Aaron F. Carlin, Ph.D. - Publications

Affiliations: 
2007 Biomedical Sciences University of California, San Diego, La Jolla, CA 
Area:
Microbiology Biology, Immunology

10/40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Naito-Matsui Y, Davies LR, Takematsu H, Chou HH, Tangvoranuntakul P, Carlin AF, Verhagen A, Heyser CJ, Yoo SW, Choudhury B, Paton JC, Paton AW, Varki NM, Schnaar RL, Varki A. Physiological Exploration of the Long-term Evolutionary Selection Against Expression of N-glycolylneuraminic Acid in the Brain. The Journal of Biological Chemistry. PMID 28049733 DOI: 10.1074/Jbc.M116.768531  0.84
2014 Ali SR, Fong JJ, Carlin AF, Busch TD, Linden R, Angata T, Areschoug T, Parast M, Varki N, Murray J, Nizet V, Varki A. Siglec-5 and Siglec-14 are polymorphic paired receptors that modulate neutrophil and amnion signaling responses to group B Streptococcus. The Journal of Experimental Medicine. 211: 1231-42. PMID 24799499 DOI: 10.1084/Jem.20131853  0.84
2014 Muto J, Morioka Y, Yamasaki K, Kim M, Garcia A, Carlin AF, Varki A, Gallo RL. Hyaluronan digestion controls DC migration from the skin. The Journal of Clinical Investigation. 124: 1309-19. PMID 24487587 DOI: 10.1172/Jci67947  0.84
2013 Shibata N, Carlin AF, Spann NJ, Saijo K, Morello CS, McDonald JG, Romanoski CE, Maurya MR, Kaikkonen MU, Lam MT, Crotti A, Reichart D, Fox JN, Quehenberger O, Raetz CR, et al. 25-Hydroxycholesterol activates the integrated stress response to reprogram transcription and translation in macrophages. The Journal of Biological Chemistry. 288: 35812-23. PMID 24189069 DOI: 10.1074/Jbc.M113.519637  0.84
2009 Uchiyama S, Carlin AF, Khosravi A, Weiman S, Banerjee A, Quach D, Hightower G, Mitchell TJ, Doran KS, Nizet V. The surface-anchored NanA protein promotes pneumococcal brain endothelial cell invasion. The Journal of Experimental Medicine. 206: 1845-52. PMID 19687228 DOI: 10.1084/Jem.20090386  0.84
2009 Weiman S, Dahesh S, Carlin AF, Varki A, Nizet V, Lewis AL. Genetic and biochemical modulation of sialic acid O-acetylation on group B Streptococcus: phenotypic and functional impact. Glycobiology. 19: 1204-13. PMID 19643844 DOI: 10.1093/Glycob/Cwp111  0.84
2009 Carlin AF, Chang YC, Areschoug T, Lindahl G, Hurtado-Ziola N, King CC, Varki A, Nizet V. Group B Streptococcus suppression of phagocyte functions by protein-mediated engagement of human Siglec-5. The Journal of Experimental Medicine. 206: 1691-9. PMID 19596804 DOI: 10.1084/Jem.20090691  0.84
2009 Carlin AF, Uchiyama S, Chang YC, Lewis AL, Nizet V, Varki A. Molecular mimicry of host sialylated glycans allows a bacterial pathogen to engage neutrophil Siglec-9 and dampen the innate immune response. Blood. 113: 3333-6. PMID 19196661 DOI: 10.1182/Blood-2008-11-187302  0.84
2007 Lewis AL, Cao H, Patel SK, Diaz S, Ryan W, Carlin AF, Thon V, Lewis WG, Varki A, Chen X, Nizet V. NeuA sialic acid O-acetylesterase activity modulates O-acetylation of capsular polysaccharide in group B Streptococcus. The Journal of Biological Chemistry. 282: 27562-71. PMID 17646166 DOI: 10.1074/Jbc.M700340200  0.84
