Kylie J. Walters - Publications

Affiliations: 
University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Biochemistry

58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ruiz-Rodado V, Lita A, Dowdy T, Celiku O, Saldana AC, Wang H, Yang CZ, Chari R, Li A, Zhang W, Song H, Zhang M, Ahn S, Davis D, Chen X, ... ... Walters KJ, et al. Metabolic plasticity of IDH1 glioma cell lines is responsible for low sensitivity to glutaminase inhibition. Cancer & Metabolism. 8: 23. PMID 33101674 DOI: 10.1186/s40170-020-00229-2  1
2020 Chen X, Dorris Z, Shi D, Huang RK, Khant H, Fox T, de Val N, Williams D, Zhang P, Walters KJ. Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome. Structure (London, England : 1993). PMID 32783951 DOI: 10.1016/j.str.2020.07.011  1
2020 Lu X, Ebelle DL, Matsuo H, Walters KJ. An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure. Structure (London, England : 1993). PMID 32160516 DOI: 10.1016/j.str.2020.02.007  0.4
2020 Buel GR, Chen X, Chari R, O'Neill MJ, Ebelle DL, Jenkins C, Sridharan V, Tarasov SG, Tarasova NI, Andresson T, Walters KJ. Structure of E3 ligase E6AP with a proteasome-binding site provided by substrate receptor hRpn10. Nature Communications. 11: 1291. PMID 32157086 DOI: 10.1038/s41467-020-15073-7  1
2019 Chen X, Ebelle DL, Wright BJ, Sridharan V, Hooper E, Walters KJ. Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome. Journal of Molecular Biology. PMID 30664872 DOI: 10.1016/j.jmb.2019.01.021  1
2018 Calabrese DR, Chen X, Leon EC, Gaikwad SM, Phyo Z, Hewitt WM, Alden S, Hilimire TA, He F, Michalowski AM, Simmons JK, Saunders LB, Zhang S, Connors D, Walters KJ, et al. Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex. Nature Communications. 9: 4229. PMID 30315240 DOI: 10.1038/s41467-018-06315-w  1
2018 Anchoori RK, Jiang R, Peng S, Soong RS, Algethami A, Rudek MA, Anders N, Hung CF, Chen X, Lu X, Kayode O, Dyba M, Walters KJ, Roden RBS. Covalent Rpn13-Binding Inhibitors for the Treatment of Ovarian Cancer. Acs Omega. 3: 11917-11929. PMID 30288466 DOI: 10.1021/acsomega.8b01479  1
2017 Lu X, Nowicka U, Sridharan V, Liu F, Randles L, Hymel D, Dyba M, Tarasov SG, Tarasova NI, Zhao XZ, Hamazaki J, Murata S, Burke TR, Walters KJ. Structure of the Rpn13-Rpn2 complex provides insights for Rpn13 and Uch37 as anticancer targets. Nature Communications. 8: 15540. PMID 28598414 DOI: 10.1038/ncomms15540  0.96
2016 Rao T, Gao R, Takada S, Al Abo M, Chen X, Walters KJ, Pommier Y, Aihara H. Novel TDP2-ubiquitin interactions and their importance for the repair of topoisomerase II-mediated DNA damage. Nucleic Acids Research. PMID 27543075 DOI: 10.1093/nar/gkw719  1
2016 Chen X, Randles L, Shi K, Tarasov SG, Aihara H, Walters KJ. Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure (London, England : 1993). PMID 27396824 DOI: 10.1016/j.str.2016.05.018  1
2016 Chen X, Walters KJ. (1)H, (15)N, (13)C resonance assignments for Saccharomyces cerevisiae Rad23 UBL domain. Biomolecular Nmr Assignments. PMID 27188292 DOI: 10.1007/s12104-016-9686-7  1
2016 Yu C, Yang Y, Wang X, Guan S, Fang L, Liu F, Walters KJ, Kaiser P, Huang L. Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free Quantitation. Molecular & Cellular Proteomics : McP. PMID 27114451 DOI: 10.1074/mcp.M116.058271  0.96
2016 Shi Y, Chen X, Elsasser S, Stocks BB, Tian G, Lee BH, Shi Y, Zhang N, de Poot SA, Tuebing F, Sun S, Vannoy J, Tarasov SG, Engen JR, Finley D, ... Walters KJ, et al. Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science (New York, N.Y.). 351. PMID 26912900 DOI: 10.1126/science.aad9421  0.96
