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Piotr Sliz, Ph.D. - Publications

Affiliations: 
2000- Harvard Medical School, Boston, MA, United States 
Area:
Microbiology Biology, Biochemistry
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Liu Q, Shvarts T, Sliz P, Gregory RI. RiboToolkit: an integrated platform for analysis and annotation of ribosome profiling data to decode mRNA translation at codon resolution. Nucleic Acids Research. PMID 32427338 DOI: 10.1093/Nar/Gkaa395  0.327
2020 Yu C, Wang L, Rowe RG, Han A, Ji W, McMahon C, Baier AS, Huang YC, Marion W, Pearson DS, Kruse AC, Daley GQ, Wu H, Sliz P. A nanobody targeting the LIN28:let-7 interaction fragment of TUT4 blocks uridylation of let-7. Proceedings of the National Academy of Sciences of the United States of America. PMID 32060122 DOI: 10.1073/Pnas.1919409117  0.326
2018 Wang L, Rowe RG, Jaimes A, Yu C, Nam Y, Pearson DS, Zhang J, Xie X, Marion W, Heffron GJ, Daley GQ, Sliz P. Small-Molecule Inhibitors Disrupt let-7 Oligouridylation and Release the Selective Blockade of let-7 Processing by LIN28. Cell Reports. 23: 3091-3101. PMID 29874593 DOI: 10.1016/J.Celrep.2018.04.116  0.585
2017 Wang L, Nam Y, Lee AK, Yu C, Roth K, Chen C, Ransey EM, Sliz P. LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation. Cell Reports. 18: 2664-2675. PMID 28297670 DOI: 10.1016/J.Celrep.2017.02.044  0.61
2017 Kulczyk AW, Moeller A, Meyer P, Sliz P, Richardson CC. Cryo-EM structure of the replisome reveals multiple interactions coordinating DNA synthesis. Proceedings of the National Academy of Sciences of the United States of America. PMID 28223502 DOI: 10.1073/Pnas.1701252114  0.317
2016 McKinney B, Meyer PA, Crosas M, Sliz P. Extension of research data repository system to support direct compute access to biomedical datasets: enhancing Dataverse to support large datasets. Annals of the New York Academy of Sciences. PMID 27862010 DOI: 10.1111/Nyas.13272  0.385
2016 Meyer PA, Socias S, Key J, Ransey E, Tjon EC, Buschiazzo A, Lei M, Botka C, Withrow J, Neau D, Rajashankar K, Anderson KS, Baxter RH, Blacklow SC, Boggon TJ, ... ... Sliz P, et al. Data publication with the structural biology data grid supports live analysis. Nature Communications. 7: 10882. PMID 26947396 DOI: 10.1038/Ncomms10882  0.67
2015 Lelyveld VS, Bjorkbom A, Ransey E, Sliz P, Szostak JW. Pinpointing RNA-protein crosslinks with site-specific stable isotope labeled oligonucleotides. Journal of the American Chemical Society. PMID 26583201 DOI: 10.1021/Jacs.5B10596  0.303
2012 Stokes-Rees I, Levesque I, Murphy FV, Yang W, Deacon A, Sliz P. Adapting federated cyberinfrastructure for shared data collection facilities in structural biology. Journal of Synchrotron Radiation. 19: 462-7. PMID 22514186 DOI: 10.1107/S0909049512009776  0.33
2012 O'Donovan DJ, Stokes-Rees I, Nam Y, Blacklow SC, Schröder GF, Brunger AT, Sliz P. A grid-enabled web service for low-resolution crystal structure refinement. Acta Crystallographica. Section D, Biological Crystallography. 68: 261-7. PMID 22349228 DOI: 10.1107/S0907444912001163  0.666
2012 Choi SH, Wales TE, Nam Y, O'Donovan DJ, Sliz P, Engen JR, Blacklow SC. Conformational locking upon cooperative assembly of notch transcription complexes. Structure (London, England : 1993). 20: 340-9. PMID 22325781 DOI: 10.1016/J.Str.2011.12.011  0.68
2012 Jiang J, Lazarus MB, Pasquina L, Sliz P, Walker S. A neutral diphosphate mimic crosslinks the active site of human O-GlcNAc transferase. Nature Chemical Biology. 8: 72-7. PMID 22082911 DOI: 10.1038/Nchembio.711  0.307
2011 Nam Y, Chen C, Gregory RI, Chou JJ, Sliz P. Molecular basis for interaction of let-7 microRNAs with Lin28. Cell. 147: 1080-91. PMID 22078496 DOI: 10.1016/J.Cell.2011.10.020  0.604
2011 Lazarus MB, Nam Y, Jiang J, Sliz P, Walker S. Structure of human O-GlcNAc transferase and its complex with a peptide substrate. Nature. 469: 564-7. PMID 21240259 DOI: 10.1038/Nature09638  0.591
