William S. Hancock - Publications

Affiliations: 
2002- Chemistry Northeastern University, Boston, MA, United States 
Area:
Proteomics, Biotechnology
Website:
http://cbi.mit.edu/research-overview/bioman/bioman-news-events/2012-biomanufacturing-summit-details/william-s-hancock-phd/

104 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Crowell LE, Lu AE, Love KR, Stockdale A, Timmick SM, Wu D, Wang YA, Doherty W, Bonnyman A, Vecchiarello N, Goodwine C, Bradbury L, Brady JR, Clark JJ, Colant NA, ... ... Hancock WS, et al. On-demand manufacturing of clinical-quality biopharmaceuticals. Nature Biotechnology. PMID 30272677 DOI: 10.1038/nbt.4262  0.68
2018 Herrington WF, Singh GP, Wu D, Barone PW, Hancock W, Ram RJ. Optical Detection of Degraded Therapeutic Proteins. Scientific Reports. 8: 5089. PMID 29572496 DOI: 10.1038/s41598-018-23409-z  0.44
2017 Wang YA, Wu D, Auclair JR, Salisbury JP, Sarin R, Tang Y, Mozdzierz NJ, Shah K, Zhang AF, Wu SL, Agar JN, Love JC, Love KR, Hancock WS. Integrated bottom-up and top-down liquid chromatography-mass spectrometry (LC-MS) for characterization of recombinant human growth hormone degradation products. Analytical Chemistry. PMID 29096433 DOI: 10.1021/acs.analchem.7b03026  0.68
2017 Na K, Shin H, Cho JY, Jung SH, Lim J, Lim JS, Kim EA, Kim HS, Kang AR, Kim JH, Shin JM, Jeong SK, Kim CY, Park JY, Chung HM, ... ... Hancock WS, et al. A systematic proteogenomic approach to exploring a novel function for NHERF1 in human reproductive disorder: lessons for exploring missing proteins. Journal of Proteome Research. PMID 28960081 DOI: 10.1021/acs.jproteome.7b00146  0.32
2017 Liu Y, Wu SL, Love KR, Hancock WS. Characterization of Site-Specific glycosylation in Influenza A Virus Hemagglutinin produced by Spodoptera frugiperda insect cell line. Analytical Chemistry. PMID 28921955 DOI: 10.1021/acs.analchem.7b03025  0.68
2016 Paik YK, Overall CM, Deutsch EW, Hancock WS, Omenn GS. Progress in the Chromosome-Centric Human Proteome Project as Highlighted in the Annual Special Issue IV. Journal of Proteome Research. 15: 3945-3950. PMID 27809547 DOI: 10.1021/acs.jproteome.6b00803  0.32
2016 Ouyang W, Ko SH, Wu D, Wang AY, Barone PW, Hancock WS, Han J. Rapid Assessment of Therapeutic Proteins Using Molecular Charge Modulation Enhanced Electrokinetic Concentration Assays. Analytical Chemistry. PMID 27624735 DOI: 10.1021/acs.analchem.6b02517  0.44
2016 Deutsch EW, Overall CM, Van Eyk JE, Baker MS, Paik YK, Weintraub ST, Lane L, Martens L, Vandenbrouck Y, Kusebauch U, Hancock WS, Hermjakob H, Aebersold R, Moritz RL, Omenn GS. Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. Journal of Proteome Research. 15: 3961-3970. PMID 27490519 DOI: 10.1021/acs.jproteome.6b00392  0.32
2016 Kim S, Lee HJ, Hahm JH, Jeong SK, Park DH, Hancock WS, Paik YK. Quantitative Profiling Identifies Potential Regulatory Proteins Involved in Developmental from Dauer Stage to L4 Stage in Caenorhabditis elegans. Journal of Proteome Research. PMID 26751275 DOI: 10.1021/acs.jproteome.5b00884  0.32
2015 Yan JF, Kim H, Jeong SK, Lee HJ, Sethi MK, Lee LY, Beavis RC, Im H, Snyder MP, Hofree M, Ideker T, Wu SL, Paik YK, Fanayan S, Hancock WS. Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues. Journal of Proteome Research. PMID 26435392 DOI: 10.1021/acs.jproteome.5b00827  0.8
2015 Paik YK, Omenn GS, Overall CM, Deutsch EW, Hancock WS. Recent Advances in the Chromosome-Centric Human Proteome Project: Missing Proteins in the Spot Light. Journal of Proteome Research. 14: 3409-14. PMID 26337862 DOI: 10.1021/acs.jproteome.5b00785  0.8
