Zhijian (Jake) Tu - Publications

Virginia Polytechnic Institute and State University, Blacksburg, VA, United States 
Molecular Biology, Biochemistry

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Lukyanchikova V, Nuriddinov M, Belokopytova P, Taskina A, Liang J, Reijnders MJMF, Ruzzante L, Feron R, Waterhouse RM, Wu Y, Mao C, Tu Z, Sharakhov IV, Fishman V. Anopheles mosquitoes reveal new principles of 3D genome organization in insects. Nature Communications. 13: 1960. PMID 35413948 DOI: 10.1038/s41467-022-29599-5  0.337
2020 Compton A, Liang J, Chen C, Lukyanchikova V, Qi Y, Potters M, Settlage R, Miller D, Deschamps S, Mao C, Llaca V, Sharakhov IV, Tu Z. The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere. G3 (Bethesda, Md.). PMID 32883756 DOI: 10.1534/G3.120.401654  0.4
2020 Palatini U, Masri RA, Cosme LV, Koren S, Thibaud-Nissen F, Biedler JK, Krsticevic F, Johnston JS, Halbach R, Crawford JE, Antoshechkin I, Failloux AB, Pischedda E, Marconcini M, Ghurye J, ... ... Tu Z, et al. Improved reference genome of the arboviral vector Aedes albopictus. Genome Biology. 21: 215. PMID 32847630 DOI: 10.1186/S13059-020-02141-W  0.403
2020 Kojin BB, Biedler JK, Tu Z, Adelman ZN. Characterization of a female germline and early zygote promoter from the transcription factor bZip1 in the dengue mosquito Aedes aegypti. Parasites & Vectors. 13: 353. PMID 32680549 DOI: 10.1186/S13071-020-04216-W  0.333
2020 Aryan A, Anderson MAE, Biedler JK, Qi Y, Overcash JM, Naumenko AN, Sharakhova MV, Mao C, Adelman ZN, Tu Z. alone is sufficient to convert female into fertile males and is needed for male flight. Proceedings of the National Academy of Sciences of the United States of America. PMID 32661163 DOI: 10.1073/Pnas.2001132117  0.316
2020 Compton A, Sharakhov IV, Tu Z. Recent advances and future perspectives in vector-omics. Current Opinion in Insect Science. 40: 94-103. PMID 32650287 DOI: 10.1016/J.Cois.2020.05.006  0.403
2020 Redmond SN, Sharma A, Sharakhov I, Tu Z, Sharakhova M, Neafsey DE. Linked-read sequencing identifies abundant microinversions and introgression in the arboviral vector Aedes aegypti. Bmc Biology. 18: 26. PMID 32164699 DOI: 10.1186/S12915-020-0757-Y  0.441
2019 Meccariello A, Salvemini M, Primo P, Hall B, Koskinioti P, Dalíková M, Gravina A, Gucciardino MA, Forlenza F, Gregoriou ME, Ippolito D, Monti SM, Petrella V, Perrotta MM, Schmeing S, ... ... Tu Z, et al. () orchestrates male sex determination in major agricultural fruit fly pests. Science (New York, N.Y.). PMID 31467189 DOI: 10.1126/Science.Aax1318  0.365
2019 Li X, Jin B, Dong Y, Chen X, Tu Z, Gu J. Two of the three Transformer-2 genes are required for ovarian development in Aedes albopictus. Insect Biochemistry and Molecular Biology. PMID 30914323 DOI: 10.1016/J.Ibmb.2019.03.008  0.414
2018 Matthews BJ, Dudchenko O, Kingan SB, Koren S, Antoshechkin I, Crawford JE, Glassford WJ, Herre M, Redmond SN, Rose NH, Weedall GD, Wu Y, Batra SS, Brito-Sierra CA, Buckingham SD, ... ... Tu Z, et al. Improved reference genome of Aedes aegypti informs arbovirus vector control. Nature. PMID 30429615 DOI: 10.1038/S41586-018-0692-Z  0.441
