Piotr Sliz, Ph.D. - Publications

2000- Harvard Medical School, Boston, MA, United States 
Microbiology Biology, Biochemistry

38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Wang L, Rowe RG, Jaimes A, Yu C, Nam Y, Pearson DS, Zhang J, Xie X, Marion W, Heffron GJ, Daley GQ, Sliz P. Small-Molecule Inhibitors Disrupt let-7 Oligouridylation and Release the Selective Blockade of let-7 Processing by LIN28. Cell Reports. 23: 3091-3101. PMID 29874593 DOI: 10.1016/j.celrep.2018.04.116  0.36
2017 Wang L, Nam Y, Lee AK, Yu C, Roth K, Chen C, Ransey EM, Sliz P. LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation. Cell Reports. 18: 2664-2675. PMID 28297670 DOI: 10.1016/j.celrep.2017.02.044  0.36
2016 Meyer PA, Socias S, Key J, Ransey E, Tjon EC, Buschiazzo A, Lei M, Botka C, Withrow J, Neau D, Rajashankar K, Anderson KS, Baxter RH, Blacklow SC, Boggon TJ, ... ... Sliz P, et al. Data publication with the structural biology data grid supports live analysis. Nature Communications. 7: 10882. PMID 26947396 DOI: 10.1038/ncomms10882  0.6
2015 Lelyveld VS, Bjorkbom A, Ransey E, Sliz P, Szostak JW. Pinpointing RNA-protein crosslinks with site-specific stable isotope labeled oligonucleotides. Journal of the American Chemical Society. PMID 26583201 DOI: 10.1021/jacs.5b10596  0.6
2015 Socias SM, Morin A, Timony MA, Sliz P. AppCiter: A Web Application for Increasing Rates and Accuracy of Scientific Software Citation. Structure (London, England : 1993). 23: 807-8. PMID 25955101 DOI: 10.1016/j.str.2015.04.005  0.6
2015 Balch C, Arias-Pulido H, Banerjee S, Lancaster AK, Clark KB, Perilstein M, Hawkins B, Rhodes J, Sliz P, Wilkins J, Chittenden TW. Science and technology consortia in U.S. biomedical research: a paradigm shift in response to unsustainable academic growth. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 119-22. PMID 25387399 DOI: 10.1002/bies.201400167  0.6
2015 Du P, Wang L, Sliz P, Gregory RI. A Biogenesis Step Upstream of Microprocessor Controls miR-17∼92 Expression Cell. 162: 885-899. DOI: 10.1016/j.cell.2015.07.008  0.6
2014 Thornton JE, Du P, Jing L, Sjekloca L, Lin S, Grossi E, Sliz P, Zon LI, Gregory RI. Selective microRNA uridylation by Zcchc6 (TUT7) and Zcchc11 (TUT4). Nucleic Acids Research. 42: 11777-91. PMID 25223788 DOI: 10.1093/nar/gku805  0.6
2014 Derbyshire ER, Zuzarte-Luís V, Magalhães AD, Kato N, Sanschagrin PC, Wang J, Zhou W, Miduturu CV, Mazitschek R, Sliz P, Mota MM, Gray NS, Clardy J. Chemical interrogation of the malaria kinome. Chembiochem : a European Journal of Chemical Biology. 15: 1920-30. PMID 25111632 DOI: 10.1002/cbic.201400025  0.6
2013 Morin A, Eisenbraun B, Key J, Sanschagrin PC, Timony MA, Ottaviano M, Sliz P. Collaboration gets the most out of software. Elife. 2: e01456. PMID 24040512 DOI: 10.7554/eLife.01456  0.6
2013 Sliz P, Morin A. Optimizing peer review of software code. Science (New York, N.Y.). 341: 236-7. PMID 23869002 DOI: 10.1126/science.341.6143.236-b  0.6
2013 Morin A, Sliz P. Structural biology computing: Lessons for the biomedical research sciences. Biopolymers. 99: 809-16. PMID 23828134 DOI: 10.1002/bip.22343  0.6
2012 Morin A, Urban J, Sliz P. A quick guide to software licensing for the scientist-programmer. Plos Computational Biology. 8: e1002598. PMID 22844236 DOI: 10.1371/journal.pcbi.1002598  0.6
