Year |
Citation |
Score |
2024 |
Hoggard T, Chacin E, Hollatz AJ, Kurat CF, Fox CA. The budding yeast Fkh1 Forkhead associated (FHA) domain promotes a G1-chromatin state and the activity of chromosomal DNA replication origins. Plos Genetics. 20: e1011366. PMID 39102423 DOI: 10.1371/journal.pgen.1011366 |
0.838 |
|
2024 |
Hoggard T, Chacin E, Hollatz AJ, Kurat CF, Fox CA. The budding yeast Fkh1 Forkhead associated (FHA) domain promotes the G1-chromatin status and activity of chromosomal DNA replication origins. Biorxiv : the Preprint Server For Biology. PMID 38405780 DOI: 10.1101/2024.02.16.580712 |
0.838 |
|
2022 |
Regan-Mochrie G, Hoggard T, Bhagwat N, Lynch G, Hunter N, Remus D, Fox CA, Zhao X. Yeast ORC sumoylation status fine-tunes origin licensing. Genes & Development. PMID 35926881 DOI: 10.1101/gad.349610.122 |
0.799 |
|
2021 |
Hoggard T, Hollatz AJ, Cherney RE, Seman MR, Fox CA. The Fkh1 Forkhead associated domain promotes ORC binding to a subset of DNA replication origins in budding yeast. Nucleic Acids Research. PMID 34095951 DOI: 10.1093/nar/gkab450 |
0.825 |
|
2020 |
Hoggard T, Müller CA, Nieduszynski CA, Weinreich M, Fox CA. Sir2 mitigates an intrinsic imbalance in origin licensing efficiency between early- and late-replicating euchromatin. Proceedings of the National Academy of Sciences of the United States of America. PMID 32513739 DOI: 10.1073/Pnas.2004664117 |
0.804 |
|
2019 |
McDaniel SL, Hollatz AJ, Branstad AM, Gaskill MM, Fox CA, Harrison MM. Tissue-Specific DNA Replication Defects in Caused by a Meier-Gorlin Syndrome Mutation in Orc4. Genetics. PMID 31818869 DOI: 10.1534/Genetics.119.302938 |
0.371 |
|
2019 |
Dowdle ME, Park S, Blaser S, Fox CA, Houston DW, Sheets MD. A single KH domain in Bicaudal-C links mRNA binding and translational repression functions to maternal development. Development (Cambridge, England). PMID 31023875 DOI: 10.1242/Dev.172486 |
0.664 |
|
2018 |
Hoggard TA, Chang F, Perry KR, Subramanian S, Kenworthy J, Chueng J, Shor E, Hyland EM, Boeke JD, Weinreich M, Fox CA. Yeast heterochromatin regulators Sir2 and Sir3 act directly at euchromatic DNA replication origins. Plos Genetics. 14: e1007418. PMID 29795547 DOI: 10.1371/Journal.Pgen.1007418 |
0.825 |
|
2018 |
Kuznetsov VI, Haws SA, Fox CA, Denu JM. General method for rapid purification of native chromatin fragments. The Journal of Biological Chemistry. PMID 29794135 DOI: 10.1074/Jbc.Ra118.002984 |
0.33 |
|
2017 |
Sheets MD, Fox CA, Dowdle ME, Blaser SI, Chung A, Park S. Controlling the Messenger: Regulated Translation of Maternal mRNAs in Xenopus laevis Development. Advances in Experimental Medicine and Biology. 953: 49-82. PMID 27975270 DOI: 10.1007/978-3-319-46095-6_2 |
0.595 |
|
2016 |
Dummer AM, Su Z, Cherney R, Choi K, Denu J, Zhao X, Fox CA. Binding of the Fkh1 Forkhead Associated Domain to a Phosphopeptide within the Mph1 DNA Helicase Regulates Mating-Type Switching in Budding Yeast. Plos Genetics. 12: e1006094. PMID 27257873 DOI: 10.1371/Journal.Pgen.1006094 |
0.533 |
|
2016 |