2015 Cho JY, Lee HJ, Jeong SK, Kim KY, Kwon KH, Yoo JS, Omenn GS, Baker MS, Hancock WS, Paik YK. Combination of Multiple Spectral Libraries Improves the Current Search Methods Used to Identify Missing Proteins in the Chromosome-Centric Human Proteome Project. Journal of Proteome Research. PMID 26330117 DOI: 10.1021/acs.jproteome.5b00578  0.8
2015 Jeong SK, Hancock WS, Paik YK. GenomewidePDB 2.0: A Newly Upgraded Versatile Proteogenomic Database for the Chromosome-Centric Human Proteome Project. Journal of Proteome Research. 14: 3710-9. PMID 26272709 DOI: 10.1021/acs.jproteome.5b00541  0.8
2015 Sethi MK, Kim H, Park CK, Baker MS, Paik YK, Packer NH, Hancock WS, Fanayan S, Thaysen-Andersen M. In-depth N-glycome profiling of paired colorectal cancer and non-tumorigenic tissues reveals cancer-, stage- and EGFR-specific protein N-glycosylation. Glycobiology. PMID 26085185 DOI: 10.1093/glycob/cwv042  0.32
2015 Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, ... ... Hancock WS, et al. Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. Journal of Proteome Research. PMID 26076068 DOI: 10.1021/pr5013009  0.8
2015 Sethi MK, Thaysen-Andersen M, Kim H, Park CK, Baker MS, Packer NH, Paik YK, Hancock WS, Fanayan S. Quantitative proteomic analysis of paired colorectal cancer and non-tumorigenic tissues reveals signature proteins and perturbed pathways involved in CRC progression and metastasis. Journal of Proteomics. PMID 26054784 DOI: 10.1016/j.jprot.2015.05.037  0.8
2015 Gbormittah FO, Bones J, Hincapie M, Tousi F, Hancock WS, Iliopoulos O. Clusterin glycopeptide variant characterization reveals significant site-specific glycan changes in the plasma of clear cell renal cell carcinoma. Journal of Proteome Research. 14: 2425-36. PMID 25855029 DOI: 10.1021/pr501104j  0.8
2015 Nilsson CL, Mostovenko E, Lichti CF, Ruggles K, Fenyö D, Rosenbloom KR, Hancock WS, Paik YK, Omenn GS, LaBaer J, Kroes RA, Uhlén M, Hober S, Végvári Á, Andrén PE, et al. Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome. Journal of Proteome Research. 14: 603-8. PMID 25369122 DOI: 10.1021/pr500564q  0.32
2014 Gbormittah FO, Hincapie M, Hancock WS. Development of an improved fractionation of the human plasma proteome by a combination of abundant proteins depletion and multi-lectin affinity chromatography. Bioanalysis. 6: 2537-48. PMID 25411697 DOI: 10.4155/bio.14.217  0.8
2014 Zhang AF, Wu SL, Jung Y, Qin S, Hancock WS, Kreidberg JA. Identification of novel glycans with disialylated structures in α3 integrin from mouse kidney cells with the phenotype of polycystic kidney disease. Journal of Proteome Research. 13: 4901-9. PMID 25300029 DOI: 10.1021/pr5009702  0.8
2014 Lee LY, Thaysen-Andersen M, Baker MS, Packer NH, Hancock WS, Fanayan S. Comprehensive N-glycome profiling of cultured human epithelial breast cells identifies unique secretome N-glycosylation signatures enabling tumorigenic subtype classification. Journal of Proteome Research. 13: 4783-95. PMID 25210975 DOI: 10.1021/pr500331m  0.8
2014 Gbormittah FO, Lee LY, Taylor K, Hancock WS, Iliopoulos O. Comparative studies of the proteome, glycoproteome, and N-glycome of clear cell renal cell carcinoma plasma before and after curative nephrectomy. Journal of Proteome Research. 13: 4889-900. PMID 25184692 DOI: 10.1021/pr500591e  0.8
2014 Lee MJ, Na K, Jeong SK, Lim JS, Kim SA, Lee MJ, Song SY, Kim H, Hancock WS, Paik YK. Identification of human complement factor B as a novel biomarker candidate for pancreatic ductal adenocarcinoma. Journal of Proteome Research. 13: 4878-88. PMID 25057901 DOI: 10.1021/pr5002719  0.8
2014 Pinto SM, Manda SS, Kim MS, Taylor K, Selvan LD, Balakrishnan L, Subbannayya T, Yan F, Prasad TS, Gowda H, Lee C, Hancock WS, Pandey A. Functional annotation of proteome encoded by human chromosome 22. Journal of Proteome Research. 13: 2749-60. PMID 24669763 DOI: 10.1021/pr401169d  0.8
