Donald Eugene Bergstrom - Publications

Affiliations: 
Medicinal Chemistry and Molecular Pharmacology Purdue University, West Lafayette, IN, United States 
Area:
Biochemistry
Website:
https://www.mcmp.purdue.edu/faculty/dbergstr

132 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Giardina SF, Werner DS, Pingle M, Feinberg PB, Foreman KW, Bergstrom DE, Arnold LD, Barany F. Novel, Self-Assembling Dimeric Inhibitors of Human β Tryptase. Journal of Medicinal Chemistry. PMID 32057241 DOI: 10.1021/acs.jmedchem.9b01689  0.48
2018 Giardina SF, Werner DS, Pingle M, Bergstrom DE, Arnold LD, Barany F. A Novel, Nonpeptidic, Orally Active Bivalent Inhibitor of Human β-Tryptase. Pharmacology. 102: 233-243. PMID 30134249 DOI: 10.1159/000492078  0.48
2018 Giardina SF, Werner DS, Pingle M, Foreman KW, Bergstrom DE, Arnold LD, Barany F. Target-Directed Self-Assembly of Homodimeric Drugs Against β-Tryptase. Acs Medicinal Chemistry Letters. 9: 827-831. PMID 30128075 DOI: 10.1021/acsmedchemlett.8b00204  0.48
2015 Wanner J, Romashko D, Werner DS, May EW, Peng Y, Schulz R, Foreman KW, Russo S, Arnold LD, Pingle M, Bergstrom DE, Barany F, Thomson S. Reversible linkage of two distinct small molecule inhibitors of Myc generates a dimeric inhibitor with improved potency that is active in myc over-expressing cancer cell lines. Plos One. 10: e0121793. PMID 25875098 DOI: 10.1371/journal.pone.0121793  0.48
2013 Zohrabi-Kalantari V, Jarrahian A, Bissantz C, Bergstrom DE, Barker EL, Link A. 4-Aminocyclopentane-1,3-diols as platforms for diversity: synthesis of anandamide analogs. Medicinal Chemistry (ShāRiqah (United Arab Emirates)). 9: 881-8. PMID 23157226 DOI: 10.2174/1573406411309060013  1
2013 Dolash BD, Lahiji RR, Zemlyanov DY, Drachev VP, Reifenberger R, Bergstrom DE. Sonication mediated covalent cross-linking of DNA to single-walled carbon nanotubes Chemical Physics. 413: 11-19. DOI: 10.1016/j.chemphys.2012.07.004  1
2012 Guan Y, Bissantz C, Bergstrom DE, Link A. 1,2,4-trisubstituted cyclopentanes as platforms for diversity. Archiv Der Pharmazie. 345: 677-86. PMID 22760821 DOI: 10.1002/ardp.201200101  1
2012 Laing BM, Bergstrom DE. Evaluation of end-capped DNA modules for pRNA capture and functionalization. Bioconjugate Chemistry. 23: 683-7. PMID 22443238 DOI: 10.1021/bc200371t  1
2012 Tong L, Liu Y, Dolash BD, Jung Y, Slipchenko MN, Bergstrom DE, Cheng JX. Label-free imaging of semiconducting and metallic carbon nanotubes in cells and mice using transient absorption microscopy. Nature Nanotechnology. 7: 56-61. PMID 22138864 DOI: 10.1038/nnano.2011.210  1
2011 Reddy B, Elibol OH, Nair PR, Dorvel BR, Butler F, Ahsan Z, Bergstrom DE, Alam MA, Bashir R. Silicon field effect transistors as dual-use sensor-heater hybrids. Analytical Chemistry. 83: 888-95. PMID 21214189 DOI: 10.1021/ac102566f  1
2011 Laing BM, Guo P, Bergstrom DE. Optimized method for the synthesis and purification of adenosine--folic acid conjugates for use as transcription initiators in the preparation of modified RNA. Methods (San Diego, Calif.). 54: 260-6. PMID 21163352 DOI: 10.1016/j.ymeth.2010.12.007  1
2010 Ng PS, Laing BM, Balasundarum G, Pingle M, Friedman A, Bergstrom DE. Synthesis and evaluation of new spacers for use as dsDNA end-caps. Bioconjugate Chemistry. 21: 1545-53. PMID 20715857 DOI: 10.1021/bc100202y  1
2010 Laing BM, Barrow-Laing L, Harrington M, Long EC, Bergstrom DE. Properties of double-stranded oligonucleotides modified with lipophilic substituents. Bioconjugate Chemistry. 21: 1537-44. PMID 20672836 DOI: 10.1021/bc100201n  1
2010 Balogh LP, Mager DE, Khan MK. Synthesis and biodisposition of dendrimer composite nanoparticles Handbook of Materials For Nanomedicine. 255-289. DOI: 10.4032/9789814267588  1
2010 Reddy B, Dorvel BR, Elibol OH, Nair PR, Alam MA, Bergstrom DE, Bashir R. Temperature measurement in fluid directly at the surface with high spatial resolution using a covalently attached fluorescent dye Biennial University/Government/Industry Microelectronics Symposium - Proceedings. DOI: 10.1109/UGIM.2010.5508917  1
