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Mark A. Saper - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Biochemistry
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23/57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Larson MR, Biddle K, Gorman A, Boutom S, Rosenshine I, Saper MA. Escherichia coli O127 group 4 capsule proteins assemble at the outer membrane. Plos One. 16: e0259900. PMID 34780538 DOI: 10.1371/journal.pone.0259900  0.334
2020 Shin JH, Sulpizio AG, Kelley A, Alvarez L, Murphy SG, Fan L, Cava F, Mao Y, Saper MA, Dörr T. Structural basis of peptidoglycan endopeptidase regulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 32393643 DOI: 10.1073/pnas.2001661117  0.391
2019 Heiss C, Wang Z, Thurlow CM, Hossain MJ, Sun D, Liles MR, Saper MA, Azadi P. Structure of the capsule and lipopolysaccharide O-antigen from the channel catfish pathogen, Aeromonas hydrophila. Carbohydrate Research. 486: 107858. PMID 31683071 DOI: 10.1016/J.Carres.2019.107858  0.333
2019 Liepman AH, Vijayalakshmi J, Peisach D, Hulsebus B, Olsen LJ, Saper MA. Crystal Structure Of Photorespiratory Alanine:Glyoxylate Aminotransferase 1 (AGT1) From . Frontiers in Plant Science. 10: 1229. PMID 31681359 DOI: 10.3389/Fpls.2019.01229  0.413
2019 Kelley A, Vijayalakshmi J, Saper MA. Crystal structures of the amino-terminal domain of LpoA from Escherichia coli and Haemophilus influenzae. Acta Crystallographica. Section F, Structural Biology Communications. 75: 368-376. PMID 31045566 DOI: 10.1107/S2053230X19004011  0.377
2018 Saper MA, Sathiyamoorthy K, Vijayalakshmi J, Tirupati B, Fan L. Conformational changes in the peptidoglycan synthase activator LpoA are likely important for maintaining a viable cell wall in Gram-negative bacteria Acta Crystallographica Section a Foundations and Advances. 74: a20-a20. DOI: 10.1107/S0108767318099798  0.555
2017 Sathiyamoorthy K, Vijayalakshmi J, Tirupati B, Fan L, Saper MA. Structural analyses of the Haemophilus influenzae peptidoglycan synthase activator LpoA suggest multiple conformations in solution. The Journal of Biological Chemistry. PMID 28887305 DOI: 10.1074/Jbc.M117.804997  0.6
2012 Nadler C, Koby S, Peleg A, Johnson AC, Suddala KC, Sathiyamoorthy K, Smith BE, Saper MA, Rosenshine I. Cycling of Etk and Etp phosphorylation states is involved in formation of group 4 capsule by Escherichia coli. Plos One. 7: e37984. PMID 22675501 DOI: 10.1371/Journal.Pone.0037984  0.557
2011 Rojviriya C, Pratumrat T, Saper MA, Yuvaniyama J. Improved X-ray diffraction from Bacillus megaterium penicillin G acylase crystals through long cryosoaking dehydration. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 1570-4. PMID 22139169 DOI: 10.1107/S1744309111040462  0.344
2011 Sathiyamoorthy K, Mills E, Franzmann TM, Rosenshine I, Saper MA. The crystal structure of Escherichia coli group 4 capsule protein GfcC reveals a domain organization resembling that of Wza. Biochemistry. 50: 5465-76. PMID 21449614 DOI: 10.1021/Bi101869H  0.614
2008 Vijayalakshmi J, Akerley BJ, Saper MA. Structure of YraM, a protein essential for growth of Haemophilus influenzae. Proteins. 73: 204-17. PMID 18412262 DOI: 10.1002/Prot.22033  0.425
2005 Peleg A, Shifrin Y, Ilan O, Nadler-Yona C, Nov S, Koby S, Baruch K, Altuvia S, Elgrably-Weiss M, Abe CM, Knutton S, Saper MA, Rosenshine I. Identification of an Escherichia coli operon required for formation of the O-antigen capsule. Journal of Bacteriology. 187: 5259-66. PMID 16030220 DOI: 10.1128/Jb.187.15.5259-5266.2005  0.347
