David W. Dyer - Publications

Affiliations: 
University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States 
Area:
Microbiology Biology

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kang J, Ismail AM, Dehghan S, Rajaiya J, Allard MW, Lim HC, Dyer DW, Chodosh J, Seto D. Genomics‐based re‐examination of the taxonomy and phylogeny of human and simian Mastadenoviruses : an evolving whole genomes approach, revealing putative zoonosis, anthroponosis, and amphizoonosis Cladistics. 36: 358-373. DOI: 10.1111/Cla.12422  0.376
2019 Ashrafali MI, Zhou X, Dyer DW, Seto D, Rajaiya J, Chodosh J. Genomic foundations of evolution and ocular pathogenesis in human adenovirus species D. Febs Letters. PMID 31769017 DOI: 10.1002/1873-3468.13693  0.319
2019 Dehghan S, Seto J, Liu EB, Ismail AM, Madupu R, Heim A, Jones MS, Dyer DW, Chodosh J, Seto D. A zoonotic adenoviral human pathogen emerged through genomic recombination amongst human and nonhuman simian hosts. Journal of Virology. PMID 31243128 DOI: 10.1128/Jvi.00564-19  0.384
2019 Singh G, Ismail AM, Lee JY, Ramke M, Lee JS, Dyer DW, Seto D, Rajaiya J, Chodosh J. Divergent Evolution of E1A CR3 in Human Adenovirus Species D. Viruses. 11. PMID 30744049 DOI: 10.3390/V11020143  0.356
2018 Ismail AM, Lee JS, Lee JY, Singh G, Dyer DW, Seto D, Chodosh J, Rajaiya J. Corrigendum: Adenoviromics: Mining the Human Adenovirus Species D Genome. Frontiers in Microbiology. 9: 3005. PMID 30555456 DOI: 10.3389/Fmicb.2018.03005  0.31
2018 Ismail AM, Lee JS, Lee JY, Singh G, Dyer DW, Seto D, Chodosh J, Rajaiya J. Adenoviromics: Mining the Human Adenovirus Species D Genome. Frontiers in Microbiology. 9: 2178. PMID 30254627 DOI: 10.3389/Fmicb.2018.02178  0.361
2018 Lee JY, Lee JS, Materne EC, Rajala R, Ismail AM, Seto D, Dyer DW, Rajaiya J, Chodosh J. Bacterial RecA Protein Promotes Adenoviral Recombination during Infection. Msphere. 3. PMID 29925671 DOI: 10.1128/mSphere.00105-18  0.306
2018 Ismail AM, Cui T, Dommaraju K, Singh G, Dehghan S, Seto J, Shrivastava S, Fedorova NB, Gupta N, Stockwell TB, Madupu R, Heim A, Kajon AE, Romanowski EG, Kowalski RP, ... ... Dyer DW, et al. Genomic analysis of a large set of currently-and historically-important human adenovirus pathogens. Emerging Microbes & Infections. 7: 10. PMID 29410402 DOI: 10.1038/S41426-017-0004-Y  0.405
2017 Cole BK, Scott E, Ilikj M, Bard D, Akins DR, Dyer DW, Chavez-Bueno S. Route of infection alters virulence of neonatal septicemia Escherichia coli clinical isolates. Plos One. 12: e0189032. PMID 29236742 DOI: 10.1371/Journal.Pone.0189032  0.331
2017 Jackson LA, Day M, Allen J, Scott E, Dyer DW. Iron-regulated small RNA expression as Neisseria gonorrhoeae FA 1090 transitions into stationary phase growth. Bmc Genomics. 18: 317. PMID 28431495 DOI: 10.1186/S12864-017-3684-8  0.389
2017 Ramke M, Lee JY, Dyer DW, Seto D, Rajaiya J, Chodosh J. The 5'UTR in human adenoviruses: leader diversity in late gene expression. Scientific Reports. 7: 618. PMID 28377580 DOI: 10.1038/S41598-017-00747-Y  0.343