2010 Dorvel B, Block I, Reddy B, Mathias P, Clare SE, Cunningham B, Bergstrom DE, Bashir R. Vapor-phase deposition of monofunctional alkoxysilanes for sub-nanometer-level biointerfacing on silicon oxide surfaces Advanced Functional Materials. 20: 87-95. DOI: 10.1002/adfm.200901688  1
2009 Elibol OH, Reddy B, Nair PR, Dorvel B, Butler F, Ahsan ZS, Bergstrom DE, Alam MA, Bashir R. Localized heating on silicon field effect transistors: device fabrication and temperature measurements in fluid. Lab On a Chip. 9: 2789-95. PMID 19967115 DOI: 10.1039/b906048k  1
2009 Bergstrom DE. Unnatural nucleosides with unusual base pairing properties. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.4. PMID 19488968 DOI: 10.1002/0471142700.nc0104s37  1
2008 Fang S, Guan Y, Blatchley ER, Shen C, Bergstrom DE. Conjugation of (E)-5-[2-(Methoxycarbonyl)ethenyl]cytidine to hydrophilic microspheres: development of a mobile microscale UV light actinometer. Bioconjugate Chemistry. 19: 592-7. PMID 18266312 DOI: 10.1021/bc700336x  1
2008 Blatchley ER, Shen C, Scheible OK, Robinson JP, Ragheb K, Bergstrom DE, Rokjer D. Validation of large-scale, monochromatic UV disinfection systems for drinking water using dyed microspheres. Water Research. 42: 677-88. PMID 17888484 DOI: 10.1016/j.watres.2007.08.019  1
2008 Haglund EM, Seale-Goldsmith MM, Dhawan D, Stewart J, Ramos-Vara J, Cooper CL, Reece LM, Husk T, Bergstrom D, Knapp D, Leary JF. Peptide targeting of quantum dots to human breast cancer cells Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6866. DOI: 10.1117/12.764107  1
2008 Lahiji RR, Dolash BD, McDonald J, Zemlyanov D, Bergstrom DE, Reifenberger R. Electrodeposition study of ODN:SWCNT hybrids on gold substrates Physica Status Solidi (a) Applications and Materials Science. 205: 1408-1411. DOI: 10.1002/pssa.200778153  1
2008 Rozhkov RV, Jo Davisson V, Bergstrom DE. Fluorogenic transformations based on formation of C-C bonds catalyzed by palladium: An efficient approach for high throughput optimizations and kinetic studies Advanced Synthesis and Catalysis. 350: 71-75. DOI: 10.1002/adsc.200700384  1
2008 Ahmadian M, Bergstrom DE. 5-Substituted Nucleosides in Biochemistry and Biotechnology Modified Nucleosides: in Biochemistry, Biotechnology and Medicine. 249-276. DOI: 10.1002/9783527623112.ch10  1
2008 Husk T, Bergstrom DE. Assembly of nanoscale scaffolds from Peptide Nucleic Acids (PNA) Technical Proceedings of the 2008 Nsti Nanotechnology Conference and Trade Show, Nsti-Nanotech, Nanotechnology 2008. 3: 677-680.  1
2008 Dolash BD, Lahiji RR, Zemlyanov DY, Reifenberger R, Bergstrom DE. DNA-associated single-walled carbon nanotubes as a platform for drug delivery Technical Proceedings of the 2008 Nsti Nanotechnology Conference and Trade Show, Nsti-Nanotech, Nanotechnology 2008. 2: 419-422.  1
2008 Butler FN, Elibol O, Hines BD, Reddy B, Bashir R, Bergstrom DE. Development of peptide nucleic acid assemblies for application in drug delivery and molecular sensing Technical Proceedings of the 2008 Nsti Nanotechnology Conference and Trade Show, Nsti-Nanotech, Nanotechnology 2008. 2: 369-371.  1
2007 Lahiji RR, Dolash BD, Bergstrom DE, Reifenberger R. Oligodeoxyribonucleotide association with single-walled carbon nanotubes studied by SPM. Small (Weinheim An Der Bergstrasse, Germany). 3: 1912-20. PMID 17935061 DOI: 10.1002/smll.200700184  1
2007 Elibol OH, Reddy B, Nair PR, Alam MA, Bergstrom DE, Bashir R. Selective heating characterization of nanoplate devices for sensing applications 2007 Nsti Nanotechnology Conference and Trade Show - Nsti Nanotech 2007, Technical Proceedings. 2: 198-201.  1