2018 Miller JR, Koren S, Dilley KA, Puri V, Brown DM, Harkins DM, Thibaud-Nissen F, Rosen B, Chen XG, Tu Z, Sharakhov IV, Sharakhova MV, Sebra R, Stockwell TB, Bergman NH, et al. Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation. Gigascience. PMID 29329394 DOI: 10.1093/Gigascience/Gix135  0.315
2017 Palatini U, Miesen P, Carballar-Lejarazu R, Ometto L, Rizzo E, Tu Z, van Rij RP, Bonizzoni M. Comparative genomics shows that viral integrations are abundant and express piRNAs in the arboviral vectors Aedes aegypti and Aedes albopictus. Bmc Genomics. 18: 512. PMID 28676109 DOI: 10.1186/S12864-017-3903-3  0.42
2017 Jiang X, Hall AB, Biedler JK, Tu Z. Single molecule RNA sequencing uncovers trans-splicing and improves annotations in Anopheles stephensi. Insect Molecular Biology. PMID 28181326 DOI: 10.1111/Imb.12294  0.425
2016 Prasad TS, Mohanty AK, Kumar M, Sreenivasamurthy SK, Dey G, Nirujogi RS, Pinto SM, Madugundu AK, Patil AH, Advani J, Manda SS, Gupta MK, Dwivedi SB, Kelkar DS, Hall B, ... ... Tu Z, et al. Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes. Genome Research. PMID 28003436 DOI: 10.1101/Gr.201368.115  0.481
2016 Chen B, Wang XH, Tu Z, Huang YP. Leap forward with insect genomics. Insect Science. PMID 27145185 DOI: 10.1111/1744-7917.12355  0.392
2016 Adelman ZN, Tu Z. Control of Mosquito-Borne Infectious Diseases: Sex and Gene Drive. Trends in Parasitology. 32: 219-29. PMID 26897660 DOI: 10.1016/J.Pt.2015.12.003  0.34
2016 Gulia-Nuss M, Nuss AB, Meyer JM, Sonenshine DE, Roe RM, Waterhouse RM, Sattelle DB, de la Fuente J, Ribeiro JM, Megy K, Thimmapuram J, Miller JR, Walenz BP, Koren S, Hostetler JB, ... ... Tu Z, et al. Genomic insights into the Ixodes scapularis tick vector of Lyme disease. Nature Communications. 7: 10507. PMID 26856261 DOI: 10.1038/Ncomms10507  0.447
2016 Biedler JK, Tu Z. Sex Determination in Mosquitoes Advances in Insect Physiology. DOI: 10.1016/Bs.Aiip.2016.05.005  0.38
2015 Hall AB, Basu S, Jiang X, Qi Y, Timoshevskiy VA, Biedler JK, Sharakhova MV, Elahi R, Anderson MA, Chen XG, Sharakhov IV, Adelman ZN, Tu Z. SEX DETERMINATION. A male-determining factor in the mosquito Aedes aegypti. Science (New York, N.Y.). 348: 1268-70. PMID 25999371 DOI: 10.1126/Science.Aaa2850  0.328
2015 Biedler JK, Chen X, Tu Z. Horizontal transmission of an R4 clade non-long terminal repeat retrotransposon between the divergent Aedes and Anopheles mosquito genera. Insect Molecular Biology. 24: 331-7. PMID 25615532 DOI: 10.1111/Imb.12160  0.389
2015 Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, ... ... Tu Z, et al. Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes. Science (New York, N.Y.). 347: 1258522. PMID 25554792 DOI: 10.1126/Science.1258522  0.501
2015 Biedler JK, Qi Y, Pledger D, James AA, Tu Z. Maternal germline-specific genes in the Asian malaria mosquito Anopheles stephensi: characterization and application for disease control. G3 (Bethesda, Md.). 5: 157-66. PMID 25480960 DOI: 10.1534/G3.114.015578  0.418
2014 Jiang X, Peery A, Hall AB, Sharma A, Chen XG, Waterhouse RM, Komissarov A, Riehle MM, Shouche Y, Sharakhova MV, Lawson D, Pakpour N, Arensburger P, Davidson VL, Eiglmeier K, ... ... Tu Z, et al. Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi. Genome Biology. 15: 459. PMID 25244985 DOI: 10.1186/S13059-014-0459-2  0.379
