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Richard P. Cheng - Publications

Affiliations: 
2002-2008 Chemistry State University of New York, Buffalo, Buffalo, NY, United States 
 2008- Chemistry National Taiwan University, Taipei, Taipei City, Taiwan 
Area:
Biochemistry
Website:
https://www.ch.ntu.edu.tw/english/faculty/?id=rpcheng&lang=en
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Li NZ, Yu CH, Wu JY, Huang SJ, Huang SL, Cheng RP. Diagonal Interactions between Glutamate and Arginine Analogs with Varying Side-Chain Lengths in a β-Hairpin. Molecules (Basel, Switzerland). 28. PMID 37049652 DOI: 10.3390/molecules28072888  0.51
2022 Chang JY, Pan YJ, Huang PY, Sun YT, Yu CH, Ning ZJ, Huang SL, Huang SJ, Cheng RP. The Effects of Charged Amino Acid Side-Chain Length on Diagonal Cross-Strand Interactions between Carboxylate- and Ammonium-Containing Residues in a β-Hairpin. Molecules (Basel, Switzerland). 27. PMID 35807421 DOI: 10.3390/molecules27134172  0.472
2021 Chang JY, Li NZ, Wang WM, Liu CT, Yu CH, Chen YC, Lu D, Lin PH, Huang CH, Kono O, Yang TY, Sun YT, Huang PY, Pan YJ, Chen TH, ... ... Cheng RP, et al. Longer charged amino acids favor β-strand formation in hairpin peptides. Journal of Peptide Science : An Official Publication of the European Peptide Society. e3333. PMID 34114290 DOI: 10.1002/psc.3333  0.561
2021 Huang CH, Wong TW, Yu CH, Chang JY, Huang SJ, Huang SL, Cheng RP. Swapping the Positions in a Cross-Strand Lateral Ion-Pairing Interaction between Ammonium- and Carboxylate-Containing Residues in a β-Hairpin. Molecules (Basel, Switzerland). 26. PMID 33802596 DOI: 10.3390/molecules26051346  0.461
2021 Wang WM, Yu CH, Chang JY, Chen TH, Chen YC, Sun YT, Wang SH, Jao SC, Cheng RP. Insertion of Pro-Hyp-Gly provides 2 kcal mol stability but attenuates the specific assembly of ABC heterotrimeric collagen triple helices. Organic & Biomolecular Chemistry. PMID 33565556 DOI: 10.1039/d0ob02190c  0.351
2019 Wu PY, Chen CY, Li JH, Lin JK, Chen TH, Huang SL, Huang SJ, Cheng RP. Effect of arginine deimination and citrulline side chain length on secondary structure formation. Chembiochem : a European Journal of Chemical Biology. PMID 31071235 DOI: 10.1002/Cbic.201900231  0.634
2016 Chen YT, Chao WC, Kuo HT, Shen JY, Chen IH, Yang HC, Wang JS, Lu JF, Cheng RP, Chou PT. Probing the polarity and water environment at the protein-peptide binding interface using tryptophan analogues. Biochemistry and Biophysics Reports. 7: 113-118. PMID 28955897 DOI: 10.1016/J.Bbrep.2016.05.022  0.513
2016 Liu MC, Chen CY, Chiang CH, Wang WM, Cheng RP. Effect of lysine methylation and acetylation on the RNA recognition and cellular uptake of Tat-derived peptides. Bioorganic & Medicinal Chemistry. PMID 27670097 DOI: 10.1016/J.Bmc.2016.08.015  0.488
2015 Wu CH, Chen YP, Liu SL, Chien FC, Mou CY, Cheng RP. Attenuating HIV Tat/TAR-mediated protein expression by exploring the side chain length of positively charged residues. Organic & Biomolecular Chemistry. PMID 26399751 DOI: 10.1039/C5Ob01729G  0.501
2015 Koubek J, Chen YR, Cheng RP, Huang JJ. Nonorthogonal tRNA(cys)(Amber) for protein and nascent chain labeling. Rna (New York, N.Y.). 21: 1672-82. PMID 26194135 DOI: 10.1261/Rna.051805.115  0.356
2015 Li JH, Chiu WC, Yao YC, Cheng RP. Effect of arginine methylation on the RNA recognition and cellular uptake of Tat-derived peptides. Bioorganic & Medicinal Chemistry. 23: 2281-6. PMID 25800434 DOI: 10.1016/J.Bmc.2015.01.051  0.489
