Sabire Ozcan - Related publications

Affiliations: 
University of Kentucky, Lexington, KY 
Area:
Biochemistry
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Lien YC, Lu XM, Won KJ, Wang PZ, Osei-Bonsu W, Simmons RA. The Transcriptome and Epigenome Reveal Novel Changes in Transcription Regulation During Pancreatic Rat Islet Maturation. Endocrinology. PMID 34467975 DOI: 10.1210/endocr/bqab181   
2021 Yang GH, Fontaine DA, Lodh S, Blumer JT, Roopra A, Davis DB. TCF19 Impacts a Network of Inflammatory and DNA Damage Response Genes in the Pancreatic β-Cell. Metabolites. 11. PMID 34436454 DOI: 10.3390/metabo11080513   
2021 Jung BC, Kang S. Epigenetic regulation of inflammatory factors in adipose tissue. Biochimica Et Biophysica Acta. Molecular and Cell Biology of Lipids. 159019. PMID 34332076 DOI: 10.1016/j.bbalip.2021.159019   
2021 Hameed T, Khan Z, Imran M, Ali S, Albegali AA, Ullah MI, Ejaz H. Associations of transcription factor 7-Like 2 () gene polymorphism in patients of type 2 diabetes mellitus from Khyber Pakhtunkhwa population of Pakistan. African Health Sciences. 21: 15-22. PMID 34394276 DOI: 10.4314/ahs.v21i1.4   
2021 Liu Y, Cui S, Sun J, Yan X, Han D. Identification of Potential Biomarkers for Psoriasis by DNA Methylation and Gene Expression Datasets. Frontiers in Genetics. 12: 722803. PMID 34512732 DOI: 10.3389/fgene.2021.722803   
2021 Kim GL, Kwak SH, Yu J. A case of monogenic diabetes mellitus caused by a novel heterozygous nonsense mutation in a 14-year-old girl. Journal of Pediatric Endocrinology & Metabolism : Jpem. PMID 34416793 DOI: 10.1515/jpem-2021-0275   
2021 Bäckdahl J, Franzén L, Massier L, Li Q, Jalkanen J, Gao H, Andersson A, Bhalla N, Thorell A, Rydén M, Ståhl PL, Mejhert N. Spatial mapping reveals human adipocyte subpopulations with distinct sensitivities to insulin. Cell Metabolism. PMID 34380013 DOI: 10.1016/j.cmet.2021.07.018   
2021 Xue J, Zhang B, Dou S, Zhou Q, Ding M, Zhou M, Wang H, Dong Y, Li D, Xie L. Revealing the Angiopathy of Lacrimal Gland Lesion in Type 2 Diabetes. Frontiers in Physiology. 12: 731234. PMID 34531764 DOI: 10.3389/fphys.2021.731234   
2021 Yu X, Ali MM, Li B, Fang T, Chen F. Transcriptome data-based identification of candidate genes involved in metabolism and accumulation of soluble sugars during fruit development in 'Huangguan' plum. Journal of Food Biochemistry. e13878. PMID 34337770 DOI: 10.1111/jfbc.13878   
2021 Martínez-Pinteño A, Gassó P, Prohens L, Segura AG, Parellada M, Saiz-Ruiz J, Cuesta MJ, Bernardo M, Lafuente A, Mas S, Rodríguez N. Identification of as a Key Gene Involved in Antipsychotic-Induced Metabolic Dysregulation Based on Integrative Bioinformatics Analysis of Multi-Tissue Gene Expression Data. Frontiers in Pharmacology. 12: 729474. PMID 34483940 DOI: 10.3389/fphar.2021.729474   
2021 Kingsmore KM, Bachali P, Catalina MD, Daamen AR, Heuer SE, Robl RD, Grammer AC, Lipsky PE. Altered expression of genes controlling metabolism characterizes the tissue response to immune injury in lupus. Scientific Reports. 11: 14789. PMID 34285256 DOI: 10.1038/s41598-021-93034-w   
2021 Li X, Li N, Li B, Feng Y, Zhou D, Chen G. Noncoding RNAs and RNA-binding proteins in diabetic wound healing. Bioorganic & Medicinal Chemistry Letters. 128311. PMID 34438011 DOI: 10.1016/j.bmcl.2021.128311   