2010 Stokes-Rees I, Sliz P. Protein structure determination by exhaustive search of Protein Data Bank derived databases. Proceedings of the National Academy of Sciences of the United States of America. 107: 21476-81. PMID 21098306 DOI: 10.1073/Pnas.1012095107  0.353
2010 Fuse S, Tsukamoto H, Yuan Y, Wang TS, Zhang Y, Bolla M, Walker S, Sliz P, Kahne D. Functional and structural analysis of a key region of the cell wall inhibitor moenomycin. Acs Chemical Biology. 5: 701-11. PMID 20496948 DOI: 10.1021/Cb100048Q  0.347
2008 Yuan Y, Fuse S, Ostash B, Sliz P, Kahne D, Walker S. Structural analysis of the contacts anchoring moenomycin to peptidoglycan glycosyltransferases and implications for antibiotic design. Acs Chemical Biology. 3: 429-36. PMID 18642800 DOI: 10.1021/Cb800078A  0.37
2007 Kim S, Malinverni JC, Sliz P, Silhavy TJ, Harrison SC, Kahne D. Structure and function of an essential component of the outer membrane protein assembly machine. Science (New York, N.Y.). 317: 961-4. PMID 17702946 DOI: 10.1126/Science.1143993  0.491
2007 Yuan Y, Barrett D, Zhang Y, Kahne D, Sliz P, Walker S. Crystal structure of a peptidoglycan glycosyltransferase suggests a model for processive glycan chain synthesis. Proceedings of the National Academy of Sciences of the United States of America. 104: 5348-53. PMID 17360321 DOI: 10.1073/Pnas.0701160104  0.334
2007 Nam Y, Sliz P, Pear WS, Aster JC, Blacklow SC. Cooperative assembly of higher-order Notch complexes functions as a switch to induce transcription. Proceedings of the National Academy of Sciences of the United States of America. 104: 2103-8. PMID 17284587 DOI: 10.1073/Pnas.0611092104  0.669
2006 Nam Y, Sliz P, Song L, Aster JC, Blacklow SC. Structural basis for cooperativity in recruitment of MAML coactivators to Notch transcription complexes. Cell. 124: 973-83. PMID 16530044 DOI: 10.1016/J.Cell.2005.12.037  0.686
2006 Gonen T, Cheng Y, Sliz P, Hiroaki Y, Fujiyoshi Y, Harrison SC, Walz T. Erratum: Corrigendum: Lipid–protein interactions in double-layered two-dimensional AQP0 crystals Nature. 441: 248-248. DOI: 10.1038/Nature04775  0.496
2005 Gonen T, Cheng Y, Sliz P, Hiroaki Y, Fujiyoshi Y, Harrison SC, Walz T. Lipid-protein interactions in double-layered two-dimensional AQP0 crystals. Nature. 438: 633-8. PMID 16319884 DOI: 10.1038/Nature04321  0.492
2004 Fotin A, Cheng Y, Sliz P, Grigorieff N, Harrison SC, Kirchhausen T, Walz T. Molecular model for a complete clathrin lattice from electron cryomicroscopy. Nature. 432: 573-9. PMID 15502812 DOI: 10.1038/Nature03079  0.481
2003 Jin L, Sliz P, Chen L, Macián F, Rao A, Hogan PG, Harrison SC. An asymmetric NFAT1 dimer on a pseudo-palindromic kappa B-like DNA site. Nature Structural Biology. 10: 807-11. PMID 12949491 DOI: 10.1038/Nsb975  0.521
2003 Sliz P, Harrison SC, Rosenbaum G. How does radiation damage in protein crystals depend on X-ray dose? Structure (London, England : 1993). 11: 13-9. PMID 12517336 DOI: 10.1016/S0969-2126(02)00910-3  0.473
2002 Sliz P, Harrison SC, Rosenbaum G. Dose ratevsdose dependency of radiation damage to protein crystals Acta Crystallographica Section a Foundations of Crystallography. 58: c72-c72. DOI: 10.1107/S0108767302087925  0.437
2001 Sliz P, Michielin O, Cerottini JC, Luescher I, Romero P, Karplus M, Wiley DC. Crystal structures of two closely related but antigenically distinct HLA-A2/melanocyte-melanoma tumor-antigen peptide complexes. Journal of Immunology (Baltimore, Md. : 1950). 167: 3276-84. PMID 11544315 DOI: 10.4049/Jimmunol.167.6.3276  0.506
1997 Sliz P, Engelmann R, Hengstenberg W, Pai EF. The structure of enzyme IIAlactose from Lactococcus lactis reveals a new fold and points to possible interactions of a multicomponent system. Structure (London, England : 1993). 5: 775-88. PMID 9261069 DOI: 10.1016/S0969-2126(97)00232-3  0.549
1996 Sliz P, Schörter KH, De Vos WM, Pai EF. Crystallization and preliminary structural studies of lactose-specific enzyme IIA from Lactococcus lactis. Acta Crystallographica. Section D, Biological Crystallography. 52: 1199-201. PMID 15299586 DOI: 10.1107/S0907444996005926  0.557
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