| Year |
Citation |
Score |
| 2021 |
Dantuluri S, Schwer B, Abdullahu L, Damha MJ, Shuman S. Activity and substrate specificity of , , and Tpt1: essential tRNA splicing enzymes and potential anti-fungal targets. Rna (New York, N.Y.). PMID 33509912 DOI: 10.1261/rna.078660.120 |
0.32 |
|
| 2020 |
Paudel BP, Moye AL, Abou Assi H, El-Khoury R, Cohen S, Holien JK, Birrento ML, Samosorn S, Intharapichai K, Tomlinson CG, Teulade-Fichou MP, González C, Beck JL, Damha MJ, van Oijen AM, et al. A mechanism for the extension and unfolding of parallel G-quadruplexes by human telomerase at single-molecule resolution. Elife. 9. PMID 32723475 DOI: 10.7554/eLife.56428 |
0.52 |
|
| 2020 |
Dantuluri S, Abdullahu L, Munir A, Katolik A, Damha MJ, Shuman S. Substrate analogs that trap the 2'-phospho-ADP-ribosylated RNA intermediate of the Tpt1 (tRNA 2'-phosphotransferase) reaction pathway. Rna (New York, N.Y.). PMID 31932322 DOI: 10.1261/rna.074377.119 |
0.32 |
|
| 2019 |
Munir A, Abdullahu L, Banerjee A, Damha MJ, Shuman S. NAD-dependent RNA terminal 2' and 3' phosphomonoesterase activity of a sub-set of Tpt1 enzymes. Rna (New York, N.Y.). PMID 31019096 DOI: 10.1261/rna.071142.119 |
0.32 |
|
| 2019 |
Banerjee A, Munir A, Abdullahu L, Damha MJ, Goldgur Y, Shuman S. Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO recognition and ADP-ribosylation. Nature Communications. 10: 218. PMID 30644400 DOI: 10.1038/s41467-018-08211-9 |
0.32 |
|
| 2018 |
Abou Assi H, Garavís M, González C, Damha MJ. i-Motif DNA: structural features and significance to cell biology. Nucleic Acids Research. PMID 30124962 DOI: 10.1093/nar/gky735 |
0.52 |
|
| 2018 |
Munir A, Abdullahu L, Damha M, Shuman S. Two-step mechanism and step-arrest mutants of Runella slithyformis NAD-dependent tRNA 2'-phosphotransferase Tpt1. Rna (New York, N.Y.). PMID 29884622 DOI: 10.1261/rna.067165.118 |
0.32 |
|
| 2018 |
Habibian M, Yahyaee-Anzahaee M, Lucic M, Moroz E, Martín-Pintado N, Di Giovanni LD, Leroux JC, Hall J, González C, Damha MJ. Structural properties and gene-silencing activity of chemically modified DNA-RNA hybrids with parallel orientation. Nucleic Acids Research. PMID 29373740 DOI: 10.1093/nar/gky024 |
0.52 |
|
| 2017 |
Assi HA, El-Khoury R, González C, Damha MJ. 2'-Fluoroarabinonucleic acid modification traps G-quadruplex and i-motif structures in human telomeric DNA. Nucleic Acids Research. PMID 29040679 DOI: 10.1093/nar/gkx962 |
0.52 |
|
| 2017 |
Abou Assi H, El-Khoury R, González C, Damha MJ. 2'-Fluoroarabinonucleic acid modification traps G-quadruplex and i-motif structures in human telomeric DNA. Nucleic Acids Research. PMID 29036537 DOI: 10.1093/nar/gkx838 |
0.52 |
|
| 2017 |
Lietard J, Abou Assi H, Gómez-Pinto I, González C, Somoza MM, Damha MJ. Mapping the affinity landscape of Thrombin-binding aptamers on 2'F-ANA/DNA chimeric G-Quadruplex microarrays. Nucleic Acids Research. PMID 28100695 DOI: 10.1093/nar/gkw1357 |
0.52 |
|
| 2016 |
Assi HA, Harkness RW, Martin-Pintado N, Wilds CJ, Campos-Olivas R, Mittermaier AK, González C, Damha MJ. Stabilization of i-motif structures by 2'-β-fluorination of DNA. Nucleic Acids Research. PMID 27166371 DOI: 10.1093/nar/gkw402 |
