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Ryan C. Kunz, Ph.D. - Publications

Affiliations: 
2007 Biochemistry The University of Nebraska - Lincoln, Lincoln, NE 
Area:
Microbiology Biology, Molecular Biology, General Biophysics
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11/29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Pearl NM, Wilcoxen J, Im S, Kunz RC, Darty JE, Britt RD, Ragsdale SW, Waskell LA. Protonation of the hydroperoxo intermediate of cytochrome P450 2B4 is slower in the presence of cytochrome P450 reductase than in the presence of cytochrome b5. Biochemistry. PMID 27797496 DOI: 10.1021/Acs.Biochem.6B00996  0.556
2010 Dey M, Li X, Kunz RC, Ragsdale SW. Detection of organometallic and radical intermediates in the catalytic mechanism of methyl-coenzyme M reductase using the natural substrate methyl-coenzyme M and a coenzyme B substrate analogue. Biochemistry. 49: 10902-11. PMID 21090696 DOI: 10.1021/Bi101562M  0.722
2010 Li X, Telser J, Kunz RC, Hoffman BM, Gerfen G, Ragsdale SW. Observation of organometallic and radical intermediates formed during the reaction of methyl-coenzyme M reductase with bromoethanesulfonate. Biochemistry. 49: 6866-76. PMID 20597483 DOI: 10.1021/Bi100650M  0.674
2008 Kunz RC, Dey M, Ragsdale SW. Characterization of the thioether product formed from the thiolytic cleavage of the alkyl-nickel bond in methyl-coenzyme M reductase. Biochemistry. 47: 2661-7. PMID 18220418 DOI: 10.1021/Bi701942W  0.725
2007 Dey M, Kunz RC, Lyons DM, Ragsdale SW. Characterization of alkyl-nickel adducts generated by reaction of methyl-coenzyme m reductase with brominated acids. Biochemistry. 46: 11969-78. PMID 17902704 DOI: 10.1021/Bi700925N  0.733
2007 Dey M, Telser J, Kunz RC, Lees NS, Ragsdale SW, Hoffman BM. Biochemical and spectroscopic studies of the electronic structure and reactivity of a methyl-Ni species formed on methyl-coenzyme M reductase. Journal of the American Chemical Society. 129: 11030-2. PMID 17711283 DOI: 10.1021/Ja074556Z  0.714
2006 Dey M, Kunz RC, Van Heuvelen KM, Craft JL, Horng YC, Tang Q, Bocian DF, George SJ, Brunold TC, Ragsdale SW. Spectroscopic and computational studies of reduction of the metal versus the tetrapyrrole ring of coenzyme F430 from methyl-coenzyme M reductase. Biochemistry. 45: 11915-33. PMID 17002292 DOI: 10.1021/Bi0613269  0.669
2006 Kunz RC, Horng YC, Ragsdale SW. Spectroscopic and kinetic studies of the reaction of bromopropanesulfonate with methyl-coenzyme M reductase. The Journal of Biological Chemistry. 281: 34663-76. PMID 16966321 DOI: 10.1074/Jbc.M606715200  0.718
2005 Choi DW, Antholine WE, Do YS, Semrau JD, Kisting CJ, Kunz RC, Campbell D, Rao V, Hartsel SC, DiSpirito AA. Effect of methanobactin on the activity and electron paramagnetic resonance spectra of the membrane-associated methane monooxygenase in Methylococcus capsulatus Bath. Microbiology (Reading, England). 151: 3417-26. PMID 16207923 DOI: 10.1099/Mic.0.28169-0  0.312
