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Meera Sitharam - Publications

Affiliations: 
University of Florida, Gainesville, Gainesville, FL, United States 
Area:
Computer Science
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Ozkan A, Sitharam M, Flores-Canales JC, Prabhu R, Kurnikova M. Baseline Comparisons of Complementary Sampling Methods for Assembly Driven by Short-Ranged Pair Potentials toward Fast and Flexible Hybridization. Journal of Chemical Theory and Computation. PMID 33576635 DOI: 10.1021/acs.jctc.0c00945  0.558
2020 Prabhu R, Sitharam M, Ozkan A, Wu R. Atlasing of Assembly Landscapes using Distance Geometry and Graph Rigidity. Journal of Chemical Information and Modeling. PMID 32786706 DOI: 10.1021/Acs.Jcim.0C00763  0.435
2019 Sitharam M, Youngquist J, Nolan M, Peters J. Corner-Sharing Tetrahedra for Modeling Micro-structure. Computer Aided Design. 114: 164-178. PMID 33776067 DOI: 10.1016/J.Cad.2019.05.015  0.387
2018 Sitharam M, Tarifi M, Wang M. Combinatorial rigidity of incidence systems and application to dictionary learning Journal of Symbolic Computation. 88: 21-46. DOI: 10.1016/J.Jsc.2018.02.003  0.388
2016 Sitharam M, Vince A, Wang M, Bóna M. Symmetry in sphere-based assembly configuration spaces Symmetry. 8. DOI: 10.3390/Sym8010005  0.459
2015 Wang M, Sitharam M. Algorithm 951: Cayley analysis of mechanism configuration spaces using caymos: Software functionalities and architecture Acm Transactions On Mathematical Software. 41. DOI: 10.1145/2699462  0.382
2015 Baker T, Sitharam M, Wang M, Willoughby J. Optimal decomposition and recombination of isostatic geometric constraint systems for designing layered materials Computer Aided Geometric Design. 40: 1-25. DOI: 10.1016/J.Cagd.2015.07.001  0.416
2014 Jialong C, Sitharam M. Maxwell-independence: A new rank estimate for the 3-dimensional generic rigidity matroid Journal of Combinatorial Theory. Series B. 105: 26-43. DOI: 10.1016/j.jctb.2013.12.001  0.374
2014 Sitharam M, Wang M. How the Beast really moves: Cayley analysis of mechanism realization spaces using CayMos Cad Computer Aided Design. 46: 205-210. DOI: 10.1016/J.Cad.2013.08.033  0.478
2011 Bóna M, Sitharam M, Vince A. Enumeration of viral capsid assembly pathways: tree orbits under permutation group action. Bulletin of Mathematical Biology. 73: 726-53. PMID 21174231 DOI: 10.1007/S11538-010-9606-4  0.302
2011 Ozkan A, Sitharam M. EASAL (Efficient atlasing, analysis and search of molecular assembly landscapes) 3rd International Conference On Bioinformatics and Computational Biology 2011, Bicob 2011. 233-238.  0.356
2010 Sitharam M, Zhou Y, Peters J, Mitchell JSB. Reconciling conflicting combinatorial preprocessors for geometric constraint systems International Journal of Computational Geometry and Applications. 20: 631-651. DOI: 10.1142/S0218195910003463  0.458
2010 Sitharam M, Peters J, Zhou Y. Optimized parametrization of systems of incidences between rigid bodies Journal of Symbolic Computation. 45: 481-498. DOI: 10.1016/J.Jsc.2010.01.011  0.431
2010 Sitharam M, Gao H. Characterizing graphs with convex and connected cayley configuration spaces Discrete and Computational Geometry. 43: 594-625. DOI: 10.1007/S00454-009-9160-8  0.549
2009 Gao H, Sitharam M. Characterizing 1-dof Henneberg-I graphs with efficient configuration spaces (extended abstract) Proceedings of the Acm Symposium On Applied Computing. 1122-1126. DOI: 10.1145/1529282.1529529  0.443
2009 Haller K, John ALS, Sitharam M, Streinu I, White N. Body-and-cad geometric constraint systems Proceedings of the Acm Symposium On Applied Computing. 1127-1131. DOI: 10.1016/J.Comgeo.2010.06.003  0.322