1 |
|
| 2016 |
Kulkarni AS, Damha MJ, Schinazi RF, Mo H, Doehle B, Sagan SM, Götte M. A complex network of interactions between S282 and G283 of HCV NS5B and the template strand affect susceptibility to Sofosbuvir and Ribavirin. Antimicrobial Agents and Chemotherapy. PMID 26824949 DOI: 10.1128/AAC.02436-15 |
0.32 |
|
| 2015 |
Habibian M, Martínez-Montero S, Portella G, Chua Z, Bohle DS, Orozco M, Damha MJ. Seven-Membered Ring Nucleoside Analogues: Stereoselective Synthesis and Studies on Their Conformational Properties. Organic Letters. 17: 5416-9. PMID 26492193 DOI: 10.1021/acs.orglett.5b02769 |
0.32 |
|
| 2015 |
Tago N, Katolik A, Clark NE, Montemayor EJ, Seio K, Sekine M, Hart PJ, Damha MJ. Design, Synthesis, and Properties of Phosphoramidate 2',5'-Linked Branched RNA: Toward the Rational Design of Inhibitors of the RNA Lariat Debranching Enzyme. The Journal of Organic Chemistry. 80: 10108-18. PMID 26378468 DOI: 10.1021/acs.joc.5b01719 |
0.32 |
|
| 2015 |
Yamada K, Wahba AS, Bernatchez JA, Ilina T, Martínez-Montero S, Habibian M, Deleavey GF, Götte M, Parniak MA, Damha MJ. Nucleotide Sugar Pucker Preference Mitigates Excision by HIV-1 RT. Acs Chemical Biology. 10: 2024-33. PMID 26131619 DOI: 10.1021/acschembio.5b00263 |
0.64 |
|
| 2015 |
Martínez-Montero S, Deleavey GF, Martín-Pintado N, Fakhoury JF, González C, Damha MJ. Locked 2'-Deoxy-2',4'-Difluororibo Modified Nucleic Acids: Thermal Stability, Structural Studies, and siRNA Activity. Acs Chemical Biology. PMID 26053215 DOI: 10.1021/acschembio.5b00218 |
0.32 |
|
| 2015 |
Martínez-Montero S, Deleavey GF, Dierker-Viik A, Lindovska P, Ilina T, Portella G, Orozco M, Parniak MA, González C, Damha MJ. Synthesis and properties of 2'-deoxy-2',4'-difluoroarabinose-modified nucleic acids. The Journal of Organic Chemistry. 80: 3083-91. PMID 25723361 DOI: 10.1021/jo502948t |
0.64 |
|
| 2015 |
Yamada K, Wahba AS, Bernatchez JA, Ilina T, Martínez-Montero S, Habibian M, Deleavey GF, Götte M, Parniak MA, Damha MJ. Nucleotide Sugar Pucker Preference Mitigates Excision by HIV-1 RT Acs Chemical Biology. 10: 2024-2033. DOI: 10.1021/acschembio.5b00263 |
0.32 |
|
| 2015 |
Abou Assi H, Martínez-Montero S, Dixit DM, Chua Z, Bohle DS, Damha MJ. Synthesis, structure, and conformational analysis of nucleoside analogues comprising six-membered 1,3-oxathiane sugar rings European Journal of Organic Chemistry. 2015: 1945-1953. DOI: 10.1002/ejoc.201403642 |
0.32 |
|
| 2014 |
Lietard J, Hassler MR, Fakhoury J, Damha MJ. An orthogonal photolabile linker for the complete "on-support" synthesis/fast deprotection/hybridization of RNA. Chemical Communications (Cambridge, England). 50: 15063-6. PMID 25329642 DOI: 10.1039/c4cc07153k |
0.32 |
|
| 2014 |
Lietard J, Kretschy N, Sack M, Wahba AS, Somoza MM, Damha MJ. Base-cleavable microarrays for the characterization of DNA and RNA oligonucleotides synthesized in situ by photolithography. Chemical Communications (Cambridge, England). 50: 12903-6. PMID 25213224 DOI: 10.1039/c4cc05771f |
0.32 |
|
| 2014 |
