Carlos E. Catalano - Publications

Affiliations: 
Medicinal Chemistry University of Washington, Seattle, Seattle, WA 
Area:
General Biophysics, Virology Biology, Nanoscience

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 delToro D, Ortiz D, Ordyan M, Pajak J, Sippy J, Catala A, Oh CS, Vu A, Arya G, Smith DE, Catalano CE, Feiss M. Functional Dissection of a Viral DNA Packaging Machine's Walker B Motif. Journal of Molecular Biology. PMID 31473160 DOI: 10.1016/j.jmb.2019.08.012  0.32
2018 Ortiz D, delToro D, Ordyan M, Pajak J, Sippy J, Catala A, Oh CS, Vu A, Arya G, Feiss M, Smith DE, Catalano CE. Evidence that a catalytic glutamate and an 'Arginine Toggle' act in concert to mediate ATP hydrolysis and mechanochemical coupling in a viral DNA packaging motor. Nucleic Acids Research. PMID 30541105 DOI: 10.1093/nar/gky1217  0.32
2017 Yang TC, Ortiz D, Yang Q, De Angelis RW, Sanyal SJ, Catalano CE. Physical and Functional Characterization of a Viral Genome Maturation Complex. Biophysical Journal. 112: 1551-1560. PMID 28445747 DOI: 10.1016/j.bpj.2017.02.041  0.32
2016 delToro D, Ortiz D, Ordyan M, Sippy J, Oh CS, Keller N, Feiss M, Catalano CE, Smith D. Walker-A motif acts to coordinate ATP hydrolysis with motor output in viral DNA packaging. Journal of Molecular Biology. PMID 27139643 DOI: 10.1016/j.jmb.2016.04.029  0.44
2016 Wang K, Fu Cy, Catalano CE, Prevelige PE, Doerschuk PC, Johnson JE. Detecting asymmetry in the presence of symmetry with maximum likelihood threedimensional reconstructions of viruses from electron microscope images Iet Image Processing. 10: 624-629. DOI: 10.1049/iet-ipr.2015.0737  0.44
2015 Yang TC, Ortiz D, Nosaka L, Lander GC, Catalano CE. Thermodynamic Interrogation of the Assembly of a Viral Genome Packaging Motor Complex. Biophysical Journal. 109: 1663-75. PMID 26488657 DOI: 10.1016/j.bpj.2015.08.037  0.44
2015 Nakatani-Webster E, Hu SL, Atkins WM, Catalano CE. Assembly and characterization of gp160-nanodiscs: A new platform for biochemical characterization of HIV envelope spikes. Journal of Virological Methods. PMID 26424619 DOI: 10.1016/j.jviromet.2015.09.011  0.44
2015 Yang TC, Catalano CE, Maluf NK. Analytical Ultracentrifugation as a Tool to Study Nonspecific Protein-DNA Interactions. Methods in Enzymology. 562: 305-30. PMID 26412658 DOI: 10.1016/bs.mie.2015.04.009  0.44
2014 Sanyal SJ, Yang TC, Catalano CE. Integration host factor assembly at the cohesive end site of the bacteriophage lambda genome: implications for viral DNA packaging and bacterial gene regulation. Biochemistry. 53: 7459-70. PMID 25335823 DOI: 10.1021/bi501025s  0.44
2014 Chang JR, Song EH, Nakatani-Webster E, Monkkonen L, Ratner DM, Catalano CE. Phage lambda capsids as tunable display nanoparticles. Biomacromolecules. 15: 4410-9. PMID 25319793 DOI: 10.1021/bm5011646  0.44
2014 Hernando-Pérez M, Lambert S, Nakatani-Webster E, Catalano CE, de Pablo PJ. Cementing proteins provide extra mechanical stabilization to viral cages. Nature Communications. 5: 4520. PMID 25072871 DOI: 10.1038/ncomms5520  0.44
2014 Sae-Ueng U, Liu T, Catalano CE, Huffman JB, Homa FL, Evilevitch A. Major capsid reinforcement by a minor protein in herpesviruses and phage. Nucleic Acids Research. 42: 9096-107. PMID 25053840 DOI: 10.1093/nar/gku634  0.44
2013 Koudelka KJ, Ippoliti S, Medina E, Shriver LP, Trauger SA, Catalano CE, Manchester M. Lysine addressability and mammalian cell interactions of bacteriophage λ procapsids. Biomacromolecules. 14: 4169-76. PMID 24251756 DOI: 10.1021/bm401577f  0.44
