Trevor Charles - Publications

Affiliations: 
McGill University, Montreal, QC, Canada 
Area:
Microbiology Biology, Biochemistry

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Tran TT, Charles TC. Lactic acid containing polymers produced in engineered Sinorhizobium meliloti and Pseudomonas putida. Plos One. 15: e0218302. PMID 32191710 DOI: 10.1371/journal.pone.0218302  1
2019 Brumwell SL, MacLeod MR, Huang T, Cochrane RR, Meaney RS, Zamani M, Matysiakiewicz O, Dan KN, Janakirama P, Edgell DR, Charles TC, Finan TM, Karas BJ. Designer Sinorhizobium meliloti strains and multi-functional vectors enable. Plos One. 14: e0206781. PMID 31206509 DOI: 10.1371/journal.pone.0206781  1
2019 Martinez AR, Heil JR, Charles TC. An engineered GFP fluorescent bacterial biosensor for detecting and quantifying silver and copper ions. Biometals : An International Journal On the Role of Metal Ions in Biology, Biochemistry, and Medicine. PMID 30756218 DOI: 10.1007/s10534-019-00179-3  1
2018 Lam KN, Martens EC, Charles TC. Developing aSystem for Function-Based Screening of DNA from the Human Gut Microbiome. Msystems. 3. PMID 29600285 DOI: 10.1128/mSystems.00195-17  1
2017 Heil JR, Lynch MDJ, Cheng J, Matysiakiewicz O, D'Alessio M, Charles TC. The Completed PacBio Single-Molecule Real-Time Sequence of Methylosinus trichosporium Strain OB3b Reveals the Presence of a Third Large Plasmid. Genome Announcements. 5. PMID 29217796 DOI: 10.1128/genomeA.01349-17  1
2017 Eckhard U, Bandukwala H, Mansfield MJ, Marino G, Cheng J, Wallace I, Holyoak T, Charles TC, Austin J, Overall CM, Doxey AC. Discovery of a proteolytic flagellin family in diverse bacterial phyla that assembles enzymatically active flagella. Nature Communications. 8: 521. PMID 28900095 DOI: 10.1038/s41467-017-00599-0  1
2017 Cheng J, Romantsov T, Engel K, Doxey AC, Rose DR, Neufeld JD, Charles TC. Functional metagenomics reveals novel β-galactosidases not predictable from gene sequences. Plos One. 12: e0172545. PMID 28273103 DOI: 10.1371/journal.pone.0172545  1
2017 Cheng J, Nordeste R, Trainer MA, Charles TC. Methods for the Isolation of Genes Encoding Novel PHA Metabolism Enzymes from Complex Microbial Communities. Methods in Molecular Biology (Clifton, N.J.). 1539: 237-248. PMID 27900694 DOI: 10.1007/978-1-4939-6691-2_15  1
2016 Srirangan K, Liu X, Tran TT, Charles TC, Moo-Young M, Chou CP. Engineering of Escherichia coli for direct and modulated biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) copolymer using unrelated carbon sources. Scientific Reports. 6: 36470. PMID 27819347 DOI: 10.1038/srep36470  1
2016 Cheng J, Charles TC. Novel polyhydroxyalkanoate copolymers produced in Pseudomonas putida by metagenomic polyhydroxyalkanoate synthases. Applied Microbiology and Biotechnology. PMID 27333909 DOI: 10.1007/s00253-016-7666-6  1
2016 Vey G, Charles TC. An analysis of the validity and utility of the proximon proposition. Functional & Integrative Genomics. 16: 215-20. PMID 26839085 DOI: 10.1007/s10142-016-0478-z  1
2015 Tran TT, Charles TC. Genome-engineered Sinorhizobium meliloti for the production of poly(lactic-co-3-hydroxybutyric) acid copolymer. Canadian Journal of Microbiology. 1-9. PMID 26639519 DOI: 10.1139/cjm-2015-0255  1
2015 Lam KN, Cheng J, Engel K, Neufeld JD, Charles TC. Current and future resources for functional metagenomics. Frontiers in Microbiology. 6: 1196. PMID 26579102 DOI: 10.3389/fmicb.2015.01196  1
2015 Lam KN, Charles TC. Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone libraries. Microbiome. 3: 22. PMID 26056565 DOI: 10.1186/s40168-015-0086-5  1
2014 Vey G, Charles TC. MetaProx: the database of metagenomic proximons. Database : the Journal of Biological Databases and Curation. 2014. PMID 25288655 DOI: 10.1093/database/bau097  1