2014 Lee HJ, Cha HJ, Lim JS, Lee SH, Song SY, Kim H, Hancock WS, Yoo JS, Paik YK. Abundance-ratio-based semiquantitative analysis of site-specific N-linked glycopeptides present in the plasma of hepatocellular carcinoma patients. Journal of Proteome Research. 13: 2328-38. PMID 24628331 DOI: 10.1021/pr4011519  0.8
2014 Paik YK, Omenn GS, Thongboonkerd V, Marko-Varga G, Hancock WS. Genome-wide proteomics, Chromosome-Centric Human Proteome Project (C-HPP), part II. Journal of Proteome Research. 13: 1-4. PMID 24328071 DOI: 10.1021/pr4011958  0.8
2014 Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S. Protannotator: a semiautomated pipeline for chromosome-wise functional annotation of the "missing" human proteome. Journal of Proteome Research. 13: 76-83. PMID 24313344 DOI: 10.1021/pr400794x  0.8
2014 Gbormittah FO, Haab BB, Partyka K, Garcia-Ott C, Hancapie M, Hancock WS. Characterization of glycoproteins in pancreatic cyst fluid using a high-performance multiple lectin affinity chromatography platform. Journal of Proteome Research. 13: 289-99. PMID 24303806 DOI: 10.1021/pr400813u  0.8
2014 Sethi MK, Thaysen-Andersen M, Smith JT, Baker MS, Packer NH, Hancock WS, Fanayan S. Comparative N-glycan profiling of colorectal cancer cell lines reveals unique bisecting GlcNAc and α-2,3-linked sialic acid determinants are associated with membrane proteins of the more metastatic/aggressive cell lines. Journal of Proteome Research. 13: 277-88. PMID 24295106 DOI: 10.1021/pr400861m  0.8
2014 Menon R, Im H, Zhang EY, Wu SL, Chen R, Snyder M, Hancock WS, Omenn GS. Distinct splice variants and pathway enrichment in the cell-line models of aggressive human breast cancer subtypes. Journal of Proteome Research. 13: 212-27. PMID 24111759 DOI: 10.1021/pr400773v  0.68
2013 Tousi F, Bones J, Hancock WS, Hincapie M. Differential chemical derivatization integrated with chromatographic separation for analysis of isomeric sialylated N-glycans: a nano-hydrophilic interaction liquid chromatography-MS platform. Analytical Chemistry. 85: 8421-8. PMID 23901877 DOI: 10.1021/ac4018007  0.8
2013 Zhang EY, Cristofanilli M, Robertson F, Reuben JM, Mu Z, Beavis RC, Im H, Snyder M, Hofree M, Ideker T, Omenn GS, Fanayan S, Jeong SK, Paik YK, Zhang AF, ... ... Hancock WS, et al. Genome wide proteomics of ERBB2 and EGFR and other oncogenic pathways in inflammatory breast cancer. Journal of Proteome Research. 12: 2805-17. PMID 23647160 DOI: 10.1021/pr4001527  0.8
2013 Wu SL, Taylor AD, Lu Q, Hanash SM, Im H, Snyder M, Hancock WS. Identification of potential glycan cancer markers with sialic acid attached to sialic acid and up-regulated fucosylated galactose structures in epidermal growth factor receptor secreted from A431 cell line. Molecular & Cellular Proteomics : McP. 12: 1239-49. PMID 23371026 DOI: 10.1074/mcp.M112.024554  0.8
2013 Lee HJ, Jeong SK, Na K, Lee MJ, Lee SH, Lim JS, Cha HJ, Cho JY, Kwon JY, Kim H, Song SY, Yoo JS, Park YM, Kim H, Hancock WS, et al. Comprehensive genome-wide proteomic analysis of human placental tissue for the Chromosome-Centric Human Proteome Project. Journal of Proteome Research. 12: 2458-66. PMID 23362793 DOI: 10.1021/pr301040g  0.32
2013 Kim KY, Joo HJ, Kwon HW, Kim H, Hancock WS, Paik YK. Development of a method to quantitate nematode pheromone for study of small-molecule metabolism in Caenorhabditis elegans. Analytical Chemistry. 85: 2681-8. PMID 23347231 DOI: 10.1021/ac4001964  0.8