2006 Blatchley ER, Shen C, Naunovic Z, Lin LS, Lyn DA, Robinson JP, Ragheb K, Grégori G, Bergstrom DE, Fang S, Guan Y, Jennings K, Gunaratna N. Dyed microspheres for quantification of UV dose distributions: Photochemical reactor characterization by Lagrangian Actinometry Journal of Environmental Engineering. 132: 1390-1403. DOI: 10.1061/(ASCE)0733-9372(2006)132:11(1390)  1
2006 Blatchley ER, Shen C, Scheible OK, Robinson JP, Ragheb K, Bergstrom DE, Rokjer D. Validation of large-scale, monochromatic UV disinfection systems using dyed microspheres American Water Works Association - Water Quality Technology Conference and Exposition 2006: Taking Water Quality to New Heights. 2822-2841.  1
2006 Blatchley ER, Shen C, Mofidi A, Yun T, Lee C, Robinson JP, Ragheb K, Bergstrom DE. Application of dyed microspheres for characterization of dose distribution delivered by a demonstration-scale mp UV reactor American Water Works Association - Water Quality Technology Conference and Exposition 2006: Taking Water Quality to New Heights. 1479-1494.  1
2005 Adelfinskaya O, Wu W, Davisson VJ, Davisson VJ, Bergstrom DE. Synthesis and structural analysis of oxadiazole carboxamide deoxyribonucleoside analogs. Nucleosides, Nucleotides & Nucleic Acids. 24: 1919-45. PMID 16438058 DOI: 10.1080/15257770500269267  1
2005 Adelfinskaya O, Nashine VC, Bergstrom DE, Davisson VJ. Efficient primer strand extension beyond oxadiazole carboxamide nucleobases. Journal of the American Chemical Society. 127: 16000-1. PMID 16287267 DOI: 10.1021/ja054226j  1
2005 Shen C, Fang S, Bergstrom DE, Blatchley ER. (E)-5-[2-(methoxycarbonyl)ethenyl]cytidine as a chemical actinometer for germicidal UV radiation. Environmental Science & Technology. 39: 3826-32. PMID 15952392 DOI: 10.1021/es049120n  1
2005 Ng PS, Bergstrom DE. Alternative nucleic acid analogues for programmable assembly: hybridization of LNA to PNA. Nano Letters. 5: 107-11. PMID 15792422 DOI: 10.1021/nl048246f  1
2005 Iqbal SM, Balasundaram G, Ghosh S, Bergstrom DE, Bashir R. Direct current electrical characterization of ds-DNA in nanogap junctions Applied Physics Letters. 86: 1-3. DOI: 10.1063/1.1900315  1
2005 Shen C, Blatchley ER, Robinson JP, Bergstrom DE, Mofidi AA. Quantification of UV dose distributions by dyed microspheres for UV reactors delivering radiation other than 254 NM 2005 Water Quality Technology Conference Proceedings, Wqtc 2005 1
2004 Wu W, Bergstrom DE, Jo Davisson V. Chemoenzymatic preparation of nucleoside triphosphates. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 13.2. PMID 18428922 DOI: 10.1002/0471142700.nc1302s16  1
2004 Ng PS, Bergstrom DE. Protein-DNA footprinting by endcapped duplex oligodeoxyribonucleotides. Nucleic Acids Research. 32: e107. PMID 15263063 DOI: 10.1093/nar/gnh103  1
2004 Bergstrom DE. Orthogonal base pairs continue to evolve. Chemistry & Biology. 11: 18-20. PMID 15112991 DOI: 10.1016/j.chembiol.2004.01.007  1
2004 Fang S, Bergstrom DE. Synthesis of a cryptand with tetrahedral connectivity using multiple ring-closing olefin metathesis Tetrahedron Letters. 45: 8501-8504. DOI: 10.1016/j.tetlet.2004.09.090  1
2004 Fang S, Bergstrom DE. Reversible 5′-end biotinylation and affinity purification of synthetic RNA Tetrahedron Letters. 45: 7987-7990. DOI: 10.1016/j.tetlet.2004.09.019  1
2003 Pingle MR, Ng PS, Xu X, Bergstrom DE. Synthesis of endcap dimethoxytrityl phosphoramidites for endcapped oligonucleotides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 5.6. PMID 18428911 DOI: 10.1002/0471142700.nc0506s12  1
2003 Fang S, Bergstrom DE. Reversible biotinylation of the 5'-terminus of oligodeoxyribonucleotides and its application in affinity purification. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 4.20. PMID 18428910 DOI: 10.1002/0471142700.nc0420s14  1
2003 Ng PS, Pingle MR, Balasundarum G, Friedman A, Zu X, Bergstrom DE. Endcaps for stabilizing short DNA duplexes. Nucleosides, Nucleotides & Nucleic Acids. 22: 1635-7. PMID 14565484 DOI: 10.1081/NCN-120023088  1