2014 Lam KN, Hall MW, Engel K, Vey G, Cheng J, Neufeld JD, Charles TC. Evaluation of a pooled strategy for high-throughput sequencing of cosmid clones from metagenomic libraries. Plos One. 9: e98968. PMID 24911009 DOI: 10.1371/journal.pone.0098968  1
2014 Ali S, Charles TC, Glick BR. Amelioration of high salinity stress damage by plant growth-promoting bacterial endophytes that contain ACC deaminase. Plant Physiology and Biochemistry : Ppb / SociéTé FrançAise De Physiologie VéGéTale. 80: 160-7. PMID 24769617 DOI: 10.1016/j.plaphy.2014.04.003  1
2014 Ali S, Duan J, Charles TC, Glick BR. A bioinformatics approach to the determination of genes involved in endophytic behavior in Burkholderia spp. Journal of Theoretical Biology. 343: 193-8. PMID 24513137 DOI: 10.1016/j.jtbi.2013.10.007  1
2014 Cheng J, Pinnell L, Engel K, Neufeld JD, Charles TC. Versatile broad-host-range cosmids for construction of high quality metagenomic libraries. Journal of Microbiological Methods. 99: 27-34. PMID 24495694 DOI: 10.1016/j.mimet.2014.01.015  1
2013 Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, ... ... Charles TC, et al. Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, st. Jacobs, ontario, Canada. Standards in Genomic Sciences. 8: 106-11. PMID 23961315 DOI: 10.4056/sigs.3406845  1
2013 Bélanger L, Charles TC. Members of the Sinorhizobium meliloti ChvI regulon identified by a DNA binding screen. Bmc Microbiology. 13: 132. PMID 23758731 DOI: 10.1186/1471-2180-13-132  1
2012 Heil JR, Cheng J, Charles TC. Site-specific bacterial chromosome engineering: ΦC31 integrase mediated cassette exchange (IMCE). Journal of Visualized Experiments : Jove. PMID 22453661 DOI: 10.3791/3698  1
2012 Engel K, Pinnell L, Cheng J, Charles TC, Neufeld JD. Nonlinear electrophoresis for purification of soil DNA for metagenomics. Journal of Microbiological Methods. 88: 35-40. PMID 22056233 DOI: 10.1016/j.mimet.2011.10.007  1
2011 Schallmey M, Ly A, Wang C, Meglei G, Voget S, Streit WR, Driscoll BT, Charles TC. Harvesting of novel polyhydroxyalkanaote (PHA) synthase encoding genes from a soil metagenome library using phenotypic screening. Fems Microbiology Letters. 321: 150-6. PMID 21631577 DOI: 10.1111/j.1574-6968.2011.02324.x  1
2011 Heil JR, Nordeste RF, Charles TC. The fluorescence theatre: a cost-effective device using theatre gels for fluorescent protein and dye screening. Canadian Journal of Microbiology. 57: 339-42. PMID 21491986 DOI: 10.1139/w11-010  1
2011 Hao Y, Charles TC, Glick BR. ACC deaminase activity in avirulent Agrobacterium tumefaciens D3. Canadian Journal of Microbiology. 57: 278-86. PMID 21491979 DOI: 10.1139/w11-006  1
2010 Nordeste RF, Trainer MA, Charles TC. Methods for the isolation of genes encoding novel PHB cycle enzymes from complex microbial communities. Methods in Molecular Biology (Clifton, N.J.). 668: 235-46. PMID 20830568 DOI: 10.1007/978-1-60761-823-2_16  1
2010 Hao Y, Charles TC, Glick BR. ACC deaminase increases the Agrobacterium tumefaciens-mediated transformation frequency of commercial canola cultivars. Fems Microbiology Letters. 307: 185-90. PMID 20636976 DOI: 10.1111/j.1574-6968.2010.01977.x  1
2010 Trainer MA, Capstick D, Zachertowska A, Lam KN, Clark SR, Charles TC. Identification and characterization of the intracellular poly-3-hydroxybutyrate depolymerase enzyme PhaZ of Sinorhizobium meliloti. Bmc Microbiology. 10: 92. PMID 20346169 DOI: 10.1186/1471-2180-10-92  1
2010 Wang C, Kemp J, Da Fonseca IO, Equi RC, Sheng X, Charles TC, Sobral BW. Sinorhizobium meliloti 1021 loss-of-function deletion mutation in chvI and its phenotypic characteristics. Molecular Plant-Microbe Interactions : Mpmi. 23: 153-60. PMID 20064059 DOI: 10.1094/MPMI-23-2-0153  1
