Charles N. Zink, Ph.D. - Related publications

2009 Chemistry University of Maryland, Baltimore County 
Organic Chemistry, Analytical Chemistry
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Sui Z, An R, Komiyama M, Liang X. Stepwise strategy for one-pot synthesis of single-stranded DNA rings from multiple short fragments. Chembiochem : a European Journal of Chemical Biology. PMID 33124728 DOI: 10.1002/cbic.202000738   
2020 Zhao F, Kim W, Kloeber JA, Lou Z. DNA end resection and its role in DNA replication and DSB repair choice in mammalian cells. Experimental & Molecular Medicine. PMID 33122806 DOI: 10.1038/s12276-020-00519-1   
2020 Chaplin AK, Hardwick SW, Liang S, Kefala Stavridi A, Hnizda A, Cooper LR, De Oliveira TM, Chirgadze DY, Blundell TL. Dimers of DNA-PK create a stage for DNA double-strand break repair. Nature Structural & Molecular Biology. PMID 33077952 DOI: 10.1038/s41594-020-00517-x   
2020 Guan L, Zhao J, Sun W, Deng W, Wang L. -Substituted Thiazole Orange for Selective Fluorescence Detection to G-Quadruplex DNA and Molecular Docking Simulation. Acs Omega. 5: 26056-26062. PMID 33073132 DOI: 10.1021/acsomega.0c03556   
2020 Marshall CJ, Santangelo TJ. Archaeal DNA Repair Mechanisms. Biomolecules. 10. PMID 33113933 DOI: 10.3390/biom10111472   
2020 He F, DuPrez K, Hilario E, Chen Z, Fan L. Structural basis of the XPB helicase-Bax1 nuclease complex interacting with the repair bubble DNA. Nucleic Acids Research. PMID 32986831 DOI: 10.1093/nar/gkaa801   
2020 Inagawa T, Wennink T, Lebbink JHG, Keijzers G, Florea BI, Verkaik NS, van Gent DC. C-Terminal Extensions of Ku70 and Ku80 Differentially Influence DNA End Binding Properties. International Journal of Molecular Sciences. 21. PMID 32937838 DOI: 10.3390/ijms21186725   
2020 Heintz N, Gong S. Growth of and Preparation of DNA. Cold Spring Harbor Protocols. 2020: pdb.prot098145. PMID 33004551 DOI: 10.1101/pdb.prot098145   
2020 Copp W, Wilds CJ. O -Alkylguanine DNA Alkyltransferase Mediated Disassembly of a DNA Tetrahedron. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 32543755 DOI: 10.1002/chem.202002565   
2020 Li C, Li H, Jie G. Click chemistry reaction-triggered DNA walker amplification coupled with hyperbranched DNA nanostructure for versatile fluorescence detection and drug delivery to cancer cells. Mikrochimica Acta. 187: 625. PMID 33095314 DOI: 10.1007/s00604-020-04580-5   
2020 Sharma D, Singh A, Pathak M, Kaur L, Kumar V, Roy BG, Ojha H. DNA binding and antiradical potential of ethyl pyruvate: Key to the DNA radioprotection. Chemico-Biological Interactions. 109313. PMID 33171137 DOI: 10.1016/j.cbi.2020.109313   
2020 Ouaray Z, Benner SA, Georgiadis MM, Richards NGJ. Building better DNA polymerases: Engineering the replication of expanded genetic alphabets. The Journal of Biological Chemistry. PMID 33004440 DOI: 10.1074/jbc.REV120.013745   
2020 Hakim HM, Khan HO, Lalung J, Nelson BR, Chambers GK, Edinur HA. Autosomal STR Profiling and Databanking in Malaysia: Current Status and Future Prospects. Genes. 11. PMID 32977385 DOI: 10.3390/genes11101112   