2012 Stokes-Rees I, Levesque I, Murphy FV, Yang W, Deacon A, Sliz P. Adapting federated cyberinfrastructure for shared data collection facilities in structural biology. Journal of Synchrotron Radiation. 19: 462-7. PMID 22514186 DOI: 10.1107/S0909049512009776  0.6
2012 Morin A, Urban J, Adams PD, Foster I, Sali A, Baker D, Sliz P. Research priorities. Shining light into black boxes. Science (New York, N.Y.). 336: 159-60. PMID 22499926 DOI: 10.1126/science.1218263  0.6
2012 O'Donovan DJ, Stokes-Rees I, Nam Y, Blacklow SC, Schröder GF, Brunger AT, Sliz P. A grid-enabled web service for low-resolution crystal structure refinement. Acta Crystallographica. Section D, Biological Crystallography. 68: 261-7. PMID 22349228 DOI: 10.1107/S0907444912001163  0.6
2012 Choi SH, Wales TE, Nam Y, O'Donovan DJ, Sliz P, Engen JR, Blacklow SC. Conformational locking upon cooperative assembly of notch transcription complexes. Structure (London, England : 1993). 20: 340-9. PMID 22325781 DOI: 10.1016/j.str.2011.12.011  0.6
2012 Jiang J, Lazarus MB, Pasquina L, Sliz P, Walker S. A neutral diphosphate mimic crosslinks the active site of human O-GlcNAc transferase. Nature Chemical Biology. 8: 72-7. PMID 22082911 DOI: 10.1038/nchembio.711  0.6
2012 Stokes-Rees I, O'Donovan D, Doherty P, Porter-Mahoney M, Sliz P. An integrated science portal for collaborative compute and data intensive protein structure studies 2012 Ieee 8th International Conference On E-Science, E-Science 2012. DOI: 10.1109/eScience.2012.6404425  0.6
2011 Nam Y, Chen C, Gregory RI, Chou JJ, Sliz P. Molecular basis for interaction of let-7 microRNAs with Lin28. Cell. 147: 1080-91. PMID 22078496 DOI: 10.1016/j.cell.2011.10.020  0.6
2011 Lazarus MB, Nam Y, Jiang J, Sliz P, Walker S. Structure of human O-GlcNAc transferase and its complex with a peptide substrate. Nature. 469: 564-7. PMID 21240259 DOI: 10.1038/nature09638  0.6
2010 Stokes-Rees I, Sliz P. Protein structure determination by exhaustive search of Protein Data Bank derived databases. Proceedings of the National Academy of Sciences of the United States of America. 107: 21476-81. PMID 21098306 DOI: 10.1073/pnas.1012095107  0.6
2010 Fuse S, Tsukamoto H, Yuan Y, Wang TS, Zhang Y, Bolla M, Walker S, Sliz P, Kahne D. Functional and structural analysis of a key region of the cell wall inhibitor moenomycin. Acs Chemical Biology. 5: 701-11. PMID 20496948 DOI: 10.1021/cb100048q  0.6
2010 Stokes-Rees I, Sliz P. Compute and data management strategies for grid deployment of high throughput protein structure studies 2010 3rd Workshop On Many-Task Computing On Grids and Supercomputers, Mtags10 0.6
2008 Patel V, Booker M, Kramer M, Ross L, Celatka CA, Kennedy LM, Dvorin JD, Duraisingh MT, Sliz P, Wirth DF, Clardy J. Identification and characterization of small molecule inhibitors of Plasmodium falciparum dihydroorotate dehydrogenase. The Journal of Biological Chemistry. 283: 35078-85. PMID 18842591 DOI: 10.1074/jbc.M804990200  0.6
2008 Yuan Y, Fuse S, Ostash B, Sliz P, Kahne D, Walker S. Structural analysis of the contacts anchoring moenomycin to peptidoglycan glycosyltransferases and implications for antibiotic design. Acs Chemical Biology. 3: 429-36. PMID 18642800 DOI: 10.1021/cb800078a  0.6