2015 Kuo HT, Liu SL, Chiu WC, Fang CJ, Chang HC, Wang WR, Yang PA, Li JH, Huang SJ, Huang SL, Cheng RP. Effect of charged amino acid side chain length on lateral cross-strand interactions between carboxylate- and guanidinium-containing residues in a β-hairpin. Amino Acids. 47: 885-98. PMID 25646959 DOI: 10.1007/S00726-015-1916-2  0.61
2014 Wu CH, Weng MH, Chang HC, Li JH, Cheng RP. Effect of each guanidinium group on the RNA recognition and cellular uptake of Tat-derived peptides. Bioorganic & Medicinal Chemistry. 22: 3016-20. PMID 24767816 DOI: 10.1016/J.Bmc.2014.03.037  0.503
2014 Kuo HT, Yang PA, Wang WR, Hsu HC, Wu CH, Ting YT, Weng MH, Kuo LH, Cheng RP. Effect of side chain length on intrahelical interactions between carboxylate- and guanidinium-containing amino acids. Amino Acids. 46: 1867-83. PMID 24744084 DOI: 10.1007/S00726-014-1737-8  0.688
2013 Kuo HT, Fang CJ, Tsai HY, Yang MF, Chang HC, Liu SL, Kuo LH, Wang WR, Yang PA, Huang SJ, Huang SL, Cheng RP. Effect of charged amino acid side chain length on lateral cross-strand interactions between carboxylate-containing residues and lysine analogues in a β-hairpin. Biochemistry. 52: 9212-22. PMID 24328126 DOI: 10.1021/Bi400974X  0.569
2013 Wu CH, Chen YP, Wu SH, Hung Y, Mou CY, Cheng RP. Enhanced non-endocytotic uptake of mesoporous silica nanoparticles by shortening the peptide transporter arginine side chain. Acs Applied Materials & Interfaces. 5: 12244-8. PMID 24261815 DOI: 10.1021/Am4039882  0.401
2013 Kuo LH, Li JH, Kuo HT, Hung CY, Tsai HY, Chiu WC, Wu CH, Wang WR, Yang PA, Yao YC, Wong TW, Huang SJ, Huang SL, Cheng RP. Effect of charged amino acid side chain length at non-hydrogen bonded strand positions on β-hairpin stability. Biochemistry. 52: 7785-97. PMID 24156236 DOI: 10.1021/Bi400911P  0.607
2013 Wu CH, Chen YP, Mou CY, Cheng RP. Altering the Tat-derived peptide bioactivity landscape by changing the arginine side chain length. Amino Acids. 44: 473-80. PMID 22821217 DOI: 10.1007/S00726-012-1357-0  0.542
2012 Cheng RP, Wang WR, Girinath P, Yang PA, Ahmad R, Li JH, Hart P, Kokona B, Fairman R, Kilpatrick C, Argiros A. Effect of glutamate side chain length on intrahelical glutamate-lysine ion pairing interactions. Biochemistry. 51: 7157-72. PMID 22931137 DOI: 10.1021/Bi300655Z  0.774
2012 Cheng RP, Weng YJ, Wang WR, Koyack MJ, Suzuki Y, Wu CH, Yang PA, Hsu HC, Kuo HT, Girinath P, Fang CJ. Helix formation and capping energetics of arginine analogs with varying side chain length. Amino Acids. 43: 195-206. PMID 21922267 DOI: 10.1007/S00726-011-1064-2  0.742
2010 Cheng RP, Girinath P, Suzuki Y, Kuo HT, Hsu HC, Wang WR, Yang PA, Gullickson D, Wu CH, Koyack MJ, Chiu HP, Weng YJ, Hart P, Kokona B, Fairman R, et al. Positional effects on helical Ala-based peptides Biochemistry. 49: 9372-9384. PMID 20925317 DOI: 10.1021/Bi101156J  0.714
2010 Cheng RP, Gellman SH, DeGrado WF. ChemInform Abstract: β-Peptides: From Structure to Function Cheminform. 32: no-no. DOI: 10.1002/chin.200152275  0.504
2009 Chiu HP, Kokona B, Fairman R, Cheng RP. Effect of highly fluorinated amino acids on protein stability at a solvent-exposed position on an internal strand of protein G B1 domain. Journal of the American Chemical Society. 131: 13192-3. PMID 19711980 DOI: 10.1021/Ja903631H  0.764