Anzahaee MY, Deleavey GF, Le PU, Fakhoury J, Petrecca K, Damha MJ. Arabinonucleic acids: 2'-stereoisomeric modulators of siRNA activity. Nucleic Acid Therapeutics. 24: 336-43. PMID 25162466 DOI: 10.1089/nat.2014.0496 |
0.32 |
|
| 2014 |
Montemayor EJ, Katolik A, Clark NE, Taylor AB, Schuermann JP, Combs DJ, Johnsson R, Holloway SP, Stevens SW, Damha MJ, Hart PJ. Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1. Nucleic Acids Research. 42: 10845-55. PMID 25123664 DOI: 10.1093/nar/gku725 |
0.32 |
|
| 2014 |
Garrey SM, Katolik A, Prekeris M, Li X, York K, Bernards S, Fields S, Zhao R, Damha MJ, Hesselberth JR. A homolog of lariat-debranching enzyme modulates turnover of branched RNA. Rna (New York, N.Y.). 20: 1337-48. PMID 24919400 DOI: 10.1261/rna.044602.114 |
0.32 |
|
| 2014 |
Martínez-Montero S, Deleavey GF, Kulkarni A, Martín-Pintado N, Lindovska P, Thomson M, González C, Götte M, Damha MJ. Rigid 2',4'-difluororibonucleosides: synthesis, conformational analysis, and incorporation into nascent RNA by HCV polymerase. The Journal of Organic Chemistry. 79: 5627-35. PMID 24873952 DOI: 10.1021/jo500794v |
0.52 |
|
| 2014 |
Katolik A, Johnsson R, Montemayor E, Lackey JG, Hart PJ, Damha MJ. Regiospecific solid-phase synthesis of branched oligoribonucleotides that mimic intronic lariat RNA intermediates. The Journal of Organic Chemistry. 79: 963-75. PMID 24401015 DOI: 10.1021/jo4024182 |
0.32 |
|
| 2014 |
Dudley A, Sater M, Le PU, Trinh G, Sadr MS, Bergeron J, Deleavey GF, Bedell B, Damha MJ, Petrecca K. DRR regulates AKT activation to drive brain cancer invasion. Oncogene. 33: 4952-60. PMID 24141773 DOI: 10.1038/onc.2013.436 |
0.32 |
|
| 2013 |
Martin-Pintado N, Deleavey GF, Portella G, Campos-Olivas R, Orozco M, Damha MJ, González C. Backbone FC-H···O hydrogen bonds in 2'F-substituted nucleic acids. Angewandte Chemie (International Ed. in English). 52: 12065-8. PMID 24115468 DOI: 10.1002/anie.201305710 |
0.52 |
|
| 2013 |
Chan DPY, Deleavey GF, Owen SC, Damha MJ, Shoichet MS. Click conjugated polymeric immuno-nanoparticles for targeted siRNA and antisense oligonucleotide delivery Biomaterials. 34: 8408-8415. PMID 23932248 DOI: 10.1016/j.biomaterials.2013.07.019 |
0.32 |
|
| 2013 |
Martín-Pintado N, Yahyaee-Anzahaee M, Deleavey GF, Portella G, Orozco M, Damha MJ, González C. Dramatic effect of furanose C2' substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom. Journal of the American Chemical Society. 135: 5344-7. PMID 23521511 DOI: 10.1021/ja401954t |
0.52 |
|
| 2013 |
Deleavey GF, Frank F, Hassler M, Wisnovsky S, Nagar B, Damha MJ. The 5' binding MID domain of human Argonaute2 tolerates chemically modified nucleotide analogues. Nucleic Acid Therapeutics. 23: 81-7. PMID 23289589 DOI: 10.1089/nat.2012.0393 |
0.32 |
|
| 2012 |
Souleimanian N, Deleavey GF, Soifer H, Wang S, Tiemann K, Damha MJ, Stein CA. Antisense 2'-Deoxy, 2'-Fluroarabino Nucleic Acids (2'F-ANAs) Oligonucleotides: In Vitro Gymnotic Silencers of Gene Expression Whose Potency Is Enhanced by Fatty Acids. Molecular Therapy. Nucleic Acids. 1: e43. PMID 23344235 DOI: 10.1038/mtna.2012.35 |