2010 Hao Y, Winans SC, Glick BR, Charles TC. Identification and characterization of new LuxR/LuxI-type quorum sensing systems from metagenomic libraries. Environmental Microbiology. 12: 105-17. PMID 19735279 DOI: 10.1111/j.1462-2920.2009.02049.x  1
2009 Bélanger L, Dimmick KA, Fleming JS, Charles TC. Null mutations in Sinorhizobium meliloti exoS and chvI demonstrate the importance of this two-component regulatory system for symbiosis. Molecular Microbiology. 74: 1223-37. PMID 19843226 DOI: 10.1111/j.1365-2958.2009.06931.x  1
2009 Lee KD, Gray EJ, Mabood F, Jung WJ, Charles T, Clark SR, Ly A, Souleimanov A, Zhou X, Smith DL. The class IId bacteriocin thuricin-17 increases plant growth. Planta. 229: 747-55. PMID 19083012 DOI: 10.1007/s00425-008-0870-6  1
2009 Duan J, Müller KM, Charles TC, Vesely S, Glick BR. 1-aminocyclopropane-1-carboxylate (ACC) deaminase genes in rhizobia from southern Saskatchewan. Microbial Ecology. 57: 423-36. PMID 18548183 DOI: 10.1007/s00248-008-9407-6  1
2008 Jacob AI, Adham SA, Capstick DS, Clark SR, Spence T, Charles TC. Mutational analysis of the Sinorhizobium meliloti short-chain dehydrogenase/reductase family reveals substantial contribution to symbiosis and catabolic diversity. Molecular Plant-Microbe Interactions : Mpmi. 21: 979-87. PMID 18533838 DOI: 10.1094/MPMI-21-7-0979  1
2007 Hao Y, Charles TC, Glick BR. ACC deaminase from plant growth-promoting bacteria affects crown gall development. Canadian Journal of Microbiology. 53: 1291-9. PMID 18059561 DOI: 10.1139/W07-099  1
2007 Wang C, Sheng X, Equi RC, Trainer MA, Charles TC, Sobral BW. Influence of the poly-3-hydroxybutyrate (PHB) granule-associated proteins (PhaP1 and PhaP2) on PHB accumulation and symbiotic nitrogen fixation in Sinorhizobium meliloti Rm1021. Journal of Bacteriology. 189: 9050-6. PMID 17921298 DOI: 10.1128/JB.01190-07  1
2007 Wang C, Saldanha M, Sheng X, Shelswell KJ, Walsh KT, Sobral BW, Charles TC. Roles of poly-3-hydroxybutyrate (PHB) and glycogen in symbiosis of Sinorhizobium meliloti with Medicago sp. Microbiology (Reading, England). 153: 388-98. PMID 17259610 DOI: 10.1099/mic.0.29214-0  1
2006 Bhathena J, Driscoll BT, Charles TC, Archibald FS. Effects of nitrogen and phosphorus limitation on the activated sludge biomass in a kraft mill biotreatment system. Water Environment Research : a Research Publication of the Water Environment Federation. 78: 2303-10. PMID 17243229 DOI: 10.2175/106143006X95401  1
2006 Trainer MA, Charles TC. The role of PHB metabolism in the symbiosis of rhizobia with legumes. Applied Microbiology and Biotechnology. 71: 377-86. PMID 16703322 DOI: 10.1007/s00253-006-0354-1  1
2006 Wang C, Meek DJ, Panchal P, Boruvka N, Archibald FS, Driscoll BT, Charles TC. Isolation of poly-3-hydroxybutyrate metabolism genes from complex microbial communities by phenotypic complementation of bacterial mutants. Applied and Environmental Microbiology. 72: 384-91. PMID 16391068 DOI: 10.1128/AEM.72.1.384-391.2006  1
2005 Mao C, Qiu J, Wang C, Charles TC, Sobral BW. NodMutDB: a database for genes and mutants involved in symbiosis. Bioinformatics (Oxford, England). 21: 2927-9. PMID 15817696 DOI: 10.1093/bioinformatics/bti427  1
2005 Aneja P, Charles TC. Characterization of bdhA, encoding the enzyme D-3-hydroxybutyrate dehydrogenase, from Sinorhizobium sp. strain NGR234. Fems Microbiology Letters. 242: 87-94. PMID 15621424 DOI: 10.1016/j.femsle.2004.10.043  1
2004 Aneja P, Dai M, Lacorre DA, Pillon B, Charles TC. Heterologous complementation of the exopolysaccharide synthesis and carbon utilization phenotypes of Sinorhizobium meliloti Rm1021 polyhydroxyalkanoate synthesis mutants. Fems Microbiology Letters. 239: 277-83. PMID 15476977 DOI: 10.1016/j.femsle.2004.08.045  1
2004 Ma W, Charles TC, Glick BR. Expression of an exogenous 1-aminocyclopropane-1-carboxylate deaminase gene in Sinorhizobium meliloti increases its ability to nodulate alfalfa. Applied and Environmental Microbiology. 70: 5891-7. PMID 15466529 DOI: 10.1128/AEM.70.10.5891-5897.2004  1
