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Giovanna Ghirlanda - Publications

Arizona State University, Tempe, AZ, United States 

47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Korendovych IV, Ghirlanda G. Editorial overview: The many facets of protein design: from self-assembled materials to vaccines. Current Opinion in Structural Biology. 51: iv-vi. PMID 30401427 DOI: 10.1016/J.Sbi.2018.10.004  0.88
2016 Woodrum BW, Maxwell J, Allen DM, Wilson J, Krumpe LR, Bobkov AA, Hill RB, Kibler KV, O'Keefe BR, Ghirlanda G. A Designed "Nested" Dimer of Cyanovirin-N Increases Antiviral Activity. Viruses. 8. PMID 27275831 DOI: 10.3390/v8060158  1
2015 Li Z, Bolia A, Maxwell JD, Bobkov AA, Ghirlanda G, Ozkan SB, Margulis CJ. A Rigid Hinge Region Is Necessary for High-Affinity Binding of Dimannose to Cyanovirin and Associated Constructs. Biochemistry. PMID 26507789 DOI: 10.1021/Acs.Biochem.5B00635  1
2015 Olson TL, Espiritu E, Edwardraja S, Simmons C, Williams JC, Ghirlanda G, Allen JP. Design of dinuclear manganese cofactors for bacterial reaction centers. Biochimica Et Biophysica Acta. PMID 26392146 DOI: 10.1016/j.bbabio.2015.09.003  1
2015 Sommer DJ, Vaughn MD, Clark BC, Tomlin J, Roy A, Ghirlanda G. Reengineering cyt b562 for hydrogen production: A facile route to artificial hydrogenases. Biochimica Et Biophysica Acta. PMID 26375327 DOI: 10.1016/j.bbabio.2015.09.001  1
2015 Sizemore SM, Cope SM, Roy A, Ghirlanda G, Vaiana SM. Slow Internal Dynamics and Charge Expansion in the Disordered Protein CGRP: A Comparison with Amylin. Biophysical Journal. 109: 1038-48. PMID 26331261 DOI: 10.1016/j.bpj.2015.07.023  1
2015 Flores M, Olson TL, Wang D, Edwardraja S, Shinde S, Williams JC, Ghirlanda G, Allen JP. The Copper Environment in Artificial Metalloproteins Probed by EPR Spectroscopy. The Journal of Physical Chemistry. B. PMID 26201933 DOI: 10.1021/acs.jpcb.5b04172  1
2015 Sommer DJ, Roy A, Astashkin A, Ghirlanda G. Modulation of Cluster Incorporation Specificity in a De Novo Iron-Sulfur Cluster Binding Peptide. Biopolymers. PMID 25808361 DOI: 10.1002/bip.22635  1
2014 Flory JD, Johnson T, Simmons CR, Lin S, Ghirlanda G, Fromme P. Purification and assembly of thermostable Cy5 labeled γ-PNAs into a 3D DNA nanocage. Artificial Dna, Pna & Xna. 5: 1-8. PMID 25760314 DOI: 10.4161/1949095X.2014.992181  1
2014 Roy A, Sommer DJ, Schmitz RA, Brown CL, Gust D, Astashkin A, Ghirlanda G. A de novo designed 2[4Fe-4S] ferredoxin mimic mediates electron transfer. Journal of the American Chemical Society. 136: 17343-9. PMID 25437708 DOI: 10.1021/ja510621e  1
2014 Shinde S, Binder JK, Goyal B, Woodrum B, De Munari S, Levitus M, Ghirlanda G. A designed buried salt bridge modulates heterodimerization of a membrane peptide. Biopolymers. 102: 437-43. PMID 25250823 DOI: 10.1002/bip.22564  1
2014 Sommer DJ, Vaughn MD, Ghirlanda G. Protein secondary-shell interactions enhance the photoinduced hydrogen production of cobalt protoporphyrin IX. Chemical Communications (Cambridge, England). 50: 15852-5. PMID 25233853 DOI: 10.1039/c4cc06700b  1
2014 Wang D, Ghirlanda G, Allen JP. Water oxidation by a nickel-glycine catalyst. Journal of the American Chemical Society. 136: 10198-201. PMID 24992489 DOI: 10.1021/ja504282w  1
2014 Flory JD, Simmons CR, Lin S, Johnson T, Andreoni A, Zook J, Ghirlanda G, Liu Y, Yan H, Fromme P. Low temperature assembly of functional 3D DNA-PNA-protein complexes. Journal of the American Chemical Society. 136: 8283-95. PMID 24871902 DOI: 10.1021/Ja501228C  1
2014 Bolia A, Woodrum BW, Cereda A, Ruben MA, Wang X, Ozkan SB, Ghirlanda G. A flexible docking scheme efficiently captures the energetics of glycan-cyanovirin binding Biophysical Journal. 106: 1142-1151. PMID 24606938 DOI: 10.1016/j.bpj.2014.01.040  1