2016 Ismail AM, Lee J, Dyer DW, Seto D, Rajaiya J, Chodosh J. Selection pressure in the human adenovirus fiber knob drives cell specificity in epidemic keratoconjunctivitis. Journal of Virology. PMID 27512073 DOI: 10.1128/Jvi.01010-16  0.348
2015 Singh G, Zhou X, Lee JY, Yousuf MA, Ramke M, Ismail AM, Lee JS, Robinson CM, Seto D, Dyer DW, Jones MS, Rajaiya J, Chodosh J. Recombination of the epsilon determinant and corneal tropism: Human adenovirus species D types 15, 29, 56, and 69. Virology. 485: 452-459. PMID 26343864 DOI: 10.1016/J.Virol.2015.08.018  0.328
2015 Day MW, Jackson LA, Akins DR, Dyer DW, Chavez-Bueno S. Whole-Genome Sequences of the Archetypal K1 Escherichia coli Neonatal Isolate RS218 and Contemporary Neonatal Bacteremia Clinical Isolates SCB11, SCB12, and SCB15. Genome Announcements. 3. PMID 25720688 DOI: 10.1128/Genomea.01598-14  0.328
2014 Toby IT, Widmer J, Dyer DW. Divergence of protein-coding capacity and regulation in the Bacillus cereus sensu lato group. Bmc Bioinformatics. 15: S8. PMID 25350501 DOI: 10.1186/1471-2105-15-S11-S8  0.327
2014 Day M, Ibrahim M, Dyer D, Bulla L. Genome Sequence of Bacillus thuringiensis subsp. kurstaki Strain HD-1. Genome Announcements. 2. PMID 25035322 DOI: 10.1128/Genomea.00613-14  0.344
2014 Chavez-Bueno S, Day MW, Toby IT, Akins DR, Dyer DW. Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis. Genome Announcements. 2. PMID 24926049 DOI: 10.1128/Genomea.00514-14  0.326
2013 Dehghan S, Seto J, Jones MS, Dyer DW, Chodosh J, Seto D. Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen. Virology. 447: 265-73. PMID 24210123 DOI: 10.1016/J.Virol.2013.09.009  0.378
2013 Seto D, Jones MS, Dyer DW, Chodosh J. Characterizing, typing, and naming human adenovirus type 55 in the era of whole genome data. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 58: 741-2. PMID 24161575 DOI: 10.1016/J.Jcv.2013.09.025  0.311
2013 Jackson LA, Pan JC, Day MW, Dyer DW. Control of RNA stability by NrrF, an iron-regulated small RNA in Neisseria gonorrhoeae. Journal of Bacteriology. 195: 5166-73. PMID 24039262 DOI: 10.1128/Jb.00839-13  0.4
2013 Singh G, Robinson CM, Dehghan S, Jones MS, Dyer DW, Seto D, Chodosh J. Homologous recombination in E3 genes of human adenovirus species D. Journal of Virology. 87: 12481-8. PMID 24027303 DOI: 10.1128/Jvi.01927-13  0.376
2013 Dehghan S, Seto J, Liu EB, Walsh MP, Dyer DW, Chodosh J, Seto D. Computational analysis of four human adenovirus type 4 genomes reveals molecular evolution through two interspecies recombination events. Virology. 443: 197-207. PMID 23763770 DOI: 10.1016/J.Virol.2013.05.014  0.391
2013 Robinson CM, Singh G, Lee JY, Dehghan S, Rajaiya J, Liu EB, Yousuf MA, Betensky RA, Jones MS, Dyer DW, Seto D, Chodosh J. Molecular evolution of human adenoviruses. Scientific Reports. 3: 1812. PMID 23657240 DOI: 10.1038/Srep01812  0.362
2013 Robinson CM, Zhou X, Rajaiya J, Yousuf MA, Singh G, DeSerres JJ, Walsh MP, Wong S, Seto D, Dyer DW, Chodosh J, Jones MS. Predicting the next eye pathogen: analysis of a novel adenovirus. Mbio. 4: e00595-12. PMID 23572555 DOI: 10.1128/Mbio.00595-12  0.34