2003 Sukdeo N, Charles TC. Application of crossover-PCR-mediated deletion-insertion mutagenesis to analysis of the bdhA-xdhA2-xdhB2 mixed-function operon of Sinorhizobium meliloti. Archives of Microbiology. 179: 301-4. PMID 12632261 DOI: 10.1007/s00203-003-0532-9  1
2002 Li L, Jia Y, Hou Q, Charles TC, Nester EW, Pan SQ. A global pH sensor: Agrobacterium sensor protein ChvG regulates acid-inducible genes on its two chromosomes and Ti plasmid. Proceedings of the National Academy of Sciences of the United States of America. 99: 12369-74. PMID 12218184 DOI: 10.1073/pnas.192439499  1
2002 Aneja P, Dziak R, Cai GQ, Charles TC. Identification of an acetoacetyl coenzyme A synthetase-dependent pathway for utilization of L-(+)-3-hydroxybutyrate in Sinorhizobium meliloti. Journal of Bacteriology. 184: 1571-7. PMID 11872708 DOI: 10.1128/JB.184.6.1571-1577.2002  1
2001 Dumonceaux T, Bartholomew K, Valeanu L, Charles T, Archibald F. Cellobiose dehydrogenase is essential for wood invasion and nonessential for kraft pulp delignification by Trametes versicolor Enzyme and Microbial Technology. 29: 478-489. DOI: 10.1016/S0141-0229(01)00407-0  1
2000 Cai GQ, Driscoll BT, Charles TC. Requirement for the enzymes acetoacetyl coenzyme A synthetase and poly-3-hydroxybutyrate (PHB) synthase for growth of Sinorhizobium meliloti on PHB cycle intermediates. Journal of Bacteriology. 182: 2113-8. PMID 10735852 DOI: 10.1128/JB.182.8.2113-2118.2000  1
2000 Juck D, Charles T, Whyte LG, Greer CW. Polyphasic microbial community analysis of petroleum hydrocarbon-contaminated soils from two northern Canadian communities Fems Microbiology Ecology. 33: 241-249. DOI: 10.1016/S0168-6496(00)00067-2  1
1999 Aneja P, Charles TC. Poly-3-hydroxybutyrate degradation in Rhizobium (Sinorhizobium) meliloti: Isolation and characterization of a gene encoding 3-hydroxybutyrate dehydrogenase Journal of Bacteriology. 181: 849-857. PMID 9922248  1
1999 Charles TC, Aneja P. Methylmalonyl-CoA mutase encoding gene of Sinorhizobium meliloti Gene. 226: 121-127. PMID 9889346 DOI: 10.1016/S0378-1119(98)00555-1  1
1997 Charles TC, Cai GQ, Aneja P. Megaplasmid and chromosomal loci for the PHB degradation pathway in Rhizobium (Sinorhizobium) meliloti. Genetics. 146: 1211-20. PMID 9258668  1
1994 Oresnik IJ, Charles TC, Finan TM. Second site mutations specifically suppress the Fix- phenotype of Rhizobium meliloti ndvF mutations on alfalfa: Identification of a conditional ndvF-dependent mucoid colony phenotype Genetics. 136: 1233-1243. PMID 8013901  1
1993 Charles TC, Nester EW. A chromosomally encoded two-component sensory transduction system is required for virulence of Agrobacterium tumefaciens Journal of Bacteriology. 175: 6614-6625. PMID 8407839  1
1991 Charles TC, Finan TM. Analysis of a 1600-kilobase Rhizobium meliloti megaplasmid using defined deletions generated in vivo Genetics. 127: 5-20. PMID 1849856  1
1991 Charles TC, Newcomb W, Finan TM. ndvF, a novel locus located on megaplasmid pRmeSU47b (pEXO) of Rhizobium meliloti, is required for normal nodule development Journal of Bacteriology. 173: 3981-3992. PMID 1648074  1
1990 Charles TC, Finan TM. Genetic map of Rhizobium meliloti megaplasmid pRmeSU47b Journal of Bacteriology. 172: 2469-2476. PMID 2158971  1
1990 Charles TC, Singh RS, Finan TM. Lactose utilization and enzymes encoded by megaplasmids in Rhizobium meliloti SU47: Implications for population studies Journal of General Microbiology. 136: 2497-2502.  1
1989 Yarosh OK, Charles TC, Finan TM. Analysis of C4-dicarboxylate transport genes in Rhizobium meliloti Molecular Microbiology. 3: 813-823. PMID 2546011  1
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