Hai Lin - Publications

Affiliations: 
University of Colorado at Denver, Denver, CO, United States 
Area:
Computational Chemistry, Molecular Dynamics

64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang B, Shang L, Ruan B, Zhang A, Yang S, Jiang H, Liu C, Hong K, Lin H, Gao Z, Hu J, Zeng D, Guo L, Qian Q. Development of Three Sets of High-Throughput Genotyped Rice Chromosome Segment Substitution Lines and QTL Mapping for Eleven Traits. Rice (New York, N.Y.). 12: 33. PMID 31076960 DOI: 10.1186/s12284-019-0293-y  0.44
2019 Liu C, Lin H, Dong Y, Li B, Wang L. Identification and characterization of plant growth-promoting endophyte RE02 from Trifolium repens L. in mining smelter. Environmental Science and Pollution Research International. PMID 31012069 DOI: 10.1007/s11356-019-04904-w  0.44
2019 Liu J, Lin H, Dong Y, Li B. Elucidating the biodegradation mechanism of tributyl phosphate (TBP) by Sphingomonas sp. isolated from TBP-contaminated mine tailings. Environmental Pollution (Barking, Essex : 1987). 250: 284-291. PMID 30999205 DOI: 10.1016/j.envpol.2019.03.127  0.44
2019 Luo M, Lin H, He Y, Li B, Dong Y, Wang L. Efficient simultaneous removal of cadmium and arsenic in aqueous solution by titanium-modified ultrasonic biochar. Bioresource Technology. 284: 333-339. PMID 30953861 DOI: 10.1016/j.biortech.2019.03.108  0.44
2019 Lin H, Liu J, Dong Y, He Y. The effect of substrates on the removal of low-level vanadium, chromium and cadmium from polluted river water by ecological floating beds. Ecotoxicology and Environmental Safety. 169: 856-862. PMID 30597785 DOI: 10.1016/j.ecoenv.2018.11.102  0.44
2018 Gu D, Lin H, Zhang X, Fan Q, Chen S, Shahda S, Liu Y, Sun J, Xie J. Simultaneous Inhibition of MEK and Hh Signaling Reduces Pancreatic Cancer Metastasis. Cancers. 10. PMID 30373214 DOI: 10.3390/cancers10110403  0.44
2018 Liu C, Lin H, Dong Y, Li B, Liu Y. Investigation on microbial community in remediation of lead-contaminated soil by Trifolium repensL. Ecotoxicology and Environmental Safety. 165: 52-60. PMID 30193164 DOI: 10.1016/j.ecoenv.2018.08.054  0.44
2018 Liu M, Lin H, Mei Z, Yang J, Lin J, Liu Y, Pan F. Tuning cobalt and nitrogen co-doped carbon to maximum catalytic sites by superabsorbent for efficient oxygen reduction. Chemsuschem. PMID 30136758 DOI: 10.1002/cssc.201801480  0.44
2018 Su L, Tan Y, Lin H, Liu X, Yu L, Yang Y, Liu S, Bai O, Yang Y, Jin F, Sun J, Liu C, Liu Q, Gao S, Li W. Mutational spectrum of acute myeloid leukemia patients with double mutations based on next-generation sequencing and its prognostic significance. Oncotarget. 9: 24970-24979. PMID 29861846 DOI: 10.18632/oncotarget.23873  0.44
2018 Liu Y, Wu Y, Lin H, Xiao Y, Zhu X, Zhang K, Fan Y, Zhang X. Study on an injectable biomedical paste using cross-linked sodium hyaluronate as a carrier of hydroxyapatite particles. Carbohydrate Polymers. 195: 378-386. PMID 29804989 DOI: 10.1016/j.carbpol.2018.04.093  0.44
2018 Gao Y, Kong W, Li B, Ni Y, Yuan T, Guo L, Lin H, Fan H, Fan Y, Zhang X. Fabrication and characterization of collagen-based injectable and self-crosslinkable hydrogels for cell encapsulation. Colloids and Surfaces. B, Biointerfaces. 167: 448-456. PMID 29709829 DOI: 10.1016/j.colsurfb.2018.04.009  0.44
2018 Lin H, Liu J, Dong Y, Ren K, Zhang Y. Absorption characteristics of compound heavy metals vanadium, chromium, and cadmium in water by emergent macrophytes and its combinations. Environmental Science and Pollution Research International. PMID 29679268 DOI: 10.1007/s11356-018-1785-9  0.56