2013 Faiella M, Roy A, Sommer D, Ghirlanda G. De novo design of functional proteins: Toward artificial hydrogenases. Biopolymers. 100: 558-71. PMID 24281721 DOI: 10.1002/bip.22420  1
2013 Cope SM, Shinde S, Best RB, Ghirlanda G, Vaiana SM. Cyclic N-terminal loop of amylin forms non amyloid fibers. Biophysical Journal. 105: 1661-9. PMID 24094407 DOI: 10.1016/j.bpj.2013.08.026  1
2013 Roy A, Sarrou I, Vaughn MD, Astashkin AV, Ghirlanda G. De novo design of an artificial bis[4Fe-4S] binding protein. Biochemistry. 52: 7586-94. PMID 24090184 DOI: 10.1021/bi401199s  1
2013 Ghirlanda G. Computational biology: A recipe for ligand-binding proteins. Nature. 501: 177-8. PMID 24005323 DOI: 10.1038/nature12463  1
2013 Flory JD, Shinde S, Lin S, Liu Y, Yan H, Ghirlanda G, Fromme P. PNA-peptide assembly in a 3D DNA nanocage at room temperature. Journal of the American Chemical Society. 135: 6985-93. PMID 23521013 DOI: 10.1021/Ja400762C  1
2013 Ghirlanda G, Senes A. Preface Methods in Molecular Biology. 1063: V-VI.  1
2012 Roy A, Madden C, Ghirlanda G. Photo-induced hydrogen production in a helical peptide incorporating a [FeFe] hydrogenase active site mimic. Chemical Communications (Cambridge, England). 48: 9816-8. PMID 22895256 DOI: 10.1039/c2cc34470j  1
2012 Shinde S, Cordova JM, Woodrum BW, Ghirlanda G. Modulation of function in a minimalist heme-binding membrane protein. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 17: 557-64. PMID 22307279 DOI: 10.1007/s00775-012-0876-1  1
2011 Halsey CM, Xiong J, Oshokoya OO, Johnson JA, Shinde S, Beatty JT, Ghirlanda G, JiJi RD, Cooley JW. Simultaneous observation of peptide backbone lipid solvation and α-helical structure by deep-UV resonance Raman spectroscopy. Chembiochem : a European Journal of Chemical Biology. 12: 2125-8. PMID 21796753 DOI: 10.1002/cbic.201100433  1
2010 Ghirlanda G, Prins LJ, Scrimin P. Catalysis by Peptide-Based Enzyme Models Amino Acids, Peptides and Proteins in Organic Chemistry. 2: 433-471. DOI: 10.1002/9783527631780.ch10  1
2009 Ghirlanda G. Design of membrane proteins: toward functional systems. Current Opinion in Chemical Biology. 13: 643-51. PMID 19828358 DOI: 10.1016/j.cbpa.2009.09.017  1
2009 Liu Y, Carroll JR, Holt LA, McMahon J, Giomarelli B, Ghirlanda G. Multivalent interactions with gp120 are required for the anti-HIV activity of Cyanovirin. Biopolymers. 92: 194-200. PMID 19235857 DOI: 10.1002/bip.21173  1
2008 Ghirlanda G. Computational biochemistry: old enzymes, new tricks. Nature. 453: 164-6. PMID 18464727 DOI: 10.1038/453164a  1
2008 Fromme R, Katiliene Z, Fromme P, Ghirlanda G. Conformational gating of dimannose binding to the antiviral protein cyanovirin revealed from the crystal structure at 1.35 A resolution. Protein Science : a Publication of the Protein Society. 17: 939-44. PMID 18436959 DOI: 10.1110/Ps.083472808  1
2007 Fromme R, Katiliene Z, Giomarelli B, Bogani F, Mc Mahon J, Mori T, Fromme P, Ghirlanda G. A monovalent mutant of cyanovirin-N provides insight into the role of multiple interactions with gp120 for antiviral activity. Biochemistry. 46: 9199-207. PMID 17636873 DOI: 10.1021/Bi700666M  1
2007 Cordova JM, Noack PL, Hilcove SA, Lear JD, Ghirlanda G. Design of a functional membrane protein by engineering a heme-binding site in glycophorin A. Journal of the American Chemical Society. 129: 512-8. PMID 17227013 DOI: 10.1021/ja057495i  1
2006 Bogani F, McConnell E, Joshi L, Chang Y, Ghirlanda G. A designed glycoprotein analogue of Gc-MAF exhibits native-like phagocytic activity. Journal of the American Chemical Society. 128: 7142-3. PMID 16734450 DOI: 10.1021/ja0604212  1