2007 Carlin AF, Lewis AL, Varki A, Nizet V. Group B streptococcal capsular sialic acids interact with siglecs (immunoglobulin-like lectins) on human leukocytes. Journal of Bacteriology. 189: 1231-7. PMID 16997964 DOI: 10.1128/Jb.01155-06  0.84
Low-probability matches
2021 Li N, Hui H, Bray B, Gonzalez GM, Zeller M, Anderson KG, Knight R, Smith D, Wang Y, Carlin AF, Rana TM. METTL3 regulates viral m6A RNA modification and host cell innate immune responses during SARS-CoV-2 infection. Cell Reports. 109091. PMID 33961823 DOI: 10.1016/j.celrep.2021.109091  0.04
2021 Frankel AE, Reddy R, DeSuza KR, Deeb K, Carlin AF, Smith D, Xie Y, Naik E, Silver RT, Hasselbalch HC. Response to pegylated interferon in a COVID-19-positive elderly woman with primary myelofibrosis treated with ruxolitinib. Clinical Case Reports. 9: 2228-2235. PMID 33936671 DOI: 10.1002/ccr3.3997  0.04
2021 Sandoval DR, Clausen TM, Nora C, Cribbs AP, Denardo A, Clark AE, Garretson AF, Coker JKC, Narayanan A, Majowicz SA, Philpott M, Johansson C, Dunford JE, Spliid CB, Golden GJ, ... ... Carlin AF, et al. The Prolyl-tRNA Synthetase Inhibitor Halofuginone Inhibits SARS-CoV-2 Infection. Biorxiv : the Preprint Server For Biology. PMID 33791697 DOI: 10.1101/2021.03.22.436522  0.04
2020 Wang S, Li W, Hui H, Tiwari SK, Zhang Q, Croker BA, Rawlings S, Smith D, Carlin AF, Rana TM. Cholesterol 25-Hydroxylase inhibits SARS-CoV-2 and coronaviruses by depleting membrane cholesterol. The Embo Journal. e2020106057. PMID 32944968 DOI: 10.15252/Embj.2020106057  0.04
2020 Schooley RT, Carlin AF, Beadle JR, Valiaeva N, Zhang XQ, Garretson AF, Smith VI, Murphy J, Hostetler KY. Rethinking Remdesivir: Synthesis of Lipid Prodrugs that Substantially Enhance Anti-Coronavirus Activity. Biorxiv : the Preprint Server For Biology. PMID 32869033 DOI: 10.1101/2020.08.26.269159  0.04
2020 Clausen TM, Sandoval DR, Spliid CB, Pihl J, Painter CD, Thacker BE, Glass CA, Narayanan A, Majowicz SA, Zhang Y, Torres JL, Golden GJ, Porell R, Garretson AF, Laubach L, ... ... Carlin AF, et al. SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2. Biorxiv : the Preprint Server For Biology. PMID 32699853 DOI: 10.1101/2020.07.14.201616  0.04
2018 Carlin AF, Vizcarra EA, Branche E, Viramontes KM, Suarez-Amaran L, Ley K, Heinz S, Benner C, Shresta S, Glass CK. Deconvolution of pro- and antiviral genomic responses in Zika virus-infected and bystander macrophages. Proceedings of the National Academy of Sciences of the United States of America. 115: E9172-E9181. PMID 30206152 DOI: 10.1073/Pnas.1807690115  0.04
2016 Oishi Y, Spann NJ, Link VM, Muse ED, Strid T, Edillor C, Kolar MJ, Matsuzaka T, Hayakawa S, Tao J, Kaikkonen MU, Carlin AF, Lam MT, Manabe I, Shimano H, et al. SREBP1 Contributes to Resolution of Pro-inflammatory TLR4 Signaling by Reprogramming Fatty Acid Metabolism. Cell Metabolism. PMID 28041958 DOI: 10.1016/J.Cmet.2016.11.009  0.04
2015 Carlin AF, Aristizabal P, Song Q, Wang H, Paulson MS, Stamm LM, Schooley RT, Wyles DL. Temporal dynamics of inflammatory cytokines/chemokines during sofosbuvir and ribavirin therapy for genotype 2 and 3 hepatitis C infection. Hepatology (Baltimore, Md.). PMID 26147061 DOI: 10.1002/Hep.27971  0.04
