| Year |
Citation |
Score |
| 2018 |
Coetzee AW, Beddor PS, Shedden K, Styler W, Wissing D. Plosive voicing in Afrikaans: Differential cue weighting and tonogenesis Journal of Phonetics. 66: 185-216. DOI: 10.1016/J.Wocn.2017.09.009 |
0.649 |
|
| 2015 |
Yin H, Tan Z, Wu J, Zhu J, Shedden KA, Marrero J, Lubman DM. Mass Selected Site-specific Core-fucosylation of Serum Proteins in Hepatocellular Carcinoma. Journal of Proteome Research. PMID 26403951 DOI: 10.1021/Acs.Jproteome.5B00718 |
0.418 |
|
| 2015 |
Byrd AL, Wright AG, Sen S, Shedden K, Manuck SB. Reply to: the liptak-stouffer test for meta-analyses. Biological Psychiatry. 77: e3-4. PMID 24655597 DOI: 10.1016/J.Biopsych.2014.02.009 |
0.32 |
|
| 2014 |
Nie S, Lo A, Wu J, Zhu J, Tan Z, Simeone DM, Anderson MA, Shedden KA, Ruffin MT, Lubman DM. Glycoprotein biomarker panel for pancreatic cancer discovered by quantitative proteomics analysis. Journal of Proteome Research. 13: 1873-84. PMID 24571389 DOI: 10.1021/Pr400967X |
0.474 |
|
| 2013 |
Ouillette P, Saiya-Cork K, Seymour E, Li C, Shedden K, Malek SN. Clonal evolution, genomic drivers, and effects of therapy in chronic lymphocytic leukemia. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 19: 2893-904. PMID 23620403 DOI: 10.1158/1078-0432.Ccr-13-0138 |
0.305 |
|
| 2013 |
Parkin B, Ouillette P, Li Y, Keller J, Lam C, Roulston D, Li C, Shedden K, Malek SN. Clonal evolution and devolution after chemotherapy in adult acute myelogenous leukemia. Blood. 121: 369-77. PMID 23175688 DOI: 10.1182/Blood-2012-04-427039 |
0.318 |
|
| 2013 |
Malek S, Saiya-Cork K, Shedden K, Ouillette P, Yildiz M. The Landscape Of Gene Mutations In Chronic Lymphocytic Leukemia With Elevated Genomic Complexity Blood. 122: 4133-4133. DOI: 10.1182/Blood.V122.21.4133.4133 |
0.316 |
|
| 2013 |
Parkin B, Ouillette P, Yildiz M, Saiya-Cork K, Shedden K, Malek S. Genomic Complexity Versus Gene Mutations In Predicting Overall Survival In Adult Acute Myelogenous Leukemia Blood. 122: 1324-1324. DOI: 10.1182/Blood.V122.21.1324.1324 |
0.309 |
|
| 2012 |
Fong F, Bar HY, Shedden K, saiya-Cork K, Ouillette P, Campagne F, Melnick A, Malek S, Shaknovich R. Epigenetic Profiling of Primary CLL Reveals Novel DNA Methylation-Based Clusters and Novel Mechanisms of Leukemogenesis Blood. 120: 3877-3877. DOI: 10.1182/Blood.V120.21.3877.3877 |
0.32 |
|
| 2012 |
Malek S, Saiya-Cork K, Seymour E, Li C, Shedden K, Ouillette P. Clonal Evolution in Chronic Lymphocytic Leukemia Blood. 120: 3870-3870. DOI: 10.1182/Blood.V120.21.3870.3870 |
0.302 |
|
| 2012 |
Malek S, Li Y, Li H, Ouillette P, Jones S, Fox H, Jacobi K, saiya-Cork K, Bixby D, Lebovic D, Shedden K, Sabel M, Marentette L, Cimmino V, Chang A, et al. Analysis of the Coding Genome of Follicular Lymphoma Identifies Multiple Novel Recurrently Mutated Genes Blood. 120: 147-147. DOI: 10.1182/Blood.V120.21.147.147 |
0.312 |
|
| 2011 |
Vuong H, Shedden K, Liu Y, Lubman DM. Outlier-Based Differential Expression Analysis in Proteomics Studies. Journal of Proteomics & Bioinformatics. 4: 116-122. PMID 21949600 DOI: 10.4172/Jpb.1000177 |
0.742 |
|
| 2011 |
Cai XW, Shedden KA, Yuan SH, Davis MA, Xu LY, Xie CY, Fu XL, Lawrence TS, Lubman DM, Kong FM. Baseline plasma proteomic analysis to identify biomarkers that predict radiation-induced lung toxicity in patients receiving radiation for non-small cell lung cancer. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. 6: 1073-8. PMID 21532507 DOI: 10.1097/Jto.0B013E3182152Ba6 |
0.486 |
|
| 2011 |