2021 Ko EM, Kim JY, Lee S, Kim S, Hwang J, Oh JI. Regulation of the gene encoding the major isocitrate lyase in . Journal of Bacteriology. JB0040221. PMID 34516281 DOI: 10.1128/JB.00402-21   
2021 Ruppert PM, Deng L, Hooiveld GJ, Hangelbroek RW, Zeigerer A, Kersten S. RNA sequencing reveals niche gene expression effects of beta-hydroxybutyrate in primary myotubes. Life Science Alliance. 4. PMID 34407998 DOI: 10.26508/lsa.202101037   
2021 Artigas-Jerónimo S, Villar M, Estrada-Peña A, Velázquez-Campoy A, Alberdi P, de la Fuente J. Function of cofactor Akirin2 in the regulation of gene expression in model human Caucasian neutrophil-like HL60 cells. Bioscience Reports. 41. PMID 34291801 DOI: 10.1042/BSR20211120   
2021 Artigas-Jerónimo S, Villar M, Estrada-Peña A, Velázquez-Campoy A, Alberdi P, de la Fuente J. Function of cofactor Akirin2 in the regulation of gene expression in model human Caucasian neutrophil-like HL60 cells. Bioscience Reports. PMID 34223621 DOI: 10.1042/BCJ20210294   
2021 Ramos ML, Park D, Lim J, Park J, Tran K, Garcia EJ, Green E. Adaptive local false discovery rate procedures for highly spiky data and their application RNA sequencing data of yeast SET4 deletion mutants. Biometrical Journal. Biometrische Zeitschrift. PMID 34320248 DOI: 10.1002/bimj.202000256   
2021 Ramos ML, Park D, Lim J, Park J, Tran K, Garcia EJ, Green E. Adaptive local false discovery rate procedures for highly spiky data and their application RNA sequencing data of yeast SET4 deletion mutants. Biometrical Journal. Biometrische Zeitschrift. PMID 34320248 DOI: 10.1002/bimj.202000256   
2021 Marks JR, Beatty AE, Schwartz TS, Sorlin M, Lailvaux SP. Expression of insulin-like growth factors depends on both mass and resource availability in female green anoles (Anolis carolinensis). The Journal of Experimental Biology. 224. PMID 34370031 DOI: 10.1242/jeb.242665   
2021 Xu L, Liu P, Dai Z, Fan F, Zhang X. Fine-tuning the expression of pathway gene in yeast using a regulatory library formed by fusing a synthetic minimal promoter with different Kozak variants. Microbial Cell Factories. 20: 148. PMID 34320991 DOI: 10.1186/s12934-021-01641-z   
2021 Gaudet P, Logie C, Lovering RC, Kuiper M, Lægreid A, Thomas PD. Gene Ontology representation for transcription factor functions. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194752. PMID 34461313 DOI: 10.1016/j.bbagrm.2021.194752   
2021 Song S, Niu M, Liang Q, Wang L, Min H, Peng Y, Wang H, Gao Q. Statin Treatment Induced a Lipogenic Expression Hierarchical Network Centered by SREBF2 in the Liver. Frontiers in Endocrinology. 12: 573824. PMID 34349727 DOI: 10.3389/fendo.2021.573824   
2021 Tan D, Chen R, Mo Y, Gu S, Ma J, Xu W, Lu X, He H, Jiang F, Fan W, Wang Y, Chen X, Huang W. Quantitative control of noise in mammalian gene expression by dynamic histone regulation. Elife. 10. PMID 34379055 DOI: 10.7554/eLife.65654   
2021 Tooley JG, Catlin JP, Schaner Tooley CE. CREB-mediated transcriptional activation of NRMT1 drives muscle differentiation. Transcription. 1-17. PMID 34403304 DOI: 10.1080/21541264.2021.1963627   
2021 Zhu C, Li Z, Tang Y, Zhang L, Wen J, Wang Z, Su Y, Chen Y, Zhang H. TaWRKY10 plays a key role in the upstream of circadian gene TaLHY in wheat. Plant Science : An International Journal of Experimental Plant Biology. 310: 110973. PMID 34315591 DOI: 10.1016/j.plantsci.2021.110973   