2014 Watanabe J, Hattori M, Berriman M, Lehane MJ, Hall N, Solano P, Aksoy S, Hide W, Touré Y, Attardo GM, Darby AC, Toyoda A, Hertz-Fowler C, Larkin DM, Cotton JA, ... ... Tu Z, et al. Genome sequence of the tsetse fly (Glossina morsitans ): Vector of African trypanosomiasis Science. 344: 380-386. PMID 24763584 DOI: 10.1126/Science.1249656  0.525
2014 Timoshevskiy VA, Kinney NA, deBruyn BS, Mao C, Tu Z, Severson DW, Sharakhov IV, Sharakhova MV. Genomic composition and evolution of Aedes aegypti chromosomes revealed by the analysis of physically mapped supercontigs. Bmc Biology. 12: 27. PMID 24731704 DOI: 10.1186/1741-7007-12-27  0.419
2014 Marinotti O, Ngo T, Kojin BB, Chou SP, Nguyen B, Juhn J, Carballar-Lejarazú R, Marinotti PN, Jiang X, Walter MF, Tu Z, Gershon PD, James AA. Integrated proteomic and transcriptomic analysis of the Aedes aegypti eggshell. Bmc Developmental Biology. 14: 15. PMID 24707823 DOI: 10.1186/1471-213X-14-15  0.402
2014 Kamali M, Marek PE, Peery A, Antonio-Nkondjio C, Ndo C, Tu Z, Simard F, Sharakhov IV. Multigene phylogenetics reveals temporal diversification of major African malaria vectors. Plos One. 9: e93580. PMID 24705448 DOI: 10.1371/Journal.Pone.0093580  0.492
2014 Xu Y, Jiang N, Zou Z, Tu Z, Chen A, Zhao Q, Xiang Z, He N. Retrotransposon "Qian" mediated segmental duplication in silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology. 46: 9-16. PMID 24462715 DOI: 10.1016/J.Ibmb.2014.01.002  0.408
2014 Hall AB, Timoshevskiy VA, Sharakhova MV, Jiang X, Basu S, Anderson MA, Hu W, Sharakhov IV, Adelman ZN, Tu Z. Insights into the preservation of the homomorphic sex-determining chromosome of Aedes aegypti from the discovery of a male-biased gene tightly linked to the M-locus. Genome Biology and Evolution. 6: 179-91. PMID 24398378 DOI: 10.1093/Gbe/Evu002  0.409
2013 Pakpour N, Camp L, Smithers HM, Wang B, Tu Z, Nadler SA, Luckhart S. Protein kinase C-dependent signaling controls the midgut epithelial barrier to malaria parasite infection in anopheline mosquitoes. Plos One. 8: e76535. PMID 24146884 DOI: 10.1371/Journal.Pone.0076535  0.387
2013 Deng Y, Yan H, Gu J, Xu J, Wu K, Tu Z, James AA, Chen X. Molecular and functional characterization of odorant-binding protein genes in an invasive vector mosquito, Aedes albopictus. Plos One. 8: e68836. PMID 23935894 DOI: 10.1371/Journal.Pone.0068836  0.455
2013 Criscione F, Qi Y, Saunders R, Hall B, Tu Z. A unique Y gene in the Asian malaria mosquito Anopheles stephensi encodes a small lysine‐rich protein and is transcribed at the onset of embryonic development Insect Molecular Biology. 22: 433-441. PMID 23683123 DOI: 10.1111/Imb.12034  0.484
2013 Hall AB, Qi Y, Timoshevskiy V, Sharakhova MV, Sharakhov IV, Tu Z. Six novel Y chromosome genes in Anopheles mosquitoes discovered by independently sequencing males and females. Bmc Genomics. 14: 273. PMID 23617698 DOI: 10.1186/1471-2164-14-273  0.397
2012 Kamali M, Xia A, Tu Z, Sharakhov IV. A new chromosomal phylogeny supports the repeated origin of vectorial capacity in malaria mosquitoes of the Anopheles gambiae complex. Plos Pathogens. 8: e1002960. PMID 23055932 DOI: 10.1371/Journal.Ppat.1002960  0.411
