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Daad Saffarini - Publications

Affiliations: 
University of Wisconsin-Milwaukee, Milwaukee, WI 
Area:
Genetics, Biochemistry, Microbiology Biology
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sharma G, Garg N, Hasan S, Saffarini D, Shirodkar S. Fumarate and nitrite reduction by Prevotella nigrescens and Prevotella buccae isolated from Chronic Periodontitis patients. Microbial Pathogenesis. 176: 106022. PMID 36739100 DOI: 10.1016/j.micpath.2023.106022  0.719
2021 Bertling K, Banerjee A, Saffarini D. Aerobic Respiration and Its Regulation in the Metal Reducer . Frontiers in Microbiology. 12: 723835. PMID 34566926 DOI: 10.3389/fmicb.2021.723835  0.617
2020 Brockman KL, Shirodkar S, Croft TJ, Banerjee R, Saffarini DA. Regulation and Maturation of the Shewanella oneidensis Sulfite Reductase SirA. Scientific Reports. 10: 953. PMID 31969587 DOI: 10.1038/S41598-020-57587-6  0.774
2015 Pirbadian S, Barchinger SE, Leung KM, Byun HS, Jangir Y, Bouhenni RA, Reed SB, Romine MF, Saffarini DA, Shi L, Gorby YA, Golbeck JH, El-Naggar MY. Bacterial Nanowires of Shewanella Oneidensis MR-1 are Outer Membrane and Periplasmic Extensions of the Extracellular Electron Transport Components Biophysical Journal. 108: 368a. DOI: 10.1016/J.Bpj.2014.11.2016  0.782
2015 Saffarini D, Brockman K, Beliav A, Bouhenni R, Shirodkar S. Shewanella oneidensis and extracellular electron transfer to metal oxides Bacteria-Metal Interactions. 21-40. DOI: 10.1007/978-3-319-18570-5_2  0.739
2014 Johanson JJ, Feriancikova L, Banerjee A, Saffarini DA, Wang L, Li J, Grundl TJ, Xu S. Comparison of the transport of Bacteroides fragilis and Escherichia coli within saturated sand packs. Colloids and Surfaces. B, Biointerfaces. 123: 439-45. PMID 25448721 DOI: 10.1016/J.Colsurfb.2014.09.038  0.496
2014 Pirbadian S, Barchinger SE, Leung KM, Byun HS, Jangir Y, Bouhenni RA, Reed SB, Romine MF, Saffarini DA, Shi L, Gorby YA, Golbeck JH, El-Naggar MY. Shewanella oneidensis MR-1 nanowires are outer membrane and periplasmic extensions of the extracellular electron transport components. Proceedings of the National Academy of Sciences of the United States of America. 111: 12883-8. PMID 25143589 DOI: 10.1073/Pnas.1410551111  0.78
2011 Al-Sheboul S, Saffarini D. Identification and analysis of the Shewanella oneidensis major oxygen-independent coproporphyrinogen III oxidase gene. Anaerobe. 17: 501-5. PMID 21726654 DOI: 10.1016/J.Anaerobe.2011.06.008  0.797
2011 Shirodkar S, Reed S, Romine M, Saffarini D. The octahaem SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1. Environmental Microbiology. 13: 108-15. PMID 21199252 DOI: 10.1111/J.1462-2920.2010.02313.X  0.801
2010 Shroff NP, Charania MA, Saffarini DA. ArcB1, a homolog of Escherichia coli ArcB, regulates dimethyl sulfoxide reduction in Shewanella oneidensis MR-1. Journal of Bacteriology. 192: 3227-30. PMID 20400540 DOI: 10.1128/Jb.01695-09  0.758
2010 Bodemer GJ, Antholine WA, Basova LV, Saffarini D, Pacheco AA. The effect of detergents and lipids on the properties of the outer-membrane protein OmcA from Shewanella oneidensis. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 15: 749-58. PMID 20229092 DOI: 10.1007/S00775-010-0643-0  0.326