2020 Lv H, Chen A, Cheng W, Kong L, Zhao M, Ding S, Ju H, Cheng W. Efficient DNA Walker Guided with Well-Regulated Interfacial Tracks for Ultrasensitive Electrochemiluminescence Biosensing. Analytical Chemistry. PMID 33170673 DOI: 10.1021/acs.analchem.0c03893   
2020 Wan Y, Wang H, Ji J, Kang K, Yang M, Huang Y, Su Y, Ma K, Zhu L, Deng S. Zippering DNA Tetrahedral Hyperlink for Ultrasensitive Electrochemical MicroRNA Detection. Analytical Chemistry. PMID 33119272 DOI: 10.1021/acs.analchem.0c03553   
2020 Sparks MA, Burgers PM, Galletto R. Pif1, RPA and FEN1 modulate the ability of DNA polymerase δ to overcome protein barriers during DNA synthesis. The Journal of Biological Chemistry. PMID 32913126 DOI: 10.1074/jbc.RA120.015699   
2020 Wang X, Yang X. A Simple Blocking PCR-Based Method for the Synthesis of High-Copy dsDNA Tandem Repeats. Small (Weinheim An Der Bergstrasse, Germany). e2003671. PMID 33006262 DOI: 10.1002/smll.202003671   
2020 Wang X, Yang X. A Simple Blocking PCR-Based Method for the Synthesis of High-Copy dsDNA Tandem Repeats. Small (Weinheim An Der Bergstrasse, Germany). e2003671. PMID 33006262 DOI: 10.1002/smll.202003671   
2020 Lin MG, Li YC, Hsiao CD. Characterization of Streptococcus pneumoniae PriA helicase and its ATPase and unwinding activities in DNA replication restart. The Biochemical Journal. PMID 32985663 DOI: 10.1042/BCJ20200269   
2020 Desai PR, Brahmachari S, Marko JF, Das S, Neuman KC. Coarse-grained modelling of DNA plectoneme pinning in the presence of base-pair mismatches. Nucleic Acids Research. PMID 33045724 DOI: 10.1093/nar/gkaa836   
2020 Liu N, Zhang X, Tang X, Liu Y, Huang D, Xiao X. A double-stranded DNA catalyzed strand displacement system for detection of small genetic variations. Chemical Communications (Cambridge, England). PMID 33140767 DOI: 10.1039/d0cc06216b   
2020 Hammel M, Rosenberg DJ, Bierma J, Hura GL, Lees-Miller SP, Tainer JA. Visualizing functional dynamicity in the DNA-dependent protein kinase holoenzyme DNA-PK complex by integrating SAXS with cryo-EM. Progress in Biophysics and Molecular Biology. PMID 32966823 DOI: 10.1016/j.pbiomolbio.2020.09.003   
2020 Flood DT, Knouse KW, Vantourout JC, Kitamura S, Sanchez BB, Sturgell EJ, Chen JS, Wolan DW, Baran PS, Dawson PE. Synthetic Elaboration of Native DNA by RASS (SENDR). Acs Central Science. 6: 1789-1799. PMID 33145415 DOI: 10.1021/acscentsci.0c00680   
2020 Kaminski AM, Bebenek K, Pedersen LC, Kunkel TA. DNA polymerase mu: An inflexible scaffold for substrate flexibility. Dna Repair. 93: 102932. PMID 33087269 DOI: 10.1016/j.dnarep.2020.102932   
2020 Peyrégne S, Peter BM. AuthentiCT: a model of ancient DNA damage to estimate the proportion of present-day DNA contamination. Genome Biology. 21: 246. PMID 32933569 DOI: 10.1186/s13059-020-02123-y   
2020 Peyrégne S, Peter BM. AuthentiCT: a model of ancient DNA damage to estimate the proportion of present-day DNA contamination. Genome Biology. 21: 246. PMID 32933569 DOI: 10.1186/s13059-020-02123-y   