2012 Mead EA, Li M, Tu Z, Zhu J. Translational regulation of Anopheles gambiae mRNAs in the midgut during Plasmodium falciparum infection. Bmc Genomics. 13: 366. PMID 22857387 DOI: 10.1186/1471-2164-13-366  0.338
2012 Biedler JK, Hu W, Tae H, Tu Z. Identification of early zygotic genes in the yellow fever mosquito Aedes aegypti and discovery of a motif involved in early zygotic genome activation. Plos One. 7: e33933. PMID 22457801 DOI: 10.1371/Journal.Pone.0033933  0.45
2011 Kamali M, Sharakhova MV, Baricheva E, Karagodin D, Tu Z, Sharakhov IV. An integrated chromosome map of microsatellite markers and inversion breakpoints for an Asian malaria mosquito, Anopheles stephensi. The Journal of Heredity. 102: 719-26. PMID 21810771 DOI: 10.1093/Jhered/Esr072  0.32
2011 Sengul MS, Ignell R, Hansson B, Tu Z. Anopheles stephensi antennal transcriptome analysis Current Opinion in Biotechnology. 22: S57. DOI: 10.1016/J.Copbio.2011.05.157  0.326
2010 Sengul MS, Tu Z. Expression analysis and knockdown of two antennal odorant-binding protein genes in Aedes aegypti. Journal of Insect Science (Online). 10: 171. PMID 21062207 DOI: 10.1673/031.010.14131  0.755
2010 Sharakhova MV, Xia A, Tu Z, Shouche YS, Unger MF, Sharakhov IV. A physical map for an Asian malaria mosquito, Anopheles stephensi. The American Journal of Tropical Medicine and Hygiene. 83: 1023-7. PMID 21036831 DOI: 10.4269/Ajtmh.2010.10-0366  0.369
2010 Biedler JK, Tu Z. Evolutionary analysis of the kinesin light chain genes in the yellow fever mosquito Aedes aegypti: gene duplication as a source for novel early zygotic genes. Bmc Evolutionary Biology. 10: 206. PMID 20615250 DOI: 10.1186/1471-2148-10-206  0.423
2010 Xia A, Sharakhova MV, Leman SC, Tu Z, Bailey JA, Smith CD, Sharakhov IV. Genome landscape and evolutionary plasticity of chromosomes in malaria mosquitoes. Plos One. 5: e10592. PMID 20485676 DOI: 10.1371/Journal.Pone.0010592  0.366
2010 Zhang X, Luckhart S, Tu Z, Pfeiffer DG. Analysis of Wolbachia strains associated with Conotrachelus nenuphar (Coleoptera: Curculionidae) in the Eastern United States. Environmental Entomology. 39: 396-405. PMID 20388268 DOI: 10.1603/En09276  0.304
2010 Sengul MS, Tu Z. Identification and characterization of odorant-binding protein 1 gene from the Asian malaria mosquito, Anopheles stephensi. Insect Molecular Biology. 19: 49-60. PMID 19909381 DOI: 10.1111/J.1365-2583.2009.00929.X  0.768
2009 Struchiner CJ, Massad E, Tu Z, Ribeiro JM. The tempo and mode of evolution of transposable elements as revealed by molecular phylogenies reconstructed from mosquito genomes. Evolution; International Journal of Organic Evolution. 63: 3136-46. PMID 19656180 DOI: 10.1111/J.1558-5646.2009.00788.X  0.393
2008 Sengul MS, Tu Z. Characterization and expression of the odorant-binding protein 7 gene in Anopheles stephensi and comparative analysis among five mosquito species. Insect Molecular Biology. 17: 631-45. PMID 18811600 DOI: 10.1111/J.1365-2583.2008.00837.X  0.783
2008 Santolamazza F, Mancini E, Simard F, Qi Y, Tu Z, della Torre A. Insertion polymorphisms of SINE200 retrotransposons within speciation islands of Anopheles gambiae molecular forms. Malaria Journal. 7: 163. PMID 18724871 DOI: 10.1186/1475-2875-7-163  0.327
