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Tong Yuan, Ph.D. - Publications

Affiliations: 
2007 Department of Botany and Microbiology University of Oklahoma, Norman, OK, United States 
Area:
Molecular Biology, Botany Biology
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zou Y, Ning D, Huang Y, Liang Y, Wang H, Duan L, Yuan T, He Z, Yang Y, Xue K, Van Nostrand JD, Zhou J. Functional structures of soil microbial community relate to contrasting NO emission patterns from a highly acidified forest. The Science of the Total Environment. 725: 138504. PMID 32302850 DOI: 10.1016/J.Scitotenv.2020.138504  0.339
2019 Ma X, Zhang Q, Zheng M, Gao Y, Yuan T, Hale L, Van Nostrand JD, Zhou J, Wan S, Yang Y. Microbial functional traits are sensitive indicators of mild disturbance by lamb grazing. The Isme Journal. PMID 30700789 DOI: 10.1038/S41396-019-0354-7  0.355
2019 Yang S, Zheng Q, Yuan M, Shi Z, Chiariello NR, Docherty KM, Dong S, Field CB, Gu Y, Gutknecht J, Hungate BA, Le Roux X, Ma X, Niboyet A, Yuan T, et al. Long-term elevated CO shifts composition of soil microbial communities in a Californian annual grassland, reducing growth and N utilization potentials. The Science of the Total Environment. 652: 1474-1481. PMID 30586832 DOI: 10.1016/J.Scitotenv.2018.10.353  0.341
2017 Li P, Jiang Z, Wang Y, Deng Y, Van Nostrand JD, Yuan T, Liu H, Wei D, Zhou J. Analysis of the functional gene structure and metabolic potential of microbial community in high arsenic groundwater. Water Research. 123: 268-276. PMID 28672211 DOI: 10.1016/J.Watres.2017.06.053  0.367
2017 Yu D, Xia M, Zhang L, Song Y, Duan Y, Yuan T, Yao M, Wu L, Tian C, Wu Z, Li X, Zhou J, Qiu D. RpoN (σ(54)) is required for floc formation but not for extracellular polysaccharide biosynthesis in a floc-forming Aquincola tertiaricarbonis strain. Applied and Environmental Microbiology. PMID 28500044 DOI: 10.1128/Aem.00709-17  0.402
2017 Wei Z, Yuan T, Tarkowská D, Kim J, Nam HG, Novák O, He K, Gou X, Li J. Brassinosteroid biosynthesis is modulated via a transcription factor cascade of COG1, PIF4 and PIF5. Plant Physiology. PMID 28438793 DOI: 10.1104/Pp.16.01778  0.356
2016 Van Nostrand JD, Yin H, Wu L, Yuan T, Zhou J. Hybridization of Environmental Microbial Community Nucleic Acids by GeoChip. Methods in Molecular Biology (Clifton, N.J.). 1399: 183-96. PMID 26791504 DOI: 10.1007/978-1-4939-3369-3_11  0.355
2016 Zhang J, Yuan T, Duan X, Wei X, Shi T, Li J, Russell SD, Gou X. Cis-regulatory elements determine germline specificity and expression level of an isopentenyltransferase gene in sperm cells of Arabidopsis. Plant Physiology. PMID 26739233 DOI: 10.1104/Pp.15.01510  0.674
2015 Ding J, Zhang Y, Wang M, Sun X, Cong J, Deng Y, Lu H, Yuan T, Van Nostrand JD, Li D, Zhou J, Yang Y. Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests. Molecular Ecology. PMID 26363284 DOI: 10.1111/Mec.13384  0.322
2015 Ding J, Zhang Y, Deng Y, Cong J, Lu H, Sun X, Yang C, Yuan T, Van Nostrand JD, Li D, Zhou J, Yang Y. Integrated metagenomics and network analysis of soil microbial community of the forest timberline. Scientific Reports. 5: 7994. PMID 25613225 DOI: 10.1038/Srep07994  0.32
2015 Ma J, Deng Y, Yuan T, Zhou J, Alvarez PJ. Succession of microbial functional communities in response to a pilot-scale ethanol-blended fuel release throughout the plume life cycle. Environmental Pollution (Barking, Essex : 1987). 198: 154-60. PMID 25603154 DOI: 10.1016/J.Envpol.2015.01.005  0.334
2014 Chen Y, Qin N, Guo J, Qian G, Fang D, Shi D, Xu M, Yang F, He Z, Van Nostrand JD, Yuan T, Deng Y, Zhou J, Li L. Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis. Bmc Genomics. 15: 753. PMID 25179593 DOI: 10.1186/1471-2164-15-753  0.303
2014 Xu M, Zhang Q, Xia C, Zhong Y, Sun G, Guo J, Yuan T, Zhou J, He Z. Elevated nitrate enriches microbial functional genes for potential bioremediation of complexly contaminated sediments. The Isme Journal. 8: 1932-44. PMID 24671084 DOI: 10.1038/Ismej.2014.42  0.315
2014 Tu Q, He Z, Li Y, Chen Y, Deng Y, Lin L, Hemme CL, Yuan T, Van Nostrand JD, Wu L, Zhou X, Shi W, Li L, Xu J, Zhou J. Development of HuMiChip for functional profiling of human microbiomes. Plos One. 9: e90546. PMID 24595026 DOI: 10.1371/Journal.Pone.0090546  0.333