2021 Zhu C, Li Z, Tang Y, Zhang L, Wen J, Wang Z, Su Y, Chen Y, Zhang H. TaWRKY10 plays a key role in the upstream of circadian gene TaLHY in wheat. Plant Science : An International Journal of Experimental Plant Biology. 310: 110973. PMID 34315591 DOI: 10.1016/j.plantsci.2021.110973   
2021 Meléndez-Ramírez C, Cuevas-Diaz Duran R, Barrios-García T, Giacoman-Lozano M, López-Ornelas A, Herrera-Gamboa J, Estudillo E, Soto-Reyes E, Velasco I, Treviño V. Dynamic landscape of chromatin accessibility and transcriptomic changes during differentiation of human embryonic stem cells into dopaminergic neurons. Scientific Reports. 11: 16977. PMID 34417498 DOI: 10.1038/s41598-021-96263-1   
2021 Lu L, Zhuang L, Shen X, Yang L. Glucotoxicity Activation of IL6 and IL11 and Subsequent Induction of Fibrosis May Be Involved in the Pathogenesis of Islet Dysfunction. Frontiers in Molecular Biosciences. 8: 708127. PMID 34497830 DOI: 10.3389/fmolb.2021.708127   
2021 Nussinov R, Zhang M, Maloney R, Jang H. Ras isoform-specific expression, chromatin accessibility, and signaling. Biophysical Reviews. 13: 489-505. PMID 34466166 DOI: 10.1007/s12551-021-00817-6   
2021 Azizoglu A, Brent R, Rudolf F. A precisely adjustable, variation-suppressed eukaryotic transcriptional controller to enable genetic discovery. Elife. 10. PMID 34342575 DOI: 10.7554/eLife.69549   
2021 Goodwin LR, Zapata G, Timpano S, Marenger J, Picketts DJ. Impaired SNF2L Chromatin Remodeling Prolongs Accessibility at Promoters Enriched for Fos/Jun Binding Sites and Delays Granule Neuron Differentiation. Frontiers in Molecular Neuroscience. 14: 680280. PMID 34295220 DOI: 10.3389/fnmol.2021.680280   
2021 Zheng Q, Li P, Zhou X, Qiang Y, Fan J, Lin Y, Chen Y, Guo J, Wang F, Xue H, Xiong J, Li F. Deficiency of the X-inactivation escaping gene in clear cell renal cell carcinoma promotes tumorigenicity by reprogramming glycogen metabolism and inhibiting ferroptosis. Theranostics. 11: 8674-8691. PMID 34522206 DOI: 10.7150/thno.60233   
2021 Zhao K, Kong D, Jin B, Smolke CD, Rhee SY. A novel form of bivalent chromatin associates with rapid induction of camalexin biosynthesis genes in response to a pathogen signal in Arabidopsis. Elife. 10. PMID 34523419 DOI: 10.7554/eLife.69508   
2021 Tang C, Li W, Klosterman SJ, Wang Y. Transcriptome Variations in in Response to Two Different Inorganic Nitrogen Sources. Frontiers in Microbiology. 12: 712701. PMID 34394062 DOI: 10.3389/fmicb.2021.712701   
2021 Ghafouri F, Bahrami A, Sadeghi M, Miraei-Ashtiani SR, Bakherad M, Barkema HW, Larose S. Omics Multi-Layers Networks Provide Novel Mechanistic and Functional Insights Into Fat Storage and Lipid Metabolism in Poultry. Frontiers in Genetics. 12: 646297. PMID 34306005 DOI: 10.3389/fgene.2021.646297   
2021 Chen X, Song B, Liu M, Qin L, Dong Z. Understanding the Role of Vib1 in Gene Expression during Cellulose Degradation. Journal of Fungi (Basel, Switzerland). 7. PMID 34436152 DOI: 10.3390/jof7080613   
2021 Huberman LB, Wu VW, Lee J, Daum C, O'Malley RC, Glass NL. Aspects of the Neurospora crassa Sulfur Starvation Response Are Revealed by Transcriptional Profiling and DNA Affinity Purification Sequencing. Msphere. e0056421. PMID 34523983 DOI: 10.1128/mSphere.00564-21   
2021 Zhang Z, Jia H, Liu N, Li H, Meng Q, Wu N, Cao Z, Dong J. The zinc finger protein StMR1 affects the pathogenicity and melanin synthesis of Setosphaeria turcica and directly regulates the expression of DHN melanin synthesis pathway genes. Molecular Microbiology. PMID 34278632 DOI: 10.1111/mmi.14786   