2016 Randles L, Anchoori RK, Roden RB, Walters KJ. Proteasome Ubiquitin Receptor hRpn13 and its Interacting Deubiquitinating Enzyme Uch37 are Required for Proper Cell Cycle Progression. The Journal of Biological Chemistry. PMID 26907685 DOI: 10.1074/jbc.M115.694588  0.36
2015 Nowicka U, Hoffman M, Randles L, Shi X, Khavrutskii L, Stefanisko K, Tarasova NI, Darwin KH, Walters KJ. Mycobacterium tuberculosis copper-regulated protein SocB is an intrinsically disordered protein that folds upon interaction with a synthetic phospholipid bilayer. Proteins. PMID 26650755 DOI: 10.1002/prot.24970  0.96
2015 Finley D, Chen X, Walters KJ. Gates, Channels, and Switches: Elements of the Proteasome Machine. Trends in Biochemical Sciences. PMID 26643069 DOI: 10.1016/j.tibs.2015.10.009  0.96
2015 Lu X, Liu F, Durham SE, Tarasov SG, Walters KJ. A High Affinity hRpn2-Derived Peptide That Displaces Human Rpn13 from Proteasome in 293T Cells. Plos One. 10: e0140518. PMID 26466095 DOI: 10.1371/journal.pone.0140518  0.96
2015 Liu F, Koepp DM, Walters KJ. Artificial targeting of misfolded cytosolic proteins to endoplasmic reticulum as a mechanism for clearance. Scientific Reports. 5: 12088. PMID 26168740 DOI: 10.1038/srep12088  0.96
2015 Chen X, Walters KJ. Structural plasticity allows UCH37 to be primed by RPN13 or locked down by INO80G. Molecular Cell. 57: 767-8. PMID 25747657 DOI: 10.1016/j.molcel.2015.02.025  0.96
2013 Anchoori RK, Karanam B, Peng S, Wang JW, Jiang R, Tanno T, Orlowski RZ, Matsui W, Zhao M, Rudek MA, Hung CF, Chen X, Walters KJ, Roden RB. A bis-benzylidine piperidone targeting proteasome ubiquitin receptor RPN13/ADRM1 as a therapy for cancer. Cancer Cell. 24: 791-805. PMID 24332045 DOI: 10.1016/j.ccr.2013.11.001  1
2013 Ehlinger A, Walters KJ. Structural insights into proteasome activation by the 19S regulatory particle. Biochemistry. 52: 3618-28. PMID 23672618 DOI: 10.1021/bi400417a  0.64
2013 Ehlinger A, Park S, Fahmy A, Lary JW, Cole JL, Finley D, Walters KJ. Conformational dynamics of the Rpt6 ATPase in proteasome assembly and Rpn14 binding. Structure (London, England : 1993). 21: 753-65. PMID 23562395 DOI: 10.1016/j.str.2013.02.021  0.64
2012 Hennig J, de Vries SJ, Hennig KD, Randles L, Walters KJ, Sunnerhagen M, Bonvin AM. MTMDAT-HADDOCK: high-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry. Bmc Structural Biology. 12: 29. PMID 23153250 DOI: 10.1186/1472-6807-12-29  0.64
2012 Randles L, Walters KJ. Ubiquitin and its binding domains. Frontiers in Bioscience (Landmark Edition). 17: 2140-57. PMID 22652769  0.36
2012 Chen X, Walters KJ. Identifying and studying ubiquitin receptors by NMR. Methods in Molecular Biology (Clifton, N.J.). 832: 279-303. PMID 22350893 DOI: 10.1007/978-1-61779-474-2_20  1
2011 Liu F, Walters KJ. Policing Parkin with a UblD. The Embo Journal. 30: 2757-8. PMID 21772326 DOI: 10.1038/emboj.2011.223  0.96
2010 Chen X, Lee BH, Finley D, Walters KJ. Structure of proteasome ubiquitin receptor hRpn13 and its activation by the scaffolding protein hRpn2. Molecular Cell. 38: 404-15. PMID 20471946 DOI: 10.1016/j.molcel.2010.04.019  0.64
2010 Liu F, Walters KJ. Multitasking with ubiquitin through multivalent interactions. Trends in Biochemical Sciences. 35: 352-60. PMID 20181483 DOI: 10.1016/j.tibs.2010.01.002  0.96