2008 Piskounova E, Viswanathan SR, Janas M, LaPierre RJ, Daley GQ, Sliz P, Gregory RI. Determinants of microRNA processing inhibition by the developmentally regulated RNA-binding protein Lin28. The Journal of Biological Chemistry. 283: 21310-4. PMID 18550544 DOI: 10.1074/jbc.C800108200  0.6
2007 Kim S, Malinverni JC, Sliz P, Silhavy TJ, Harrison SC, Kahne D. Structure and function of an essential component of the outer membrane protein assembly machine. Science (New York, N.Y.). 317: 961-4. PMID 17702946 DOI: 10.1126/science.1143993  0.6
2007 Yuan Y, Barrett D, Zhang Y, Kahne D, Sliz P, Walker S. Crystal structure of a peptidoglycan glycosyltransferase suggests a model for processive glycan chain synthesis. Proceedings of the National Academy of Sciences of the United States of America. 104: 5348-53. PMID 17360321 DOI: 10.1073/pnas.0701160104  0.6
2007 Nam Y, Sliz P, Pear WS, Aster JC, Blacklow SC. Cooperative assembly of higher-order Notch complexes functions as a switch to induce transcription. Proceedings of the National Academy of Sciences of the United States of America. 104: 2103-8. PMID 17284587 DOI: 10.1073/pnas.0611092104  0.6
2006 Azam M, Nardi V, Shakespeare WC, Metcalf CA, Bohacek RS, Wang Y, Sundaramoorthi R, Sliz P, Veach DR, Bornmann WG, Clarkson B, Dalgarno DC, Sawyer TK, Daley GQ. Activity of dual SRC-ABL inhibitors highlights the role of BCR/ABL kinase dynamics in drug resistance. Proceedings of the National Academy of Sciences of the United States of America. 103: 9244-9. PMID 16754879 DOI: 10.1073/pnas.0600001103  0.6
2006 Nam Y, Sliz P, Song L, Aster JC, Blacklow SC. Structural basis for cooperativity in recruitment of MAML coactivators to Notch transcription complexes. Cell. 124: 973-83. PMID 16530044 DOI: 10.1016/j.cell.2005.12.037  0.6
2005 Gonen T, Cheng Y, Sliz P, Hiroaki Y, Fujiyoshi Y, Harrison SC, Walz T. Lipid-protein interactions in double-layered two-dimensional AQP0 crystals. Nature. 438: 633-8. PMID 16319884 DOI: 10.1038/nature04321  0.6
2004 Fotin A, Cheng Y, Sliz P, Grigorieff N, Harrison SC, Kirchhausen T, Walz T. Molecular model for a complete clathrin lattice from electron cryomicroscopy. Nature. 432: 573-9. PMID 15502812 DOI: 10.1038/nature03079  0.6
2003 Jin L, Sliz P, Chen L, Macián F, Rao A, Hogan PG, Harrison SC. An asymmetric NFAT1 dimer on a pseudo-palindromic kappa B-like DNA site. Nature Structural Biology. 10: 807-11. PMID 12949491 DOI: 10.1038/nsb975  0.6
2003 Sliz P, Harrison SC, Rosenbaum G. How does radiation damage in protein crystals depend on X-ray dose? Structure (London, England : 1993). 11: 13-9. PMID 12517336 DOI: 10.1016/S0969-2126(02)00910-3  0.6
1997 Sliz P, Engelmann R, Hengstenberg W, Pai EF. The structure of enzyme IIAlactose from Lactococcus lactis reveals a new fold and points to possible interactions of a multicomponent system. Structure (London, England : 1993). 5: 775-88. PMID 9261069  0.6
1996 Sliz P, Schörter KH, De Vos WM, Pai EF. Crystallization and preliminary structural studies of lactose-specific enzyme IIA from Lactococcus lactis. Acta Crystallographica. Section D, Biological Crystallography. 52: 1199-201. PMID 15299586 DOI: 10.1107/S0907444996005926  0.6
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