2009 Heimburg-Molinaro J, Almogren A, Morey S, Glinskii OV, Roy R, Wilding GE, Cheng RP, Glinsky VV, Rittenhouse-Olson K. Development, characterization, and immunotherapeutic use of peptide mimics of the Thomsen-Friedenreich carbohydrate antigen. Neoplasia (New York, N.Y.). 11: 780-92. PMID 19649208 DOI: 10.1593/Neo.09504  0.315
2007 Chiu HP, Cheng RP. Chemoenzymatic synthesis of (S)-hexafluoroleucine and (S)-tetrafluoroleucine. Organic Letters. 9: 5517-20. PMID 18044910 DOI: 10.1021/Ol702470J  0.668
2007 Cheng RP, Girinath P, Ahmad R. Effect of lysine side chain length on intra-helical glutamate--lysine ion pairing interactions. Biochemistry. 46: 10528-37. PMID 17718542 DOI: 10.1021/bi700701z  0.788
2006 Chiu HP, Suzuki Y, Gullickson D, Ahmad R, Kokona B, Fairman R, Cheng RP. Helix propensity of highly fluorinated amino acids. Journal of the American Chemical Society. 128: 15556-7. PMID 17147342 DOI: 10.1021/Ja0640445  0.785
2006 Koyack MJ, Cheng RP. Design and synthesis of beta-peptides with biological activity. Methods in Molecular Biology (Clifton, N.J.). 340: 95-109. PMID 16957334 DOI: 10.1385/1-59745-116-9:95  0.797
2004 Cheng RP. Beyond de novo protein design--de novo design of non-natural folded oligomers. Current Opinion in Structural Biology. 14: 512-20. PMID 15313247 DOI: 10.1016/J.Sbi.2004.07.001  0.358
2003 Walsh ST, Cheng RP, Wright WW, Alonso DO, Daggett V, Vanderkooi JM, DeGrado WF. The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR. Protein Science : a Publication of the Protein Society. 12: 520-31. PMID 12592022 DOI: 10.1110/Ps.0223003  0.689
2002 Cheng RP, DeGrado WF. Long-range interactions stabilize the fold of a non-natural oligomer. Journal of the American Chemical Society. 124: 11564-5. PMID 12296699 DOI: 10.1021/Ja020728A  0.614
2001 Cheng RP, Suich DJ, Cheng H, Roder H, DeGrado WF. Template-constrained somatostatin analogues: a biphenyl linker induces a type-V' turn. Journal of the American Chemical Society. 123: 12710-1. PMID 11741449 DOI: 10.1021/Ja0116932  0.416
2001 Cheng RP, Gellman SH, DeGrado WF. beta-Peptides: from structure to function. Chemical Reviews. 101: 3219-32. PMID 11710070 DOI: 10.1021/Cr000045I  0.585
2001 Cheng RP, DeGrado WF. De novo design of a monomeric helical beta-peptide stabilized by electrostatic interactions. Journal of the American Chemical Society. 123: 5162-3. PMID 11457373 DOI: 10.1021/Ja010438E  0.638
2001 Mezo AR, Cheng RP, Imperiali B. Oligomerization of uniquely folded mini-protein motifs: development of a homotrimeric betabetaalpha peptide. Journal of the American Chemical Society. 123: 3885-91. PMID 11457138 DOI: 10.1021/Ja004292F  0.707
2001 Cheng RP, Gellman SH, DeGrado WF. β-peptides: From structure to function Chemical Reviews. 101: 3219-3232. DOI: 10.1021/cr000045i  0.534
1996 Struthers MD, Cheng RP, Imperiali B. Design of a monomeric 23-residue polypeptide with defined tertiary structure. Science (New York, N.Y.). 271: 342-5. PMID 8553067 DOI: 10.1126/Science.271.5247.342  0.585
1996 Cheng RP, Fisher SL, Imperiali B. Metallopeptide design: Tuning the metal cation affinities with unnatural amino acids and peptide secondary structure Journal of the American Chemical Society. 118: 11349-11356. DOI: 10.1021/Ja9619723  0.692
1996 Struthers MD, Cheng RP, Imperiali B. Economy in protein design: Evolution of a metal-independent ββα motif based on the zinc finger domains Journal of the American Chemical Society. 118: 3073-3081. DOI: 10.1021/Ja954014U  0.638
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