Yang N, Feng S, Shedden K, Xie X, Liu Y, Rosser CJ, Lubman DM, Goodison S. Urinary glycoprotein biomarker discovery for bladder cancer detection using LC/MS-MS and label-free quantification. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 17: 3349-59. PMID 21459797 DOI: 10.1158/1078-0432.Ccr-10-3121 |
0.538 |
|
| 2011 |
Lin Z, Simeone DM, Anderson MA, Brand RE, Xie X, Shedden KA, Ruffin MT, Lubman DM. Mass spectrometric assay for analysis of haptoglobin fucosylation in pancreatic cancer. Journal of Proteome Research. 10: 2602-11. PMID 21417406 DOI: 10.1021/Pr200102H |
0.465 |
|
| 2011 |
Saiya-Cork K, Collins R, Parkin B, Ouillette P, Kuizon E, Kujawski L, Erba H, Campagnaro E, Shedden K, Kaminski M, Malek SN. A pathobiological role of the insulin receptor in chronic lymphocytic leukemia. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 17: 2679-92. PMID 21307146 DOI: 10.1158/1078-0432.CCR-10-2058 |
0.31 |
|
| 2010 |
Cai XW, Shedden K, Ao X, Davis M, Fu XL, Lawrence TS, Lubman DM, Kong FM. Plasma proteomic analysis may identify new markers for radiation-induced lung toxicity in patients with non-small-cell lung cancer. International Journal of Radiation Oncology, Biology, Physics. 77: 867-76. PMID 20510197 DOI: 10.1016/J.Ijrobp.2010.01.038 |
0.536 |
|
| 2010 |
Parkin B, Ouillette P, Wang Y, Liu Y, Wright W, Roulston D, Purkayastha A, Dressel A, Karp J, Bockenstedt P, Al-Zoubi A, Talpaz M, Kujawski L, Liu Y, Shedden K, et al. NF1 inactivation in adult acute myelogenous leukemia. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 16: 4135-47. PMID 20505189 DOI: 10.1158/1078-0432.Ccr-09-2639 |
0.305 |
|
| 2010 |
Dai L, Li C, Shedden KA, Lee CJ, Li C, Quoc H, Simeone DM, Lubman DM. Quantitative proteomic profiling studies of pancreatic cancer stem cells. Journal of Proteome Research. 9: 3394-402. PMID 20486718 DOI: 10.1021/Pr100231M |
0.481 |
|
| 2010 |
Ouillette P, Fossum S, Parkin B, Ding L, Bockenstedt P, Al-Zoubi A, Shedden K, Malek SN. Aggressive chronic lymphocytic leukemia with elevated genomic complexity is associated with multiple gene defects in the response to DNA double-strand breaks. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 16: 835-47. PMID 20086003 DOI: 10.1158/1078-0432.Ccr-09-2534 |
0.306 |
|
| 2009 |
Cai X, Shedden K, Ao X, Lawrence TS, Lubman DM, Kong F. Comparative proteomic analysis of radiation induced changes in non small cell lung cancer patients with or without radiation induced lung toxicity. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 27: e22146. PMID 27963529 DOI: 10.1200/Jco.2009.27.15_Suppl.E22146 |
0.496 |
|
| 2009 |
Shedden K, Yang Y, Rosania G. Gene expression associations with the growth inhibitory effects of small molecules on live cells: specificity of effects and uniformity of mechanisms. Statistical Analysis and Data Mining. 2: 175-185. PMID 20657799 DOI: 10.1002/Sam.10049 |
0.309 |
|
| 2009 |
Sun YV, Shedden KA, Zhu J, Choi NH, Kardia SL. Identification of correlated genetic variants jointly associated with rheumatoid arthritis using ridge regression. Bmc Proceedings. 3: S67. PMID 20018061 |
0.495 |
|
| 2009 |
Luo W, Friedman MS, Shedden K, Hankenson KD, Woolf PJ. GAGE: generally applicable gene set enrichment for pathway analysis. Bmc Bioinformatics. 10: 161. PMID 19473525 DOI: 10.1186/1471-2105-10-161 |
0.34 |
|
| 2009 |
Dai L, Li C, Shedden KA, Misek DE, Lubman DM. Comparative proteomic study of two closely related ovarian endometrioid adenocarcinoma cell lines using cIEF fractionation and pathway analysis. Electrophoresis. 30: 1119-31. PMID 19288585 DOI: 10.1002/Elps.200800505 |
0.479 |
|
| 2009 |