2012 Scott E, Dyer DW. Divergence of the SigB regulon and pathogenesis of the Bacillus cereus sensu lato group. Bmc Genomics. 13: 564. PMID 23088190 DOI: 10.1186/1471-2164-13-564  0.309
2012 Tekedar HC, Karsi A, Gillaspy AF, Dyer DW, Benton NR, Zaitshik J, Vamenta S, Banes MM, Gülsoy N, Aboko-Cole M, Waldbieser GC, Lawrence ML. Genome sequence of the fish pathogen Flavobacterium columnare ATCC 49512. Journal of Bacteriology. 194: 2763-4. PMID 22535941 DOI: 10.1128/Jb.00281-12  0.344
2012 Zhou X, Robinson CM, Rajaiya J, Dehghan S, Seto D, Jones MS, Dyer DW, Chodosh J. Analysis of human adenovirus type 19 associated with epidemic keratoconjunctivitis and its reclassification as adenovirus type 64. Investigative Ophthalmology & Visual Science. 53: 2804-11. PMID 22467570 DOI: 10.1167/Iovs.12-9656  0.307
2012 Liu EB, Wadford DA, Seto J, Vu M, Hudson NR, Thrasher L, Torres S, Dyer DW, Chodosh J, Seto D, Jones MS. Computational and serologic analysis of novel and known viruses in species human adenovirus D in which serology and genomics do not correlate. Plos One. 7: e33212. PMID 22427992 DOI: 10.1371/Journal.Pone.0033212  0.336
2012 Singh G, Robinson CM, Dehghan S, Schmidt T, Seto D, Jones MS, Dyer DW, Chodosh J. Overreliance on the hexon gene, leading to misclassification of human adenoviruses. Journal of Virology. 86: 4693-5. PMID 22301156 DOI: 10.1128/Jvi.06969-11  0.38
2012 Williams ML, Gillaspy AF, Dyer DW, Thune RL, Waldbieser GC, Schuster SC, Gipson J, Zaitshik J, Landry C, Banes MM, Lawrence ML. Genome sequence of Edwardsiella ictaluri 93-146, a strain associated with a natural channel catfish outbreak of enteric septicemia of catfish. Journal of Bacteriology. 194: 740-1. PMID 22247535 DOI: 10.1128/Jb.06522-11  0.339
2012 Mercante AD, Jackson L, Johnson PJ, Stringer VA, Dyer DW, Shafer WM. MpeR regulates the mtr efflux locus in Neisseria gonorrhoeae and modulates antimicrobial resistance by an iron-responsive mechanism. Antimicrobial Agents and Chemotherapy. 56: 1491-501. PMID 22214775 DOI: 10.1128/Aac.06112-11  0.415
2012 Dehghan S, Liu EB, Seto J, Torres SF, Hudson NR, Kajon AE, Metzgar D, Dyer DW, Chodosh J, Jones MS, Seto D. Five genome sequences of subspecies B1 human adenoviruses associated with acute respiratory disease. Journal of Virology. 86: 635-6. PMID 22158846 DOI: 10.1128/Jvi.06593-11  0.373
2011 Mullins MA, Register KB, Bayles DO, Dyer DW, Kuehn JS, Phillips GJ. Genome sequence of Haemophilus parasuis strain 29755. Standards in Genomic Sciences. 5: 61-8. PMID 22180811 DOI: 10.4056/Sigs.2245029  0.35
2011 Siddaramappa S, Challacombe JF, Duncan AJ, Gillaspy AF, Carson M, Gipson J, Orvis J, Zaitshik J, Barnes G, Bruce D, Chertkov O, Detter JC, Han CS, Tapia R, Thompson LS, ... Dyer DW, et al. Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses. Bmc Genomics. 12: 570. PMID 22111657 DOI: 10.1186/1471-2164-12-570  0.394