2010 Reardon CL, Dohnalkova AC, Nachimuthu P, Kennedy DW, Saffarini DA, Arey BW, Shi L, Wang Z, Moore D, McLean JS, Moyles D, Marshall MJ, Zachara JM, Fredrickson JK, Beliaev AS. Role of outer-membrane cytochromes MtrC and OmcA in the biomineralization of ferrihydrite by Shewanella oneidensis MR-1. Geobiology. 8: 56-68. PMID 20002197 DOI: 10.1111/J.1472-4669.2009.00226.X  0.465
2010 Bouhenni RA, Vora GJ, Biffinger JC, Shirodkar S, Brockman K, Ray R, Wu P, Johnson BJ, Biddle EM, Marshall MJ, Fitzgerald LA, Little BJ, Fredrickson JK, Beliaev AS, Ringeisen BR, ... Saffarini DA, et al. The role of Shewanella oneidensis MR-1 outer surface structures in extracellular electron transfer Electroanalysis. 22: 856-864. DOI: 10.1002/Elan.200880006  0.72
2009 Charania MA, Brockman KL, Zhang Y, Banerjee A, Pinchuk GE, Fredrickson JK, Beliaev AS, Saffarini DA. Involvement of a membrane-bound class III adenylate cyclase in regulation of anaerobic respiration in Shewanella oneidensis MR-1. Journal of Bacteriology. 191: 4298-306. PMID 19395492 DOI: 10.1128/Jb.01829-08  0.784
2009 Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, In SC, Byung HK, Kyung SK, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms (Proceedings of the National Academy of Sciences of the United States of America (2006) 103, 30, (11358-11363) DOI 10.1073/pnas.0604517103) Proceedings of the National Academy of Sciences of the United States of America. 106: 9535. DOI: 10.1073/Pnas.0903426106  0.59
2009 Biffinger JC, Fitzgerald LA, Vora Ricky Ray GJ, Wu P, Baldwin JW, Little BJ, Bouhenni R, Shirodkar S, Brockman K, Saffarini D, Ringeisen BR. Comparing current generation from Shewanella oneidensis MR-1 and candidate nanowire deletion mutants in a microbial fuel cell Acs National Meeting Book of Abstracts.  0.707
2008 McLean JS, Pinchuk GE, Geydebrekht OV, Bilskis CL, Zakrajsek BA, Hill EA, Saffarini DA, Romine MF, Gorby YA, Fredrickson JK, Beliaev AS. Oxygen-dependent autoaggregation in Shewanella oneidensis MR-1. Environmental Microbiology. 10: 1861-76. PMID 18412550 DOI: 10.1111/J.1462-2920.2008.01608.X  0.675
2008 Marshall MJ, Plymale AE, Kennedy DW, Shi L, Wang Z, Reed SB, Dohnalkova AC, Simonson CJ, Liu C, Saffarini DA, Romine MF, Zachara JM, Beliaev AS, Fredrickson JK. Hydrogenase- and outer membrane c-type cytochrome-facilitated reduction of technetium(VII) by Shewanella oneidensis MR-1. Environmental Microbiology. 10: 125-36. PMID 17888007 DOI: 10.1111/J.1462-2920.2007.01438.X  0.376
2008 Bretschger O, Obraztsova A, Sturm CA, In SC, Gorby YA, Reed SB, Culley DE, Reardon CL, Barua S, Romine MF, Zhou J, Beliaev AS, Bouhenni R, Saffarini D, Mansfeld F, et al. Current production and metal oxide reduction by Shewanella oneidensis MR-1 wild type and mutants (Applied and Environmental Microbiology (2007) 73, 21, (7003-7012)) Applied and Environmental Microbiology. 74: 553. DOI: 10.1128/Aem.02560-07  0.808
2007 Bretschger O, Obraztsova A, Sturm CA, Chang IS, Gorby YA, Reed SB, Culley DE, Reardon CL, Barua S, Romine MF, Zhou J, Beliaev AS, Bouhenni R, Saffarini D, Mansfeld F, et al. Current production and metal oxide reduction by Shewanella oneidensis MR-1 wild type and mutants. Applied and Environmental Microbiology. 73: 7003-12. PMID 17644630 DOI: 10.1128/Aem.01087-07  0.808