Hoggard T, Liachko I, Burt C, Meikle T, Jiang K, Craciun G, Dunham M, Fox CA. High Throughput Analyses of Budding Yeast ARSs Reveal New DNA Elements Capable of Conferring Centromere-Independent Plasmid Propagation. G3 (Bethesda, Md.). PMID 26865697 DOI: 10.1534/G3.116.027904 |
0.812 |
|
2014 |
Ostrow AZ, Nellimoottil T, Knott SR, Fox CA, Tavaré S, Aparicio OM. Fkh1 and Fkh2 bind multiple chromosomal elements in the S. cerevisiae genome with distinct specificities and cell cycle dynamics. Plos One. 9: e87647. PMID 24504085 DOI: 10.1371/Journal.Pone.0087647 |
0.525 |
|
2013 |
Hoggard T, Shor E, Müller CA, Nieduszynski CA, Fox CA. A Link between ORC-origin binding mechanisms and origin activation time revealed in budding yeast. Plos Genetics. 9: e1003798. PMID 24068963 DOI: 10.1371/Journal.Pgen.1003798 |
0.825 |
|
2011 |
Park S, Patterson EE, Cobb J, Audhya A, Gartenberg MR, Fox CA. Palmitoylation controls the dynamics of budding-yeast heterochromatin via the telomere-binding protein Rif1. Proceedings of the National Academy of Sciences of the United States of America. 108: 14572-7. PMID 21844336 DOI: 10.1073/Pnas.1105262108 |
0.695 |
|
2011 |
Chang F, May CD, Hoggard T, Miller J, Fox CA, Weinreich M. High-resolution analysis of four efficient yeast replication origins reveals new insights into the ORC and putative MCM binding elements. Nucleic Acids Research. 39: 6523-35. PMID 21558171 DOI: 10.1093/Nar/Gkr301 |
0.797 |
|
2010 |
Müller P, Park S, Shor E, Huebert DJ, Warren CL, Ansari AZ, Weinreich M, Eaton ML, MacAlpine DM, Fox CA. The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin Genes and Development. 24: 1418-1433. PMID 20595233 DOI: 10.1101/Gad.1906410 |
0.581 |
|
2009 |
Shor E, Warren CL, Tietjen J, Hou Z, Müller U, Alborelli I, Gohard FH, Yemm AI, Borisov L, Broach JR, Weinreich M, Nieduszynski CA, Ansari AZ, Fox CA. The origin recognition complex interacts with a subset of metabolic genes tightly linked to origins of replication Plos Genetics. 5. PMID 19997491 DOI: 10.1371/Journal.Pgen.1000755 |
0.682 |
|
2009 |
Hou Z, Danzer JR, Mendoza L, Bose ME, Müller U, Williams B, Fox CA. Phylogenetic conservation and homology modeling help reveal a novel domain within the budding yeast heterochromatin protein Sir1. Molecular and Cellular Biology. 29: 687-702. PMID 19029247 DOI: 10.1128/Mcb.00202-08 |
0.803 |
|
2008 |
Fox CA, Weinreich M. Beyond heterochromatin: SIR2 inhibits the initiation of DNA replication. Cell Cycle (Georgetown, Tex.). 7: 3330-4. PMID 18948737 DOI: 10.4161/Cc.7.21.6971 |
0.497 |
|
2008 |
Patterson EE, Fox CA. The Ku complex in silencing the cryptic mating-type loci of Saccharomyces cerevisiae. Genetics. 180: 771-83. PMID 18716325 DOI: 10.1534/Genetics.108.091710 |
0.714 |
|
2008 |
Casey L, Patterson EE, Müller U, Fox CA. Conversion of a replication origin to a silencer through a pathway shared by a Forkhead transcription factor and an S phase cyclin. Molecular Biology of the Cell. 19: 608-22. PMID 18045995 DOI: 10.1091/Mbc.E07-04-0323 |
0.805 |
|
2006 |