2021 Carlin AF, Beyhan S, Peña JF, Stajich JE, Viriyakosol S, Fierer J, Kirkland TN. Transcriptional Analysis of Mycelia and Spherules by RNA Sequencing. Journal of Fungi (Basel, Switzerland). 7. PMID 34067070 DOI: 10.3390/jof7050366  0.01
2021 Park SH, Siddiqi H, Castro DV, De Angelis AA, Oom AL, Stoneham CA, Lewinski MK, Clark AE, Croker BA, Carlin AF, Guatelli J, Opella SJ. Interactions of SARS-CoV-2 envelope protein with amilorides correlate with antiviral activity. Plos Pathogens. 17: e1009519. PMID 34003853 DOI: 10.1371/journal.ppat.1009519  0.01
2021 Mellott DM, Tseng CT, Drelich A, Fajtová P, Chenna BC, Kostomiris DH, Hsu J, Zhu J, Taylor ZW, Kocurek KI, Tat V, Katzfuss A, Li L, Giardini MA, Skinner D, ... ... Carlin AF, et al. A Clinical-Stage Cysteine Protease Inhibitor blocks SARS-CoV-2 Infection of Human and Monkey Cells. Acs Chemical Biology. PMID 33787221 DOI: 10.1021/acschembio.0c00875  0.01
2021 Singh NK, Ray P, Carlin AF, Magallanes C, Morgan SC, Laurent LC, Aronoff-Spencer ES, Hall DA. Hitting the diagnostic sweet spot: Point-of-care SARS-CoV-2 salivary antigen testing with an off-the-shelf glucometer. Biosensors & Bioelectronics. 180: 113111. PMID 33743492 DOI: 10.1016/j.bios.2021.113111  0.01
2021 Tiwari SK, Wang S, Smith D, Carlin AF, Rana TM. Revealing tissue-specific SARS-CoV-2 infection and host responses using human stem cell-derived lung and cerebral organoids. Stem Cell Reports. PMID 33631122 DOI: 10.1016/j.stemcr.2021.02.005  0.01
2021 Wang L, Sievert D, Clark AE, Federman H, Gastfriend BD, Shusta E, Palecek SP, Carlin AF, Gleeson J. A Human 3D neural assembloid model for SARS-CoV-2 infection. Biorxiv : the Preprint Server For Biology. PMID 33594369 DOI: 10.1101/2021.02.09.430349  0.01
2021 Mor M, Werbner M, Alter J, Safra M, Chomsky E, Lee JC, Hada-Neeman S, Polonsky K, Nowell CJ, Clark AE, Roitburd-Berman A, Ben-Shalom N, Navon M, Rafael D, Sharim H, ... ... Carlin AF, et al. Multi-clonal SARS-CoV-2 neutralization by antibodies isolated from severe COVID-19 convalescent donors. Plos Pathogens. 17: e1009165. PMID 33571304 DOI: 10.1371/journal.ppat.1009165  0.01
2020 Mellott D, Tseng CT, Drelich A, Fajtova P, Chenna BC, Kostomiris D, Hsu JC, Zhu J, Taylor Z, Tat V, Katzfuss A, Li L, Giardini MA, Skinner D, Hirata K, ... ... Carlin AF, et al. A cysteine protease inhibitor blocks SARS-CoV-2 infection of human and monkey cells. Biorxiv : the Preprint Server For Biology. PMID 33140046 DOI: 10.1101/2020.10.23.347534  0.01
2020 Carlin AF, Viriyakosol S, Okamoto S, Walls L, Fierer J. IL-8R2 Deficient Mice are More Resistant to Pulmonary Coccidioidomycosis. Infection and Immunity. PMID 33106296 DOI: 10.1128/IAI.00883-19  0.01
2020 Mor M, Werbner M, Alter J, Safra M, Chomsky E, Hada-Neeman S, Polonsky K, Nowell CJ, Clark AE, Roitburd-Berman A, Shalom NB, Navon M, Rafael D, Sharim H, Kiner E, ... ... Carlin AF, et al. Multi-Clonal Live SARS-CoV-2 In Vitro Neutralization by Antibodies Isolated from Severe COVID-19 Convalescent Donors. Biorxiv : the Preprint Server For Biology. PMID 33052341 DOI: 10.1101/2020.10.06.323634  0.01