2004 Ghirlanda G, Hilcove SA, Pidikiti R, Johansson JS, Lear JD, Degrado WF, Eckenhoff RG. Volatile anesthetic modulation of oligomerization equilibria in a hexameric model peptide. Febs Letters. 578: 140-4. PMID 15581631 DOI: 10.1016/J.Febslet.2004.10.087  1
2004 Ghirlanda G, Osyczka A, Liu W, Antolovich M, Smith KM, Dutton PL, Wand AJ, DeGrado WF. De novo design of a D2-symmetrical protein that reproduces the diheme four-helix bundle in cytochrome bc1. Journal of the American Chemical Society. 126: 8141-7. PMID 15225055 DOI: 10.1021/Ja039935G  1
2002 Ghirlanda G, Lear JD, Ogihara NL, Eisenberg D, DeGrado WF. A hierarchic approach to the design of hexameric helical barrels. Journal of Molecular Biology. 319: 243-53. PMID 12051949 DOI: 10.1016/S0022-2836(02)00233-4  1
2001 Tang Y, Ghirlanda G, Petka WA, Nakajima T, DeGrado WF, Tirrell DA. Fluorinated Coiled-Coil Proteins Prepared In Vivo Display Enhanced Thermal and Chemical Stability. Angewandte Chemie (International Ed. in English). 40: 1494-1496. PMID 29712367 DOI: 10.1002/1521-3773(20010417)40:8<1494::Aid-Anie1494>3.0.Co;2-X  0.52
2001 North B, Summa CM, Ghirlanda G, DeGrado WF. D(n)-symmetrical tertiary templates for the design of tubular proteins. Journal of Molecular Biology. 311: 1081-90. PMID 11531341 DOI: 10.1006/Jmbi.2001.4900  1
2001 Tang Y, Ghirlanda G, Petka WA, Nakajima T, DeGrado WF, Tirrell DA. Fluorinated Coiled-Coil Proteins Prepared In Vivo Display Enhanced Thermal and Chemical Stability This work was supported by a grant from the U.S. Army Research Office. Y. Tang is supported by a Whitaker Graduate Research Fellowship. We thank Dr. Gary Hathaway for performing matrix-assisted laser desorption/ionization analyses. Angewandte Chemie (International Ed. in English). 40: 1494-1496. PMID 11317312 DOI: 10.1002/1521-3773(20010417)40:8<1494::AID-ANIE1494>3.0.CO;2-X  1
2001 Tang Y, Ghirlanda G, Vaidehi N, Kua J, Mainz DT, Goddard III WA, DeGrado WF, Tirrell DA. Stabilization of coiled-coil peptide domains by introduction of trifluoroleucine. Biochemistry. 40: 2790-6. PMID 11258889 DOI: 10.1021/Bi0022588  1
2001 Ogihara NL, Ghirlanda G, Bryson JW, Gingery M, DeGrado WF, Eisenberg D. Design of three-dimensional domain-swapped dimers and fibrous oligomers. Proceedings of the National Academy of Sciences of the United States of America. 98: 1404-9. PMID 11171963 DOI: 10.1073/Pnas.98.4.1404  1
1998 Ghirlanda G, Lear JD, Lombardi A, Degrado WF. From synthetic coiled coils to functional proteins: Automated design of a receptor for the calmodulin-binding domain of calcineurin Journal of Molecular Biology. 281: 379-391. PMID 9698554 DOI: 10.1006/Jmbi.1998.1912  1
1998 Ghirlanda G, Scrimin P, Tecilla P, Toffoletti A. Amphiphilic copper(II) complexes modeled after the metal-complexation subunit of bleomycin antibiotics Langmuir. 14: 1646-1655.  1
1996 Ghirlanda G, Scrimin P, Kaifer AE, Echegoyen LA. Self-assembled monolayers of Cu(II) metallosurfactants on GC and HOPG Langmuir. 12: 3695-3701. DOI: 10.1021/La960052V  1
1996 Ghirlanda G, Scrimin P, Echegoyen LA. Influence of aggregation on redox potentials of amphiphilic Cu(II) complexes modeled after bleomycin antibiotics Langmuir. 12: 5188-5194.  1
1996 Scrimin P, Ghirlanda G, Tecilla P, Moss RA. Comparative reactivities of phosphate ester cleavages by metallomicelles Langmuir. 12: 6235-6241.  1
1995 Moss RA, Park BD, Scrimin P, Ghirlanda G. Lanthanide cleavage of phosphodiester liposomes Journal of the Chemical Society, Chemical Communications. 1627-1628. DOI: 10.1039/C39950001627  1
1993 Ghirlanda G, Scrimin P, Tecilla P, Tonellato U. A hydrolytic reporter of Cu(II) availability in artificial liposomes Journal of Organic Chemistry. 58: 3025-3029.  1
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