2020 Huang Z, Zhao Y, Liu B, Guan S, Liu J. Stronger Adsorption of Phosphorothioate DNA Oligonucleotides on Graphene Oxide by van der Waals Forces. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 33161721 DOI: 10.1021/acs.langmuir.0c02761   
2020 Furtwängler A, Neukamm J, Böhme L, Reiter E, Vollstedt M, Arora N, Singh P, Cole ST, Knauf S, Calvignac-Spencer S, Krause-Kyora B, Krause J, Schuenemann VJ, Herbig A. Comparison of target enrichment strategies for ancient pathogen DNA. Biotechniques. PMID 33135465 DOI: 10.2144/btn-2020-0100   
2020 Seela F, Chai Y, Kondhare D, Zhang A, Leonard P. The 2-Amino Group of 8-Aza-7-deaza-7-bromopurine-2,6-diamine and Purine-2,6-diamine as Stabilizer for the Adenine-Thymine Base Pair in Heterochiral DNA with Strands in Anomeric Configuration. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 33090562 DOI: 10.1002/chem.202004221   
2020 Zhang XX, Brantley SL, Corcelli SA, Tokmakoff A. DNA minor-groove binder Hoechst 33258 destabilizes base-pairing adjacent to its binding site. Communications Biology. 3: 525. PMID 32963293 DOI: 10.1038/s42003-020-01241-4   
2020 Chen Y, Geng A, Zhang W, Qian Z, Wan X, Jiang Y, Mao Z. Fight to the bitter end: DNA repair and aging. Ageing Research Reviews. 101154. PMID 32977059 DOI: 10.1016/j.arr.2020.101154   
2020 Wang L, Song K, Qu Y, Chang Y, Li Z, Dong C, Liu M, Brennan J, Li Y. Engineering Micrometer-sized DNA Tracks for High-Speed DNA Synthesis and Biosensing. Angewandte Chemie (International Ed. in English). PMID 33007137 DOI: 10.1002/anie.202010693   
2020 Åsenius F, Gorrie-Stone TJ, Brew A, Panchbhaya Y, Williamson E, Schalkwyk LC, Rakyan VK, Holland ML, Marzi SJ, Williams DJ. The DNA methylome of human sperm is distinct from blood with little evidence for tissue-consistent obesity associations. Plos Genetics. 16: e1009035. PMID 33048947 DOI: 10.1371/journal.pgen.1009035   
2020 De Riso G, Fiorillo DFG, Fierro A, Cuomo M, Chiariotti L, Miele G, Cocozza S. Modeling DNA Methylation Profiles through a Dynamic Equilibrium between Methylation and Demethylation. Biomolecules. 10. PMID 32899254 DOI: 10.3390/biom10091271   
2020 Weaver TM, Cortez LM, Khoang TH, Washington MT, Agarwal PK, Freudenthal BD. Visualizing Rev1 catalyze protein-template DNA synthesis. Proceedings of the National Academy of Sciences of the United States of America. PMID 32999062 DOI: 10.1073/pnas.2010484117   
2020 Chan RWY, Serpas L, Ni M, Volpi S, Hiraki LT, Tam LS, Rashidfarrokhi A, Wong PCH, Tam LHP, Wang Y, Jiang P, Cheng ASH, Peng W, Han DSC, Tse PPP, et al. Plasma DNA Profile Associated with DNASE1L3 Gene Mutations: Clinical Observations, Relationships to Nuclease Substrate Preference, and In Vivo Correction. American Journal of Human Genetics. PMID 33022220 DOI: 10.1016/j.ajhg.2020.09.006   
2020 Sullivan ED, Longley MJ, Copeland WC. Polymerase γ efficiently replicates through many natural template barriers but stalls at the HSP1 quadruplex. The Journal of Biological Chemistry. PMID 33077518 DOI: 10.1074/jbc.RA120.015390   