2018 Howard JM, Lin H, Wallace AJ, Kim G, Draper JM, Haeussler M, Katzman S, Toloue M, Liu Y, Sanford JR. HNRNPA1 promotes recognition of splice site decoys by U2AF2 in vivo. Genome Research. PMID 29650551 DOI: 10.1101/gr.229062.117  0.44
2018 Gufford BT, Robarge JD, Eadon MT, Gao H, Lin H, Liu Y, Desta Z, Skaar TC. Rifampin modulation of xeno- and endobiotic conjugating enzyme mRNA expression and associated microRNAs in human hepatocytes. Pharmacology Research & Perspectives. 6: e00386. PMID 29610665 DOI: 10.1002/prp2.386  0.44
2018 Luo M, Lin H, Li B, Dong Y, He Y, Wang L. A novel modification of lignin on corncob-based biochar to enhance removal of cadmium from water. Bioresource Technology. 259: 312-318. PMID 29573610 DOI: 10.1016/j.biortech.2018.03.075  0.44
2018 Li J, Wang C, Liu X, Liu Q, Lin H, Liu C, Jin F, Yang Y, Bai O, Tan Y, Gao S, Li W. Severe malnutrition evaluated by patient-generated subjective global assessment results in poor outcome among adult patients with acute leukemia: A retrospective cohort study. Medicine. 97: e9663. PMID 29505007 DOI: 10.1097/MD.0000000000009663  0.44
2017 Yang DH, Qian MZ, Wei MM, Li J, Yu MM, Lu XM, Yang H, Lin H, Li X, Zhu JY, Zhang X. The correlation of neutrophil-to-lymphocyte ratio with the presence and activity of myasthenia gravis. Oncotarget. 8: 76099-76107. PMID 29100295 DOI: 10.18632/oncotarget.18546  0.44
2017 Wang L, Lin H, Dong Y, He Y, Liu C. Isolation of vanadium-resistance endophytic bacterium PRE01 from Pteris vittata in stone coal smelting district and characterization for potential use in phytoremediation. Journal of Hazardous Materials. 341: 1-9. PMID 28759788 DOI: 10.1016/j.jhazmat.2017.07.036  0.44
2017 Yang DH, Qian MZ, Wei MM, Li J, Yu MM, Lu XM, Yang H, Lin H, Li X, Zhu JY, Zhang X. The correlation of neutrophil-to-lymphocyte ratio with the presence and activity of myasthenia gravis. Oncotarget. PMID 28636535 DOI: 10.18632/oncotarget.18546  0.44
2017 Zhang X, Li M, Lin H, Rao X, Feng W, Yang Y, Mort M, Cooper DN, Wang Y, Wang Y, Wells C, Zhou Y, Liu Y. regSNPs-splicing: a tool for prioritizing synonymous single-nucleotide substitution. Human Genetics. PMID 28391525 DOI: 10.1007/s00439-017-1783-x  0.44
2017 Celestino-Soper PB, Gao H, Lynnes TC, Lin H, Liu Y, Spoonamore KG, Chen PS, Vatta M. Validation and Utilization of a Clinical Next-Generation Sequencing Panel for Selected Cardiovascular Disorders. Frontiers in Cardiovascular Medicine. 4: 11. PMID 28361054 DOI: 10.3389/fcvm.2017.00011  0.44
2017 Dong Y, Lin H, He Y. Correlation between physicochemical properties of modified clinoptilolite and its performance in the removal of ammonia-nitrogen. Environmental Monitoring and Assessment. 189: 107. PMID 28210889 DOI: 10.1007/s10661-017-5806-9  0.44
2016 Lin H, Yang D, Han S, Liu Y, Yang H. Analog electromagnetically induced transparency for circularly polarized wave using three-dimensional chiral metamaterials. Optics Express. 24: 30068-30078. PMID 28059285  0.44
2016 Jin F, Lin H, Gao S, Wang H, Yan H, Guo J, Hu Z, Jin C, Wang Y, Wang Z, Zhao Y, Liu Y, Zheng X, Tan Y, Li W, et al. Characterization of IFNγ-producing natural killer cells induced by cytomegalovirus reactivation after haploidentical hematopoietic stem cell transplantation. Oncotarget. PMID 27980216 DOI: 10.18632/oncotarget.13916  1
2016 Ren R, Yin P, Zhang Y, Zhou J, Zhou Y, Xu R, Lin H, Huang C. Diagnostic value of fibulin-3 for malignant pleural mesothelioma: A systematic review and meta-analysis. Oncotarget. PMID 27769044 DOI: 10.18632/oncotarget.12707  0.56