Hou Z, Danzer JR, Fox CA, Keck JL. Structure of the Sir3 protein bromo adjacent homology (BAH) domain from S. cerevisiae at 1.95 A resolution. Protein Science : a Publication of the Protein Society. 15: 1182-6. PMID 16641491 DOI: 10.1110/Ps.052061006 |
0.644 |
|
2006 |
Gabrielse C, Miller CT, McConnell KH, DeWard A, Fox CA, Weinreich M. A Dbf4p BRCA1 C-terminal-like domain required for the response to replication fork arrest in budding yeast. Genetics. 173: 541-55. PMID 16547092 DOI: 10.1534/Genetics.106.057521 |
0.795 |
|
2006 |
McConnell KH, Müller P, Fox CA. Tolerance of Sir1p/origin recognition complex-dependent silencing for enhanced origin firing at HMRa. Molecular and Cellular Biology. 26: 1955-66. PMID 16479013 DOI: 10.1128/Mcb.26.5.1955-1966.2006 |
0.803 |
|
2005 |
Hou Z, Bernstein DA, Fox CA, Keck JL. Structural basis of the Sir1-origin recognition complex interaction in transcriptional silencing. Proceedings of the National Academy of Sciences of the United States of America. 102: 8489-94. PMID 15932939 DOI: 10.1073/Pnas.0503525102 |
0.653 |
|
2005 |
Fox CA, McConnell KH. Toward biochemical understanding of a transcriptionally silenced chromosomal domain in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 280: 8629-32. PMID 15623501 DOI: 10.1074/Jbc.R400033200 |
0.781 |
|
2004 |
Weinreich M, Palacios DeBeer MA, Fox CA. The activities of eukaryotic replication origins in chromatin. Biochimica Et Biophysica Acta. 1677: 142-57. PMID 15020055 DOI: 10.1016/J.Bbaexp.2003.11.015 |
0.53 |
|
2004 |
Bose ME, McConnell KH, Gardner-Aukema KA, Müller U, Weinreich M, Keck JL, Fox CA. The origin recognition complex and Sir4 protein recruit Sir1p to yeast silent chromatin through independent interactions requiring a common Sir1p domain. Molecular and Cellular Biology. 24: 774-86. PMID 14701749 DOI: 10.1128/Mcb.24.2.774-786.2004 |
0.768 |
|
2003 |
Sharp JA, Krawitz DC, Gardner KA, Fox CA, Kaufman PD. The budding yeast silencing protein Sir1 is a functional component of centromeric chromatin. Genes & Development. 17: 2356-61. PMID 12975325 DOI: 10.1101/Gad.1131103 |
0.486 |
|
2003 |
Palacios DeBeer MA, Muller U, Fox CA. Differential DNA affinity specifies roles for the origin recognition complex in budding yeast heterochromatin. Genes & Development. 17: 1817-22. PMID 12897051 DOI: 10.1101/Gad.1096703 |
0.535 |
|
2001 |
Hollenhorst PC, Pietz G, Fox CA. Mechanisms controlling differential promoter-occupancy by the yeast forkhead proteins Fkh1p and Fkh2p: implications for regulating the cell cycle and differentiation. Genes & Development. 15: 2445-56. PMID 11562353 DOI: 10.1101/Gad.906201 |
0.749 |
|
2001 |
Georgel PT, Palacios DeBeer MA, Pietz G, Fox CA, Hansen JC. Sir3-dependent assembly of supramolecular chromatin structures in vitro Proceedings of the National Academy of Sciences of the United States of America. 98: 8584-8589. PMID 11447281 DOI: 10.1073/Pnas.151258798 |
0.486 |
|
2001 |
Gardner KA, Fox CA. The Sir1 protein's association with a silenced chromosome domain. Genes & Development. 15: 147-57. PMID 11157772 DOI: 10.1101/Gad.852801 |
0.575 |
|
2000 |