0.32 |
|
| 2012 |
Martín-Pintado N, Yahyaee-Anzahaee M, Campos-Olivas R, Noronha AM, Wilds CJ, Damha MJ, González C. The solution structure of double helical arabino nucleic acids (ANA and 2'F-ANA): effect of arabinoses in duplex-hairpin interconversion. Nucleic Acids Research. 40: 9329-39. PMID 22798499 DOI: 10.1093/nar/gks672 |
1 |
|
| 2011 |
Anzahaee MY, Watts JK, Alla NR, Nicholson AW, Damha MJ. Energetically important C-H···F-C pseudohydrogen bonding in water: evidence and application to rational design of oligonucleotides with high binding affinity. Journal of the American Chemical Society. 133: 728-31. PMID 21171597 DOI: 10.1021/ja109817p |
0.32 |
|
| 2010 |
Gagnon KT, Pendergraff HM, Deleavey GF, Swayze EE, Potier P, Randolph J, Roesch EB, Chattopadhyaya J, Damha MJ, Bennett CF, Montaillier C, Lemaitre M, Corey DR. Allele-selective inhibition of mutant huntingtin expression with antisense oligonucleotides targeting the expanded CAG repeat. Biochemistry. 49: 10166-78. PMID 21028906 DOI: 10.1021/bi101208k |
0.32 |
|
| 2010 |
Deleavey GF, Watts JK, Alain T, Robert F, Kalota A, Aishwarya V, Pelletier J, Gewirtz AM, Sonenberg N, Damha MJ. Synergistic effects between analogs of DNA and RNA improve the potency of siRNA-mediated gene silencing. Nucleic Acids Research. 38: 4547-57. PMID 20413581 DOI: 10.1093/nar/gkq181 |
0.32 |
|
| 2010 |
Watts JK, Martín-Pintado N, Gómez-Pinto I, Schwartzentruber J, Portella G, Orozco M, González C, Damha MJ. Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility. Nucleic Acids Research. 38: 2498-511. PMID 20071751 DOI: 10.1093/nar/gkp1225 |
0.52 |
|
| 2009 |
Lackey JG, Mitra D, Somoza MM, Cerrina F, Damha MJ. Acetal levulinyl ester (ALE) groups for 2'-hydroxyl protection of ribonucleosides in the synthesis of oligoribonucleotides on glass and microarrays. Journal of the American Chemical Society. 131: 8496-502. PMID 19485360 DOI: 10.1021/ja9002074 |
0.32 |
|
| 2008 |
Lackey JG, Ron D, Damha MJ, Harding HP. Toward the discovery of new antifungal agents: the design and validation of a novel 2'P-RNA probe and high throughput screening assay against 2'-phosphotransferase Tpt1p. Nucleic Acids Symposium Series (2004). 475-6. PMID 18776460 DOI: 10.1093/nass/nrn241 |
0.32 |
|
| 2008 |
Harding HP, Lackey JG, Hsu HC, Zhang Y, Deng J, Xu RM, Damha MJ, Ron D. An intact unfolded protein response in Trpt1 knockout mice reveals phylogenic divergence in pathways for RNA ligation. Rna (New York, N.Y.). 14: 225-32. PMID 18094117 DOI: 10.1261/rna.859908 |
0.32 |
|
| 2007 |
Mitra D, Damha MJ. A novel approach to the synthesis of DNA and RNA lariats. The Journal of Organic Chemistry. 72: 9491-500. PMID 17979285 DOI: 10.1021/jo701418w |
0.32 |
|
| 2006 |
Ferrari N, Bergeron D, Tedeschi AL, Mangos MM, Paquet L, Renzi PM, Damha MJ. Characterization of antisense oligonucleotides comprising 2'-deoxy-2'-fluoro-beta-D-arabinonucleic acid (FANA): specificity, potency, and duration of activity. Annals of the New York Academy of Sciences. 1082: 91-102. PMID 17145930 DOI: 10.1196/annals.1348.032 |
0.84 |
|
| 2006 |