2011 Dehghan S, Seto J, Hudson NR, Robinson CM, Jones MS, Dyer DW, Chodosh J, Seto D. Complete genome sequence of human adenovirus prototype 17. Journal of Virology. 85: 11540-1. PMID 21980031 DOI: 10.1128/Jvi.06051-11  0.37
2011 Liu EB, Ferreyra L, Fischer SL, Pavan JV, Nates SV, Hudson NR, Tirado D, Dyer DW, Chodosh J, Seto D, Jones MS. Genetic analysis of a novel human adenovirus with a serologically unique hexon and a recombinant fiber gene. Plos One. 6: e24491. PMID 21915339 DOI: 10.1371/Journal.Pone.0024491  0.375
2011 Schmidt TR, Scott EJ, Dyer DW. Whole-genome phylogenies of the family Bacillaceae and expansion of the sigma factor gene family in the Bacillus cereus species-group. Bmc Genomics. 12: 430. PMID 21864360 DOI: 10.1186/1471-2164-12-430  0.35
2011 Walsh MP, Seto J, Liu EB, Dehghan S, Hudson NR, Lukashev AN, Ivanova O, Chodosh J, Dyer DW, Jones MS, Seto D. Computational analysis of two species C human adenoviruses provides evidence of a novel virus. Journal of Clinical Microbiology. 49: 3482-90. PMID 21849694 DOI: 10.1128/Jcm.00156-11  0.308
2011 Robinson CM, Rajaiya J, Zhou X, Singh G, Dyer DW, Chodosh J. The E3 CR1-gamma gene in human adenoviruses associated with epidemic keratoconjunctivitis. Virus Research. 160: 120-7. PMID 21683743 DOI: 10.1016/J.Virusres.2011.05.022  0.348
2011 Robinson CM, Seto D, Jones MS, Dyer DW, Chodosh J. Molecular evolution of human species D adenoviruses. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 11: 1208-17. PMID 21570490 DOI: 10.1016/J.Meegid.2011.04.031  0.321
2011 Kolb AW, Schmidt TR, Dyer DW, Brandt CR. Sequence variation in the herpes simplex virus U(S)1 ocular virulence determinant. Investigative Ophthalmology & Visual Science. 52: 4630-8. PMID 21519032 DOI: 10.1167/Iovs.10-7032  0.358
2011 Robinson CM, Singh G, Henquell C, Walsh MP, Peigue-Lafeuille H, Seto D, Jones MS, Dyer DW, Chodosh J. Computational analysis and identification of an emergent human adenovirus pathogen implicated in a respiratory fatality. Virology. 409: 141-7. PMID 21056888 DOI: 10.1016/J.Virol.2010.10.020  0.325
2010 Jackson LA, Ducey TF, Day MW, Zaitshik JB, Orvis J, Dyer DW. Transcriptional and functional analysis of the Neisseria gonorrhoeae Fur regulon. Journal of Bacteriology. 192: 77-85. PMID 19854902 DOI: 10.1128/Jb.00741-09  0.699
2009 Mullins MA, Register KB, Bayles DO, Loving CL, Nicholson TL, Brockmeier SL, Dyer DW, Phillips GJ. Characterization and comparative analysis of the genes encoding Haemophilus parasuis outer membrane proteins P2 and P5. Journal of Bacteriology. 191: 5988-6002. PMID 19633080 DOI: 10.1128/Jb.00469-09  0.323
2009 Robinson CM, Rajaiya J, Walsh MP, Seto D, Dyer DW, Jones MS, Chodosh J. Computational analysis of human adenovirus type 22 provides evidence for recombination among species D human adenoviruses in the penton base gene. Journal of Virology. 83: 8980-5. PMID 19553309 DOI: 10.1128/Jvi.00786-09  0.378