2003 Fang S, Guan Y, Blatchley ER, Lin LS, Shen CY, Bergstrom DE. Development of a nucleoside analog UV light sensor. Nucleosides, Nucleotides & Nucleic Acids. 22: 703-5. PMID 14565258 DOI: 10.1081/NCN-120022614  1
2003 Paul N, Nashine VC, Hoops G, Zhang P, Zhou J, Bergstrom DE, Davisson VJ. DNA polymerase template interactions probed by degenerate isosteric nucleobase analogs. Chemistry & Biology. 10: 815-25. PMID 14522052 DOI: 10.1016/j.chembiol.2003.08.008  1
2003 Wu W, Bergstrom DE, Davisson VJ. A combination chemical and enzymatic approach for the preparation of azole carboxamide nucleoside triphosphate. The Journal of Organic Chemistry. 68: 3860-5. PMID 12737564 DOI: 10.1021/jo020745i  1
2003 Fang S, Bergstrom DE. Fluoride-cleavable biotinylation phosphoramidite for 5'-end-labeling and affinity purification of synthetic oligonucleotides. Nucleic Acids Research. 31: 708-15. PMID 12527780 DOI: 10.1093/nar/gkg130  1
2003 Fang S, Bergstrom DE. Reversible biotinylation phosphoramidite for 5'-end-labeling, phosphorylation, and affinity purification of synthetic oligonucleotides. Bioconjugate Chemistry. 14: 80-5. PMID 12526696 DOI: 10.1021/bc025626o  1
2003 McNally H, Pingle M, Lee SW, Guo D, Bergstrom DE, Bashir R. Self-assembly of micro- and nano-scale particles using bio-inspired events Applied Surface Science. 214: 109-119. DOI: 10.1016/S0169-4332(03)00266-6  1
2002 Bergstrom DE, Lin X, Wood TD, Witvrouw M, Ikeda S, Andrei G, Snoeck R, Schols D, De Clercq E. Polysulfonates derived from metal thiolate complexes as inhibitors of HIV-1 and various other enveloped viruses in vitro. Antiviral Chemistry & Chemotherapy. 13: 185-95. PMID 12448691  1
2002 Lee SW, McNally HA, Guo D, Pingle M, Bergstrom DE, Bashir R. Electric-field-mediated assembly of silicon islands coated with charged molecules Langmuir. 18: 3383-3386. DOI: 10.1021/la0156558  1
2001 Bergstrom DE. Unnatural nucleosides with unusual base pairing properties. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.4. PMID 18428819 DOI: 10.1002/0471142700.nc0104s05  1
2001 Ahmadian M, Klewer DA, Bergstrom DE. Palladium-mediated C5 substitution of pyrimidine nucleosides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.1. PMID 18428816 DOI: 10.1002/0471142700.nc0101s00  1
2001 Bergstrom DE. Characteristics of nucleic acids. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Appendix 1B. PMID 18428806 DOI: 10.1002/0471142700.nca01bs00  1
2001 Klewer DA, Zhang P, Bergstrom DE, Davisson VJ, LiWang AC. Conformations of nucleoside analogue 1-(2'-deoxy-beta-D-ribofuranosyl)-1,2,4-triazole-3-carboxamide in different DNA sequence contexts. Biochemistry. 40: 1518-27. PMID 11327810 DOI: 10.1021/bi001448f  1
2001 Zhang BP, Egholm M, Paul N, Pingle M, Bergstrom DE. Peptide nucleic acid-DNA duplexes containing the universal base 3-nitropyrrole. Methods (San Diego, Calif.). 23: 132-40. PMID 11181032 DOI: 10.1006/meth.2000.1114  1
2000 Klewer DA, Hoskins A, Zhang P, Davisson VJ, Bergstrom DE, LiWang AC. NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control. Nucleic Acids Research. 28: 4514-22. PMID 11071940 DOI: 10.1093/nar/28.22.4514  1
2000 Guan Y, Green MA, Bergstrom DE. Synthesis of compound libraries based on 3,4-diaminocyclopentanol scaffolds Journal of Combinatorial Chemistry. 2: 297-300. PMID 10891094  1
2000 Wang Z, Guan Y, Fanwick PE, Stowell JG, Bergstrom DE, Green MA. cis-3,4-Diaminocyclopentanol complexes of platinum(II) Inorganica Chimica Acta. 307: 57-62.  1
1999 Zirvi M, Bergstrom DE, Saurage AS, Hammer RP, Barany F. Improved fidelity of thermostable ligases for detection of microsatellite repeat sequences using nucleoside analogs. Nucleic Acids Research. 27: e41. PMID 10572193  1
1999 Day JP, Hammer RP, Bergstrom D, Barany F. Nucleotide analogs and new buffers improve a generalized method to enrich for low abundance mutations. Nucleic Acids Research. 27: 1819-27. PMID 10101189 DOI: 10.1093/nar/27.8.1819  1