2005 Ivanov MI, Stuckey JA, Schubert HL, Saper MA, Bliska JB. Two substrate-targeting sites in the Yersinia protein tyrosine phosphatase co-operate to promote bacterial virulence. Molecular Microbiology. 55: 1346-56. PMID 15720545 DOI: 10.1111/J.1365-2958.2005.04477.X  0.336
2002 Khandelwal P, Keliikuli K, Smith CL, Saper MA, Zuiderweg ER. Solution structure and phosphopeptide binding to the N-terminal domain of Yersinia YopH: comparison with a crystal structure. Biochemistry. 41: 11425-37. PMID 12234185 DOI: 10.1021/bi026333l  0.389
2001 Smith CL, Khandelwal P, Keliikuli K, Zuiderweg ER, Saper MA. Structure of the type III secretion and substrate-binding domain of Yersinia YopH phosphatase. Molecular Microbiology. 42: 967-79. PMID 11737640 DOI: 10.1046/j.0950-382X.2001.02711.x  0.356
2001 Khandelwal P, Keliikuli K, Smit CL, Saper MA, Zuiderweg ER. 1H, 15N and 13C assignments of the N-terminal domain of Yersinia outer protein H in its apo form and in complex with a phosphotyrosine peptide. Journal of Biomolecular Nmr. 21: 69-70. PMID 11693571 DOI: 10.1023/A:1011971202626  0.322
1998 Fauman EB, Cogswell JP, Lovejoy B, Rocque WJ, Holmes W, Montana VG, Piwnica-Worms H, Rink MJ, Saper MA. Crystal structure of the catalytic domain of the human cell cycle control phosphatase, Cdc25A. Cell. 93: 617-25. PMID 9604936 DOI: 10.1016/S0092-8674(00)81190-3  0.391
1996 Yuvaniyama J, Denu JM, Dixon JE, Saper MA. Crystal structure of the dual specificity protein phosphatase VHR. Science (New York, N.Y.). 272: 1328-31. PMID 8650541 DOI: 10.1126/Science.272.5266.1328  0.324
1995 Schubert HL, Fauman EB, Stuckey JA, Dixon JE, Saper MA. A ligand-induced conformational change in the Yersinia protein tyrosine phosphatase Protein Science. 4: 1904-1913. PMID 8528087 DOI: 10.1002/Pro.5560040924  0.321
1994 Stuckey JA, Schubert HL, Fauman EB, Zhang ZY, Dixon JE, Saper MA. Crystal structure of Yersinia protein tyrosine phosphatase at 2.5 Å and the complex with tungstate Nature. 370: 571-575. PMID 8052312 DOI: 10.1038/370571A0  0.417
1994 Zhang ZY, Wang Y, Wu L, Fauman EB, Stuckey JA, Schubert HL, Saper MA, Dixon JE. The Cys(X)5Arg catalytic motif in phosphoester hydrolysis Biochemistry. 33: 15266-15270. PMID 7803389 DOI: 10.1021/Bi00255A007  0.312
1989 Sack JS, Saper MA, Quiocho FA. Periplasmic binding protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine-binding protein and its complex with leucine. Journal of Molecular Biology. 206: 171-91. PMID 2649682 DOI: 10.1016/0022-2836(89)90531-7  0.367
1983 Saper MA, Quiocho FA. Leucine, isoleucine, valine-binding protein from Escherichia coli. Structure at 3.0-A resolution and location of the binding site Journal of Biological Chemistry. 258: 11057-11062. PMID 6350301  0.33
Low-probability matches (unlikely to be authored by this person)
1996 Fauman EB, Saper MA. Structure and function of the protein tyrosine phosphatases Trends in Biochemical Sciences. 21: 413-417. PMID 8987394 DOI: 10.1016/S0968-0004(96)10059-1  0.287
1996 Fauman EB, Yuvaniyama C, Schubert HL, Stuckey JA, Saper MA. The x-ray crystal structures of Yersinia tyrosine phosphatase with bound tungstate and nitrate. Mechanistic implications Journal of Biological Chemistry. 271: 18780-18788. PMID 8702535 DOI: 10.1074/jbc.271.31.18780  0.284
1984 Saper MA, Quiocho FA. Structure of leucine, isoleucine, valine-binding protein fromE. coliat 2.8 Å resolution Acta Crystallographica Section a Foundations of Crystallography. 40: C31-C31. DOI: 10.1107/S0108767384098883  0.269
