Chittaranjan Das - Publications

Affiliations: 
Chemistry Purdue University, West Lafayette, IN, United States 
Area:
Biochemistry
Website:
https://www.chem.purdue.edu/das/people.php

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Hausman JM, Kenny S, Iyer S, Babar A, Qiu J, Fu J, Luo ZQ, Das C. The Two Deubiquitinating Enzymes from Have Distinct Ubiquitin Recognition Properties. Biochemistry. PMID 32275137 DOI: 10.1021/acs.biochem.9b01107  0.56
2019 Puvar K, Iyer S, Sheedlo MJ, Das C. Purification and functional characterization of the DUB domain of SdeA. Methods in Enzymology. 618: 343-355. PMID 30850059 DOI: 10.1016/bs.mie.2018.12.024  0.6
2017 Scarborough NM, Godaliyadda GMDP, Ye DH, Kissick DJ, Zhang S, Newman JA, Sheedlo MJ, Chowdhury A, Fischetti RF, Das C, Buzzard GT, Bouman CA, Simpson GJ. Synchrotron X-Ray Diffraction Dynamic Sampling for Protein Crystal Centering. Is&T International Symposium On Electronic Imaging. 2017: 6-9. PMID 29527589 DOI: 10.2352/ISSN.2470-1173.2017.17.COIMG-415  0.6
2017 Scarborough NM, Godaliyadda GM, Ye DH, Kissick DJ, Zhang S, Newman JA, Sheedlo MJ, Chowdhury AU, Fischetti RF, Das C, Buzzard GT, Bouman CA, Simpson GJ. Dynamic X-ray diffraction sampling for protein crystal positioning. Journal of Synchrotron Radiation. 24: 188-195. PMID 28009558 DOI: 10.1107/S160057751601612X  0.6
2016 Nepal M, Sheedlo MJ, Das C, Chmielewski J. Accessing Three-Dimensional Crystals with Incorporated Guests through Metal-Directed Coiled-Coil Peptide Assembly. Journal of the American Chemical Society. PMID 27500907 DOI: 10.1021/jacs.6b06708  0.6
2016 Newman JA, Zhang S, Sullivan SZ, Dow XY, Becker M, Sheedlo MJ, Stepanov S, Carlsen MS, Everly RM, Das C, Fischetti RF, Simpson GJ. Guiding synchrotron X-ray diffraction by multimodal video-rate protein crystal imaging. Journal of Synchrotron Radiation. 23: 959-965. PMID 27359145 DOI: 10.1107/S1600577516005919  0.6
2016 Qiu J, Sheedlo MJ, Yu K, Tan Y, Nakayasu ES, Das C, Liu X, Luo ZQ. Ubiquitination independent of E1 and E2 enzymes by bacterial effectors. Nature. PMID 27049943 DOI: 10.1038/nature17657  1
2015 Sheedlo MJ, Qiu J, Tan Y, Paul LN, Luo ZQ, Das C. Structural basis of substrate recognition by a bacterial deubiquitinase important for dynamics of phagosome ubiquitination. Proceedings of the National Academy of Sciences of the United States of America. PMID 26598703 DOI: 10.1073/pnas.1514568112  1
2015 Bueno AN, Shrestha RK, Ronau JA, Babar A, Sheedlo MJ, Fuchs JE, Paul LN, Das C. Dynamics of an Active-Site Flap Contributes to Catalysis in a JAMM Family Metallo Deubiquitinase. Biochemistry. 54: 6038-51. PMID 26368668 DOI: 10.1021/acs.biochem.5b00631  1
2015 Newman JA, Scarborough NM, Pogranichniy NR, Shrestha RK, Closser RG, Das C, Simpson GJ. Intercalating dyes for enhanced contrast in second-harmonic generation imaging of protein crystals. Acta Crystallographica. Section D, Biological Crystallography. 71: 1471-7. PMID 26143918 DOI: 10.1107/S1399004715008287  1
2014 Ronau JA, Paul LN, Fuchs JE, Liedl KR, Abu-Omar MM, Das C. A conserved acidic residue in phenylalanine hydroxylase contributes to cofactor affinity and catalysis. Biochemistry. 53: 6834-48. PMID 25295853 DOI: 10.1021/bi500734h  1
2014 Shrestha RK, Ronau JA, Davies CW, Guenette RG, Strieter ER, Paul LN, Das C. Insights into the mechanism of deubiquitination by JAMM deubiquitinases from cocrystal structures of the enzyme with the substrate and product. Biochemistry. 53: 3199-217. PMID 24787148 DOI: 10.1021/bi5003162  1
2013 Davies CW, Paul LN, Das C. Mechanism of recruitment and activation of the endosome-associated deubiquitinase AMSH. Biochemistry. 52: 7818-29. PMID 24151880 DOI: 10.1021/bi401106b  1