2014 Yang F, Ning K, Chang X, Yuan X, Tu Q, Yuan T, Deng Y, Hemme CL, Van Nostrand J, Cui X, He Z, Chen Z, Guo D, Yu J, Zhang Y, et al. Saliva microbiota carry caries-specific functional gene signatures. Plos One. 9: e76458. PMID 24533043 DOI: 10.1371/Journal.Pone.0076458  0.358
2014 Tu Q, Yu H, He Z, Deng Y, Wu L, Van Nostrand JD, Zhou A, Voordeckers J, Lee YJ, Qin Y, Hemme CL, Shi Z, Xue K, Yuan T, Wang A, et al. GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis. Molecular Ecology Resources. 14: 914-28. PMID 24520909 DOI: 10.1111/1755-0998.12239  0.372
2013 Lee YJ, van Nostrand JD, Tu Q, Lu Z, Cheng L, Yuan T, Deng Y, Carter MQ, He Z, Wu L, Yang F, Xu J, Zhou J. The PathoChip, a functional gene array for assessing pathogenic properties of diverse microbial communities. The Isme Journal. 7: 1974-84. PMID 23765101 DOI: 10.1038/Ismej.2013.88  0.374
2013 Siering PL, Wolfe GV, Wilson MS, Yip AN, Carey CM, Wardman CD, Shapiro RS, Stedman KM, Kyle J, Yuan T, Van Nostrand JD, He Z, Zhou J. Microbial biogeochemistry of Boiling Springs Lake: a physically dynamic, oligotrophic, low-pH geothermal ecosystem. Geobiology. 11: 356-76. PMID 23679065 DOI: 10.1111/Gbi.12041  0.362
2012 Russell SD, Gou X, Wong CE, Wang X, Yuan T, Wei X, Bhalla PL, Singh MB. Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineage. The New Phytologist. 195: 560-73. PMID 22716952 DOI: 10.1111/J.1469-8137.2012.04199.X  0.678
2011 Ge L, Gou X, Yuan T, Strout GW, Nakashima J, Blancaflor EB, Tian HQ, Russell SD. Migration of sperm cells during pollen tube elongation in Arabidopsis thaliana: behavior during transport, maturation and upon dissociation of male germ unit associations. Planta. 233: 325-32. PMID 21046146 DOI: 10.1007/S00425-010-1305-8  0.579
2010 Russell SD, Gou X, Wei X, Yuan T. Male gamete biology in flowering plants. Biochemical Society Transactions. 38: 598-603. PMID 20298228 DOI: 10.1042/Bst0380598  0.653
2010 Gou X, He K, Yang H, Yuan T, Lin H, Clouse SD, Li J. Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana. Bmc Genomics. 11: 19. PMID 20064227 DOI: 10.1186/1471-2164-11-19  0.33
2009 Gou X, Yuan T, Wei X, Russell SD. Gene expression in the dimorphic sperm cells of Plumbago zeylanica: transcript profiling, diversity, and relationship to cell type. The Plant Journal : For Cell and Molecular Biology. 60: 33-47. PMID 19500307 DOI: 10.1111/J.1365-313X.2009.03934.X  0.672
2008 He K, Gou X, Powell RA, Yang H, Yuan T, Guo Z, Li J. Receptor-like protein kinases, BAK1 and BKK1, regulate a light-dependent cell-death control pathway. Plant Signaling & Behavior. 3: 813-5. PMID 19704566 DOI: 10.4161/Psb.3.10.5890  0.343
2007 He K, Gou X, Yuan T, Lin H, Asami T, Yoshida S, Russell SD, Li J. BAK1 and BKK1 regulate brassinosteroid-dependent growth and brassinosteroid-independent cell-death pathways. Current Biology : Cb. 17: 1109-15. PMID 17600708 DOI: 10.1016/J.Cub.2007.05.036  0.563
2007 Yuan T, Fujioka S, Takatsuto S, Matsumoto S, Gou X, He K, Russell SD, Li J. BEN1, a gene encoding a dihydroflavonol 4-reductase (DFR)-like protein, regulates the levels of brassinosteroids in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 51: 220-33. PMID 17521414 DOI: 10.1111/J.1365-313X.2007.03129.X  0.57
2006 Wei X, Gou X, Yuan T, Russell SD. A highly efficient in vitro plant regeneration system and Agrobacterium-mediated transformation in Plumbago zeylanica. Plant Cell Reports. 25: 513-21. PMID 16470412 DOI: 10.1007/S00299-006-0114-9  0.602
2005 Tian HQ, Yuan T, Russell SD. Relationship between double fertilization and the cell cycle in male and female gametes of tobacco Sexual Plant Reproduction. 17: 242-252. DOI: 10.1007/S00497-004-0233-9  0.532
2002 Wan S, Yuan T, Bowdish S, Wallace L, Russell SD, Luo Y. Response of an allergenic species, Ambrosia psilostachya (Asteraceae), to experimental warming and clipping: implications for public health. American Journal of Botany. 89: 1843-6. PMID 21665612 DOI: 10.3732/Ajb.89.11.1843  0.478
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