2013 Kwon KH, Kim JY, Kim SY, Min HK, Lee HJ, Ji IJ, Kang T, Park GW, An HJ, Lee B, Ravid R, Ferrer I, Chung CK, Paik YK, Hancock WS, et al. Chromosome 11-centric human proteome analysis of human brain hippocampus tissue. Journal of Proteome Research. 12: 97-105. PMID 23286719 DOI: 10.1021/pr3008368  0.8
2013 Cao Z, Partyka K, McDonald M, Brouhard E, Hincapie M, Brand RE, Hancock WS, Haab BB. Modulation of glycan detection on specific glycoproteins by lectin multimerization. Analytical Chemistry. 85: 1689-98. PMID 23286506 DOI: 10.1021/ac302826a  0.8
2013 Liu S, Im H, Bairoch A, Cristofanilli M, Chen R, Deutsch EW, Dalton S, Fenyo D, Fanayan S, Gates C, Gaudet P, Hincapie M, Hanash S, Kim H, Jeong SK, ... ... Hancock WS, et al. A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17. Journal of Proteome Research. 12: 45-57. PMID 23259914 DOI: 10.1021/pr300985j  0.8
2013 Marko-Varga G, Omenn GS, Paik YK, Hancock WS. A first step toward completion of a genome-wide characterization of the human proteome. Journal of Proteome Research. 12: 1-5. PMID 23256439 DOI: 10.1021/pr301183a  0.32
2013 Jeong SK, Lee HJ, Na K, Cho JY, Lee MJ, Kwon JY, Kim H, Park YM, Yoo JS, Hancock WS, Paik YK. GenomewidePDB, a proteomic database exploring the comprehensive protein parts list and transcriptome landscape in human chromosomes. Journal of Proteome Research. 12: 106-11. PMID 23252913 DOI: 10.1021/pr3009447  0.32
2013 Fanayan S, Smith JT, Sethi MK, Cantor D, Goode R, Simpson RJ, Baker MS, Hancock WS, Nice E. Chromosome 7-centric analysis of proteomics data from a panel of human colon carcinoma cell lines. Journal of Proteome Research. 12: 89-96. PMID 23244008 DOI: 10.1021/pr300906y  0.8
2013 Goode RJ, Yu S, Kannan A, Christiansen JH, Beitz A, Hancock WS, Nice E, Smith AI. The proteome browser web portal. Journal of Proteome Research. 12: 172-8. PMID 23215242 DOI: 10.1021/pr3010056  0.8
2012 Paik YK, Hancock WS. Uniting ENCODE with genome-wide proteomics. Nature Biotechnology. 30: 1065-7. PMID 23138303 DOI: 10.1038/nbt.2416  0.32
2012 Lee LY, Hincapie M, Packer N, Baker MS, Hancock WS, Fanayan S. An optimized approach for enrichment of glycoproteins from cell culture lysates using native multi-lectin affinity chromatography. Journal of Separation Science. 35: 2445-52. PMID 22997032 DOI: 10.1002/jssc.201200049  0.8
2012 Tousi F, Bones J, Iliopoulos O, Hancock WS, Hincapie M. Multidimensional liquid chromatography platform for profiling alterations of clusterin N-glycosylation in the plasma of patients with renal cell carcinoma. Journal of Chromatography. A. 1256: 121-8. PMID 22885037 DOI: 10.1016/j.chroma.2012.07.066  0.8
2012 Tep S, Hincapie M, Hancock WS. The characterization and quantitation of glycomic changes in CHO cells during a bioreactor campaign. Biotechnology and Bioengineering. 109: 3007-17. PMID 22752974 DOI: 10.1002/bit.24590  0.8
2012 Fanayan S, Hincapie M, Hancock WS. Using lectins to harvest the plasma/serum glycoproteome. Electrophoresis. 33: 1746-54. PMID 22740463 DOI: 10.1002/elps.201100567  0.8
2012 Vickers DA, Kulik M, Hincapie M, Hancock WS, Dalton S, Murthy SK. Lectin-functionalized microchannels for characterizing pluripotent cells and early differentiation. Biomicrofluidics. 6: 24122-2412210. PMID 22712033 DOI: 10.1063/1.4719979  0.8
2012 Carlage T, Kshirsagar R, Zang L, Janakiraman V, Hincapie M, Lyubarskaya Y, Weiskopf A, Hancock WS. Analysis of dynamic changes in the proteome of a Bcl-XL overexpressing Chinese hamster ovary cell culture during exponential and stationary phases. Biotechnology Progress. 28: 814-23. PMID 22556165 DOI: 10.1002/btpr.1534  0.8
2012 Paik YK, Omenn GS, Uhlen M, Hanash S, Marko-Varga G, Aebersold R, Bairoch A, Yamamoto T, Legrain P, Lee HJ, Na K, Jeong SK, He F, Binz PA, Nishimura T, ... ... Hancock WS, et al. Standard guidelines for the chromosome-centric human proteome project. Journal of Proteome Research. 11: 2005-13. PMID 22443261 DOI: 10.1021/pr200824a  0.8