Gendron D, Carriero S, Garneau D, Villemaire J, Klinck R, Elela SA, Damha MJ, Chabot B. Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals. Bmc Biotechnology. 6: 5. PMID 16412215 DOI: 10.1186/1472-6750-6-5 |
0.32 |
|
| 2005 |
Hannoush RN, Damha MJ. Preference for ribose over deoxyribose in loop-closing base pairs of extra stable nucleic acid hairpins. Nucleosides, Nucleotides & Nucleic Acids. 24: 1519-30. PMID 16438032 DOI: 10.1080/15257770500265794 |
0.44 |
|
| 2005 |
Khalid MF, Damha MJ, Shuman S, Schwer B. Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase. Nucleic Acids Research. 33: 6349-60. PMID 16275784 DOI: 10.1093/nar/gki934 |
0.32 |
|
| 2005 |
Galarneau A, Min KL, Mangos MM, Damha MJ. Assay for evaluating ribonuclease H-mediated degradation of RNA-antisense oligonucleotide duplexes. Methods in Molecular Biology (Clifton, N.J.). 288: 65-80. PMID 15333898 |
0.84 |
|
| 2004 |
Hannoush RN, Min KL, Damha MJ. Diversity-oriented solid-phase synthesis and biological evaluation of oligonucleotide hairpins as HIV-1 RT RNase H inhibitors. Nucleic Acids Research. 32: 6164-75. PMID 15570067 DOI: 10.1093/nar/gkh948 |
0.44 |
|
| 2004 |
Hannoush RN, Carriero S, Min KL, Damha MJ. Selective inhibition of HIV-1 reverse transcriptase (HIV-1 RT) RNase H by small RNA hairpins and dumbbells. Chembiochem : a European Journal of Chemical Biology. 5: 527-33. PMID 15185377 DOI: 10.1002/cbic.200300831 |
1 |
|
| 2004 |
Lamontagne B, Hannoush RN, Damha MJ, Abou Elela S. Molecular requirements for duplex recognition and cleavage by eukaryotic RNase III: discovery of an RNA-dependent DNA cleavage activity of yeast Rnt1p. Journal of Molecular Biology. 338: 401-18. PMID 15066440 DOI: 10.1016/j.jmb.2004.02.059 |
0.44 |
|
| 2003 |
Carriero S, Damha MJ. Inhibition of pre-mRNA splicing by synthetic branched nucleic acids. Nucleic Acids Research. 31: 6157-67. PMID 14576302 |
1 |
|
| 2003 |
Carriero S, Damha MJ. Template-mediated synthesis of lariat RNA and DNA. The Journal of Organic Chemistry. 68: 8328-38. PMID 14575454 DOI: 10.1021/jo035002r |
1 |
|
| 2003 |
Hannoush RN, Denisov AY, Gehring K, Damha MJ. Structure of 2',5'-linked tetraribonucleotide loops: a novel RNA motif. Nucleosides, Nucleotides & Nucleic Acids. 22: 1687-90. PMID 14565496 DOI: 10.1002/chin.200409214 |
0.44 |
|
| 2003 |
Carriero S, Mangos MM, Agha KA, Noronha AM, Damha MJ. Branchpoint sugar stereochemistry determines the hydrolytic susceptibility of branched RNA fragments by the yeast debranching enzyme (YDBR). Nucleosides, Nucleotides & Nucleic Acids. 22: 1599-602. PMID 14565475 DOI: 10.1081/NCN-120023043 |
1 |
|
| 2003 |
Viazovkina E, Min KL, Galarneau A, Damha MJ. Synthesis and properties of oligonucleotide chimeras containing 5'-amino-2'-deoxy-2'-fluoroarabinonucleosides. Nucleosides, Nucleotides & Nucleic Acids. 22: 1335-8. PMID 14565412 |
0.44 |
|
| 2003 |
Viazovkina E, Mangos MM, Damha MJ. Synthesis and physicochemical properties of 2'-deoxy-2',2''-difluoro-beta-D-ribofuranosyl and 2'-deoxy-2',2''-difluoro-alpha-D-ribofuranosyl oligonucleotides. Nucleosides, Nucleotides & Nucleic Acids. 22: 1251-4. PMID 14565392 DOI: 10.1081/NCN-120022848 |