1999 Day JP, Bergstrom D, Hammer RP, Barany F. Nucleotide analogs facilitate base conversion with 3' mismatch primers. Nucleic Acids Research. 27: 1810-8. PMID 10101188 DOI: 10.1093/nar/27.8.1810  1
1999 Orson FM, Klysik J, Bergstrom DE, Ward B, Glass GA, Hua P, Kinsey BM. Triple helix formation: binding avidity of acridine-conjugated AG motif third strands containing natural, modified and surrogate bases opposed to pyrimidine interruptions in a polypurine target. Nucleic Acids Research. 27: 810-6. PMID 9889277 DOI: 10.1093/nar/27.3.810  1
1999 Guan Y, Green MA, Bergstrom DE. Stereocontrolled synthesis of (1R,3R,4S)- and (1S,3R,4S)-3,4- diaminocyclopentanols Synlett. 426-428.  1
1999 Wang Z, Guan Y, Fanwick PE, Bergstrom DE, Green MA. Tetradentate schiff-base ligands for possible use in preparation of estrogen-mimetic copper radiopharmaceuticals Journal of Labelled Compounds and Radiopharmaceuticals. 42.  1
1998 Ahmadian M, Bergstrom DE. A simple and regioselective synthesis of 13C-methyl-labeled thymidine Nucleosides and Nucleotides. 17: 1183-1190. PMID 9708316 DOI: 10.1080/07328319808004231  1
1998 Bergstrom DE, Zhang P, Paul N. dsDNA stability dependence on pH and salt concentration. Biotechniques. 24: 992-4. PMID 9631190  1
1998 Ahmadian M, Zhang P, Bergstrom DE. A comparative study of the thermal stability of oligodeoxyribonucleotides containing 5-substituted 2'-deoxyuridines Nucleic Acids Research. 26: 3127-3135. PMID 9628909 DOI: 10.1093/nar/26.13.3127  1
1998 Zhang P, Johnson WT, Klewer D, Paul N, Hoops G, Davisson VJ, Bergstrom DE. Exploratory studies on azole carboxamides as nucleobase analogs: thermal denaturation studies on oligodeoxyribonucleotide duplexes containing pyrrole-3-carboxamide. Nucleic Acids Research. 26: 2208-15. PMID 9547282 DOI: 10.1093/nar/26.9.2208  1
1997 Hoops GC, Zhang P, Johnson WT, Paul N, Bergstrom DE, Davisson VJ. Template directed incorporation of nucleotide mixtures using azole-nucleobase analogs. Nucleic Acids Research. 25: 4866-71. PMID 9396789 DOI: 10.1093/nar/25.24.4866  1
1997 Bergstrom DE, Zhang P, Johnson WT. Comparison of the base pairing properties of a series of nitroazole nucleobase analogs in the oligodeoxyribonucleotide sequence 5'-d(CGCXAATTYGCG)-3'. Nucleic Acids Research. 25: 1935-42. PMID 9115360 DOI: 10.1093/nar/25.10.1935  1
1997 Johnson WT, Zhang P, Bergstrom DE. The synthesis and stability of oligodeoxyribonucleotides containing the deoxyadenosine mimic 1-(2'-deoxy-beta-D-ribofuranosyl)imidazole-4-carboxamide. Nucleic Acids Research. 25: 559-67. PMID 9016596 DOI: 10.1093/nar/25.3.559  1
1997 Shi J, Bergstrom DE. Assembly of novel DNA cycles with rigid tetrahedral linkers Angewandte Chemie - International Edition in English. 36: 111-113.  1
1997 Hoops GC, Zhang P, Johnson WT, Paul N, Chen X, Bergstrom DE, Davisson VJ. Degenerate azole nucleosides direct the incorporation of mixtures of nucleotides in reactions catalyzed by thermostable DNA polymerases Faseb Journal. 11: A1370.  1
1997 Bergstrom DE, Zhang P, Johnson WT, Klewer D, Paul N, Hoops GC, Jo Davisson V. 1,3-Azolecarboxamide nucleobase analogs: Design, synthesis, and thermo dynamic studies Faseb Journal. 11.  1
1996 Luo J, Bergstrom DE, Barany F. Improving the fidelity of Thermus thermophilus DNA ligase Nucleic Acids Research. 24: 3071-3078. PMID 8760896  1
1996 Bergstrom DE, Chen J. Sequence-specific oligodeoxyribonucleotide cleavage by a major-groove-positioned metal-binding ligand tethered to C-5 to deoxyuridine Bioorganic and Medicinal Chemistry Letters. 6: 2211-2214. DOI: 10.1016/0960-894X(96)00402-7  1
1996 Hoops GC, Zhang P, Johnson TW, Bergstrom DE, Davisson VJ. Recognition of selected azoles as degenerate bases by thermus aquaticus DNA polymerase Faseb Journal. 10: A1124.  1