2009 Ducey TF, Jackson L, Orvis J, Dyer DW. Transcript analysis of nrrF, a Fur repressed sRNA of Neisseria gonorrhoeae. Microbial Pathogenesis. 46: 166-70. PMID 19162160 DOI: 10.1016/J.Micpath.2008.12.003  0.672
2009 Robinson CM, Shariati F, Zaitshik J, Gillaspy AF, Dyer DW, Chodosh J. Human adenovirus type 19: genomic and bioinformatics analysis of a keratoconjunctivitis isolate. Virus Research. 139: 122-6. PMID 19000724 DOI: 10.1016/J.Virusres.2008.10.001  0.417
2009 Folster JP, Johnson PJ, Jackson L, Dhulipali V, Dyer DW, Shafer WM. MtrR modulates rpoH expression and levels of antimicrobial resistance in Neisseria gonorrhoeae. Journal of Bacteriology. 191: 287-97. PMID 18978065 DOI: 10.1128/Jb.01165-08  0.37
2009 Barua S, McKevitt M, DeGiusti K, Hamm EE, Larabee J, Shakir S, Bryant K, Koehler TM, Blanke SR, Dyer D, Gillaspy A, Ballard JD. The mechanism of Bacillus anthracis intracellular germination requires multiple and highly diverse genetic loci. Infection and Immunity. 77: 23-31. PMID 18936179 DOI: 10.1128/Iai.00801-08  0.343
2008 Robinson CM, Shariati F, Gillaspy AF, Dyer DW, Chodosh J. Genomic and bioinformatics analysis of human adenovirus type 37: new insights into corneal tropism. Bmc Genomics. 9: 213. PMID 18471294 DOI: 10.1186/1471-2164-9-213  0.344
2005 Ducey TF, Carson MB, Orvis J, Stintzi AP, Dyer DW. Identification of the iron-responsive genes of Neisseria gonorrhoeae by microarray analysis in defined medium. Journal of Bacteriology. 187: 4865-74. PMID 15995201 DOI: 10.1128/Jb.187.14.4865-4874.2005  0.694
2005 Harrison A, Dyer DW, Gillaspy A, Ray WC, Mungur R, Carson MB, Zhong H, Gipson J, Gipson M, Johnson LS, Lewis L, Bakaletz LO, Munson RS. Genomic sequence of an otitis media isolate of nontypeable Haemophilus influenzae: comparative study with H. influenzae serotype d, strain KW20. Journal of Bacteriology. 187: 4627-36. PMID 15968074 DOI: 10.1128/Jb.187.13.4627-4636.2005  0.349
2004 Kupfer DM, Drabenstot SD, Buchanan KL, Lai H, Zhu H, Dyer DW, Roe BA, Murphy JW. Introns and splicing elements of five diverse fungi. Eukaryotic Cell. 3: 1088-100. PMID 15470237 DOI: 10.1128/Ec.3.5.1088-1100.2004  0.34
2004 Munson RS, Harrison A, Gillaspy A, Ray WC, Carson M, Armbruster D, Gipson J, Gipson M, Johnson L, Lewis L, Dyer DW, Bakaletz LO. Partial analysis of the genomes of two nontypeable Haemophilus influenzae otitis media isolates. Infection and Immunity. 72: 3002-10. PMID 15102813 DOI: 10.1128/Iai.72.5.3002-3010.2004  0.397
2004 Rohde KH, Dyer DW. Analysis of haptoglobin and hemoglobin-haptoglobin interactions with the Neisseria meningitidis TonB-dependent receptor HpuAB by flow cytometry. Infection and Immunity. 72: 2494-506. PMID 15102756 DOI: 10.1128/Iai.72.5.2494-2506.2004  0.659
2003 Drabenstot SD, Kupfer DM, White JD, Dyer DW, Roe BA, Buchanan KL, Murphy JW. FELINES: a utility for extracting and examining EST-defined introns and exons. Nucleic Acids Research. 31: e141. PMID 14602934 DOI: 10.1093/Nar/Gng141  0.326