0.84 |
|
| 2003 |
Agha KA, Damha MJ. Synthesis and binding properties of a homopyrimidine 2',5'-linked xylose nucleic acid (2',5'-XNA). Nucleosides, Nucleotides & Nucleic Acids. 22: 1175-8. PMID 14565373 DOI: 10.1081/NCN-120022829 |
1 |
|
| 2003 |
Denisov AY, Hannoush RN, Gehring K, Damha MJ. A novel RNA motif based on the structure of unusually stable 2',5'-linked r(UUCG) loops. Journal of the American Chemical Society. 125: 11525-31. PMID 13129354 DOI: 10.1021/ja036207k |
0.44 |
|
| 2003 |
Carriero S, Damha MJ. Synthesis of lariat-DNA via the chemical ligation of a dumbbell complex. Organic Letters. 5: 273-6. PMID 12556170 DOI: 10.1021/ol027227e |
1 |
|
| 2003 |
Mangos MM, Min KL, Viazovkina E, Galarneau A, Elzagheid MI, Parniak MA, Damha MJ. Efficient RNase H-directed cleavage of RNA promoted by antisense DNA or 2'F-ANA constructs containing acyclic nucleotide inserts. Journal of the American Chemical Society. 125: 654-61. PMID 12526664 DOI: 10.1021/ja025557o |
0.84 |
|
| 2002 |
Viazovkina E, Mangos MM, Elzagheid MI, Damha MJ. Solid-phase synthesis of 2'-deoxy-2'-fluoro- beta-D-oligoarabinonucleotides (2'F-ANA) and their phosphorothioate derivatives. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 4.15. PMID 18428897 DOI: 10.1002/0471142700.nc0415s10 |
0.84 |
|
| 2002 |
Carriero S, Damha MJ. Solid-phase synthesis of branched oligonucleotides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 4.14. PMID 18428896 DOI: 10.1002/0471142700.nc0414s09 |
1 |
|
| 2002 |
Lacombe J, Viazovkina E, Bernatchez PN, Galarneau A, Damha MJ, Sirois MG. Antisense inhibition of Flk-1 by oligonucleotides composed of 2'-deoxy-2'-fluoro-beta-D-arabino- and 2'-deoxy-nucleosides. Canadian Journal of Physiology and Pharmacology. 80: 951-61. PMID 12450061 DOI: 10.1139/y02-123 |
0.32 |
|
| 2002 |
Min KL, Viazovkina E, Galarneau A, Parniak MA, Damha MJ. Oligonucleotides comprised of alternating 2'-deoxy-2'-fluoro-beta-D-arabinonucleosides and D-2'-deoxyribonucleosides (2'F-ANA/DNA 'altimers') induce efficient RNA cleavage mediated by RNase H. Bioorganic & Medicinal Chemistry Letters. 12: 2651-4. PMID 12182880 |
0.64 |
|
| 2002 |
Mangos MM, Damha MJ. Flexible and frozen sugar-modified nucleic acids--modulation of biological activity through furanose ring dynamics in the antisense strand. Current Topics in Medicinal Chemistry. 2: 1147-71. PMID 12173972 |
0.84 |
|
| 2002 |
Yazbeck DR, Min KL, Damha MJ. Molecular requirements for degradation of a modified sense RNA strand by Escherichia coli ribonuclease H1. Nucleic Acids Research. 30: 3015-25. PMID 12136083 |
0.44 |
|
| 2002 |
Lok CN, Viazovkina E, Min KL, Nagy E, Wilds CJ, Damha MJ, Parniak MA. Potent gene-specific inhibitory properties of mixed-backbone antisense oligonucleotides comprised of 2'-deoxy-2'-fluoro-D-arabinose and 2'-deoxyribose nucleotides. Biochemistry. 41: 3457-67. PMID 11876654 |
1 |
|
| 2001 |
Denisov AY, Noronha AM, Wilds CJ, Trempe JF, Pon RT, Gehring K, Damha MJ. Solution structure of an arabinonucleic acid (ANA)/RNA duplex in a chimeric hairpin: comparison with 2'-fluoro-ANA/RNA and DNA/RNA hybrids. Nucleic Acids Research. 29: 4284-93. PMID 11691916 |