2013 Silverman JM, Agnello DM, Zheng H, Andrews BT, Li M, Catalano CE, Gonen T, Mougous JD. Haemolysin coregulated protein is an exported receptor and chaperone of type VI secretion substrates. Molecular Cell. 51: 584-93. PMID 23954347 DOI: 10.1016/j.molcel.2013.07.025  0.44
2013 Singh P, Nakatani E, Goodlett DR, Catalano CE. A pseudo-atomic model for the capsid shell of bacteriophage lambda using chemical cross-linking/mass spectrometry and molecular modeling Journal of Molecular Biology. 425: 3378-3388. PMID 23811054 DOI: 10.1016/j.jmb.2013.06.026  0.44
2013 Andrews BT, Catalano CE. Strong subunit coordination drives a powerful viral DNA packaging motor. Proceedings of the National Academy of Sciences of the United States of America. 110: 5909-14. PMID 23530228 DOI: 10.1073/pnas.1222820110  0.44
2012 Andrews BT, Catalano CE. The enzymology of a viral genome packaging motor is influenced by the assembly state of the motor subunits. Biochemistry. 51: 9342-53. PMID 23134123 DOI: 10.1021/bi300890y  0.44
2012 Medina E, Nakatani E, Kruse S, Catalano CE. Thermodynamic characterization of viral procapsid expansion into a functional capsid shell. Journal of Molecular Biology. 418: 167-80. PMID 22365932 DOI: 10.1016/j.jmb.2012.02.020  0.44
2012 Chang JR, Andrews BT, Catalano CE. Energy-independent helicase activity of a viral genome packaging motor. Biochemistry. 51: 391-400. PMID 22191393 DOI: 10.1021/bi201604b  0.44
2012 Nurmemmedov E, Castelnovo M, Medina E, Catalano CE, Evilevitch A. Challenging packaging limits and infectivity of phage λ. Journal of Molecular Biology. 415: 263-73. PMID 22108169 DOI: 10.1016/j.jmb.2011.11.015  0.44
2011 Medina EM, Andrews BT, Nakatani E, Catalano CE. The bacteriophage lambda gpNu3 scaffolding protein is an intrinsically disordered and biologically functional procapsid assembly catalyst. Journal of Molecular Biology. 412: 723-36. PMID 21821043 DOI: 10.1016/j.jmb.2011.07.045  0.44
2010 Medina E, Wieczorek D, Medina EM, Yang Q, Feiss M, Catalano CE. Assembly and maturation of the bacteriophage lambda procapsid: gpC is the viral protease. Journal of Molecular Biology. 401: 813-30. PMID 20620152 DOI: 10.1016/j.jmb.2010.06.060  0.44
2010 Tsay JM, Sippy J, DelToro D, Andrews BT, Draper B, Rao V, Catalano CE, Feiss M, Smith DE. Mutations altering a structurally conserved loop-helix-loop region of a viral packaging motor change DNA translocation velocity and processivity. The Journal of Biological Chemistry. 285: 24282-9. PMID 20525695 DOI: 10.1074/jbc.M110.129395  0.44
2009 Yang Q, Catalano CE, Maluf NK. Kinetic analysis of the genome packaging reaction in bacteriophage lambda. Biochemistry. 48: 10705-15. PMID 19788336 DOI: 10.1021/bi901016n  0.44
2008 Yang Q, Maluf NK, Catalano CE. Packaging of a unit-length viral genome: the role of nucleotides and the gpD decoration protein in stable nucleocapsid assembly in bacteriophage lambda. Journal of Molecular Biology. 383: 1037-48. PMID 18801370 DOI: 10.1016/j.jmb.2008.08.063  0.44
2007 Nurmemmedov E, Castelnovo M, Catalano CE, Evilevitch A. Biophysics of viral infectivity: Matching genome length with capsid size Quarterly Reviews of Biophysics. 40: 327-356. PMID 18423102 DOI: 10.1017/S0033583508004666  0.44
2007 Fuller DN, Raymer DM, Rickgauer JP, Robertson RM, Catalano CE, Anderson DL, Grimes S, Smith DE. Measurements of single DNA molecule packaging dynamics in bacteriophage lambda reveal high forces, high motor processivity, and capsid transformations. Journal of Molecular Biology. 373: 1113-22. PMID 17919653 DOI: 10.1016/j.jmb.2007.09.011  0.44
2007 Ortega ME, Gaussier H, Catalano CE. The DNA maturation domain of gpA, the DNA packaging motor protein of bacteriophage lambda, contains an ATPase site associated with endonuclease activity. Journal of Molecular Biology. 373: 851-65. PMID 17870092 DOI: 10.1016/j.jmb.2007.07.067  0.44