2003 Rohde KH, Dyer DW. Mechanisms of iron acquisition by the human pathogens Neisseria meningitidis and Neisseria gonorrhoeae. Frontiers in Bioscience : a Journal and Virtual Library. 8: d1186-218. PMID 12957813 DOI: 10.2741/1133  0.673
2002 Rohde KH, Gillaspy AF, Hatfield MD, Lewis LA, Dyer DW. Interactions of haemoglobin with the Neisseria meningitidis receptor HpuAB: the role of TonB and an intact proton motive force. Molecular Microbiology. 43: 335-54. PMID 11985713 DOI: 10.1046/J.1365-2958.2002.02745.X  0.634
2001 Register KB, Ducey TF, Brockmeier SL, Dyer DW. Reduced virulence of a Bordetella bronchiseptica siderophore mutant in neonatal swine. Infection and Immunity. 69: 2137-43. PMID 11254568 DOI: 10.1128/Iai.69.4.2137-2143.2001  0.653
1999 Lewis LA, Gipson M, Hartman K, Ownbey T, Vaughn J, Dyer DW. Phase variation of HpuAB and HmbR, two distinct haemoglobin receptors of Neisseria meningitidis DNM2. Molecular Microbiology. 32: 977-89. PMID 10361300 DOI: 10.1046/J.1365-2958.1999.01409.X  0.324
1998 Lewis LA, Sung MH, Gipson M, Hartman K, Dyer DW. Transport of intact porphyrin by HpuAB, the hemoglobin-haptoglobin utilization system of Neisseria meningitidis. Journal of Bacteriology. 180: 6043-7. PMID 9811666 DOI: 10.1128/Jb.180.22.6043-6047.1998  0.304
1998 Lewis LA, Rohde K, Gipson M, Behrens B, Gray E, Toth SI, Roe BA, Dyer DW. Identification and molecular analysis of lbpBA, which encodes the two- component meningococcal lactoferrin receptor Infection and Immunity. 66: 3017-3023. PMID 9596785 DOI: 10.1128/Iai.66.6.3017-3023.1998  0.367
1997 Giardina PC, Foster LA, Toth SI, Bruce A R, Dyer DW. Analysis of the alcABC operon encoding alcaligin biosynthesis enzymes in Bordetella bronchiseptica Gene. 194: 19-24. PMID 9266668 DOI: 10.1016/S0378-1119(97)00094-2  0.39
1997 Lewis LA, Gray E, Wang YP, Roe BA, Dyer DW. Molecular characterization of hpuAB, the haemoglobin-haptoglobin-utilization operon of Neisseria meningitidis Molecular Microbiology. 23: 737-749. PMID 9157245 DOI: 10.1046/J.1365-2958.1997.2501619.X  0.425
1996 Winston JL, Toth SI, Roe BA, Dyer DW. Cloning and characterization of the Actinobacillus actinomycetemcomitans gene encoding a heat-shock protein 90 homologue Gene. 179: 199-204. PMID 8972900 DOI: 10.1016/S0378-1119(96)00317-4  0.386
1995 Giardina PC, Foster LA, Toth SI, Roe BA, Dyer DW. Identification of alcA, a Bordetella bronchiseptica gene necessary for alcaligin production Gene. 167: 133-136. PMID 8566764 DOI: 10.1016/0378-1119(95)00659-1  0.41
1995 Giardina PC, Foster LA, Musser JM, Akerley BJ, Miller JF, Dyer DW. bvg Repression of alcaligin synthesis in Bordetella bronchiseptica is associated with phylogenetic lineage Journal of Bacteriology. 177: 6058-6063. PMID 7592367 DOI: 10.1128/Jb.177.21.6058-6063.1995  0.392
1994 Campagnari AA, Shanks KL, Dyer DW. Growth of Moraxella catarrhalis with human transferrin and lactoferrin: Expression of iron-repressible proteins without siderophore production Infection and Immunity. 62: 4909-4914. PMID 7927771 DOI: 10.1128/Iai.62.11.4909-4914.1994  0.389
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