2009 Zhou X, Zhang N, Liu L, Walters KJ, Hanna PE, Wagner CR. Probing the catalytic potential of the hamster arylamine N-acetyltransferase 2 catalytic triad by site-directed mutagenesis of the proximal conserved residue, Tyr190. The Febs Journal. 276: 6928-41. PMID 19860825 DOI: 10.1111/j.1742-4658.2009.07389.x  0.64
2009 Dikic I, Wakatsuki S, Walters KJ. Ubiquitin-binding domains - from structures to functions. Nature Reviews. Molecular Cell Biology. 10: 659-71. PMID 19773779 DOI: 10.1038/nrm2767  0.64
2009 Walters KJ, Chen X. Measuring ubiquitin chain linkage: Rap80 uses a molecular ruler mechanism for ubiquitin linkage specificity. The Embo Journal. 28: 2307-8. PMID 19690555 DOI: 10.1038/emboj.2009.221  1
2009 Zhang N, Wang Q, Ehlinger A, Randles L, Lary JW, Kang Y, Haririnia A, Storaska AJ, Cole JL, Fushman D, Walters KJ. Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13. Molecular Cell. 35: 280-90. PMID 19683493 DOI: 10.1016/j.molcel.2009.06.010  0.64
2009 Chen X, Solomon WC, Kang Y, Cerda-Maira F, Darwin KH, Walters KJ. Prokaryotic ubiquitin-like protein pup is intrinsically disordered. Journal of Molecular Biology. 392: 208-17. PMID 19607839 DOI: 10.1016/j.jmb.2009.07.018  1
2009 Zhang N, Walters KJ. Insights into how protein dynamics affects arylamine N-acetyltransferase catalysis. Biochemical and Biophysical Research Communications. 385: 395-401. PMID 19463782 DOI: 10.1016/j.bbrc.2009.05.065  0.64
2008 Walters KJ, Zhang N. Rpn10 protects the proteasome from Dsk2. Molecular Cell. 32: 459-60. PMID 19026775 DOI: 10.1016/j.molcel.2008.10.020  0.64
2008 Schreiner P, Chen X, Husnjak K, Randles L, Zhang N, Elsasser S, Finley D, Dikic I, Walters KJ, Groll M. Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction. Nature. 453: 548-52. PMID 18497827 DOI: 10.1038/nature06924  0.64
2008 Husnjak K, Elsasser S, Zhang N, Chen X, Randles L, Shi Y, Hofmann K, Walters KJ, Finley D, Dikic I. Proteasome subunit Rpn13 is a novel ubiquitin receptor. Nature. 453: 481-8. PMID 18497817 DOI: 10.1038/nature06926  0.64
2008 Kawamura A, Westwood I, Wakefield L, Long H, Zhang N, Walters K, Redfield C, Sim E. Mouse N-acetyltransferase type 2, the homologue of human N-acetyltransferase type 1. Biochemical Pharmacology. 75: 1550-60. PMID 18280460 DOI: 10.1016/j.bcp.2007.12.012  0.64
2008 Goh AM, Walters KJ, Elsasser S, Verma R, Deshaies RJ, Finley D, Howley PM. Components of the ubiquitin-proteasome pathway compete for surfaces on Rad23 family proteins. Bmc Biochemistry. 9: 4. PMID 18234089 DOI: 10.1186/1471-2091-9-4  0.64
2007 Liu L, Von Vett A, Zhang N, Walters KJ, Wagner CR, Hanna PE. Arylamine N-acetyltransferases: characterization of the substrate specificities and molecular interactions of environmental arylamines with human NAT1 and NAT2. Chemical Research in Toxicology. 20: 1300-8. PMID 17672512 DOI: 10.1021/tx7001614  0.64
2007 Kang Y, Chen X, Lary JW, Cole JL, Walters KJ. Defining how ubiquitin receptors hHR23a and S5a bind polyubiquitin. Journal of Molecular Biology. 369: 168-76. PMID 17408689 DOI: 10.1016/j.jmb.2007.03.008  0.64
2007 Wang Q, Deloia MA, Kang Y, Litchke C, Zhang N, Titus MA, Walters KJ. The SH3 domain of a M7 interacts with its C-terminal proline-rich region. Protein Science : a Publication of the Protein Society. 16: 189-96. PMID 17189480 DOI: 10.1110/ps.062496807  0.64
2007 Ma L, Sham YY, Walters KJ, Towle HC. A critical role for the loop region of the basic helix-loop-helix/leucine zipper protein Mlx in DNA binding and glucose-regulated transcription. Nucleic Acids Research. 35: 35-44. PMID 17148476 DOI: 10.1093/nar/gkl987  0.64