2016 Custer SK, Gilson TD, Li H, Todd AG, Astroski JW, Lin H, Liu Y, Androphy EJ. Altered mRNA Splicing in SMN-Depleted Motor Neuron-Like Cells. Plos One. 11: e0163954. PMID 27736905 DOI: 10.1371/journal.pone.0163954  0.44
2016 He Y, Lin H, Dong Y, Liu Q, Wang L. Simultaneous removal of ammonium and phosphate by alkaline-activated and lanthanum-impregnated zeolite. Chemosphere. 164: 387-395. PMID 27596826 DOI: 10.1016/j.chemosphere.2016.08.110  0.44
2016 Fan T, Zhao C, Xiao Z, Guo F, Cai K, Lin H, Liu Y, Meng H, Min Y, Epstein AJ. Fabricating of high-performance functional graphene fibers for micro-capacitive energy storage. Scientific Reports. 6: 29534. PMID 27390070 DOI: 10.1038/srep29534  0.44
2016 Benson EA, Eadon MT, Desta Z, Liu Y, Lin H, Burgess KS, Segar MW, Gaedigk A, Skaar TC. Rifampin Regulation of Drug Transporters Gene Expression and the Association of MicroRNAs in Human Hepatocytes. Frontiers in Pharmacology. 7: 111. PMID 27199754 DOI: 10.3389/fphar.2016.00111  0.44
2016 Han S, Cong L, Lin H, Xiao B, Yang H, Singh R. Tunable electromagnetically induced transparency in coupled three-dimensional split-ring-resonator metamaterials. Scientific Reports. 6: 20801. PMID 26857034 DOI: 10.1038/srep20801  0.44
2016 Celestino-Soper PB, Doytchinova A, Steiner HA, Uradu A, Lynnes TC, Groh WJ, Miller JM, Lin H, Gao H, Wang Z, Liu Y, Chen PS, Vatta M. Correction: Evaluation of the Genetic Basis of Familial Aggregation of Pacemaker Implantation by a Large Next Generation Sequencing Panel. Plos One. 11: e0147455. PMID 26771585 DOI: 10.1371/journal.pone.0147455  0.44
2015 Celestino-Soper PB, Doytchinova A, Steiner HA, Uradu A, Lynnes TC, Groh WJ, Miller JM, Lin H, Gao H, Wang Z, Liu Y, Chen PS, Vatta M. Evaluation of the Genetic Basis of Familial Aggregation of Pacemaker Implantation by a Large Next Generation Sequencing Panel. Plos One. 10: e0143588. PMID 26636822 DOI: 10.1371/journal.pone.0143588  0.32
2015 Farlow JL, Robak LA, Hetrick K, Bowling K, Boerwinkle E, Coban-Akdemir ZH, Gambin T, Gibbs RA, Gu S, Jain P, Jankovic J, Jhangiani S, Kaw K, Lai D, Lin H, et al. Whole-Exome Sequencing in Familial Parkinson Disease. Jama Neurology. 1-8. PMID 26595808 DOI: 10.1001/jamaneurol.2015.3266  0.44
2015 Chon NL, Osterberg JR, Henderson J, Khan HM, Reuter N, Knight JD, Lin H. Membrane Docking of the Synaptotagmin 7 C2A Domain: Computation Reveals Interplay between Electrostatic and Hydrophobic Contributions. Biochemistry. 54: 5696-711. PMID 26333120 DOI: 10.1021/acs.biochem.5b00422  0.32
2015 Farlow JL, Lin H, Sauerbeck L, Lai D, Koller DL, Pugh E, Hetrick K, Ling H, Kleinloog R, van der Vlies P, Deelen P, Swertz MA, Verweij BH, Regli L, Rinkel GJ, et al. Lessons learned from whole exome sequencing in multiplex families affected by a complex genetic disorder, intracranial aneurysm. Plos One. 10: e0121104. PMID 25803036 DOI: 10.1371/journal.pone.0121104  0.44
2015 Nho K, Kim S, Risacher SL, Shen L, Corneveaux JJ, Swaminathan S, Lin H, Ramanan VK, Liu Y, Foroud TM, Inlow MH, Siniard AL, Reiman RA, Aisen PS, Petersen RC, et al. Protective variant for hippocampal atrophy identified by whole exome sequencing. Annals of Neurology. 77: 547-52. PMID 25559091 DOI: 10.1002/ana.24349  0.44
2014 Pezeshki S, Davis C, Heyden A, Lin H. Adaptive-Partitioning QM/MM Dynamics Simulations: 3. Solvent Molecules Entering and Leaving Protein Binding Sites. Journal of Chemical Theory and Computation. 10: 4765-76. PMID 26584363 DOI: 10.1021/ct500553x  0.44
