Arianna Rath, Ph.D. - Publications

Affiliations: 
2004 University of Toronto, Toronto, ON, Canada 
Area:
Biochemistry

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Wang J, Rath A, Deber CM. Functional response of the small multidrug resistance protein EmrE to mutations in transmembrane helix 2. Febs Letters. 588: 3720-5. PMID 25157436 DOI: 10.1016/J.Febslet.2014.08.018  0.415
2013 Rath A, Cunningham F, Deber CM. Acrylamide concentration determines the direction and magnitude of helical membrane protein gel shifts. Proceedings of the National Academy of Sciences of the United States of America. 110: 15668-73. PMID 24019476 DOI: 10.1073/Pnas.1311305110  0.45
2013 Patel PC, Lee HS, Ming AY, Rath A, Deber CM, Yip CM, Rocheleau JV, Gray-Owen SD. Inside-out signaling promotes dynamic changes in the carcinoembryonic antigen-related cellular adhesion molecule 1 (CEACAM1) oligomeric state to control its cell adhesion properties. The Journal of Biological Chemistry. 288: 29654-69. PMID 24005674 DOI: 10.1074/Jbc.M113.504639  0.381
2013 Rath A, Deber CM. Design of transmembrane peptides: coping with sticky situations. Methods in Molecular Biology (Clifton, N.J.). 1063: 197-210. PMID 23975779 DOI: 10.1007/978-1-62703-583-5_11  0.463
2013 Rath A, Deber CM. Correction factors for membrane protein molecular weight readouts on sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Analytical Biochemistry. 434: 67-72. PMID 23201391 DOI: 10.1016/J.Ab.2012.11.007  0.376
2012 Nadeau VG, Rath A, Deber CM. Sequence hydropathy dominates membrane protein response to detergent solubilization. Biochemistry. 51: 6228-37. PMID 22779403 DOI: 10.1021/Bi201853N  0.517
2012 Rath A, Deber CM. Protein structure in membrane domains. Annual Review of Biophysics. 41: 135-55. PMID 22577820 DOI: 10.1146/Annurev-Biophys-050511-102310  0.518
2010 Rath A, Nadeau VG, Poulsen BE, Ng DP, Deber CM. Novel hydrophobic standards for membrane protein molecular weight determinations via sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Biochemistry. 49: 10589-91. PMID 21105732 DOI: 10.1021/Bi101840J  0.421
2010 Nadeau VG, Rath A, Deber CM. Biochemical Definition of ‘harsh’ Vs. ‘mild’ Detergents For Membrane Protein Solubilization Biophysical Journal. 98: 50a-51a. DOI: 10.1016/J.Bpj.2009.12.290  0.532
2009 Stollar EJ, Garcia B, Chong PA, Rath A, Lin H, Forman-Kay JD, Davidson AR. Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p. The Journal of Biological Chemistry. 284: 26918-27. PMID 19590096 DOI: 10.1074/Jbc.M109.028431  0.588
2009 Cunningham F, Rath A, Deber CM. Hydrophobic peptide segments in soluble proteins competent for membrane insertion: role in amyloidogenesis. Advances in Experimental Medicine and Biology. 611: 299-300. PMID 19400201 DOI: 10.1007/978-0-387-73657-0_134  0.386
2009 Rath A, Tulumello DV, Deber CM. Peptide models of membrane protein folding. Biochemistry. 48: 3036-45. PMID 19278229 DOI: 10.1021/Bi900184J  0.53
2009 Poulsen BE, Rath A, Deber CM. The assembly motif of a bacterial small multidrug resistance protein. The Journal of Biological Chemistry. 284: 9870-5. PMID 19224913 DOI: 10.1074/Jbc.M900182200  0.436
2009 Rath A, Glibowicka M, Nadeau VG, Chen G, Deber CM. Detergent binding explains anomalous SDS-PAGE migration of membrane proteins. Proceedings of the National Academy of Sciences of the United States of America. 106: 1760-5. PMID 19181854 DOI: 10.1073/Pnas.0813167106  0.528
2009 Cunningham F, Rath A, Johnson RM, Deber CM. Distinctions between hydrophobic helices in globular proteins and transmembrane segments as factors in protein sorting. The Journal of Biological Chemistry. 284: 5395-402. PMID 19095650 DOI: 10.1074/Jbc.M809017200  0.52
2008 Kim J, Lee CD, Rath A, Davidson AR. Recognition of non-canonical peptides by the yeast Fus1p SH3 domain: elucidation of a common mechanism for diverse SH3 domain specificities. Journal of Molecular Biology. 377: 889-901. PMID 18280496 DOI: 10.1016/J.Jmb.2008.01.063  0.572
2008 Rath A, Deber CM. Surface recognition elements of membrane protein oligomerization. Proteins. 70: 786-93. PMID 17729275 DOI: 10.1002/Prot.21569  0.482
2007 Wehbi H, Rath A, Glibowicka M, Deber CM. Role of the extracellular loop in the folding of a CFTR transmembrane helical hairpin. Biochemistry. 46: 7099-106. PMID 17516627 DOI: 10.1021/Bi602570U  0.515
2007 Haynes J, Garcia B, Stollar EJ, Rath A, Andrews BJ, Davidson AR. The biologically relevant targets and binding affinity requirements for the function of the yeast actin-binding protein 1 Src-homology 3 domain vary with genetic context. Genetics. 176: 193-208. PMID 17409071 DOI: 10.1534/Genetics.106.070300  0.581
2007 Rath A, Deber CM. Membrane protein assembly patterns reflect selection for non-proliferative structures. Febs Letters. 581: 1335-41. PMID 17350624 DOI: 10.1016/J.Febslet.2007.02.050  0.428
2007 Rath A, Johnson RM, Deber CM. Peptides as transmembrane segments: decrypting the determinants for helix-helix interactions in membrane proteins. Biopolymers. 88: 217-32. PMID 17206630 DOI: 10.1002/Bip.20668  0.527
2006 Johnson RM, Rath A, Deber CM. The position of the Gly-xxx-Gly motif in transmembrane segments modulates dimer affinity. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 84: 1006-12. PMID 17215886 DOI: 10.1139/o06-192  0.458
2006 Johnson RM, Rath A, Melnyk RA, Deber CM. Lipid solvation effects contribute to the affinity of Gly-xxx-Gly motif-mediated helix-helix interactions. Biochemistry. 45: 8507-15. PMID 16834324 DOI: 10.1021/Bi060063F  0.499
2006 Go MY, Kim S, Partridge AW, Melnyk RA, Rath A, Deber CM, Mogridge J. Self-association of the transmembrane domain of an anthrax toxin receptor. Journal of Molecular Biology. 360: 145-56. PMID 16756998 DOI: 10.1016/J.Jmb.2006.04.072  0.476
2006 Rath A, Melnyk RA, Deber CM. Evidence for assembly of small multidrug resistance proteins by a "two-faced" transmembrane helix. The Journal of Biological Chemistry. 281: 15546-53. PMID 16574656 DOI: 10.1074/Jbc.M600434200  0.456
2005 Rath A, Davidson AR, Deber CM. The structure of "unstructured" regions in peptides and proteins: role of the polyproline II helix in protein folding and recognition. Biopolymers. 80: 179-85. PMID 15700296 DOI: 10.1002/Bip.20227  0.572
2000 Rath A, Davidson AR. The design of a hyperstable mutant of the Abp1p SH3 domain by sequence alignment analysis. Protein Science : a Publication of the Protein Society. 9: 2457-69. PMID 11206067 DOI: 10.1110/Ps.9.12.2457  0.576
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