1 |
|
| 2001 |
Ooi SL, Dann C, Nam K, Leahy DJ, Damha MJ, Boeke JD. RNA lariat debranching enzyme. Methods in Enzymology. 342: 233-48. PMID 11586896 DOI: 10.1016/S0076-6879(01)42548-1 |
0.32 |
|
| 2001 |
Carriero S, Braich RS, Hudson RH, Anglin D, Friesen JD, Damha MJ. Inhibition of in vitro pre-mRNA splicing in S. cerevisiae by branched oligonucleotides. Nucleosides, Nucleotides & Nucleic Acids. 20: 873-7. PMID 11563135 DOI: 10.1081/NCN-100002449 |
1 |
|
| 2001 |
Damha MJ, Noronha AM, Wilds CJ, Trempe JF, Denisov A, Pon RT, Gehring K. Properties of arabinonucleic acids (ANA & 20'F-ANA): implications for the design of antisense therapeutics that invoke RNase H cleavage of RNA. Nucleosides, Nucleotides & Nucleic Acids. 20: 429-40. PMID 11563058 DOI: 10.1081/NCN-100002317 |
1 |
|
| 2001 |
Noronha AM, Arion D, Parniak MA, Damha MJ. Effect of substituting arabinonucleosides for deoxynucleotides in the DNA priming strand on the polymerase action of HIV-1 RT. Nucleosides, Nucleotides & Nucleic Acids. 20: 1205-9. PMID 11562987 DOI: 10.1081/NCN-100002520 |
0.84 |
|
| 2001 |
Trempe JF, Wilds CJ, Denisov AY, Pon RT, Damha MJ, Gehring K. NMR solution structure of an oligonucleotide hairpin with a 2'F-ANA/RNA stem: implications for RNase H specificity toward DNA/RNA hybrid duplexes. Journal of the American Chemical Society. 123: 4896-903. PMID 11457316 |
1 |
|
| 2000 |
Wilds CJ, Damha MJ. 2'-Deoxy-2'-fluoro-beta-D-arabinonucleosides and oligonucleotides (2'F-ANA): synthesis and physicochemical studies. Nucleic Acids Research. 28: 3625-35. PMID 10982885 |
1 |
|
| 2000 |
Noronha AM, Wilds CJ, Lok CN, Viazovkina K, Arion D, Parniak MA, Damha MJ. Synthesis and biophysical properties of arabinonucleic acids (ANA): circular dichroic spectra, melting temperatures, and ribonuclease H susceptibility of ANA.RNA hybrid duplexes. Biochemistry. 39: 7050-62. PMID 10852702 |
1 |
|
| 1999 |
Wilds CJ, Damha MJ. Duplex recognition by oligonucleotides containing 2'-deoxy-2'-fluoro-D-arabinose and 2'-deoxy-2'-fluoro-D-ribose. Intermolecular 2'-OH-phosphate contacts versus sugar puckering in the stabilization of triple-helical complexes. Bioconjugate Chemistry. 10: 299-305. PMID 10077480 DOI: 10.1021/bc9801171 |
1 |
|
| 1998 |
Wasner M, Arion D, Borkow G, Noronha A, Uddin AH, Parniak MA, Damha MJ. Physicochemical and biochemical properties of 2',5'-linked RNA and 2',5'-RNA:3',5'-RNA "hybrid" duplexes. Biochemistry. 37: 7478-86. PMID 9585561 DOI: 10.1021/bi980160b |
0.32 |
|
| 1997 |
Borkow G, Arion D, Noronha A, Scartozzi M, Damha MJ, Parniak MA. Inhibitory potency of R-region specific antisense oligonucleotides against in vitro DNA polymerization and template-switching reactions catalysed by HIV-1 reverse transcriptase. The International Journal of Biochemistry & Cell Biology. 29: 1285-95. PMID 9451826 |
0.64 |
|
| 1997 |
Uddin AH, Piunno PA, Hudson RH, Damha MJ, Krull UJ. A fiber optic biosensor for fluorimetric detection of triple-helical DNA. Nucleic Acids Research. 25: 4139-46. PMID 9321670 DOI: 10.1093/nar/25.20.4139 |