2020 Kotandeniya D, Rogers MS, Fernandez J, Kanugula S, Hudson RHE, Rodriguez F, Lipscomb JD, Tretyakova N. 6-phenylpyrrolocytosine as a fluorescent probe to examine nucleotide flipping catalyzed by a DNA repair protein. Biopolymers. e23405. PMID 33098572 DOI: 10.1002/bip.23405   
2020 Miglani K, Kumar S, Yadav A, Aggarwal N, Gupta R. OGG1 DNA Repair Gene Polymorphism As a Biomarker of Oxidative and Genotoxic DNA Damage. Iranian Biomedical Journal. 25: 47-53. PMID 33129239 DOI: 10.29252/ibj.25.1.47   
2020 Buckley RJ, Kramm K, Cooper CDO, Grohmann D, Bolt EL. Mechanistic insights into Lhr helicase function in DNA repair. The Biochemical Journal. 477: 2935-2947. PMID 32706021 DOI: 10.1042/BCJ20200379   
2020 Sallmyr A, Rashid I, Bhandari SK, Naila T, Tomkinson AE. Human DNA ligases in replication and repair. Dna Repair. 93: 102908. PMID 33087274 DOI: 10.1016/j.dnarep.2020.102908   
2020 Ji J, Day A. Construction of a highly error-prone DNA polymerase for developing organelle mutation systems. Nucleic Acids Research. PMID 33135056 DOI: 10.1093/nar/gkaa929   
2020 Miller M, Philpott MK, Olsen A, Tootham M, Yadavalli VK, Ehrhardt CJ. Technical note: Survey of extracellular and cell-pellet-associated DNA from 'touch'/trace samples. Forensic Science International. 110557. PMID 33168421 DOI: 10.1016/j.forsciint.2020.110557   
2020 Wang L, Liu P, Liu Z, Zhao K, Ye S, Liang G, Zhu JJ. Simple Tripedal DNA Walker Prepared by Target-Triggered Catalytic Hairpin Assembly for Ultrasensitive Electrochemiluminescence Detection of MicroRNA. Acs Sensors. PMID 33170660 DOI: 10.1021/acssensors.0c01864   
2020 Yuan Z, Li H. Molecular mechanisms of eukaryotic origin initiation, replication fork progression, and chromatin maintenance. The Biochemical Journal. 477: 3499-3525. PMID 32970141 DOI: 10.1042/BCJ20200065   
2020 Bhatia DD, Wunder C, Johannes L. Self-assembled, programmable DNA nanodevices for biological and biomedical applications. Chembiochem : a European Journal of Chemical Biology. PMID 32961015 DOI: 10.1002/cbic.202000372   
2020 Ondruš M, Sýkorová V, Bednárová L, Pohl R, Hocek M. Enzymatic synthesis of hypermodified DNA polymers for sequence-specific display of four different hydrophobic groups. Nucleic Acids Research. PMID 33152081 DOI: 10.1093/nar/gkaa999   
2020 Li Y, Huang Q, Yao G, Wang X, Zhang F, Wang T, Shao C, Zheng X, Jing X, Zhou H. Remodeling Chromatin Induces Z-DNA Conformation Detected through Fourier Transform Infrared Spectroscopy. Analytical Chemistry. PMID 33085464 DOI: 10.1021/acs.analchem.0c02432   
2020 Paul D, Mu H, Tavakoli A, Dai Q, Chen X, Chakraborty S, He C, Ansari A, Broyde S, Min JH. Tethering-facilitated DNA 'opening' and complementary roles of β-hairpin motifs in the Rad4/XPC DNA damage sensor protein. Nucleic Acids Research. PMID 33119737 DOI: 10.1093/nar/gkaa909   
2020 Obi I, Rentoft M, Singh V, Jamroskovic J, Chand K, Chorell E, Westerlund F, Sabouri N. Stabilization of G-quadruplex DNA structures in Schizosaccharomyces pombe causes single-strand DNA lesions and impedes DNA replication. Nucleic Acids Research. PMID 33045725 DOI: 10.1093/nar/gkaa820