2012 Paik YK, Jeong SK, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee HJ, Na K, Choi EY, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, ... ... Hancock WS, et al. The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nature Biotechnology. 30: 221-3. PMID 22398612 DOI: 10.1038/nbt.2152  0.8
2012 Lu Q, Padler-Karavani V, Yu H, Chen X, Wu SL, Varki A, Hancock WS. LC-MS analysis of polyclonal human anti-Neu5Gc xeno-autoantibodies immunoglobulin G Subclass and partial sequence using multistep intravenous immunoglobulin affinity purification and multienzymatic digestion. Analytical Chemistry. 84: 2761-8. PMID 22390546 DOI: 10.1021/ac2030893  0.68
2012 Tep S, Hincapie M, Hancock WS. A general approach for the purification and quantitative glycomic analysis of human plasma. Analytical and Bioanalytical Chemistry. 402: 2687-700. PMID 22274286 DOI: 10.1007/s00216-012-5712-5  0.8
2012 Tep S, Hincapie M, Hancock WS. A MALDI-TOF MS method for the simultaneous and quantitative analysis of neutral and sialylated glycans of CHO-expressed glycoproteins. Carbohydrate Research. 347: 121-9. PMID 22138464 DOI: 10.1016/j.carres.2011.10.005  0.8
2012 Rafalko A, Dai S, Hancock WS, Karger BL, Hincapie M. Development of a Chip/Chip/SRM platform using digital chip isoelectric focusing and LC-Chip mass spectrometry for enrichment and quantitation of low abundance protein biomarkers in human plasma. Journal of Proteome Research. 11: 808-17. PMID 22098410 DOI: 10.1021/pr2006704  0.8
2012 Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, et al. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics. 12: 11-20. PMID 22069307 DOI: 10.1002/pmic.201100562  0.8
2011 Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, et al. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics. Clinical Applications. 5: 580-9. PMID 22213554 DOI: 10.1002/prca.201100097  0.8
2011 Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers CH, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, et al. The human proteome project: current state and future direction. Molecular & Cellular Proteomics : McP. 10: M111.009993. PMID 21742803 DOI: 10.1074/mcp.M111.009993  0.8
2011 Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers C, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, et al. The human proteome project: Current state and future direction. Molecular & Cellular Proteomics : McP. PMID 21531903 DOI: 10.1074/mcp.O111.009993  0.32
2011 Zeng Z, Hincapie M, Pitteri SJ, Hanash S, Schalkwijk J, Hogan JM, Wang H, Hancock WS. A proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and isoelectric focusing to study the breast cancer proteome. Analytical Chemistry. 83: 4845-54. PMID 21513341 DOI: 10.1021/ac2002802  0.8
2011 Vickers DA, Hincapie M, Hancock WS, Murthy SK. Lectin-mediated microfluidic capture and release of leukemic lymphocytes from whole blood. Biomedical Microdevices. 13: 565-71. PMID 21455756 DOI: 10.1007/s10544-011-9527-5  0.8
2011 Wang Y, Lu Q, Wu SL, Karger BL, Hancock WS. Characterization and comparison of disulfide linkages and scrambling patterns in therapeutic monoclonal antibodies: using LC-MS with electron transfer dissociation. Analytical Chemistry. 83: 3133-40. PMID 21428412 DOI: 10.1021/ac200128d  0.8
2011 Dorai H, Santiago A, Campbell M, Tang QM, Lewis MJ, Wang Y, Lu QZ, Wu SL, Hancock W. Characterization of the proteases involved in the N-terminal clipping of glucagon-like-peptide-1-antibody fusion proteins. Biotechnology Progress. 27: 220-31. PMID 21312369 DOI: 10.1002/btpr.537  0.68