2008 Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, ... ... Tu Z, et al. The genome of the model beetle and pest Tribolium castaneum. Nature. 452: 949-55. PMID 18362917 DOI: 10.1038/Nature06784  0.442
2008 Zhang X, Tu Z, Luckhart S, Pfeiffer DG. Genetic diversity of plum curculio (Coleoptera: Curculionidae) among geographical populations in the eastern United States Annals of the Entomological Society of America. 101: 824-832. DOI: 10.1603/0013-8746(2008)101[824:Gdopcc]2.0.Co;2  0.365
2007 Biedler JK, Shao H, Tu Z. Evolution and horizontal transfer of a DD37E DNA transposon in mosquitoes. Genetics. 177: 2553-8. PMID 17947403 DOI: 10.1534/Genetics.107.081109  0.448
2007 Biedler JK, Tu Z. The Juan non-LTR retrotransposon in mosquitoes: genomic impact, vertical transmission and indications of recent and widespread activity. Bmc Evolutionary Biology. 7: 112. PMID 17620143 DOI: 10.1186/1471-2148-7-112  0.383
2007 Coy MR, Tu Z. Genomic and evolutionary analyses of Tango transposons in Aedes aegypti, Anopheles gambiae and other mosquito species. Insect Molecular Biology. 16: 411-21. PMID 17506852 DOI: 10.1111/J.1365-2583.2007.00735.X  0.771
2005 Coy MR, Tu Z. Gambol and Tc1 are two distinct families of DD34E transposons: analysis of the Anopheles gambiae genome expands the diversity of the IS630-Tc1-mariner superfamily. Insect Molecular Biology. 14: 537-46. PMID 16164609 DOI: 10.1111/J.1365-2583.2005.00584.X  0.764
2005 della Torre A, Tu Z, Petrarca V. On the distribution and genetic differentiation of Anopheles gambiae s.s. molecular forms. Insect Biochemistry and Molecular Biology. 35: 755-69. PMID 15894192 DOI: 10.1016/J.Ibmb.2005.02.006  0.319
2004 Tu Z, Li S, Mao C. The changing tails of a novel short interspersed element in Aedes aegypti: genomic evidence for slippage retrotransposition and the relationship between 3' tandem repeats and the poly(dA) tail. Genetics. 168: 2037-47. PMID 15611173 DOI: 10.1534/Genetics.104.032045  0.414
2004 Tu Z, Coates C. Mosquito transposable elements. Insect Biochemistry and Molecular Biology. 34: 631-44. PMID 15242704 DOI: 10.1016/J.Ibmb.2004.03.016  0.45
2003 Biedler J, Tu Z. Non-LTR retrotransposons in the African malaria mosquito, Anopheles gambiae: unprecedented diversity and evidence of recent activity. Molecular Biology and Evolution. 20: 1811-25. PMID 12832632 DOI: 10.1093/Molbev/Msg189  0.76
2003 Biedler J, Qi Y, Holligan D, della Torre A, Wessler S, Tu Z. Transposable element (TE) display and rapid detection of TE insertion polymorphism in the Anopheles gambiae species complex. Insect Molecular Biology. 12: 211-6. PMID 12752653 DOI: 10.1046/J.1365-2583.2003.00403.X  0.759
2002 Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskern DR, Wincker P, Clark AG, Ribeiro JM, Wides R, Salzberg SL, Loftus B, Yandell M, Majoros WH, Rusch DB, ... ... Tu Z, et al. The genome sequence of the malaria mosquito Anopheles gambiae. Science (New York, N.Y.). 298: 129-49. PMID 12364791 DOI: 10.1126/Science.1076181  0.767
2002 Tu Z, Shao H. Intra- and inter-specific diversity of Tc3-like transposons in nematodes and insects and implications for their evolution and transposition. Gene. 282: 133-42. PMID 11814685 DOI: 10.1016/S0378-1119(01)00841-1  0.321