2007 Biju V, Pan D, Gorby YA, Fredrickson J, McLean J, Saffarini D, Lu HP. Combined spectroscopic and topographic characterization of nanoscale domains and their distributions of a redox protein on bacterial cell surfaces. Langmuir : the Acs Journal of Surfaces and Colloids. 23: 1333-8. PMID 17241055 DOI: 10.1021/La061343Z  0.656
2006 Marshall MJ, Beliaev AS, Dohnalkova AC, Kennedy DW, Shi L, Wang Z, Boyanov MI, Lai B, Kemner KM, McLean JS, Reed SB, Culley DE, Bailey VL, Simonson CJ, Saffarini DA, et al. c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis. Plos Biology. 4: e268. PMID 16875436 DOI: 10.1371/Journal.Pbio.0040268  0.353
2006 Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, Chang IS, Kim BH, Kim KS, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proceedings of the National Academy of Sciences of the United States of America. 103: 11358-63. PMID 16849424 DOI: 10.1073/Pnas.0604517103  0.725
2005 Bouhenni R, Gehrke A, Saffarini D. Identification of genes involved in cytochrome c biogenesis in Shewanella oneidensis, using a modified mariner transposon. Applied and Environmental Microbiology. 71: 4935-7. PMID 16085900 DOI: 10.1128/Aem.71.8.4935-4937.2005  0.747
2003 Saffarini DA, Schultz R, Beliaev A. Involvement of cyclic AMP (cAMP) and cAMP receptor protein in anaerobic respiration of Shewanella oneidensis. Journal of Bacteriology. 185: 3668-71. PMID 12775705 DOI: 10.1128/JB.185.12.3668-3671.2003  0.423
2002 Saffarini DA, Blumerman SL, Mansoorabadi KJ. Role of menaquinones in Fe(III) reduction by membrane fractions of Shewanella putrefaciens. Journal of Bacteriology. 184: 846-8. PMID 11790756 DOI: 10.1128/Jb.184.3.846-848.2002  0.337
2001 Beliaev AS, Saffarini DA, McLaughlin JL, Hunnicutt D. MtrC, an outer membrane decahaem c cytochrome required for metal reduction in Shewanella putrefaciens MR-1 Molecular Microbiology. 39: 722-730. PMID 11169112 DOI: 10.1046/j.1365-2958.2001.02257.x  0.465
1998 Beliaev AS, Saffarini DA. Shewanella putrefaciens mtrB encodes an outer membrane protein required for Fe(III) and Mn(IV) reduction Journal of Bacteriology. 180: 6292-6297. PMID 9829939  0.433
1995 Nealson KH, Moser DP, Saffarini DA. Anaerobic electron acceptor chemotaxis in Shewanella putrefaciens Applied and Environmental Microbiology. 61: 1551-1554. PMID 11536689  0.35
1994 Nealson KH, Saffarini D. Iron and manganese in anaerobic respiration: Environmental significance, physiology, and regulation Annual Review of Microbiology. 48: 311-343. PMID 7826009 DOI: 10.1146/Annurev.Mi.48.100194.001523  0.418
1994 Nealson K, Saffarini D, Moser D, Smith MJ. A spectrophotometric method for monitoring tactic responses of bacteria under anaerobic conditions Journal of Microbiological Methods. 20: 211-218. DOI: 10.1016/0167-7012(94)90005-1  0.308
1993 Saffarini DA, Nealson KH. Sequence and genetic characterization of etrA, an fnr analog that regulates anaerobic respiration in Shewanella putrefaciens MR-1 Journal of Bacteriology. 175: 7938-7944. PMID 8253682  0.356
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