2009 Cheng J, Sitharam M, Streinu I. Nucleation-free 3D rigidity Proceedings of the 21st Annual Canadian Conference On Computational Geometry, Cccg 2009. 71-74.  0.335
2008 Bóna M, Sitharam M. The influence of symmetry on the probability of assembly pathways for icosahedral viral shells Computational and Mathematical Methods in Medicine. 9: 295-302. DOI: 10.1080/17486700802168411  0.352
2007 Lomonosov A, Sitharam M. Stability, Optimality and Complexity of Network Games with Pricing and Player Dropouts Scalable Computing: Practice and Experience. 8. DOI: 10.12694/Scpe.V8I1.399  0.677
2006 Sitharam M, Agbandje-McKenna M. Modeling virus self-assembly pathways: avoiding dynamics using geometric constraint decomposition. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 1232-65. PMID 16901239 DOI: 10.1089/Cmb.2006.13.1232  0.302
2006 Sitharam M, Arbree A, Zhou Y, Kohareswaran N. Solution space navigation for geometric constraint systems Acm Transactions On Graphics. 25: 194-213. DOI: 10.1145/1138450.1138452  0.351
2006 Sitharam M. Well-formed systems of point incidences for resolving collections of rigid bodies International Journal of Computational Geometry and Applications. 16: 591-615. DOI: 10.1142/S0218195906002208  0.354
2006 Sitharam M, Oung JJ, Zhou Y, Arbree A. Geometric constraints within feature hierarchies Cad Computer Aided Design. 38: 22-38. DOI: 10.1016/J.Cad.2005.05.001  0.422
2004 Hoffmann CM, Sitharam M, Yuan B. Making constraint solvers more usable: Overconstraint problem Cad Computer Aided Design. 36: 377-399. DOI: 10.1016/S0010-4485(03)00099-X  0.372
2004 Lomonosov A, Sitharam M, Park K. Network QoS games: Stability vs optimality tradeoff Journal of Computer and System Sciences. 69: 281-302. DOI: 10.1016/J.Jcss.2004.03.001  0.676
2001 Sitharam M, Straney T. Derandomized learning of boolean functions over finite abelian groups International Journal of Foundations of Computer Science. 12: 491-516. DOI: 10.1142/S0129054101000618  0.368
2001 Hoffman CM, Lomonosov A, Sitharam M. Decomposition Plans for Geometric Constraint Problems, Part II: New Algorithms Journal of Symbolic Computation. 31: 409-427. DOI: 10.1006/Jsco.2000.0403  0.69
2001 Hoffman CM, Lomonosov A, Sitharam M. Decomposition Plans for Geometric Constraint Systems, Part I: Performance Measures for CAD Journal of Symbolic Computation. 31: 367-408. DOI: 10.1006/Jsco.2000.0402  0.704
2000 Sitharam M, Straney T. Sampling Boolean functions over Abelian groups and applications Applicable Algebra in Engineering, Communications and Computing. 11: 89-109. DOI: 10.1007/S002000000038  0.376
2000 Hoffmann CM, Lomonosov A, Sitharam M. Planning geometric constraint decomposition via optimal graph transformations Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 1779: 309-324.  0.39
1998 Riis S, Sitharam M. Uniformly Generated Submodules of Permutation Modules Brics Report Series. 5. DOI: 10.7146/Brics.V5I20.19426  0.371
1998 Anderson B, Jackson J, Sitharam M. Descartes' rule of signs revisited American Mathematical Monthly. 105: 447-451. DOI: 10.1080/00029890.1998.12004907  0.344
1995 Sitharam M. Evaluating spectral norms for constant depth circuits with symmetric gates Computational Complexity. 5: 167-189. DOI: 10.1007/Bf01268144  0.317
1995 Sitharam M. Pseudorandom generators and learning algorithms for AC0 Computational Complexity. 5: 248-266. DOI: 10.1007/Bf01206321  0.309
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