Alyson E. Santoro, Ph.D. - Publications

2008 Stanford University, Palo Alto, CA 
Environmental Sciences, Microbiology Biology, Oceanography Biology, Biogeochemistry

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Bayer B, Saito MA, McIlvin MR, Lücker S, Moran DM, Lankiewicz TS, Dupont CL, Santoro AE. Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions. The Isme Journal. PMID 33230266 DOI: 10.1038/s41396-020-00828-3  0.44
2018 Santoro AE, Richter RA, Dupont CL. Planktonic Marine Archaea. Annual Review of Marine Science. PMID 30212260 DOI: 10.1146/Annurev-Marine-121916-063141  0.44
2018 Carini P, Dupont CL, Santoro AE. Patterns of thaumarchaeal gene expression in culture and diverse marine environments. Environmental Microbiology. PMID 29626379 DOI: 10.1111/1462-2920.14107  0.44
2016 Hurley SJ, Elling FJ, Könneke M, Buchwald C, Wankel SD, Santoro AE, Lipp JS, Hinrichs KU, Pearson A. Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the TEX86 temperature proxy. Proceedings of the National Academy of Sciences of the United States of America. PMID 27357675 DOI: 10.1073/Pnas.1518534113  0.76
2016 Orsi WD, Smith JM, Liu S, Liu Z, Sakamoto CM, Wilken S, Poirier C, Richards TA, Keeling PJ, Worden AZ, Santoro AE. Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean. The Isme Journal. PMID 26953597 DOI: 10.1038/Ismej.2016.20  0.76
2016 Santoro AE. MICROBIOLOGY. The do-it-all nitrifier Science (New York, N.Y.). 351: 342-343. PMID 26798002 DOI: 10.1126/Science.Aad9839  0.76
2016 Santoro AE. The do-it-all nitrifier: The discovery of bacteria that can oxidize both ammonia and nitrite upends a long-held dogma Science. 351: 342-343. DOI: 10.1126/science.aaf1139  0.76
2015 Orsi WD, Smith JM, Wilcox HM, Swalwell JE, Carini P, Worden AZ, Santoro AE. Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter. The Isme Journal. PMID 25615436 DOI: 10.1038/Ismej.2014.260  0.76
2015 Santoro AE, Dupont CL, Richter RA, Craig MT, Carini P, McIlvin MR, Yang Y, Orsi WD, Moran DM, Saito MA. Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": an ammonia-oxidizing archaeon from the open ocean. Proceedings of the National Academy of Sciences of the United States of America. 112: 1173-8. PMID 25587132 DOI: 10.1073/Pnas.1416223112  0.76
2015 Buchwald C, Santoro AE, Stanley RHR, Casciotti KL. Nitrogen cycling in the secondary nitrite maximum of the eastern tropical North Pacific off Costa Rica Global Biogeochemical Cycles. 29: 2061-2081. DOI: 10.1002/2015Gb005187  0.76
2014 Orsi WD, Richards TA, Santoro AE. Cellular maintenance processes that potentially underpin the survival of subseafloor fungi over geological timescales Estuarine, Coastal and Shelf Science. DOI: 10.1016/J.Ecss.2015.04.009  0.76
2013 Santoro AE, Sakamoto CM, Smith JM, Plant JN, Gehman AL, Worden AZ, Johnson KS, Francis CA, Casciotti KL. Measurements of nitrite production in and around the primary nitrite maximum in the central California Current Biogeosciences. 10: 7395-7410. DOI: 10.5194/Bg-10-7395-2013  0.76
2012 Buchwald C, Santoro AE, McIlvin MR, Casciotti KL. Oxygen isotopic composition of nitrate and nitrite produced by nitrifying cocultures and natural marine assemblages Limnology and Oceanography. 57: 1361-1375. DOI: 10.4319/Lo.2012.57.5.1361  0.76
2012 Wong SHC, Santoro AE, Nidzieko NJ, Hench JL, Boehm AB. Coupled physical, chemical, and microbiological measurements suggest a connection between internal waves and surf zone water quality in the Southern California Bight Continental Shelf Research. 34: 64-78. DOI: 10.1016/J.Csr.2011.12.005  0.76
2011 Santoro AE, Buchwald C, McIlvin MR, Casciotti KL. Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea. Science (New York, N.Y.). 333: 1282-5. PMID 21798895 DOI: 10.1126/Science.1208239  0.76
2011 Santoro AE, Casciotti KL. Enrichment and characterization of ammonia-oxidizing archaea from the open ocean: phylogeny, physiology and stable isotope fractionation. The Isme Journal. 5: 1796-808. PMID 21562601 DOI: 10.1038/Ismej.2011.58  0.76
2011 Casciotti KL, Buchwald C, Santoro AE, Frame C. Assessment of nitrogen and oxygen isotopic fractionation during nitrification and its expression in the marine environment. Methods in Enzymology. 486: 253-80. PMID 21185439 DOI: 10.1016/B978-0-12-381294-0.00011-0  0.76
2010 Santoro AE, Casciotti KL, Francis CA. Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environmental Microbiology. 12: 1989-2006. PMID 20345944 DOI: 10.1111/J.1462-2920.2010.02205.X  0.76
2010 Monismith SG, Davis KA, Shellenbarger GG, Hench JL, Nidzieko NJ, Santoro AE, Reidenbach MA, Rosman JH, Holtzman R, Martens CS, Lindquist NL, Southwell MW, Genin A. Flow effects on benthic grazing on phytoplankton by a Caribbean reef Limnology and Oceanography. 55: 1881-1892. DOI: 10.4319/Lo.2010.55.5.1881  0.76
2010 Santoro AE, Nidzieko NJ, Van Dijken GL, Arrigo KR, Boehm AB. Contrasting spring and summer phytoplankton dynamics in the nearshore Southern California Bight Limnology and Oceanography. 55: 264-278. DOI: 10.4319/Lo.2010.55.1.0264  0.76
2010 Santoro AE. Microbial nitrogen cycling at the saltwater-freshwater interface Hydrogeology Journal. 18: 187-202. DOI: 10.1007/S10040-009-0526-Z  0.76
2008 Santoro AE, Francis CA, de Sieyes NR, Boehm AB. Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environmental Microbiology. 10: 1068-79. PMID 18266758 DOI: 10.1111/J.1462-2920.2007.01547.X  0.76
2007 Yamahara KM, Layton BA, Santoro AE, Boehm AB. Beach sands along the California coast are diffuse sources of fecal bacteria to coastal waters. Environmental Science & Technology. 41: 4515-21. PMID 17695890 DOI: 10.1021/Es062822N  0.76
2007 Santoro AE, Boehm AB. Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: relationship to waves, tides and traditional indicators. Environmental Microbiology. 9: 2038-49. PMID 17635548 DOI: 10.1111/J.1462-2920.2007.01319.X  0.76
2006 Santoro AE, Boehm AB, Francis CA. Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer. Applied and Environmental Microbiology. 72: 2102-9. PMID 16517659 DOI: 10.1128/Aem.72.3.2102-2109.2006  0.76
2005 Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proceedings of the National Academy of Sciences of the United States of America. 102: 14683-8. PMID 16186488 DOI: 10.1073/Pnas.0506625102  0.76
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