1995 Bergstrom DE, Zhang P, Toma PH, Andrews PC, Nichols R. Synthesis, structure, and deoxyribonucleic acid sequencing with a universal nucleoside: 1-(2′-deoxy-β-D-ribofuranosyl)-3-nitropyrrole Journal of the American Chemical Society. 117: 1201-1209.  1
1994 Nichols R, Andrews PC, Zhang P, Bergstrom DE. A universal nucleoside for use at ambiguous sites in DNA primers Nature. 369: 492-493. PMID 8202140 DOI: 10.1038/369492a0  1
1994 Bergstrom DE, Gerry NP. Precision sequence-specific cleavage of a nucleic acid by a minor-groove-directed metal-binding ligand linked through N-2 of deoxyguanosine Journal of the American Chemical Society. 116: 12067-12068. DOI: 10.1021/ja00105a063  1
1994 Dalla Riva Toma JM, Bergstrom DE. Transition metal labeling of oligodeoxyribonucleotides: Synthesis and characterization of (pentacarbonyl)tungsten(0) nucleoside phosphites Journal of Organic Chemistry. 59: 2418-2422.  1
1994 Bergstrom DE, Zhang P, Zhou J. Synthesis of 2′-deoxy-β-d-ribofuranosyl imidazole and thiazole C-nucleosides Journal of the Chemical Society, Perkin Transactions. 3029-3034.  1
1993 Bergstrom DE, Wang G, Toma JD, Gerry N, Nichols R, Andrews P. Re-engineering DNA: design, synthesis, and properties of modified nucleic acids Nucleic Acids Symposium Series. 11-12. PMID 8247727  1
1993 Toma PH, Dalla Riva Toma JM, Bergstrom DE. Structure of 5-chloromercurio-2'-deoxyuridine Acta Crystallographica, Section C: Crystal Structure Communications. 49. PMID 8110423 DOI: 10.1107/S0108270193007565  1
1993 Wang G, Bergstrom DE. Synthesis of oligonucleotides containing N2-[2-(imidazol-4-ylacetamido)ethyll-2′-deoxyguanosine Tetrahedron Letters. 34: 6725-6728. DOI: 10.1016/S0040-4039(00)61685-4  1
1993 Wang G, Bergstrom DE. Synthesis of oligonucleotides containing N2-(5-carboxypentyl)-2′-deoxyguanosine and 5-[2-(4′-methyl-2,2′-dipyrid-4-yl-carboxamido)ethylthio]-2′-deoxyuridine Tetrahedron Letters. 34: 6721-6724. DOI: 10.1016/S0040-4039(00)61684-2  1
1993 Dalla Riva Toma JM, Toma PH, Fanwick PE, Bergstrom DE, Byrn SR. Photochemical synthesis and crystal structure of two potentially useful metal carbonyl complexes: pentacarbonyl(η2-cis-cyclooctene)-tungsten(0) and tetracarbonylbis(η2-cis-cyclooctene)tungsten(0) Journal of Crystallographic and Spectroscopic Research. 23: 41-47. DOI: 10.1007/BF01161286  1
1992 Bergstrom DE, Mott AW, De Clercq E, Balzarini J, Swartling DJ. 3′,3′-Difluoro-3′-deoxythymidine: Comparison of anti-HIV activity to 3′-fluoro-3′-deoxythymidine Journal of Medicinal Chemistry. 35: 3369-3372. PMID 1527788 DOI: 10.1021/jm00096a011  1
1991 Bergstrom DE, Abrahamson JK, Chan MY. Nucleoside and nucleotide transport through a model liquid membrane. Periodic-catastrophic transport of a novel amantadine phosphoramidate conjugate of 5'-AMP. Biochimica Et Biophysica Acta. 1061: 95-105. PMID 1995060 DOI: 10.1016/0005-2736(91)90273-B  1
1991 Bergstrom DE, Swartling DJ, Wisor A, Hoffmann MR. Evaluation of thymidine, dideoxythymidine and fluorine substituted deoxyribonucleoside geometry by the mindo/3 technique: The effect of fluorine substitution on nucleoside geometry and biological activity Nucleosides and Nucleotides. 10: 693-697. DOI: 10.1080/07328319108046575  1
1991 Bergstrom DE, Lin X. Recent advances in palladium-mediated reactions of nucleosides Nucleosides and Nucleotides. 10: 689-691. DOI: 10.1080/07328319108046574  1
1991 Bergstrom DE, Abrahamson JK, Chan MYM. Periodic-catastrophic transport of an adenosine 5'-monophosphate amantadine conjugate through a model liquid membrane Nucleosides and Nucleotides. 10: 685-688. DOI: 10.1080/07328319108046573  1
1991 Bergstrom DE, Zhang P. An efficient route to C-4 linked imidazole nucleosides : synthesis of 2-carbamoyl-4-(2′-deoxy-β-d-ribofuranosyl)imidazole Tetrahedron Letters. 32: 6485-6488. DOI: 10.1016/0040-4039(91)80199-G  1
1991 Bergstrom DE, Beal P, Jenson J, Lin X. Palladium-mediated synthesis of C-5 pyrimidine nucleoside thioethers from disulfides and mercurinucleosides Journal of Organic Chemistry. 56: 5598-5602.  1