2011 Hancock W, Omenn G, Legrain P, Paik YK. Proteomics, human proteome project, and chromosomes. Journal of Proteome Research. 10: 210. PMID 21114295 DOI: 10.1021/pr101099h  0.32
2011 Murugesan N, Macdonald JA, Lu Q, Wu SL, Hancock WS, Pachter JS. Analysis of mouse brain microvascular endothelium using laser capture microdissection coupled with proteomics. Methods in Molecular Biology (Clifton, N.J.). 686: 297-311. PMID 21082378  0.8
2010 Rafalko A, Iliopoulos O, Fusaro VA, Hancock W, Hincapie M. Immunoaffinity enrichment and liquid chromatography-selected reaction monitoring mass spectrometry for quantitation of carbonic anhydrase 12 in cultured renal carcinoma cells. Analytical Chemistry. 82: 8998-9005. PMID 20936840 DOI: 10.1021/ac101981t  0.8
2010 Mischak H, Allmaier G, Apweiler R, Attwood T, Baumann M, Benigni A, Bennett SE, Bischoff R, Bongcam-Rudloff E, Capasso G, Coon JJ, D'Haese P, Dominiczak AF, Dakna M, Dihazi H, ... ... Hancock WS, et al. Recommendations for biomarker identification and qualification in clinical proteomics. Science Translational Medicine. 2: 46ps42. PMID 20739680 DOI: 10.1126/scitranslmed.3001249  0.8
2010 Lee A, Nakano M, Hincapie M, Kolarich D, Baker MS, Hancock WS, Packer NH. The lectin riddle: Glycoproteins fractionated from complex mixtures have similar glycomic profiles Omics a Journal of Integrative Biology. 14: 487-499. PMID 20726804 DOI: 10.1089/omi.2010.0075  0.8
2010 Jiang H, Wu SL, Karger BL, Hancock WS. Characterization of the glycosylation occupancy and the active site in the follow-on protein therapeutic: TNK-tissue plasminogen activator. Analytical Chemistry. 82: 6154-62. PMID 20552988 DOI: 10.1021/ac100956x  0.8
2010 Wu SL, Jiang H, Hancock WS, Karger BL. Identification of the unpaired cysteine status and complete mapping of the 17 disulfides of recombinant tissue plasminogen activator using LC-MS with electron transfer dissociation/collision induced dissociation. Analytical Chemistry. 82: 5296-303. PMID 20481521 DOI: 10.1021/ac100766r  0.8
2010 Kullolli M, Hancock WS, Hincapie M. Automated platform for fractionation of human plasma glycoproteome in clinical proteomics. Analytical Chemistry. 82: 115-20. PMID 19957969 DOI: 10.1021/ac9013308  0.8
2010 Zeng Z, Hincapie M, Haab BB, Hanash S, Pitteri SJ, Kluck S, Hogan JM, Kennedy J, Hancock WS. The development of an integrated platform to identify breast cancer glycoproteome changes in human serum. Journal of Chromatography. A. 1217: 3307-15. PMID 19782370 DOI: 10.1016/j.chroma.2009.09.029  0.8
2009 Lu Q, Zheng X, McIntosh T, Davis H, Nemeth JF, Pendley C, Wu SL, Hancock WS. Development of different analysis platforms with LC-MS for pharmacokinetic studies of protein drugs. Analytical Chemistry. 81: 8715-23. PMID 19788250 DOI: 10.1021/ac901991x  0.8
2009 Akella LM, Rejtar T, Orazine C, Hincapie M, Hancock WS. CLUE-TIPS, clustering methods for pattern analysis of LC-MS data. Journal of Proteome Research. 8: 4732-42. PMID 19725534 DOI: 10.1021/pr900427q  0.8
2009 Carlage T, Hincapie M, Zang L, Lyubarskaya Y, Madden H, Mhatre R, Hancock WS. Proteomic profiling of a high-producing Chinese hamster ovary cell culture. Analytical Chemistry. 81: 7357-62. PMID 19663468 DOI: 10.1021/ac900792z  0.8
2009 Taylor AD, Hancock WS, Hincapie M, Taniguchi N, Hanash SM. Towards an integrated proteomic and glycomic approach to finding cancer biomarkers. Genome Medicine. 1: 57. PMID 19519948 DOI: 10.1186/gm57  0.8
2009 Jiang H, Wu SL, Karger BL, Hancock WS. Mass spectrometric analysis of innovator, counterfeit, and follow-on recombinant human growth hormone. Biotechnology Progress. 25: 207-18. PMID 19224592 DOI: 10.1002/btpr.72  0.8