2021 Dai P, Li J, Chen Y, Zhang L, Zhang X, Wang J, Qi G, Zhang Y. Novel Functional Genes Involved in Transdifferentiation of Canine ADMSCs Into Insulin-Producing Cells, as Determined by Absolute Quantitative Transcriptome Sequencing Analysis. Frontiers in Cell and Developmental Biology. 9: 685494. PMID 34262902 DOI: 10.3389/fcell.2021.685494   
2021 Lei L, Bai YH, Jiang HY, He T, Li M, Wang JP. A bioinformatics analysis of the contribution of m6A methylation to the occurrence of diabetes mellitus. Endocrine Connections. PMID 34486983 DOI: 10.1530/EC-21-0328   
2021 Perie L, Verma N, Mueller E. The Forkhead Box Transcription Factor FoxP4 Regulates Thermogenic Programs in Adipocytes. Journal of Lipid Research. 100102. PMID 34384787 DOI: 10.1016/j.jlr.2021.100102   
2021 Wurihan W, Zou Y, Weber AM, Weldon K, Huang Y, Bao X, Zhu C, Wu X, Wang Y, Lai Z, Fan H. Identification of a GrgA-Euo-HrcA Transcriptional Regulatory Network in Chlamydia. Msystems. e0073821. PMID 34342542 DOI: 10.1128/mSystems.00738-21   
2021 Stec N, Doerfel K, Hills-Muckey K, Ettorre VM, Ercan S, Keil W, Hammell CM. An Epigenetic Priming Mechanism Mediated by Nutrient Sensing Regulates Transcriptional Output during C. elegans Development. Current Biology : Cb. 31: 809-826.e6. PMID 33357451 DOI: 10.1016/j.cub.2020.11.060   
2021 Cavalli M, Diamanti K, Dang Y, Xing P, Pan G, Chen X, Wadelius C. The Thioesterase as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver. Omics : a Journal of Integrative Biology. PMID 34520261 DOI: 10.1089/omi.2021.0093   
2021 Cheng F, Yun SJ, Cao JL, Chang MC, Meng JL, Liu JY, Cheng YF, Feng CP. Differential Gene Expression and Biological Analyses of Primary Hepatocytes Following D-Chiro-Inositol Supplement. Frontiers in Endocrinology. 12: 700049. PMID 34335474 DOI: 10.3389/fendo.2021.700049   
2021 He P, Lei J, Zou LX, Zhou GZ, Peng L, Deng Q, Liu XL. Effects of hypoxia on DNA hydroxymethylase Tet methylcytosine dioxygenase 2 in a KG-1 human acute myeloid leukemia cell line and its mechanism. Oncology Letters. 22: 692. PMID 34457047 DOI: 10.3892/ol.2021.12953   
2021 Deng C, Lv X, Li J, Zhang H, Liu Y, Du G, Amaro RL, Liu L. Synergistic improvement of N-acetylglucosamine production by engineering transcription factors and balancing redox cofactors. Metabolic Engineering. PMID 34329707 DOI: 10.1016/j.ymben.2021.07.012   
2021 Mellis IA, Edelstein HI, Truitt R, Goyal Y, Beck LE, Symmons O, Dunagin MC, Linares Saldana RA, Shah PP, Pérez-Bermejo JA, Padmanabhan A, Yang W, Jain R, Raj A. Responsiveness to perturbations is a hallmark of transcription factors that maintain cell identity in vitro. Cell Systems. PMID 34352221 DOI: 10.1016/j.cels.2021.07.003   
2021 Wang L, Li JH, Huang HY, Wu Q. [Serial deletions of tandem reverse CTCF sites reveal balanced regulatory landscape of enhancers]. Yi Chuan = Hereditas. 43: 775-791. PMID 34413017 DOI: 10.16288/j.yczz.21-132   
2021 Luo C, Liu J, Bilal M, Liu X, Wang X, Dong F, Liu Y, Zang S, Yin X, Yang X, Zhu T, Zhang S, Zhang W, Li B. Extracellular lipopeptide bacillomycin L regulates serial expression of genes for modulating multicellular behavior in Bacillus velezensis Bs916. Applied Microbiology and Biotechnology. PMID 34477941 DOI: 10.1007/s00253-021-11524-3