2013 Ronau JA, Paul LN, Fuchs JE, Corn IR, Wagner KT, Liedl KR, Abu-Omar MM, Das C. An additional substrate binding site in a bacterial phenylalanine hydroxylase. European Biophysics Journal : Ebj. 42: 691-708. PMID 23860686 DOI: 10.1007/s00249-013-0919-8  1
2013 Madden JT, Toth SJ, Dettmar CM, Newman JA, Oglesbee RA, Hedderich HG, Everly RM, Becker M, Ronau JA, Buchanan SK, Cherezov V, Morrow ME, Xu S, Ferguson D, Makarov O, ... Das C, et al. Integrated nonlinear optical imaging microscope for on-axis crystal detection and centering at a synchrotron beamline. Journal of Synchrotron Radiation. 20: 531-40. PMID 23765294 DOI: 10.1107/S0909049513007942  1
2013 Arnst JL, Davies CW, Raja SM, Das C, Natarajan A. High-throughput compatible fluorescence resonance energy transfer-based assay to identify small molecule inhibitors of AMSH deubiquitinase activity. Analytical Biochemistry. 440: 71-7. PMID 23747283 DOI: 10.1016/j.ab.2013.05.017  1
2013 Davies CW, Das C. HHARI is one HECT of a RING. Structure (London, England : 1993). 21: 872-4. PMID 23747110 DOI: 10.1016/j.str.2013.05.003  1
2013 Morrow ME, Kim MI, Ronau JA, Sheedlo MJ, White RR, Chaney J, Paul LN, Lill MA, Artavanis-Tsakonas K, Das C. Stabilization of an unusual salt bridge in ubiquitin by the extra C-terminal domain of the proteasome-associated deubiquitinase UCH37 as a mechanism of its exo specificity. Biochemistry. 52: 3564-78. PMID 23617878 DOI: 10.1021/bi4003106  1
2013 DeWalt EL, Begue VJ, Ronau JA, Sullivan SZ, Das C, Simpson GJ. Polarization-resolved second-harmonic generation microscopy as a method to visualize protein-crystal domains. Acta Crystallographica. Section D, Biological Crystallography. 69: 74-81. PMID 23275165 DOI: 10.1107/S0907444912042503  1
2012 Tsou WL, Sheedlo MJ, Morrow ME, Blount JR, McGregor KM, Das C, Todi SV. Systematic analysis of the physiological importance of deubiquitinating enzymes. Plos One. 7: e43112. PMID 22937016 DOI: 10.1371/journal.pone.0043112  1
2012 Davies CW, Chaney J, Korbel G, Ringe D, Petsko GA, Ploegh H, Das C. The co-crystal structure of ubiquitin carboxy-terminal hydrolase L1 (UCHL1) with a tripeptide fluoromethyl ketone (Z-VAE(OMe)-FMK). Bioorganic & Medicinal Chemistry Letters. 22: 3900-4. PMID 22617491 DOI: 10.1016/j.bmcl.2012.04.124  1
2012 Boudreaux DA, Chaney J, Maiti TK, Das C. Contribution of active site glutamine to rate enhancement in ubiquitin C-terminal hydrolases. The Febs Journal. 279: 1106-18. PMID 22284438 DOI: 10.1111/j.1742-4658.2012.08507.x  1
2011 Maiti TK, Permaul M, Boudreaux DA, Mahanic C, Mauney S, Das C. Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme. The Febs Journal. 278: 4917-26. PMID 21995438 DOI: 10.1111/j.1742-4658.2011.08393.x  1
2011 Davies CW, Paul LN, Kim MI, Das C. Structural and thermodynamic comparison of the catalytic domain of AMSH and AMSH-LP: nearly identical fold but different stability. Journal of Molecular Biology. 413: 416-29. PMID 21888914 DOI: 10.1016/j.jmb.2011.08.029  1
2010 Boudreaux DA, Maiti TK, Davies CW, Das C. Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation. Proceedings of the National Academy of Sciences of the United States of America. 107: 9117-22. PMID 20439756 DOI: 10.1073/pnas.0910870107  1
2006 Das C, Hoang QQ, Kreinbring CA, Luchansky SJ, Meray RK, Ray SS, Lansbury PT, Ringe D, Petsko GA. Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1. Proceedings of the National Academy of Sciences of the United States of America. 103: 4675-80. PMID 16537382 DOI: 10.1073/pnas.0510403103  1
2003 Aravinda S, Shamala N, Das C, Sriranjini A, Karle IL, Balaram P. Aromatic-aromatic interactions in crystal structures of helical peptide scaffolds containing projecting phenylalanine residues. Journal of the American Chemical Society. 125: 5308-15. PMID 12720442 DOI: 10.1021/ja0341283  1
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