Erika M. Kvikstad, Ph.D. - Publications

Affiliations: 
Universite Lyon 1, Villeurbanne, Auvergne-Rhône-Alpes, France 

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Pagnamenta AT, Camps C, Giacopuzzi E, Taylor JM, Hashim M, Calpena E, Kaisaki PJ, Hashimoto A, Yu J, Sanders E, Schwessinger R, Hughes JR, Lunter G, Dreau H, Ferla M, ... ... Kvikstad EM, et al. Structural and non-coding variants increase the diagnostic yield of clinical whole genome sequencing for rare diseases. Genome Medicine. 15: 94. PMID 37946251 DOI: 10.1186/s13073-023-01240-0  0.511
2021 Szustakowski JD, Balasubramanian S, Kvikstad E, Khalid S, Bronson PG, Sasson A, Wong E, Liu D, Wade Davis J, Haefliger C, Katrina Loomis A, Mikkilineni R, Noh HJ, Wadhawan S, Bai X, et al. Advancing human genetics research and drug discovery through exome sequencing of the UK Biobank. Nature Genetics. PMID 34183854 DOI: 10.1038/s41588-021-00885-0  0.319
2021 Kosmicki JA, Horowitz JE, Banerjee N, Lanche R, Marcketta A, Maxwell E, Bai X, Sun D, Backman JD, Sharma D, Kury FSP, Kang HM, O'Dushlaine C, Yadav A, Mansfield AJ, ... ... Kvikstad E, et al. Pan-ancestry exome-wide association analyses of COVID-19 outcomes in 586,157 individuals. American Journal of Human Genetics. PMID 34115965 DOI: 10.1016/j.ajhg.2021.05.017  0.353
2019 Schwarze K, Buchanan J, Fermont JM, Dreau H, Tilley MW, Taylor JM, Antoniou P, Knight SJL, Camps C, Pentony MM, Kvikstad EM, Harris S, Popitsch N, Pagnamenta AT, Schuh A, et al. The complete costs of genome sequencing: a microcosting study in cancer and rare diseases from a single center in the United Kingdom. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 31358947 DOI: 10.1038/S41436-019-0618-7  0.508
2018 Lenglet M, Robriquet F, Schwarz K, Camps C, Couturier A, Hoogewijs D, Buffet A, Knight SJ, Gad S, Couvé S, Chesnel F, Pacault M, Lindenbaum P, Job S, Dumont S, ... ... Kvikstad E, et al. New lessons from an old gene: complex splicing and a novel cryptic exon in VHL gene cause erythrocytosis and VHL disease. Blood. PMID 29891534 DOI: 10.1182/Blood-2018-03-838235  0.371
2018 Schuh A, Dreau H, Knight SJL, Ridout K, Mizani T, Vavoulis D, Colling R, Antoniou P, Kvikstad EM, Pentony MM, Hamblin A, Protheroe A, Parton M, Shah KA, Orosz Z, et al. Clinically actionable mutation profiles in patients with cancer identified by whole-genome sequencing. Cold Spring Harbor Molecular Case Studies. 4. PMID 29610388 DOI: 10.1101/mcs.a002279  0.365
2018 Kvikstad EM, Piazza P, Taylor JC, Lunter G. A high throughput screen for active human transposable elements. Bmc Genomics. 19: 115. PMID 29390960 DOI: 10.1186/S12864-018-4485-4  0.51
2014 Kvikstad EM, Duret L. Strong heterogeneity in mutation rate causes misleading hallmarks of natural selection on indel mutations in the human genome. Molecular Biology and Evolution. 31: 23-36. PMID 24113537 DOI: 10.1093/Molbev/Mst185  0.601
2013 Montgomery SB, Goode DL, Kvikstad E, Albers CA, Zhang ZD, Mu XJ, Ananda G, Howie B, Karczewski KJ, Smith KS, Anaya V, Richardson R, Davis J, MacArthur DG, et al. The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes. Genome Research. 23: 749-61. PMID 23478400 DOI: 10.1101/Gr.148718.112  0.571
2010 Kvikstad EM, Makova KD. The (r)evolution of SINE versus LINE distributions in primate genomes: sex chromosomes are important. Genome Research. 20: 600-13. PMID 20219940 DOI: 10.1101/Gr.099044.109  0.584
2009 Kvikstad EM, Chiaromonte F, Makova KD. Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions. Genome Research. 19: 1153-64. PMID 19502380 DOI: 10.1101/Gr.088922.108  0.663
2007 Kvikstad EM, Tyekucheva S, Chiaromonte F, Makova KD. A macaque's-eye view of human insertions and deletions: differences in mechanisms. Plos Computational Biology. 3: 1772-82. PMID 17941704 DOI: 10.1371/Journal.Pcbi.0030176  0.69
2004 Zhou S, Kile A, Bechner M, Place M, Kvikstad E, Deng W, Wei J, Severin J, Runnheim R, Churas C, Forrest D, Dimalanta ET, Lamers C, Burland V, Blattner FR, et al. Single-molecule approach to bacterial genomic comparisons via optical mapping. Journal of Bacteriology. 186: 7773-82. PMID 15516592 DOI: 10.1128/Jb.186.22.7773-7782.2004  0.498
2004 Zhou S, Kile A, Kvikstad E, Bechner M, Severin J, Forrest D, Runnheim R, Churas C, Anantharaman TS, Myler P, Vogt C, Ivens A, Stuart K, Schwartz DC. Shotgun optical mapping of the entire Leishmania major Friedlin genome. Molecular and Biochemical Parasitology. 138: 97-106. PMID 15500921 DOI: 10.1016/J.Molbiopara.2004.08.002  0.491
2003 Zhou S, Kvikstad E, Kile A, Severin J, Forrest D, Runnheim R, Churas C, Hickman JW, Mackenzie C, Choudhary M, Donohue T, Kaplan S, Schwartz DC. Whole-genome shotgun optical mapping of Rhodobacter sphaeroides strain 2.4.1 and its use for whole-genome shotgun sequence assembly. Genome Research. 13: 2142-51. PMID 12952882 DOI: 10.1101/Gr.1128803  0.517
2002 Zhou S, Deng W, Anantharaman TS, Lim A, Dimalanta ET, Wang J, Wu T, Chunhong T, Creighton R, Kile A, Kvikstad E, Bechner M, Yen G, Garic-Stankovic A, Severin J, et al. A whole-genome shotgun optical map of Yersinia pestis strain KIM. Applied and Environmental Microbiology. 68: 6321-31. PMID 12450857 DOI: 10.1128/Aem.68.12.6321-6331.2002  0.447
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