecular Biology (Clifton, N.J.). 278: 107-121. PMID 15317994 DOI: 10.1385/1-59259-809-9:107  0.626
2004 Kuhn M, Meiler J, Baker D. Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins. Proteins. 54: 282-8. PMID 14696190 DOI: 10.1002/Prot.10589  0.4
2003 Meiler J, Baker D. Rapid protein fold determination using unassigned NMR data. Proceedings of the National Academy of Sciences of the United States of America. 100: 15404-9. PMID 14668443 DOI: 10.1073/Pnas.2434121100  0.448
2003 Bradley P, Chivian D, Meiler J, Misura KM, Rohl CA, Schief WR, Wedemeyer WJ, Schueler-Furman O, Murphy P, Schonbrun J, Strauss CE, Baker D. Rosetta predictions in CASP5: successes, failures, and prospects for complete automation. Proteins. 53: 457-68. PMID 14579334 DOI: 10.1002/Prot.10552  0.773
2003 Meiler J, Baker D. Coupled prediction of protein secondary and tertiary structure. Proceedings of the National Academy of Sciences of the United States of America. 100: 12105-10. PMID 14528006 DOI: 10.1073/Pnas.1831973100  0.428
2003 Meiler J, Peti W, Griesinger C. Dipolar couplings in multiple alignments suggest α helical motion in ubiquitin Journal of the American Chemical Society. 125: 8072-8073. PMID 12837055 DOI: 10.1021/Ja029816L  0.636
2003 Carlomagno T, Blommers MJJ, Meiler J, Jahnke W, Schupp T, Petersen F, Schinzer D, Altmann KH, Griesinger C. The high-resolution solution structure of epothilone A bound to tuhulin: An understanding of the structure-activity relationships for a powerful class of antitumor agents Angewandte Chemie - International Edition. 42: 2511-2515. PMID 12800173 DOI: 10.1002/Anie.200351276  0.439
2003 Meiler J. PROSHIFT: Protein chemical shift prediction using artificial neural networks Journal of Biomolecular Nmr. 26: 25-37. PMID 12766400 DOI: 10.1023/A:1023060720156  0.331
2003 Carlomagno T, Blommers MJJ, Meiler J, Jahnke W, Schupp T, Petersen F, Schinzer D, Altmann K, Griesinger C. Cover Picture: The High-Resolution Solution Structure of Epothilone A Bound to Tubulin: An Understanding of the Structure–Activity Relationships for a Powerful Class of Antitumor Agents (Angew. Chem. Int. Ed. 22/2003) Angewandte Chemie International Edition. 42: 2433-2433. DOI: 10.1002/Anie.200390473  0.432
2003 Carlomagno T, Blommers MJJ, Meiler J, Jahnke W, Schupp T, Petersen F, Schinzer D, Altmann K, Griesinger C. Titelbild: The High-Resolution Solution Structure of Epothilone A Bound to Tubulin: An Understanding of the Structure–Activity Relationships for a Powerful Class of Antitumor Agents (Angew. Chem. 22/2003) Angewandte Chemie. 115: 2537-2537. DOI: 10.1002/Ange.200390500  0.432
2002 Hutter MC, Krebs J, Meiler J, Griesinger C, Carafoli E, Helms V. A structural model of the complex formed by phospholamban and the calcium pump of sarcoplasmic reticulum obtained by molecular mechanics Chembiochem. 3: 1200-1208. PMID 12465028 DOI: 10.1002/1439-7633(20021202)3:12<1200::Aid-Cbic1200>3.0.Co;2-H  0.491
2002 Peti W, Meiler J, Brüschweiler R, Griesinger C. Model-free analysis of protein backbone motion from residual dipolar couplings Journal of the American Chemical Society. 124: 5822-5833. PMID 12010057 DOI: 10.1021/Ja011883C  0.631
2001 Carlomagno T, Blommers MJJ, Meiler J, Cuenoud B, Griesinger C. Determination of aliphatic side-chain conformation using cross-correlated relaxation: Application to an extraordinarily stable 2′-aminoethoxy-modified oligonucleotide triplex Journal of the American Chemical Society. 123: 7364-7370. PMID 11472167 DOI: 10.1021/Ja002592R  0.447
2001 Meiler J, Prompers JJ, Peti W, Griesinger C, Brüschweiler R. Model-free approach to the dynamic interpretation of residual dipolar couplings in globular proteins Journal of the American Chemical Society. 123: 6098-6107. PMID 11414844 DOI: 10.1021/Ja010002Z  0.636
2001 Neubauer H, Meiler J, Peti W, Griesinger C. NMR structure determination of saccharose and raffinose by means of homo- and heteronuclear dipolar couplings Helvetica Chimica Acta. 84: 243-258. DOI: 10.1002/1522-2675(20010131)84:1<243::Aid-Hlca243>3.0.Co;2-F  0.407
2000 Meiler J, Peti W, Griesinger C. DipoCoup: A versatile program for 3D-structure homology comparison based on residual dipolar couplings and pseudocontact shifts Journal of Biomolecular Nmr. 17: 283-294. PMID 11014592 DOI: 10.1023/A:1008362931964  0.648
2000 Meiler J, Blomberg N, Nilges M, Griesinger C. A new approach for applying residual dipolar couplings as restraints in structure elucidation Journal of Biomolecular Nmr. 16: 245-252. PMID 10805131 DOI: 10.1023/A:1008378624590  0.459
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