2007 Kang Y, Zhang N, Koepp DM, Walters KJ. Ubiquitin receptor proteins hHR23a and hPLIC2 interact. Journal of Molecular Biology. 365: 1093-101. PMID 17098253 DOI: 10.1016/j.jmb.2006.10.056  0.64
2006 Díaz-Martínez LA, Kang Y, Walters KJ, Clarke DJ. Yeast UBL-UBA proteins have partially redundant functions in cell cycle control. Cell Division. 1: 28. PMID 17144915 DOI: 10.1186/1747-1028-1-28  0.72
2006 Zhang N, Liu L, Liu F, Wagner CR, Hanna PE, Walters KJ. NMR-based model reveals the structural determinants of mammalian arylamine N-acetyltransferase substrate specificity. Journal of Molecular Biology. 363: 188-200. PMID 16959263 DOI: 10.1016/j.jmb.2006.08.026  0.64
2006 Liu F, Zhang N, Zhou X, Hanna PE, Wagner CR, Koepp DM, Walters KJ. Arylamine N-acetyltransferase aggregation and constitutive ubiquitylation. Journal of Molecular Biology. 361: 482-92. PMID 16857211 DOI: 10.1016/j.jmb.2006.06.029  0.64
2006 Kang Y, Vossler RA, Diaz-Martinez LA, Winter NS, Clarke DJ, Walters KJ. UBL/UBA ubiquitin receptor proteins bind a common tetraubiquitin chain. Journal of Molecular Biology. 356: 1027-35. PMID 16405905 DOI: 10.1016/j.jmb.2005.12.001  0.64
2005 Walters KJ. Ufd1 exhibits dual ubiquitin binding modes. Structure (London, England : 1993). 13: 943-4. PMID 16004865 DOI: 10.1016/j.str.2005.06.001  0.64
2005 Wang Q, Young P, Walters KJ. Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition. Journal of Molecular Biology. 348: 727-39. PMID 15826667 DOI: 10.1016/j.jmb.2005.03.007  1
2004 Wang Q, Walters KJ. Chemical shift assignments of the (poly)ubiquitin-binding region of the proteasome subunit S5a. Journal of Biomolecular Nmr. 30: 231-2. PMID 15704274 DOI: 10.1023/B:JNMR.0000048944.73308.6c  1
2004 Walters KJ, Goh AM, Wang Q, Wagner G, Howley PM. Ubiquitin family proteins and their relationship to the proteasome: a structural perspective. Biochimica Et Biophysica Acta. 1695: 73-87. PMID 15571810 DOI: 10.1016/j.bbamcr.2004.10.005  1
2003 Wang Q, Goh AM, Howley PM, Walters KJ. Ubiquitin recognition by the DNA repair protein hHR23a. Biochemistry. 42: 13529-35. PMID 14621999 DOI: 10.1021/bi035391j  1
2003 Walters KJ, Lech PJ, Goh AM, Wang Q, Howley PM. DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a. Proceedings of the National Academy of Sciences of the United States of America. 100: 12694-9. PMID 14557549 DOI: 10.1073/pnas.1634989100  1
2002 Walters KJ, Kleijnen MF, Goh AM, Wagner G, Howley PM. Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a. Biochemistry. 41: 1767-77. PMID 11827521  0.6
2001 Walters KJ, Ferentz AE, Hare BJ, Hidalgo P, Jasanoff A, Matsuo H, Wagner G. Characterizing protein-protein complexes and oligomers by nuclear magnetic resonance spectroscopy. Methods in Enzymology. 339: 238-58. PMID 11462814 DOI: 10.1016/S0076-6879(01)39316-3  0.64
1999 Matsuo H, Walters KJ, Teruya K, Tanaka T, Gassner GT, Lippard SJ, Kyogoku Y, Wagner G. Identification by NMR Spectroscopy of Residues at Contact Surfaces in Large, Slowly Exchanging Macromolecular Complexes Journal of the American Chemical Society. 121: 9903-9904. DOI: 10.1021/ja991881g  0.4
1997 Walters KJ, Dayie KT, Reece RJ, Ptashne M, Wagner G. Structure and mobility of the PUT3 dimer. Nature Structural Biology. 4: 744-50. PMID 9303003 DOI: 10.1038/nsb0997-744  0.64
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