2014 Mourad R, Hsu PY, Juan L, Shen C, Koneru P, Lin H, Liu Y, Nephew K, Huang TH, Li L. Estrogen induces global reorganization of chromatin structure in human breast cancer cells. Plos One. 9: e113354. PMID 25470140 DOI: 10.1371/journal.pone.0113354  0.44
2014 Lin H, Zheng J, O'Beirne P, Ukrainski G, Khaw K, Saia J, Ewing L, Montilla J, Bousanti C, Wehner L, Wrobleski E. Papillary fibroelastomas of the aortic and tricuspid valves mimicking vegetations in a patient with Turner syndrome The Canadian Journal of Cardiology. 30. PMID 25174858 DOI: 10.1016/j.cjca.2014.05.014  0.48
2014 Zhang X, Lin H, Zhao H, Hao Y, Mort M, Cooper DN, Zhou Y, Liu Y. Impact of human pathogenic micro-insertions and micro-deletions on post-transcriptional regulation. Human Molecular Genetics. 23: 3024-34. PMID 24436305 DOI: 10.1093/hmg/ddu019  0.44
2013 Wu X, Thiel W, Pezeshki S, Lin H. Specific Reaction Path Hamiltonian for Proton Transfer in Water: Reparameterized Semiempirical Models. Journal of Chemical Theory and Computation. 9: 2672-86. PMID 26583861 DOI: 10.1021/ct400224n  0.48
2013 Lin HY, Liu Y, Wismeijer D, Crielaard W, Deng DM. Effects of oral implant surface roughness on bacterial biofilm formation and treatment efficacy. The International Journal of Oral & Maxillofacial Implants. 28: 1226-1231. PMID 24066312  0.4
2013 Ramamoorthy A, Liu Y, Philips S, Desta Z, Lin H, Goswami C, Gaedigk A, Li L, Flockhart DA, Skaar TC. Regulation of microRNA expression by rifampin in human hepatocytes. Drug Metabolism and Disposition: the Biological Fate of Chemicals. 41: 1763-8. PMID 23935064 DOI: 10.1124/dmd.113.052886  0.44
2013 Kelly KJ, Liu Y, Zhang J, Goswami C, Lin H, Dominguez JH. Comprehensive genomic profiling in diabetic nephropathy reveals the predominance of proinflammatory pathways. Physiological Genomics. 45: 710-9. PMID 23757392 DOI: 10.1152/physiolgenomics.00028.2013  0.44
2013 He T, Zhao Y, Chen Q, Wang X, Lin H, Han W. Pancreaticojejunostomy versus pancreaticogastrostomy after pancreaticoduodenectomy: a systematic review and meta-analysis. Digestive Surgery. 30: 56-69. PMID 23689124 DOI: 10.1159/000350901  1
2013 Miller DF, Yan PS, Buechlein A, Rodriguez BA, Yilmaz AS, Goel S, Lin H, Collins-Burow B, Rhodes LV, Braun C, Pradeep S, Rupaimoole R, Dalkilic M, Sood AK, Burow ME, et al. A new method for stranded whole transcriptome RNA-seq. Methods (San Diego, Calif.). 63: 126-34. PMID 23557989 DOI: 10.1016/j.ymeth.2013.03.023  0.32
2013 Zhao H, Yang Y, Lin H, Zhang X, Mort M, Cooper DN, Liu Y, Zhou Y. DDIG-in: discriminating between disease-associated and neutral non-frameshifting micro-indels. Genome Biology. 14: R23. PMID 23497682 DOI: 10.1186/gb-2013-14-3-r23  0.44
2013 Todd AG, Lin H, Ebert AD, Liu Y, Androphy EJ. COPI transport complexes bind to specific RNAs in neuronal cells. Human Molecular Genetics. 22: 729-36. PMID 23175440 DOI: 10.1093/hmg/dds480  0.32
2012 Huo H, Lin H, Dong Y, Cheng H, Wang H, Cao L. Ammonia-nitrogen and phosphates sorption from simulated reclaimed waters by modified clinoptilolite. Journal of Hazardous Materials. 229: 292-7. PMID 22727487 DOI: 10.1016/j.jhazmat.2012.06.001  0.44
2007 Zhang Y, Lin H, Truhlar DG. Self-Consistent Polarization of the Boundary in the Redistributed Charge and Dipole Scheme for Combined Quantum-Mechanical and Molecular-Mechanical Calculations. Journal of Chemical Theory and Computation. 3: 1378-98. PMID 26633210 DOI: 10.1021/ct7000107  1