2009 Zheng X, Wu SL, Hincapie M, Hancock WS. Study of the human plasma proteome of rheumatoid arthritis. Journal of Chromatography. A. 1216: 3538-45. PMID 19215933 DOI: 10.1016/j.chroma.2009.01.063  0.8
2009 Taniguchi N, Hancock W, Lubman DM, Rudd PM. The second golden age of glycomics: from functional glycomics to clinical applications. Journal of Proteome Research. 8: 425-6. PMID 19133724 DOI: 10.1021/pr801057j  0.8
2009 Wu SL, Jiang H, Lu Q, Dai S, Hancock WS, Karger BL. Mass spectrometric determination of disulfide linkages in recombinant therapeutic proteins using online LC-MS with electron-transfer dissociation. Analytical Chemistry. 81: 112-22. PMID 19117448 DOI: 10.1021/ac801560k  0.8
2008 Plavina T, Hincapie M, Wakshull E, Subramanyam M, Hancock WS. Increased plasma concentrations of cytoskeletal and Ca2+-binding proteins and their peptides in psoriasis patients. Clinical Chemistry. 54: 1805-14. PMID 18801941 DOI: 10.1373/clinchem.2008.103770  0.72
2008 Kullolli M, Hancock WS, Hincapie M. Preparation of a high-performance multi-lectin affinity chromatography (HP-M-LAC) adsorbent for the analysis of human plasma glycoproteins. Journal of Separation Science. 31: 2733-9. PMID 18693314 DOI: 10.1002/jssc.200800233  0.8
2008 Lu Q, Murugesan N, Macdonald JA, Wu SL, Pachter JS, Hancock WS. Analysis of mouse brain microvascular endothelium using immuno-laser capture microdissection coupled to a hybrid linear ion trap with Fourier transform-mass spectrometry proteomics platform Electrophoresis. 29: 2689-2695. PMID 18481836 DOI: 10.1002/elps.200700936  0.8
2008 Orazine CI, Hincapie M, Hancock WS, Hattersley M, Hanke JH. A proteomic analysis of the plasma glycoproteins of a MCF-7 mouse xenograft: a model system for the detection of tumor markers. Journal of Proteome Research. 7: 1542-54. PMID 18336003 DOI: 10.1021/pr7008516  0.8
2008 Dayarathna MK, Hancock WS, Hincapie M. A two step fractionation approach for plasma proteomics using immunodepletion of abundant proteins and multi-lectin affinity chromatography: Application to the analysis of obesity, diabetes, and hypertension diseases. Journal of Separation Science. 31: 1156-66. PMID 18306431 DOI: 10.1002/jssc.200700271  0.8
2008 Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, ... ... Hancock WS, et al. Human Proteinpedia enables sharing of human protein data. Nature Biotechnology. 26: 164-7. PMID 18259167 DOI: 10.1038/nbt0208-164  0.8
2007 Gu Y, Wu SL, Meyer JL, Hancock WS, Burg LJ, Linder J, Hanlon DW, Karger BL. Proteomic analysis of high-grade dysplastic cervical cells obtained from ThinPrep slides using laser capture microdissection and mass spectrometry. Journal of Proteome Research. 6: 4256-68. PMID 17902640 DOI: 10.1021/pr070319j  0.8
2007 Plavina T, Wakshull E, Hancock WS, Hincapie M. Combination of abundant protein depletion and multi-lectin affinity chromatography (M-LAC) for plasma protein biomarker discovery. Journal of Proteome Research. 6: 662-71. PMID 17269723 DOI: 10.1021/pr060413k  0.8
2006 Wang Y, Dai Z, Sadee W, Hancock WS. A pharmacoproteomics study of the cancer cell line EKVX using capillary-LC/MS/MS. Molecular Pharmaceutics. 3: 566-78. PMID 17009856 DOI: 10.1021/mp060002b  0.8
2006 Zheng X, Wu SL, Hancock WS. Glycation of interferon-beta-1b and human serum albumin in a lyophilized glucose formulation. Part III: application of proteomic analysis to the manufacture of biological drugs. International Journal of Pharmaceutics. 322: 136-45. PMID 16920285 DOI: 10.1016/j.ijpharm.2006.06.038  0.68
2006 Wang Y, Wu SL, Hancock WS. Monitoring of glycoprotein products in cell culture lysates using lectin affinity chromatography and capillary HPLC coupled to electrospray linear ion trap-Fourier transform mass spectrometry (LTQ/FTMS). Biotechnology Progress. 22: 873-80. PMID 16739974 DOI: 10.1021/bp060005l  0.68