2003 Choi DW, Kunz RC, Boyd ES, Semrau JD, Antholine WE, Han JI, Zahn JA, Boyd JM, de la Mora AM, DiSpirito AA. The membrane-associated methane monooxygenase (pMMO) and pMMO-NADH:quinone oxidoreductase complex from Methylococcus capsulatus Bath. Journal of Bacteriology. 185: 5755-64. PMID 13129946 DOI: 10.1128/Jb.185.19.5755-5764.2003  0.338
2001 Zahn JA, Bergmann DJ, Boyd JM, Kunz RC, DiSpirito AA. Membrane-associated quinoprotein formaldehyde dehydrogenase from Methylococcus capsulatus Bath Journal of Bacteriology. 183: 6832-6840. PMID 11698372 DOI: 10.1128/Jb.183.23.6832-6840.2001  0.34
Low-probability matches (unlikely to be authored by this person)
2009 Kubota K, Anjum R, Yu Y, Kunz RC, Andersen JN, Kraus M, Keilhack H, Nagashima K, Krauss S, Paweletz C, Hendrickson RC, Feldman AS, Wu CL, Rush J, Villén J, et al. Sensitive multiplexed analysis of kinase activities and activity-based kinase identification. Nature Biotechnology. 27: 933-40. PMID 19801977 DOI: 10.1038/Nbt.1566  0.287
2012 Kunz RC, McAllister FE, Rush J, Gygi SP. A high-throughput, multiplexed kinase assay using a benchtop orbitrap mass spectrometer to investigate the effect of kinase inhibitors on kinase signaling pathways. Analytical Chemistry. 84: 6233-9. PMID 22724890 DOI: 10.1021/Ac301116Z  0.282
2013 Everley RA, Kunz RC, McAllister FE, Gygi SP. Increasing throughput in targeted proteomics assays: 54-plex quantitation in a single mass spectrometry run. Analytical Chemistry. 85: 5340-6. PMID 23662842 DOI: 10.1021/Ac400845E  0.274
2017 Presler M, Van Itallie E, Klein AM, Kunz R, Coughlin ML, Peshkin L, Gygi SP, Wühr M, Kirschner MW. Proteomics of phosphorylation and protein dynamics during fertilization and meiotic exit in the Xenopus egg. Proceedings of the National Academy of Sciences of the United States of America. 114: E10838-E10847. PMID 29183978 DOI: 10.1073/Pnas.1709207114  0.268
2009 Niu H, Wan L, Busygina V, Kwon Y, Allen JA, Li X, Kunz RC, Kubota K, Wang B, Sung P, Shokat KM, Gygi SP, Hollingsworth NM. Regulation of meiotic recombination via Mek1-mediated Rad54 phosphorylation. Molecular Cell. 36: 393-404. PMID 19917248 DOI: 10.1016/J.Molcel.2009.09.029  0.267
2015 Erickson BK, Jedrychowski MP, McAlister GC, Everley RA, Kunz R, Gygi SP. Evaluating multiplexed quantitative phosphopeptide analysis on a hybrid quadrupole mass filter/linear ion trap/orbitrap mass spectrometer. Analytical Chemistry. 87: 1241-9. PMID 25521595 DOI: 10.1021/Ac503934F  0.265
2018 Vildhede A, Nguyen C, Erickson BK, Kunz RC, Jones R, Kimoto E, Bourbonais F, Rodrigues AD, Varma MV. Comparison of proteomic quantification approaches for hepatic drug transporters: multiplexed global quantitation correlates with targeted proteomic quantitation. Drug Metabolism and Disposition: the Biological Fate of Chemicals. PMID 29439128 DOI: 10.1124/Dmd.117.079285  0.256
2015 Nakamura T, Kunz RC, Zhang C, Kimura T, Yuan CL, Baccaro B, Namiki Y, Gygi SP, Hotamisligil GS. A critical role for PKR complexes with TRBP in Immunometabolic regulation and eIF2α phosphorylation in obesity. Cell Reports. 11: 295-307. PMID 25843719 DOI: 10.1016/J.Celrep.2015.03.021  0.245