1989 Bergstrom D, Beal P, Lind R. Synthesis of (Dicarbonyl)(Ƞ5-cyclopentadienyl)Manganese Complex Stabilized Nucleoside Phosphite Esters Nucleosides and Nucleotides. 8: 1061-1063. DOI: 10.1080/07328318908054281  0.36
1989 Froehlich ML, Swartling DJ, Lind RE, Mott AW, Bergstrom DE, Maag H, Coll RL. An improved synthesis of 3‘-keto-5’-0-tritylthymidine Nucleosides and Nucleotides. 8: 1529-1535. DOI: 10.1080/07328318908048860  1
1988 Bergstrom DE, Shum PW. Synthesis and characterization of a new fluorine substituted nonionic dinucleoside phosphonate analogue, P-deoxy-P-(difluoromethyl)thymidylyl(3′→5′)thymidine Journal of Organic Chemistry. 53: 3953-3958.  1
1986 De Clercq E, Bernaerts R, Bergstrom DE, Robins MJ, Montgomery JA, Holy A. Antirhinovirus activity of purine nucleoside analogs. Antimicrobial Agents and Chemotherapy. 29: 482-7. PMID 3013084  1
1985 Kahilainen LI, Bergstrom DE, Vilpo JA. 5-Hydroxymethyl-2'-deoxyuridine. Cytotoxicity and DNA incorporation studies by using a novel [2-14C]-derivative with normal and leukemic human hematopoietic cells Acta Chem. Scand.. 39: 477-484. PMID 4060961  1
1984 Bergstrom DE, Brattesani AJ, Ogawa MK, Reddy PA, Schweickert MJ, Balzarini J, De Clercq E. Antiviral activity of C-5 substituted tubercidin analogues Journal of Medicinal Chemistry. 27: 285-292. PMID 6699874  1
1984 De Clercq E, Bergstrom DE, John AH, Montgomery A. Broad-spectrum antiviral activity of adenosine analogues Antiviral Research. 4: 119-133. PMID 6476818 DOI: 10.1016/0166-3542(84)90012-3  1
1984 Crow FW, Tomer KB, Gross ML, McCloskey JA, Bergstrom DE. Fast atom bombardment combined with tandem mass spectrometry for the determination of nucleosides. Analytical Biochemistry. 139: 243-62. PMID 6331227 DOI: 10.1016/0003-2697(84)90412-3  1
1984 Bergstrom DE, Ruth JL, Reddy PA, De Clercq E. Synthesis of (E)-5-(3,3,3-trifluoro-1-propenyl)-2′-deoxyuridine and related analogues: Potent and unusually selective antiviral activity of (E)-5-(3,3,3-trifluoro-1-propenyl)-2′-deoxyuridine against herpes simplex virus type 1 Journal of Medicinal Chemistry. 27: 279-284. PMID 6321735  1
1983 Bergstrom DE, Ng MW, Wong JJ. Addition reaction of 3,3,3-trifluoropropene to tetrahydrofuran. Telomeric growth via free-radical rearrangements Journal of the Chemical Society, Perkin Transactions 1. 741-745.  1
1983 Bergstrom DE, Ng MW, Wong JJ. Cu(I)-catalyzed coupling reaction between phenylmagnesium bromide and 3,3,3-trifluoropropene Journal of Organic Chemistry. 48: 1902-1903.  1
1983 Crow FW, Tomer KB, Gross ML, McCloskey JA, Bergstrom DE. POSITIVE AND NEGATIVE FAB AND FAB MS/MS OF NATURAL AND MODIFIED NUCLEOSIDES Annual Conference On Mass Spectrometry and Allied Topics. 726-727.  1
1982 de Clercq E, Balzarini J, Descamps J, Huang GF, Torrence PF, Bergstrom DE, Jones AS, Serafinowski P, Verhelst G, Walker RT. Antiviral, antimetabolic, and cytotoxic activities of 5-substituted 2'-deoxycytidines Molecular Pharmacology. 21: 217-223. PMID 7132959  1
1982 Bergstrom DE. Organometallic Intermediates in the Synthesis of Nucleoside Analogs Nucleosides and Nucleotides. 1: 1-34. DOI: 10.1080/07328318208079399  1
1982 Bergstrom DE, Reddy PA. Synthesis of 6-alkyl and 6-aryl substituted 9-β-D-ribofuranosyl purines via the nickel catalyzed coupling of grignard reagents to 2′,3′,5′-tris-0-(t-butyldimethylsilysl)-9-β-D-ribofuranosyl-6-chloropurine Tetrahedron Letters. 23: 4191-4194. DOI: 10.1016/S0040-4039(00)88701-8  1
1982 Ruth JL, White SK, Bergstrom DE. Direct preparation of 14C-labeled 5-allyl- and 5-propyl-2'-deoxyuridine from [2-14C]2'-deoxyuridine Journal of Labelled Compounds and Radiopharmaceuticals. 19: 861-866. DOI: 10.1002/jlcr.2580190706  1
1982 Bergstrom DE, Inoue H, Reddy PA. Pyrido[2,3-d]pyrimidine nucleosides. Synthesis via cyclization of C-5-substituted cytidines Journal of Organic Chemistry. 47: 2174-2178.  1
