M Neal Waxham - Publications

The University of Texas Graduate School of Biomedical Sciences at Houston 
Neuroscience Biology, Biochemistry

47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Tripathi S, Waxham MN, Cheung MS, Liu Y. Lessons in Protein Design from Combined Evolution and Conformational Dynamics. Scientific Reports. 5: 14259. PMID 26388515 DOI: 10.1038/srep14259  0.6
2015 Hoffman L, Wang X, Sanabria H, Cheung MS, Putkey JA, Waxham MN. Relative Cosolute Size Influences the Kinetics of Protein-Protein Interactions. Biophysical Journal. 109: 510-20. PMID 26244733 DOI: 10.1016/j.bpj.2015.06.043  0.6
2015 Tripathi S, Wang Q, Zhang P, Hoffman L, Waxham MN, Cheung MS. Conformational frustration in calmodulin-target recognition. Journal of Molecular Recognition : Jmr. 28: 74-86. PMID 25622562 DOI: 10.1002/jmr.2413  0.6
2014 Jin SX, Bartolome C, Arai JA, Hoffman L, Uzturk BG, Kumar-Singh R, Waxham MN, Feig LA. Domain contributions to signaling specificity differences between Ras-guanine nucleotide releasing factor (Ras-GRF) 1 and Ras-GRF2. The Journal of Biological Chemistry. 289: 16551-64. PMID 24755227 DOI: 10.1074/jbc.M114.557959  0.6
2014 Hoffman L, Chandrasekar A, Wang X, Putkey JA, Waxham MN. Neurogranin alters the structure and calcium binding properties of calmodulin. The Journal of Biological Chemistry. 289: 14644-55. PMID 24713697 DOI: 10.1074/jbc.M114.560656  0.6
2013 Wang Q, Zhang P, Hoffman L, Tripathi S, Homouz D, Liu Y, Waxham MN, Cheung MS. Protein recognition and selection through conformational and mutually induced fit. Proceedings of the National Academy of Sciences of the United States of America. 110: 20545-50. PMID 24297894 DOI: 10.1073/pnas.1312788110  0.6
2011 Wang Q, Liang KC, Czader A, Waxham MN, Cheung MS. The effect of macromolecular crowding, ionic strength and calcium binding on calmodulin dynamics. Plos Computational Biology. 7: e1002114. PMID 21829336 DOI: 10.1371/journal.pcbi.1002114  0.6
2011 Byrne MJ, Waxham MN, Kubota Y. The impacts of geometry and binding on CaMKII diffusion and retention in dendritic spines. Journal of Computational Neuroscience. 31: 1-12. PMID 21104309 DOI: 10.1007/s10827-010-0293-9  0.6
2010 Kim SA, Sanabria H, Digman MA, Gratton E, Schwille P, Zipfel WR, Waxham MN. Quantifying translational mobility in neurons: comparison between current optical techniques. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 16409-16. PMID 21147979 DOI: 10.1523/JNEUROSCI.3063-10.2010  0.6
2010 Neumüller KG, Elsayad K, Reisecker JM, Waxham MN, Heinze KG. Photounbinding of calmodulin from a family of CaM binding peptides. Plos One. 5: e14050. PMID 21124984 DOI: 10.1371/journal.pone.0014050  0.6
2010 Swulius MT, Kubota Y, Forest A, Waxham MN. Structure and composition of the postsynaptic density during development. The Journal of Comparative Neurology. 518: 4243-60. PMID 20878786 DOI: 10.1002/cne.22451  0.6
2010 Byrne MJ, Waxham MN, Kubota Y. Cellular dynamic simulator: an event driven molecular simulation environment for cellular physiology. Neuroinformatics. 8: 63-82. PMID 20361275 DOI: 10.1007/s12021-010-9066-x  0.6
2010 Sanabria H, Waxham MN. Transient anomalous subdiffusion: effects of specific and nonspecific probe binding with actin gels. The Journal of Physical Chemistry. B. 114: 959-72. PMID 20038146 DOI: 10.1021/jp9072153  0.6
2009 Byrne MJ, Putkey JA, Waxham MN, Kubota Y. Dissecting cooperative calmodulin binding to CaM kinase II: a detailed stochastic model. Journal of Computational Neuroscience. 27: 621-38. PMID 19609660 DOI: 10.1007/s10827-009-0173-3  0.6
2009 Homouz D, Sanabria H, Waxham MN, Cheung MS. Modulation of calmodulin plasticity by the effect of macromolecular crowding. Journal of Molecular Biology. 391: 933-43. PMID 19577574 DOI: 10.1016/j.jmb.2009.06.073  0.6
2009 Sanabria H, Swulius MT, Kolodziej SJ, Liu J, Waxham MN. {beta}CaMKII regulates actin assembly and structure. The Journal of Biological Chemistry. 284: 9770-80. PMID 19208632 DOI: 10.1074/jbc.M809518200  0.6