Shedden K, Li Q, Liu F, Chang YT, Rosania GR. Machine vision-assisted analysis of structure-localization relationships in a combinatorial library of prospective bioimaging probes. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 75: 482-93. PMID 19243023 DOI: 10.1002/Cyto.A.20713 |
0.53 |
|
| 2009 |
Wang Y, Wu R, Cho KR, Thomas DG, Gossner G, Liu JR, Giordano TJ, Shedden KA, Misek DE, Lubman DM. Differential protein mapping of ovarian serous adenocarcinomas: identification of potential markers for distinct tumor stage. Journal of Proteome Research. 8: 1452-63. PMID 19159301 DOI: 10.1021/Pr800820Z |
0.453 |
|
| 2009 |
Li C, Simeone DM, Brenner DE, Anderson MA, Shedden KA, Ruffin MT, Lubman DM. Pancreatic cancer serum detection using a lectin/glyco-antibody array method. Journal of Proteome Research. 8: 483-92. PMID 19072160 DOI: 10.1021/Pr8007013 |
0.478 |
|
| 2009 |
Malek S, Ouillette P, Wang Y, Liu Y, Wright W, Roulston D, Dressel AL, Karp J, Bockenstedt P, Al-Zoubi A, Talpaz M, Kujawski L, Liu Y, Shedden K, Shakhan S, et al. Genome-Wide Analysis of Microdeletions and Identification of NF1 Inactivation in Acute Myelogenous Leukemia. Blood. 114: 165-165. DOI: 10.1182/Blood.V114.22.165.165 |
0.321 |
|
| 2009 |
Cai X, Shedden K, Li C, Ao X, Lawrence T, Davis M, Lubman D, Kong F. Plasma Proteomic Analysis of Radiation-induced Changes May Help to Identify Patients at Risk for Radiation-induced Lung Toxicity In Non-small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 75: S173-S174. DOI: 10.1016/J.Ijrobp.2009.07.405 |
0.437 |
|
| 2008 |
Kim H, Wu R, Cho KR, Thomas DG, Gossner G, Liu JR, Giordano TJ, Shedden KA, Misek DE, Lubman DM. Comparative proteomic analysis of low stage and high stage endometrioid ovarian adenocarcinomas. Proteomics. Clinical Applications. 2: 571-584. PMID 20523764 DOI: 10.1002/Prca.200780004 |
0.468 |
|
| 2008 |
Shedden K, Taylor JM, Enkemann SA, Tsao MS, Yeatman TJ, Gerald WL, Eschrich S, Jurisica I, Giordano TJ, Misek DE, Chang AC, Zhu CQ, Strumpf D, Hanash S, et al. Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study. Nature Medicine. 14: 822-7. PMID 18641660 DOI: 10.1038/Nm.1790 |
0.324 |
|
| 2008 |
Lee AC, Shedden K, Rosania GR, Crippen GM. Data mining the NCI60 to predict generalized cytotoxicity. Journal of Chemical Information and Modeling. 48: 1379-88. PMID 18588283 DOI: 10.1021/Ci800097K |
0.306 |
|
| 2008 |
Qiu Y, Patwa TH, Xu L, Shedden K, Misek DE, Tuck M, Jin G, Ruffin MT, Turgeon DK, Synal S, Bresalier R, Marcon N, Brenner DE, Lubman DM. Plasma glycoprotein profiling for colorectal cancer biomarker identification by lectin glycoarray and lectin blot. Journal of Proteome Research. 7: 1693-703. PMID 18311904 DOI: 10.1021/Pr700706S |
0.537 |
|
| 2008 |
Saddler C, Ouillette P, Kujawski L, Shangary S, Talpaz M, Kaminski M, Erba H, Shedden K, Wang S, Malek SN. Comprehensive biomarker and genomic analysis identifies p53 status as the major determinant of response to MDM2 inhibitors in chronic lymphocytic leukemia. Blood. 111: 1584-93. PMID 17971485 DOI: 10.1182/Blood-2007-09-112698 |
0.305 |
|
| 2008 |
Malek S, Fossum S, Shedden K, Ouillette P. Identification of Molecular and Biological Predictors of Genomic Complexity in Chronic Lymphocytic Leukemia. Blood. 112: 2061-2061. DOI: 10.1182/Blood.V112.11.2061.2061 |
0.301 |
|
| 2008 |
Malek S, Ouillette P, Shedden K, Saiya-Cork K. Integrated Genomic Profiling Identifies Preferential Expression of the Insulin Receptor in CLL with Deletion 11q. Blood. 112: 1202-1202. DOI: 10.1182/Blood.V112.11.1202.1202 |
0.329 |
|
| 2007 |