1981 De Clercq E, Verhelst G, Descamps J, Bergstrom DE. Differential inhibition of herpes simplex viruses, type 1 (HSV-1) and type 2 (HSV-2) by (E)-5-(2-X-vinyl)-2'-deoxyuridines Acta Microbiologica Academiae Scientiarum Hungaricae. 28: 307-312. PMID 6272553  1
1981 Bergstrom DE, Ruth JL, Warwick P. C-5-Substituted pyrimidine nucleosides. 3. Reaction of allylic chlorides, alcohols, and acetates with pyrimidine nucleoside derived organopalladium intermediates Journal of Organic Chemistry. 46: 1432-1441.  1
1981 Bergstrom DE, Brattesani AJ, Ogawa MK, Schweickert MJ. Pyrrolo[2,3-d]pyrimidine nucleoside antibiotic analogues. Synthesis via organopalladium intermediates derived from 5-mercuritubercidin Journal of Organic Chemistry. 46: 1423-1431.  1
1980 Cheng YC, Grill S, Ruth J, Bergstrom DE. Anti-herpes simplex virus and anti-human cell growth activity of E-5-propenyl-2'-deoxyuridine and the concept of selective protection in antivirus chemotherapy Antimicrobial Agents and Chemotherapy. 18: 957-961. PMID 6263181  1
1980 Bergstrom DE, Brattesani AJ. Halogenation of tubercidin by N-halosuccinimides. A direct route to 5-bromotubercidin, a reversible inhibitor of RNA synthesis in eukaryotic cells Nucleic Acids Research. 8: 6213-6219. PMID 6162160 DOI: 10.1093/nar/8.24.6213  1
1980 Cheng Y, Grill S, Bergstrom DE, Ruth J. Antivirus and antihuman cell growth activity of 5-propenyl 2'-deoxyuridine Federation Proceedings. 39: 3118.  1
1979 Wataya Y, Matsuda A, Santi DV, Bergstrom DE, Ruth JL. trans-5-(3,3,3-trifluoro-1-propenyl)-2′-deoxyuridylate: A mechanism-based inhibitor of thymidylate synthetase Journal of Medicinal Chemistry. 22: 339-340. PMID 430474  1
1979 Bergstrom DE, Rash KF. Synthesis of 5,6-dihydro-5-(α-thyminyl)thymine Journal of Organic Chemistry. 44: 1414-1417.  1
1978 Bergstrom DE, Rash KF. Synthesis of a photoproduct from ultraviolet-irradiation of bacterial spores: 5,6-dihydro-5-(α-thyminyl)thymine Journal of the Chemical Society, Chemical Communications. 284. DOI: 10.1039/C39780000284  1
1978 Ruth JL, Bergstrom DE. C-5 substituted pyrimidine nucleosides. 1. Synthesis of C-5 allyl, propyl, and propenyl uracil and cytosine nucleosides via organopalladium intermediates Journal of Organic Chemistry. 43: 2870-2876.  1
1978 Bergstrom DE, Ogawa MK. C-5 substituted pyrimidine nucleosides. 2. Synthesis via olefin coupling to organopalladium intermediates derived from uridine and 2′-deoxyuridine Journal of the American Chemical Society. 100: 8106-8112.  1
1978 Bergstrom DE, Schweickert MJ. Preparation of C-5 mercurated tubercidin and C-5, C-6 dimercurated tubercidin Journal of Carbohydrates Nucleosides Nucleotides. 5: 285-296.  1
1976 Bergstrom DE, Ruth JL. Synthesis of C-5 substituted pyrimidine nucleosides via organopalladium intermediates [6] Journal of the American Chemical Society. 98: 1587-1589. PMID 1249369 DOI: 10.1021/ja00422a056  1
1972 Bergstrom DE, Inoue I, Leonard NJ. Synthesis of the 335-nm photoproduct of cytosine and 4-thiouracil. The Journal of Organic Chemistry. 37: 3902-5. PMID 4642387 DOI: 10.1021/jo00797a029  0.96
1972 Bergstrom DE, Leonard NJ. Structure of the borohydride reduction product of photolinked 4-thiouracil and cytosine. Fluorescent probe of transfer ribonucleic acid tertiary structure. Journal of the American Chemical Society. 94: 6178-82. PMID 4559940 DOI: 10.1021/ja00772a041  0.96
1972 Bergstrom DE, Leonard NJ. Photoreaction of 4-thiouracil with cytosine. Relation to photoreactions in Escherichia coli transfer ribonucleic acids Biochemistry. 11: 1-9. PMID 4550555 DOI: 10.1021/bi00751a001  0.96
1971 Leonard NJ, Bergstrom DE, Tolman GL. Photoproducts from 4-thiouracil and cytosine and from 4-thiouridine and cytidine: Refinement of tertiary tRNA structure Biochemical and Biophysical Research Communications. 44: 1524-1530. PMID 5160710 DOI: 10.1016/S0006-291X(71)80259-0  0.96
Show low-probability matches.