2012 Lo HC, Kunz RC, Chen X, Marullo A, Gygi SP, Hollingsworth NM. Cdc7-Dbf4 is a gene-specific regulator of meiotic transcription in yeast. Molecular and Cellular Biology. 32: 541-57. PMID 22106412 DOI: 10.1128/Mcb.06032-11  0.241
2017 Susman MW, Karuna EP, Kunz RC, Gujral TS, Cantú AV, Choi SS, Jong BY, Okada K, Scales MK, Hum J, Hu LS, Kirschner MW, Nishinakamura R, Yamada S, Laird DJ, et al. Kinesin superfamily protein Kif26b links Wnt5a-Ror signaling to the control of cell and tissue behaviors in vertebrates. Elife. 6. PMID 28885975 DOI: 10.7554/Elife.26509  0.239
2015 Yang L, Calay ES, Fan J, Arduini A, Kunz RC, Gygi SP, Yalcin A, Fu S, Hotamisligil GS. METABOLISM. S-Nitrosylation links obesity-associated inflammation to endoplasmic reticulum dysfunction. Science (New York, N.Y.). 349: 500-6. PMID 26228140 DOI: 10.1126/Science.Aaa0079  0.234
2017 Qian Q, Zhang Z, Orwig A, Chen S, Ding WX, Xu Y, Kunz RC, Lind NRL, Stamler JS, Yang L. S-nitrosoglutathione Reductase Dysfunction Contributes to Obesity-Associated Hepatic Insulin Resistance via Regulating Autophagy. Diabetes. PMID 29074597 DOI: 10.2337/Db17-0223  0.226
2017 Yin S, Lopez-Gonzalez R, Kunz RC, Gangopadhyay J, Borufka C, Gygi SP, Gao FB, Reed R. Evidence that C9ORF72 Dipeptide Repeat Proteins Associate with U2 snRNP to Cause Mis-splicing in ALS/FTD Patients. Cell Reports. 19: 2244-2256. PMID 28614712 DOI: 10.1016/J.Celrep.2017.05.056  0.222
2017 Susman MW, Karuna EP, Kunz RC, Gujral TS, Cantú AV, Choi SS, Jong BY, Okada K, Scales MK, Hum J, Hu LS, Kirschner MW, Nishinakamura R, Yamada S, Laird DJ, et al. Author response: Kinesin superfamily protein Kif26b links Wnt5a-Ror signaling to the control of cell and tissue behaviors in vertebrates Elife. DOI: 10.7554/Elife.26509.034  0.205
2020 Ho H, Konopelski S, Susman M, Kunz R, Tan J, Cohen M, Okada K, Lamb H, Choi S, Karuna E, Scales M, Gygi S, Greenberg M. Mechanisms of Wnt5a‐Ror Signaling in Development and Disease The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.00207  0.2
2016 Kugadas A, Christiansen SH, Sankaranarayanan S, Surana NK, Gauguet S, Kunz R, Fichorova R, Vorup-Jensen T, Gadjeva M. Impact of Microbiota on Resistance to Ocular Pseudomonas aeruginosa-Induced Keratitis. Plos Pathogens. 12: e1005855. PMID 27658245 DOI: 10.1371/Journal.Ppat.1005855  0.19
2021 Konopelski Snavely SE, Susman MW, Kunz RC, Tan J, Srinivasan S, Cohen MD, Okada K, Lamb H, Choi SS, Karuna EP, Scales MK, Gygi SP, Greenberg ME, Ho HH. Proteomic analysis identifies the E3 ubiquitin ligase Pdzrn3 as a regulatory target of Wnt5a-Ror signaling. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34135125 DOI: 10.1073/pnas.2104944118  0.152
2021 Maculins T, Verschueren E, Hinkle T, Choi M, Chang P, Chalouni C, Rao S, Kwon Y, Lim J, Katakam AK, Kunz RC, Erickson BK, Huang T, Tsai TH, Vitek O, et al. Multiplexed proteomics of autophagy-deficient murine macrophages reveals enhanced antimicrobial immunity via the oxidative stress response. Elife. 10. PMID 34085925 DOI: 10.7554/eLife.62320  0.093
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