2002 Pimentel-Smith GE, Shi L, Drummond P, Tu Z, Smith EJ. Amplification of sequence tagged sites in five avian species using heterologous oligonucleotides. Genetica. 110: 219-26. PMID 11766842 DOI: 10.1023/A:1012772831699  0.401
2001 Shao H, Qi Y, Tu Z. MsqTc3, a Tc3-like transposon in the yellow fever mosquito Aedes aegypti. Insect Molecular Biology. 10: 421-425. PMID 11881806 DOI: 10.1046/J.0962-1075.2001.00280.X  0.461
2001 Tu Z. Maque, a family of extremely short interspersed repetitive elements: Characterization, possible mechanism of transposition, and evolutionary implications Gene. 263: 247-253. PMID 11223264 DOI: 10.1016/S0378-1119(00)00561-8  0.36
2001 Tu Z. Eight novel families of miniature inverted repeat transposable elements in the African malaria mosquito, Anopheles gambiae Proceedings of the National Academy of Sciences. 98: 1699-1704. DOI: 10.1073/Pnas.98.4.1699  0.52
2000 Tu Z. Molecular and evolutionary analysis of two divergent subfamilies of a novel miniature inverted repeat transposable element in the yellow fever mosquito, Aedes aegypti Molecular Biology and Evolution. 17: 1313-1325. PMID 10958848 DOI: 10.1093/oxfordjournals.molbev.a026415  0.42
1999 Tu Z, Hill JJ. MosquI, a novel family of mosquito retrotransposons distantly related to the Drosophila I factors, may consist of elements of more than one origin Molecular Biology and Evolution. 16: 1675-1686. PMID 10605110 DOI: 10.1093/oxfordjournals.molbev.a026081  0.361
1998 Hagedorn HH, Maddison DR, Tu Z. The Evolution of Vitellogenins, Cyclorrhaphan Yolk Proteins and Related Molecules Advances in Insect Physiology. 27: 335-384. DOI: 10.1016/S0065-2806(08)60015-6  0.702
1997 Tu Z. Three novel families of miniature inverted-repeat transposable elements are associated with genes of the yellow fever mosquito, aedes aegypti Proceedings of the National Academy of Sciences of the United States of America. 94: 7475-7480. PMID 9207116 DOI: 10.1073/Pnas.94.14.7475  0.484
1997 Tu Z, Hagedorn HH. Biochemical, molecular, and phylogenetic analysis of pyruvate carboxylase in the yellow fever mosquito, Aedes aegypti Insect Biochemistry and Molecular Biology. 27: 133-147. PMID 9066123 DOI: 10.1016/S0965-1748(96)00078-1  0.713
1997 Tu Z, Byrne DN, Hagedorn HH. Vitellin of the sweet potato whitefly, Bemisia tabaci: biochemical characterization and titer changes in the adult. Archives of Insect Biochemistry and Physiology. 34: 223-37. PMID 9041698 DOI: 10.1002/(Sici)1520-6327(1997)34:2<223::Aid-Arch7>3.0.Co;2-X  0.624
1995 Romans P, Tu Z, Ke Z, Hagedorn HH. Analysis of a vitellogenin gene of the mosquito, Aedes aegypti and comparisons to vitellogenins from other organisms Insect Biochemistry and Molecular Biology. 25: 939-958. PMID 7550249 DOI: 10.1016/0965-1748(95)00037-V  0.732
1992 Tu Z, Hagedorn HH. Purification and characterization of pyruvate carboxylase from the honeybee and some properties of related biotin-containing proteins in other insects Archives of Insect Biochemistry and Physiology. 19: 53-66. DOI: 10.1002/Arch.940190106  0.646
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