2008 Sanabria H, Digman MA, Gratton E, Waxham MN. Spatial diffusivity and availability of intracellular calmodulin. Biophysical Journal. 95: 6002-15. PMID 18820232 DOI: 10.1529/biophysj.108.138974  0.6
2008 Forest A, Swulius MT, Tse JK, Bradshaw JM, Gaertner T, Waxham MN. Role of the N- and C-lobes of calmodulin in the activation of Ca(2+)/calmodulin-dependent protein kinase II. Biochemistry. 47: 10587-99. PMID 18795794 DOI: 10.1021/bi8007033  0.6
2008 Goins AB, Sanabria H, Waxham MN. Macromolecular crowding and size effects on probe microviscosity. Biophysical Journal. 95: 5362-73. PMID 18790853 DOI: 10.1529/biophysj.108.131250  0.6
2008 Park HY, Kim SA, Korlach J, Rhoades E, Kwok LW, Zipfel WR, Waxham MN, Webb WW, Pollack L. Conformational changes of calmodulin upon Ca2+ binding studied with a microfluidic mixer. Proceedings of the National Academy of Sciences of the United States of America. 105: 542-7. PMID 18178620 DOI: 10.1073/pnas.0710810105  0.6
2008 Putkey JA, Waxham MN, Gaertner TR, Brewer KJ, Goldsmith M, Kubota Y, Kleerekoper QK. Acidic/IQ motif regulator of calmodulin. The Journal of Biological Chemistry. 283: 1401-10. PMID 17991744 DOI: 10.1074/jbc.M703831200  0.6
2008 Kubota Y, Putkey JA, Shouval HZ, Waxham MN. IQ-motif proteins influence intracellular free Ca2+ in hippocampal neurons through their interactions with calmodulin. Journal of Neurophysiology. 99: 264-76. PMID 17959737 DOI: 10.1152/jn.00876.2007  0.6
2007 Kubota Y, Putkey JA, Waxham MN. Neurogranin controls the spatiotemporal pattern of postsynaptic Ca2+/CaM signaling. Biophysical Journal. 93: 3848-59. PMID 17704141 DOI: 10.1529/biophysj.107.106849  0.6
2007 Sanabria H, Kubota Y, Waxham MN. Multiple diffusion mechanisms due to nanostructuring in crowded environments. Biophysical Journal. 92: 313-22. PMID 17040979 DOI: 10.1529/biophysj.106.090498  0.6
2006 Pullan L, Mullapudi S, Huang Z, Baldwin PR, Chin C, Sun W, Tsujimoto S, Kolodziej SJ, Stoops JK, Lee JC, Waxham MN, Bean AJ, Penczek PA. The endosome-associated protein Hrs is hexameric and controls cargo sorting as a "master molecule". Structure (London, England : 1993). 14: 661-71. PMID 16615908 DOI: 10.1016/j.str.2006.01.012  0.6
2005 Hudmon A, Lebel E, Roy H, Sik A, Schulman H, Waxham MN, De Koninck P. A mechanism for Ca2+/calmodulin-dependent protein kinase II clustering at synaptic and nonsynaptic sites based on self-association. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 6971-83. PMID 16049173 DOI: 10.1523/JNEUROSCI.4698-04.2005  0.6
2005 Kim SA, Heinze KG, Bacia K, Waxham MN, Schwille P. Two-photon cross-correlation analysis of intracellular reactions with variable stoichiometry. Biophysical Journal. 88: 4319-36. PMID 15792970 DOI: 10.1529/biophysj.104.055319  0.6
2004 Junge HJ, Rhee JS, Jahn O, Varoqueaux F, Spiess J, Waxham MN, Rosenmund C, Brose N. Calmodulin and Munc13 form a Ca2+ sensor/effector complex that controls short-term synaptic plasticity. Cell. 118: 389-401. PMID 15294163 DOI: 10.1016/j.cell.2004.06.029  0.6
2004 Gaertner TR, Putkey JA, Waxham MN. RC3/Neurogranin and Ca2+/calmodulin-dependent protein kinase II produce opposing effects on the affinity of calmodulin for calcium. The Journal of Biological Chemistry. 279: 39374-82. PMID 15262982 DOI: 10.1074/jbc.M405352200  0.6
2004 Gaertner TR, Kolodziej SJ, Wang D, Kobayashi R, Koomen JM, Stoops JK, Waxham MN. Comparative analyses of the three-dimensional structures and enzymatic properties of alpha, beta, gamma and delta isoforms of Ca2+-calmodulin-dependent protein kinase II. The Journal of Biological Chemistry. 279: 12484-94. PMID 14722083 DOI: 10.1074/jbc.M313597200  0.6
2004 Kim SA, Heinze KG, Waxham MN, Schwille P. Intracellular calmodulin availability accessed with two-photon cross-correlation. Proceedings of the National Academy of Sciences of the United States of America. 101: 105-10. PMID 14695888 DOI: 10.1073/pnas.2436461100  0.6