2006 Wang Y, Wu SL, Hancock WS. Approaches to the study of N-linked glycoproteins in human plasma using lectin affinity chromatography and nano-HPLC coupled to electrospray linear ion trap--Fourier transform mass spectrometry. Glycobiology. 16: 514-23. PMID 16497783 DOI: 10.1093/glycob/cwj091  0.68
2005 Wang Y, Wu SL, Hancock WS, Trala R, Kessler M, Taylor AH, Patel PS, Aon JC. Proteomic profiling of Escherichia coli proteins under high cell density fed-batch cultivation with overexpression of phosphogluconolactonase. Biotechnology Progress. 21: 1401-11. PMID 16209543 DOI: 10.1021/bp050048m  0.68
2005 Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, ... ... Hancock WS, et al. A functional annotation of subproteomes in human plasma. Proteomics. 5: 3506-19. PMID 16104058 DOI: 10.1002/pmic.200500140  0.8
2005 Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, ... ... Hancock WS, et al. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 5: 3226-45. PMID 16104056 DOI: 10.1002/pmic.200500358  0.8
2005 Wu SL, Kim J, Hancock WS, Karger B. Extended Range Proteomic Analysis (ERPA): a new and sensitive LC-MS platform for high sequence coverage of complex proteins with extensive post-translational modifications-comprehensive analysis of beta-casein and epidermal growth factor receptor (EGFR). Journal of Proteome Research. 4: 1155-70. PMID 16083266 DOI: 10.1021/pr050113n  0.8
2004 Wu SL, Jardine I, Hancock WS, Karger BL. A new and sensitive on-line liquid chromatography/mass spectrometric approach for top-down protein analysis: the comprehensive analysis of human growth hormone in an E. coli lysate using a hybrid linear ion trap/Fourier transform ion cyclotron resonance mass spectrometer. Rapid Communications in Mass Spectrometry : Rcm. 18: 2201-7. PMID 15384137 DOI: 10.1002/rcm.1609  0.8
2004 Zang L, Palmer Toy D, Hancock WS, Sgroi DC, Karger BL. Proteomic analysis of ductal carcinoma of the breast using laser capture microdissection, LC-MS, and 16O/18O isotopic labeling. Journal of Proteome Research. 3: 604-12. PMID 15253443 DOI: 10.1021/pr034131l  0.8
2003 Wu SL, Choudhary G, Ramström M, Bergquist J, Hancock WS. Evaluation of shotgun sequencing for proteomic analysis of human plasma using HPLC coupled with either ion trap or Fourier transform mass spectrometry Journal of Proteome Research. 2: 383-393. PMID 12938928 DOI: 10.1021/pr034015i  0.8
2003 Wu SL, Hancock WS, Goodrich GG, Kunitake ST. An approach to the proteomic analysis of a breast cancer cell line (SKBR-3). Proteomics. 3: 1037-46. PMID 12833528 DOI: 10.1002/pmic.200300382  0.68
2003 Choudhary G, Wu SL, Shieh P, Hancock WS. Multiple enzymatic digestion for enhanced sequence coverage of proteins in complex proteomic mixtures using capillary LC with ion trap MS/MS. Journal of Proteome Research. 2: 59-67. PMID 12643544 DOI: 10.1021/pr025557n  0.8
2002 Wu SL, Amato H, Biringer R, Choudhary G, Shieh P, Hancock WS. Targeted proteomics of low-level proteins in human plasma by LC/MSn: using human growth hormone as a model system. Journal of Proteome Research. 1: 459-65. PMID 12645918 DOI: 10.1021/pr025537l  0.8
2002 Hancock WS, Wu SL, Stanley RR, Gombocz EA. Publishing large proteome datasets: scientific policy meets emerging technologies. Trends in Biotechnology. 20: S39-44. PMID 12570159  0.68
2002 Hancock WS, Wu SL, Shieh P. The challenges of developing a sound proteomics strategy. Proteomics. 2: 352-9. PMID 12164694 DOI: 10.1002/1615-9861(200204)2:4<352::AID-PROT352>3.0.CO;2-U  0.68
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