0.32 |
|
| 1996 |
Macdonald PM, Damha MJ, Ganeshan K, Braich R, Zabarylo SV. Phosphorus 31 solid state NMR characterization of oligonucleotides covalently bound to a solid support Nucleic Acids Research. 24: 2868-2876. PMID 8760867 DOI: 10.1093/nar/24.15.2868 |
0.32 |
|
| 1995 |
Piunno PAE, Krull UJ, Hudson RHE, Damha MJ, Cohen H. Fiber-optic DNA sensor for fluorometric nucleic acid determination Analytical Chemistry. 67: 2635-2643. PMID 8849028 DOI: 10.1021/ac00111a022 |
0.32 |
|
| 1995 |
Damha MJ, Meng B, Wang D, Yannopoulos CG, Just G. Structural basis for the RNA binding selectivity of oligonucleotide analogues containing alkylsulfide internucleoside linkages and 2'-substituted 3'-deoxyribonucleosides. Nucleic Acids Research. 23: 3967-73. PMID 7479044 |
0.32 |
|
| 1995 |
Wang D, Meng B, Damha MJ, Just G. Synthesis of 2’-Substituted Sulfide-Linked Dinucleotides Nucleosides and Nucleotides. 14: 1961-1984. DOI: 10.1080/15257779508010717 |
0.32 |
|
| 1995 |
Hudson RHE, Uddin AH, Damha MJ. Association of branched nucleic acids: Structural and physicochemical analysis of antiparallel T·AT triple-helical DNA Journal of the American Chemical Society. 117: 12470-12477. DOI: 10.1021/ja00155a011 |
0.32 |
|
| 1994 |
Piunno PAE, Krull UJ, Hudson RHE, Damha MJ, Cohen H. Fiber optic biosensor for fluorimetric detection of DNA hybridization Analytica Chimica Acta. 288: 205-214. DOI: 10.1016/0003-2670(93)E0611-A |
0.32 |
|
| 1993 |
Kawai SH, Wang D, Giannaris PA, Damha MJ, Just G. Solid-phase synthesis and hybridization properties of DNA containing sulfide-linked dinucleosides. Nucleic Acids Research. 21: 1473-9. PMID 8464740 |
0.32 |
|
| 1993 |
Damha MJ, Ogilvie KK. Oligoribonucleotide synthesis. The silyl-phosphoramidite method. Methods in Molecular Biology (Clifton, N.J.). 20: 81-114. PMID 8242149 DOI: 10.1385/0-89603-281-7:81 |
1 |
|
| 1993 |
Idziak I, Just G, Damha MJ, Giannaris PA. Synthesis and hybridization properties of amide-linked thymidine dimers incorporated into oligodeoxynucleotides Tetrahedron Letters. 34: 5417-5420. DOI: 10.1016/S0040-4039(00)73923-2 |
0.32 |
|
| 1991 |
Damha MJ, Giannaris PA, Marfey P, Reid LS. Oligodeoxynucleotides containing unnatural L-2′-deoxyribose Tetrahedron Letters. 32: 2573-2576. DOI: 10.1016/S0040-4039(00)78788-0 |
0.32 |
|
| 1988 |
Damha MJ, Ogilvie KK. Conformational properties of branched RNA fragments in aqueous solution. Biochemistry. 27: 6403-16. PMID 2464368 DOI: 10.1021/bi00417a032 |
1 |
|
| 1986 |
Pon RT, Usman N, Damha MJ, Ogilvie KK. Prevention of guanine modification and chain cleavage during the solid phase synthesis of oligonucleotides using phosphoramidite derivatives. Nucleic Acids Research. 14: 6453-70. PMID 3748816 DOI: 10.1093/nar/14.16.6453 |
1 |
|
| 1985 |
Pon RT, Damha MJ, Ogilvie KK. Modification of guanine bases by nucleoside phosphoramidite reagents during the solid phase synthesis of oligonucleotides. Nucleic Acids Research. 13: 6447-65. PMID 4059050 DOI: 10.1093/nar/13.18.6447 |
1 |
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