Daniel Hoffmann - Publications

Affiliations: 
Bioinformatics, Center of Medical Biotechnology University of Duisburg-Essen, Germany 

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Karimzadeh H, Kiraithe MM, Kosinska AD, Glaser M, Fiedler M, Oberhardt V, Salimi Alizei E, Hofmann M, Mok JY, Nguyen M, van Esch WJE, Budeus B, Grabowski J, Homs M, Olivero A, ... ... Hoffmann D, et al. Amino acid substitutions within HLA-B*27-restricted T cell epitopes prevent recognition by hepatitis delta virus-specific CD8+ T cells. Journal of Virology. PMID 29669837 DOI: 10.1128/Jvi.01891-17  0.321
2016 Kletenkov K, Hoffmann D, Böni J, Yerly S, Aubert V, Schöni-Affolter F, Struck D, Verheyen J, Klimkait T. Role of Gag mutations in PI resistance in the Swiss HIV cohort study: bystanders or contributors? Journal of Antimicrobial Chemotherapy. 72: 866-875. PMID 27999036 DOI: 10.1093/Jac/Dkw493  0.314
2015 Kefalakes H, Budeus B, Walker A, Jochum C, Hilgard G, Heinold A, Heinemann FM, Gerken G, Hoffmann D, Timm J. Adaptation of the hepatitis B virus core protein to CD8(+) T-cell selection pressure. Hepatology (Baltimore, Md.). 62: 47-56. PMID 25720337 DOI: 10.1002/Hep.27771  0.312
2015 Kefalakes H, Budeus B, Walker A, Jochum C, Hilgard G, Heinold A, Heinemann F, Gerken G, Hoffmann D, Timm J. Viral sequence analysis of the hepatitis B virus core protein reveals CD8 T cell epitopes under reproducible selection pressure Zeitschrift Fur Gastroenterologie. 53. DOI: 10.1055/S-0034-1397260  0.309
2014 Heider D, Dybowski JN, Wilms C, Hoffmann D. A simple structure-based model for the prediction of HIV-1 co-receptor tropism. Biodata Mining. 7: 14. PMID 25120583 DOI: 10.1186/1756-0381-7-14  0.301
2012 Ruhl M, Chhatwal P, Strathmann H, Kuntzen T, Bankwitz D, Skibbe K, Walker A, Heinemann FM, Horn PA, Allen TM, Hoffmann D, Pietschmann T, Timm J. Escape from a dominant HLA-B*15-restricted CD8+ T cell response against hepatitis C virus requires compensatory mutations outside the epitope. Journal of Virology. 86: 991-1000. PMID 22072759 DOI: 10.1128/Jvi.05603-11  0.32
2011 Dybowski JN, Riemenschneider M, Hauke S, Pyka M, Verheyen J, Hoffmann D, Heider D. Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers. Biodata Mining. 4: 26. PMID 22082002 DOI: 10.1186/1756-0381-4-26  0.331
2011 Lederer C, Heider D, van den Boom J, Hoffmann D, Mueller JW, Bayer P. Single-domain parvulins constitute a specific marker for recently proposed deep-branching archaeal subgroups. Evolutionary Bioinformatics Online. 7: 135-48. PMID 22065628 DOI: 10.4137/Ebo.S7683  0.305
2011 Ruhl M, Knuschke T, Schewior K, Glavinic L, Neumann-Haefelin C, Chang DI, Klein M, Heinemann FM, Tenckhoff H, Wiese M, Horn PA, Viazov S, Spengler U, Roggendorf M, Scherbaum N, ... ... Hoffmann D, et al. CD8+ T-cell response promotes evolution of hepatitis C virus nonstructural proteins. Gastroenterology. 140: 2064-73. PMID 21376049 DOI: 10.1053/J.Gastro.2011.02.060  0.317
2010 Dybowski JN, Heider D, Hoffmann D. Prediction of co-receptor usage of HIV-1 from genotype. Plos Computational Biology. 6: e1000743. PMID 20419152 DOI: 10.1371/Journal.Pcbi.1000743  0.301
2009 Verheyen J, Knops E, Kupfer B, Hamouda O, Somogyi S, Schuldenzucker U, Hoffmann D, Kaiser R, Pfister H, Kücherer C. Prevalence of C-terminal gag cleavage site mutations in HIV from therapy-naïve patients. Journal of Infection. 58: 61-67. PMID 19110315 DOI: 10.1016/J.Jinf.2008.11.009  0.3
2005 Beerenwinkel N, Däumer M, Sing T, Rahnenfuhrer J, Lengauer T, Selbig J, Hoffmann D, Kaiser R. Estimating HIV evolutionary pathways and the genetic barrier to drug resistance. The Journal of Infectious Diseases. 191: 1953-60. PMID 15871130 DOI: 10.1086/430005  0.3
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