2007 Ellingson BA, Pu J, Lin H, Zhao Y, Truhlar DG. Multicoefficient Gaussian-3 calculation of the rate constant for the OH + CH4 reaction and its 12C/13C kinetic isotope effect with emphasis on the effects of coordinate system and torsional treatment. The Journal of Physical Chemistry. A. 111: 11706-17. PMID 17949061 DOI: 10.1021/jp072843j  1
2007 Heyden A, Lin H, Truhlar DG. Adaptive partitioning in combined quantum mechanical and molecular mechanical calculations of potential energy functions for multiscale simulations. The Journal of Physical Chemistry. B. 111: 2231-41. PMID 17288477 DOI: 10.1021/jp0673617  0.44
2006 Lin H, Zhao Y, Tishchenko O, Truhlar DG. Multiconfiguration Molecular Mechanics Based on Combined Quantum Mechanical and Molecular Mechanical Calculations. Journal of Chemical Theory and Computation. 2: 1237-54. PMID 26626833 DOI: 10.1021/ct600171u  1
2006 Chakraborty A, Zhao Y, Lin H, Truhlar DG. Combined valence bond-molecular mechanics potential-energy surface and direct dynamics study of rate constants and kinetic isotope effects for the H + C2H6 reaction. The Journal of Chemical Physics. 124: 044315. PMID 16460170 DOI: 10.1063/1.2132276  1
2006 Lin H. Instantons, supersymmetric vacua, and emergent geometries Physical Review D - Particles, Fields, Gravitation and Cosmology. 74. DOI: 10.1103/PhysRevD.74.125013  0.44
2005 Lin H, Truhlar DG. Redistributed charge and dipole schemes for combined quantum mechanical and molecular mechanical calculations. The Journal of Physical Chemistry. A. 109: 3991-4004. PMID 16833721 DOI: 10.1021/jp0446332  1
2005 Yurchenko SN, Zheng J, Lin H, Jensen P, Thiel W. Potential-energy surface for the electronic ground state of NH3 up to 20,000 cm-1 above equilibrium. The Journal of Chemical Physics. 123: 134308. PMID 16223289 DOI: 10.1063/1.2047572  0.48
2005 Yurchenko SN, Carvajal M, Lin H, Zheng J, Thiel W, Jensen P. Dipole moment and rovibrational intensities in the electronic ground state of NH3: bridging the gap between ab initio theory and spectroscopic experiment. The Journal of Chemical Physics. 122: 104317. PMID 15836325 DOI: 10.1063/1.1862620  0.48
2005 Lin H, Zhao Y, Ellingson BA, Pu J, Truhlar DG. Temperature dependence of carbon-13 kinetic isotope effects of importance to global climate change. Journal of the American Chemical Society. 127: 2830-1. PMID 15740100 DOI: 10.1021/ja0434026  1
2004 Schöneboom JC, Cohen S, Lin H, Shaik S, Thiel W. Quantum mechanical/molecular mechanical investigation of the mechanism of C-H hydroxylation of camphor by cytochrome P450cam: theory supports a two-state rebound mechanism. Journal of the American Chemical Society. 126: 4017-34. PMID 15038756 DOI: 10.1021/ja039847w  0.48
2004 Lin H. The supergravity dual of the BMN matrix model Journal of High Energy Physics. 8: 1-28.  0.44
2002 Schöneboom JC, Lin H, Reuter N, Thiel W, Cohen S, Ogliaro F, Shaik S. The elusive oxidant species of cytochrome P450 enzymes: Characterization by combined quantum mechanical/molecular mechanical (QM/MM) calculations Journal of the American Chemical Society. 124: 8142-8151. PMID 12095360 DOI: 10.1021/ja026279w  0.44
2001 Lin H. Seasonal predictability in a model atmosphere Journal of Climate. 14: 3017-3028.  0.44
2000 Lin H. A new entropy of black hole in accordance with the third law of thermodynamics Wuli Xuebao/Acta Physica Sinica. 49: 1415.  0.44
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