2003 Putkey JA, Kleerekoper Q, Gaertner TR, Waxham MN. A new role for IQ motif proteins in regulating calmodulin function. The Journal of Biological Chemistry. 278: 49667-70. PMID 14551202 DOI: 10.1074/jbc.C300372200  0.6
2001 Kim SA, Hudmon A, Volmer A, Waxham MN. CaM-kinase II dephosphorylates Thr(286) by a reversal of the autophosphorylation reaction. Biochemical and Biophysical Research Communications. 282: 773-80. PMID 11401530 DOI: 10.1006/bbrc.2001.4651  0.6
2001 Hudmon A, Kim SA, Kolb SJ, Stoops JK, Waxham MN. Light scattering and transmission electron microscopy studies reveal a mechanism for calcium/calmodulin-dependent protein kinase II self-association. Journal of Neurochemistry. 76: 1364-75. PMID 11238721 DOI: 10.1046/j.1471-4159.2001.00119.x  0.32
2000 Kolodziej SJ, Hudmon A, Waxham MN, Stoops JK. Three-dimensional reconstructions of calcium/calmodulin-dependent (CaM) kinase IIalpha and truncated CaM kinase IIalpha reveal a unique organization for its structural core and functional domains. The Journal of Biological Chemistry. 275: 14354-9. PMID 10799516 DOI: 10.1074/jbc.275.19.14354  0.6
2000 Flück M, Booth FW, Waxham MN. Skeletal muscle CaMKII enriches in nuclei and phosphorylates myogenic factor SRF at multiple sites Biochemical and Biophysical Research Communications. 270: 488-494. PMID 10753652 DOI: 10.1006/bbrc.2000.2457  0.6
2000 Flück M, Waxham MN, Hamilton MT, Booth FW. Skeletal muscle Ca2+-independent kinase activity increases during either hypertrophy or running Journal of Applied Physiology. 88: 352-358. PMID 10642401  0.6
1999 Costantin JL, Qin N, Waxham MN, Birnbaumer L, Stefani E. Complete reversal of run-down in rabbit cardiac Ca2+ channels by patch-cramming in Xenopus oocytes; partial reversal by protein kinase A. PflüGers Archiv : European Journal of Physiology. 437: 888-94. PMID 10370067 DOI: 10.1007/s004240050859  0.6
1998 Kolb SJ, Hudmon A, Ginsberg TR, Waxham MN. Identification of domains essential for the assembly of calcium/calmodulin-dependent protein kinase II holoenzymes. The Journal of Biological Chemistry. 273: 31555-64. PMID 9813071 DOI: 10.1074/jbc.273.47.31555  0.6
1998 Waxham MN, Tsai AL, Putkey JA. A mechanism for calmodulin (CaM) trapping by CaM-kinase II defined by a family of CaM-binding peptides. The Journal of Biological Chemistry. 273: 17579-84. PMID 9651352  0.6
1996 Putkey JA, Waxham MN. A peptide model for calmodulin trapping by calcium/calmodulin-dependent protein kinase II. The Journal of Biological Chemistry. 271: 29619-23. PMID 8939892  0.6
1996 Hudmon A, Aronowski J, Kolb SJ, Waxham MN. Inactivation and self-association of Ca2+/calmodulin-dependent protein kinase II during autophosphorylation. The Journal of Biological Chemistry. 271: 8800-8. PMID 8621518  0.6
1995 Kolb SJ, Hudmon A, Waxham MN. Ca2+/calmodulin kinase II translocates in a hippocampal slice model of ischemia. Journal of Neurochemistry. 64: 2147-56. PMID 7722499  0.6
1989 Malenka RC, Kauer JA, Perkel DJ, Mauk MD, Kelly PT, Nicoll RA, Waxham MN. An essential role for postsynaptic calmodulin and protein kinase activity in long-term potentiation. Nature. 340: 554-7. PMID 2549423 DOI: 10.1038/340554a0  0.6
1987 Waxham MN, Server AC, Goodman HM, Wolinsky JS. Cloning and sequencing of the mumps virus fusion protein gene. Virology. 159: 381-8. PMID 3617503 DOI: 10.1016/0042-6822(87)90477-6  0.6
1987 Gonzalez-Scarano F, Waxham MN, Ross AM, Hoxie JA. Sequence similarities between human immunodeficiency virus gp41 and paramyxovirus fusion proteins. Aids Research and Human Retroviruses. 3: 245-52. PMID 3501726  0.6
1985 Server AC, Smith JA, Waxham MN, Wolinsky JS, Goodman HM. Purification and amino-terminal protein sequence analysis of the mumps virus fusion protein. Virology. 144: 373-83. PMID 3840621 DOI: 10.1016/0042-6822(85)90279-X  0.6
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