Zhao J, Patwa TH, Qiu W, Shedden K, Hinderer R, Misek DE, Anderson MA, Simeone DM, Lubman DM. Glycoprotein microarrays with multi-lectin detection: unique lectin binding patterns as a tool for classifying normal, chronic pancreatitis and pancreatic cancer sera. Journal of Proteome Research. 6: 1864-74. PMID 17428079 DOI: 10.1021/Pr070062P |
0.534 |
|
| 2007 |
Liu R, Wang X, Chen GY, Dalerba P, Gurney A, Hoey T, Sherlock G, Lewicki J, Shedden K, Clarke MF. The prognostic role of a gene signature from tumorigenic breast-cancer cells. The New England Journal of Medicine. 356: 217-26. PMID 17229949 DOI: 10.1056/Nejmoa063994 |
0.314 |
|
| 2007 |
Zhao J, Chang AC, Li C, Shedden KA, Thomas DG, Misek DE, Manoharan AP, Giordano TJ, Beer DG, Lubman DM. Comparative proteomics analysis of Barrett metaplasia and esophageal adenocarcinoma using two-dimensional liquid mass mapping. Molecular & Cellular Proteomics : McP. 6: 987-99. PMID 16829691 DOI: 10.1074/Mcp.M600175-Mcp200 |
0.48 |
|
| 2006 |
Zhu Y, Wu R, Sangha N, Yoo C, Cho KR, Shedden KA, Katabuchi H, Lubman DM. Classifications of ovarian cancer tissues by proteomic patterns. Proteomics. 6: 5846-56. PMID 17068758 DOI: 10.1002/Pmic.200600165 |
0.497 |
|
| 2006 |
Wang Y, Wu R, Cho KR, Shedden KA, Barder TJ, Lubman DM. Classification of cancer cell lines using an automated two-dimensional liquid mapping method with hierarchical clustering techniques. Molecular & Cellular Proteomics : McP. 5: 43-52. PMID 16141455 DOI: 10.1074/Mcp.T500023-Mcp200 |
0.442 |
|
| 2005 |
Giordano TJ, Kuick R, Thomas DG, Misek DE, Vinco M, Sanders D, Zhu Z, Ciampi R, Roh M, Shedden K, Gauger P, Doherty G, Thompson NW, Hanash S, Koenig RJ, et al. Molecular classification of papillary thyroid carcinoma: distinct BRAF, RAS, and RET/PTC mutation-specific gene expression profiles discovered by DNA microarray analysis. Oncogene. 24: 6646-56. PMID 16007166 DOI: 10.1038/Sj.Onc.1208822 |
0.304 |
|
| 2005 |
Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S. Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data. Bmc Bioinformatics. 6: 26. PMID 15705192 DOI: 10.1186/1471-2105-6-26 |
0.325 |
|
| 2004 |
Shedden K, Rosania GR. Exploratory chemoinformatic analysis of cell type-selective anticancer drug targeting. Molecular Pharmaceutics. 1: 267-80. PMID 15981586 DOI: 10.1021/Mp049953K |
0.326 |
|
| 2003 |
Cooper S, Shedden K. Microarray analysis of gene expression during the cell cycle. Cell & Chromosome. 2: 1. PMID 14577836 DOI: 10.1186/1475-9268-2-1 |
0.315 |
|
| 2003 |
Shedden K, Townsend LB, Drach JC, Rosania GR. A rational approach to personalized anticancer therapy: chemoinformatic analysis reveals mechanistic gene-drug associations. Pharmaceutical Research. 20: 843-7. PMID 12817886 DOI: 10.1023/A:1023893700386 |
0.318 |
|
| 2002 |
Gharib TG, Chen G, Wang H, Huang CC, Prescott MS, Shedden K, Misek DE, Thomas DG, Giordano TJ, Taylor JM, Kardia S, Yee J, Orringer MB, Hanash S, Beer DG. Proteomic analysis of cytokeratin isoforms uncovers association with survival in lung adenocarcinoma. Neoplasia (New York, N.Y.). 4: 440-8. PMID 12192603 DOI: 10.1038/Sj.Neo.7900257 |
0.327 |
|
| 2002 |
Shedden K, Cooper S. Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods. Nucleic Acids Research. 30: 2920-9. PMID 12087178 DOI: 10.1093/Nar/Gkf414 |
0.311 |
|
| 2002 |
Shedden K, Cooper S. Analysis of cell-cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization. Proceedings of the National Academy of Sciences of the United States of America. 99: 4379-84. PMID 11904377 DOI: 10.1073/Pnas.062569899 |
0.319 |
|
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