Hollenhorst PC, Bose ME, Mielke MR, Müller U, Fox CA. Forkhead genes in transcriptional silencing, cell morphology and the cell cycle. Overlapping and distinct functions for FKH1 and FKH2 in Saccharomyces cerevisiae. Genetics. 154: 1533-48. PMID 10747051 |
0.795 |
|
1999 |
Palacios DeBeer MA, Fox CA. A role for a replicator dominance mechanism in silencing Embo Journal. 18: 3808-3819. PMID 10393196 DOI: 10.1093/Emboj/18.13.3808 |
0.491 |
|
1999 |
Gardner KA, Rine J, Fox CA. A region of the Sir1 protein dedicated to recognition of a silencer and required for interaction with the Orc1 protein in saccharomyces cerevisiae. Genetics. 151: 31-44. PMID 9872946 |
0.643 |
|
1997 |
Fox CA, Ehrenhofer-Murray AE, Loo S, Rine J. The origin recognition complex, SIR1, and the S phase requirement for silencing Science. 276: 1547. PMID 9171055 DOI: 10.1126/Science.276.5318.1547 |
0.665 |
|
1996 |
Fox CA, Rine J. Influences of the cell cycle on silencing Current Opinion in Cell Biology. 8: 354-357. PMID 8743886 DOI: 10.1016/S0955-0674(96)80009-3 |
0.652 |
|
1995 |
Fox CA, Loo S, Dillin A, Rine J. The origin recognition complex has essential functions in transcriptional silencing and chromosomal replication Genes and Development. 9: 911-924. PMID 7774809 DOI: 10.1101/Gad.9.8.911 |
0.745 |
|
1995 |
Loo S, Fox CA, Rine J, Kobayashi R, Stillman B, Bell S. The origin recognition complex in silencing, cell cycle progression, and DNA replication Molecular Biology of the Cell. 6: 741-756. PMID 7579692 DOI: 10.1091/Mbc.6.6.741 |
0.652 |
|
1994 |
Bilger A, Fox CA, Wahle E, Wickens M. Nuclear polyadenylation factors recognize cytoplasmic polyadenylation elements. Genes & Development. 8: 1106-16. PMID 7926790 DOI: 10.1101/Gad.8.9.1106 |
0.597 |
|
1994 |
Sheets MD, Fox CA, Hunt T, Vande Woude G, Wickens M. The 3'-untranslated regions of c-mos and cyclin mRNAs stimulate translation by regulating cytoplasmic polyadenylation. Genes & Development. 8: 926-38. PMID 7926777 DOI: 10.1101/Gad.8.8.926 |
0.672 |
|
1993 |
Fox CA, Loo S, Rivier DH, Foss MA, Rine J. A transcriptional silencer as a specialized origin of replication that establishes functional domains of chromatin Cold Spring Harbor Symposia On Quantitative Biology. 58: 443-455. PMID 7956058 DOI: 10.1101/Sqb.1993.058.01.051 |
0.663 |
|
1992 |
Fox CA, Sheets MD, Wahle E, Wickens M. Polyadenylation of maternal mRNA during oocyte maturation: poly(A) addition in vitro requires a regulated RNA binding activity and a poly(A) polymerase. The Embo Journal. 11: 5021-32. PMID 1464324 DOI: 10.1002/J.1460-2075.1992.Tb05609.X |
0.706 |
|
1990 |
Fox CA, Wickens M. Poly(A) removal during oocyte maturation: a default reaction selectively prevented by specific sequences in the 3' UTR of certain maternal mRNAs. Genes & Development. 4: 2287-98. PMID 1980657 DOI: 10.1101/Gad.4.12B.2287 |
0.554 |
|
1989 |
Fox CA, Sheets MD, Wickens MP. Poly(A) addition during maturation of frog oocytes: distinct nuclear and cytoplasmic activities and regulation by the sequence UUUUUAU. Genes & Development. 3: 2151-62. PMID 2628165 DOI: 10.1101/Gad.3.12B.2151 |
0.689 |
|
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