1988 Ajitkumar P, Geier SS, Kesari KV, Borriello F, Nakagawa M, Bluestone JA, Saper MA, Wiley DC, Nathenson SG. Evidence that multiple residues on both the α-helices of the class I MHC molecule are simultaneously recognized by the T cell receptor Cell. 54: 47-56. PMID 3260136 DOI: 10.1016/0092-8674(88)90178-X  0.255
1996 Denu JM, Lohse DL, Vijayalakshmi J, Saper MA, Dixon JE. Visualization of intermediate and transition-state structures in protein-tyrosine phosphatase catalysis. Proceedings of the National Academy of Sciences of the United States of America. 93: 2493-8. PMID 8637902 DOI: 10.1073/Pnas.93.6.2493  0.247
1992 Zhang ZY, Clemens JC, Schubert HL, Stuckey JA, Fischer MWF, Hume DM, Saper MA, Dixon JE. Expression, purification, and physicochemical characterization of a recombinant Yersinia protein tyrosine phosphatase Journal of Biological Chemistry. 267: 23759-23766. PMID 1429715  0.239
1996 Denu JM, Lohse D, Yuvaniyama J, Saper MA, Dixon JE. Structure and function of protein tyrosine phosphatases Faseb Journal. 10: A968.  0.237
1991 Saper MA, Bjorkman PJ, Wiley DC. Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution. Journal of Molecular Biology. 219: 277-319. PMID 2038058 DOI: 10.1016/0022-2836(91)90567-P  0.231
1985 Quiocho FA, Vyas NK, Pflugrath JW, Saper MA, Vyas MN, Sack JS. Novel tertiary structures and stereospecificities of periplasmic binding proteins involved in active transport and chemotaxis Journal of Biosciences. 8: 461-470. DOI: 10.1007/BF02703997  0.227
1995 Denu JM, Zhou G, Wu L, Zhao R, Yuvaniyama J, Saper MA, Dixon JE. The purification and characterization of a human dual-specific protein tyrosine phosphatase. The Journal of Biological Chemistry. 270: 3796-803. PMID 7876121 DOI: 10.1074/Jbc.270.8.3796  0.226
2019 Thurlow CM, Hossain MJ, Sun D, Barger P, Foshee L, Beck BH, Newton JC, Terhune JS, Saper MA, Liles MR. The gfc operon is involved in the formation of the O antigen capsule in Aeromonas hydrophila and contributes to virulence in channel catfish Aquaculture. 512: 734334. DOI: 10.1016/J.Aquaculture.2019.734334  0.216
2000 Staker BL, Korber P, Bardwell JC, Saper MA. Structure of Hsp15 reveals a novel RNA-binding motif. The Embo Journal. 19: 749-57. PMID 10675344 DOI: 10.1093/Emboj/19.4.749  0.214
1996 Yuvaniyama J, Denu JM, Dixon JE, Saper MA. Crystal structure of VHR, a dual-specificity phosphatase Faseb Journal. 10: A989.  0.207
1986 Yonath A, Saper MA, Frolow F, Makowski I, Wittmann HG. Characterization of single crystals of the large ribosomal particles from a mutant of Bacillus stearothermophilus Journal of Molecular Biology. 192: 161-162. PMID 3820303 DOI: 10.1016/0022-2836(86)90473-0  0.203
1987 Saper MA, Lis H, Sharon N, Shaanan B. Crystallization and preliminary X-ray diffraction studies of the lectin from Erythrina corallodendron Journal of Molecular Biology. 193: 823-824. PMID 3612795 DOI: 10.1016/0022-2836(87)90363-9  0.203
2000 Bügl H, Fauman EB, Staker BL, Zheng F, Kushner SR, Saper MA, Bardwell JC, Jakob U. RNA methylation under heat shock control. Molecular Cell. 6: 349-60. PMID 10983982 DOI: 10.1016/S1097-2765(00)00035-6  0.197
1996 Denu JM, Stuckey JA, Saper MA, Dixon JE. Form and function in protein dephosphorylation. Cell. 87: 361-4. PMID 8898189 DOI: 10.1016/S0092-8674(00)81356-2  0.197
1987 Bjorkman PJ, Saper MA, Samraoui B, Bennett WS, Strominger JL, Wiley DC. Structure of the human class I histocompatibility antigen, HLA-A2. Nature. 329: 506-12. PMID 3309677 DOI: 10.1038/329506A0  0.191
1987 Makowski I, Frolow F, Saper MA, Shoham M, Wittmann HG, Yonath A. Single crystals of large ribosomal particles from Halobacterium marismortui diffract to 6 A. Journal of Molecular Biology. 193: 819-22. PMID 3612794 DOI: 10.1016/0022-2836(87)90362-7  0.188