2020 Clausen TM, Sandoval DR, Spliid CB, Pihl J, Perrett HR, Painter CD, Narayanan A, Majowicz SA, Kwong EM, McVicar RN, Thacker BE, Glass CA, Yang Z, Torres JL, Golden GJ, ... ... Carlin AF, et al. SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2. Cell. PMID 32970989 DOI: 10.1016/J.Cell.2020.09.033  0.01
2020 Grifoni A, Weiskopf D, Ramirez SI, Mateus J, Dan JM, Moderbacher CR, Rawlings SA, Sutherland A, Premkumar L, Jadi RS, Marrama D, de Silva AM, Frazier A, Carlin AF, Greenbaum JA, et al. Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals. Cell. PMID 32473127 DOI: 10.1016/J.Cell.2020.05.015  0.01
2018 Carlin AF, Wen J, Vizcarra EA, McCauley M, Chaillon A, Akrami K, Kim C, Ngono AE, Lara-Marquez ML, Smith DM, Glass CK, Schooley RT, Benner C, Shresta S. A longitudinal systems immunologic investigation of acute Zika virus infection in an individual infected while traveling to Caracas, Venezuela. Plos Neglected Tropical Diseases. 12: e0007053. PMID 30596671 DOI: 10.1371/Journal.Pntd.0007053  0.01
2018 Carlin AF, Shresta S. Genome-wide approaches to unravelling host-virus interactions in Dengue and Zika infections. Current Opinion in Virology. 34: 29-38. PMID 30576956 DOI: 10.1016/J.Coviro.2018.11.010  0.01
2018 Fowler AM, Tang WW, Young MP, Mamidi A, Viramontes KM, McCauley MD, Carlin AF, Schooley RT, Swanstrom J, Baric RS, Govero J, Diamond MS, Shresta S. Maternally Acquired Zika Antibodies Enhance Dengue Disease Severity in Mice. Cell Host & Microbe. 24: 743-750.e5. PMID 30439343 DOI: 10.1016/J.Chom.2018.09.015  0.01
2018 Carlin AF, Abeles S, Chin NA, Lin GY, Young M, Vinetz JM. Case Report: A Common Source Outbreak of Anisakidosis in the United States and Postexposure Prophylaxis of Family Collaterals. The American Journal of Tropical Medicine and Hygiene. PMID 30226150 DOI: 10.4269/Ajtmh.18-0586  0.01
2017 Carlin AF, Plummer EM, Vizcarra EA, Sheets N, Joo Y, Tang W, Day J, Greenbaum J, Glass CK, Diamond MS, Shresta S. An IRF-3-, IRF-5-, and IRF-7-Independent Pathway of Dengue Viral Resistance Utilizes IRF-1 to Stimulate Type I and II Interferon Responses. Cell Reports. 21: 1600-1612. PMID 29117564 DOI: 10.1016/J.Celrep.2017.10.054  0.01
1974 Nielsen LM, Carlin AF. Frozen, precooked beef and beef soy loaves Journal of the American Dietetic Association. 65: 35-40. PMID 4857763  0.01
1973 Payton SB, Carlin AF. Quality of Frozen Turkey Crepes in Relation to Antioxidants Used and Length of Storage at 0°F. 1 Family and Consumer Sciences Research Journal. 2: 21-28. DOI: 10.1177/1077727X7300200103  0.01
1968 Carlin AF, Cash D, Mott C. Effect of boning and final internal temperature on quality of fresh hams. Journal of the American Dietetic Association. 53: 36-40. PMID 5690489  0.01
1962 AUGUSTINE GM, CARLIN AF, MARQUESS CG. Quality of whole turkey and turkey rolls Journal of the American Dietetic Association. 41: 443-447. PMID 13965538  0.01
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