2001 Graumann J, Lilie H, Tang X, Tucker KA, Hoffmann JH, Vijayalakshmi J, Saper M, Bardwell JC, Jakob U. Activation of the redox-regulated molecular chaperone Hsp33--a two-step mechanism. Structure (London, England : 1993). 9: 377-87. PMID 11377198 DOI: 10.1016/S0969-2126(01)00599-8  0.187
1986 Yonath A, Saper MA, Makowski I, Müssig J, Piefke J, Bartunik HD, Bartels KS, Wittmann HG. Characterization of single crystals of the large ribosomal particles from Bacillus stearothermophilus Journal of Molecular Biology. 187: 633-636. PMID 3712439 DOI: 10.1016/0022-2836(86)90342-6  0.181
1997 Saper MA, Viiavalakshmi J, Yuvmiivama C, Yuvaniyaivia, Fauman EB. Catalytic intermediates of tyrosine and dual-specificity phosphatases Faseb Journal. 11.  0.177
1989 Garrett TP, Saper MA, Bjorkman PJ, Strominger JL, Wiley DC. Specificity pockets for the side chains of peptide antigens in HLA-Aw68. Nature. 342: 692-6. PMID 2594067 DOI: 10.1038/342692A0  0.167
2001 Vijayalakshmi J, Mukhergee MK, Graumann J, Jakob U, Saper MA. The 2.2 Å crystal structure of Hsp33: A heat shock protein with redox-regulated chaperone activity Structure. 9: 367-375. PMID 11377197 DOI: 10.1016/S0969-2126(01)00597-4  0.166
1988 Brown JH, Jardetzky T, Saper MA, Samraoui B, Bjorkman PJ, Wiley DC. A hypothetical model of the foreign antigen binding site of class II histocompatibility molecules. Nature. 332: 845-50. PMID 3258651 DOI: 10.1038/332845A0  0.156
1997 Transue TR, Smith AK, Mo H, Goldstein IJ, Saper MA. Structure of benzyl T-antigen disaccharide bound to Amaranthus caudatus agglutinin. Nature Structural Biology. 4: 779-83. PMID 9334739 DOI: 10.1038/Nsb1097-779  0.155
1992 Latron F, Pazmany L, Morrison J, Moots R, Saper MA, McMichael A, Strominger JL. A critical role for conserved residues in the cleft of HLA-A2 in presentation of a nonapeptide to T cells Science. 257: 964-967. PMID 1380181 DOI: 10.1126/Science.1380181  0.138
1989 Madden DR, Saper MA, Garrett TP, Bjorkman PJ, Strominger JL, Wiley DC. Comparison of orthorhombic and monoclinic crystal structures of HLA-A2. Cold Spring Harbor Symposia On Quantitative Biology. 54: 353-9. PMID 2639758 DOI: 10.1101/Sqb.1989.054.01.043  0.13
1989 Garrett TP, Saper MA, Samraoui B, Bjorkman PJ, Wiley DC. Structure/function studies of major histocompatibility antigens. Transplantation Proceedings. 21: 588-90. PMID 2650202  0.119
1986 Saper MA, Eldar H, Mizuuchi K, Nickol J, Appella E, Sussman JL. Crystallization of a DNA tridecamer d(C-G-C-A-G-A-A-T-T-C-G-C-G). Journal of Molecular Biology. 188: 111-3. PMID 3712441 DOI: 10.1016/0022-2836(86)90487-0  0.119
1987 Bjorkman PJ, Saper MA, Samraoui B, Bennett WS, Strominger JL, Wiley DC. The foreign antigen binding site and T cell recognition regions of class I histocompatibility antigens. Nature. 329: 512-8. PMID 2443855 DOI: 10.1038/329512A0  0.083
1976 Varga JM, Saper MA, Lerner AB, Fritsch P. Nonrandom distribution of receptors for melanocyte stimulating hormone on the surface of mouse melanoma cells Journal of Supramolecular and Cellular Biochemistry. 4: 45-49. PMID 176535  0.055
1983 Pflugrath J, Saper M, Quiocho F. Molecular modelling with the PS 300: a new generation graphics display system Journal of Molecular Graphics. 1: 53-54. DOI: 10.1016/0263-7855(83)80020-4  0.033
2005 Bjorkman PJ, Saper MA, Samraoui B, Bennett WS, Strominger JL, Wiley DC. Structure of the human class I histocompatibility antigen, HLA-A2. Journal of Immunology (Baltimore, Md. : 1950). 174: 6-19. PMID 15622565  0.032
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