2007 Smith DE, Fuller DN, Raymer DM, Rickgauer P, Grimes S, Jardine PJ, Anderson DL, Catalano CE, Kottadiel V, Rao VB. Studies of viral DNA packaging motors with optical tweezers: A comparison of motor function in bacteriophages Φ29, λ, and T4 Proceedings of Spie - the International Society For Optical Engineering. 6644. DOI: 10.1117/12.739629  0.44
2006 Maluf NK, Gaussier H, Bogner E, Feiss M, Catalano CE. Assembly of bacteriophage lambda terminase into a viral DNA maturation and packaging machine. Biochemistry. 45: 15259-68. PMID 17176048 DOI: 10.1021/bi0615036  0.44
2006 Khrapunov S, Brenowitz M, Rice PA, Catalano CE. Binding then bending: a mechanism for wrapping DNA. Proceedings of the National Academy of Sciences of the United States of America. 103: 19217-8. PMID 17159146 DOI: 10.1073/pnas.0609223103  0.44
2006 Ortega ME, Catalano CE. Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: implications for the assembly of a genome-packaging motor. Biochemistry. 45: 5180-9. PMID 16618107 DOI: 10.1021/bi052284b  0.44
2006 Gaussier H, Yang Q, Catalano CE. Building a virus from scratch: assembly of an infectious virus using purified components in a rigorously defined biochemical assay system. Journal of Molecular Biology. 357: 1154-66. PMID 16476446 DOI: 10.1016/j.jmb.2006.01.013  0.44
2005 Gaussier H, Ortega ME, Maluf NK, Catalano CE. Nucleotides regulate the conformational state of the small terminase subunit from bacteriophage lambda: implications for the assembly of a viral genome-packaging motor. Biochemistry. 44: 9645-56. PMID 16008350 DOI: 10.1021/bi050333e  0.44
2005 Maluf NK, Yang Q, Catalano CE. Self-association properties of the bacteriophage lambda terminase holoenzyme: implications for the DNA packaging motor. Journal of Molecular Biology. 347: 523-42. PMID 15755448 DOI: 10.1016/j.jmb.2005.01.016  0.44
2005 Wang H, Wu I, Yang Q, Catalano CE, Serwer P. Single-particle visualization of assembly: I. Dimerization in a planar zone. Journal of Microscopy. 217: 83-92. PMID 15655066 DOI: 10.1111/j.0022-2720.2005.01438.x  0.44
2004 Yang Q, Catalano CE. A Minimal Kinetic Model for a Viral DNA Packaging Machine Biochemistry. 43: 289-299. PMID 14717582 DOI: 10.1021/bi035532h  0.44
2003 Yang Q, Catalano CE. Biochemical characterization of bacteriophage lambda genome packaging in vitro Virology. 305: 276-287. PMID 12573573 DOI: 10.1006/viro.2002.1602  0.44
2002 De Beer T, Fang J, Ortega M, Yang Q, Maes L, Duffy C, Berton N, Sippy J, Overduin M, Feiss M, Catalano CE. Insights into specific DNA recognition during the assembly of a viral genome packaging machine Molecular Cell. 9: 981-991. PMID 12049735 DOI: 10.1016/S1097-2765(02)00537-3  0.44
2001 Hang JQ, Catalano CE, Feiss M. The functional asymmetry of cosN, the nicking site for bacteriophage λ DNA packaging, is dependent on the terminase binding site, cosB Biochemistry. 40: 13370-13377. PMID 11683647 DOI: 10.1021/bi011126r  0.44
2001 Bain DL, Berton N, Ortega M, Baran J, Yang Q, Catalano CE. Biophysical Characterization of the DNA Binding Domain of gpNu1, a Viral DNA Packaging Protein Journal of Biological Chemistry. 276: 20175-20181. PMID 11279084 DOI: 10.1074/jbc.M100517200  0.44
2000 De Beer T, Ortega M, Berton N, Yang Q, Overduin M, Catalano CE. Letter to the editor: Assignment of the 1H, 13C, and 15N resonances of the DNA binding domain of gpNu1, a genome packaging protein from bacteriophage λ [1] Journal of Biomolecular Nmr. 18: 69-70. PMID 11061230 DOI: 10.1023/A:1008306326438  0.44
2000 Catalano CE. The terminase enzyme from bacteriophage lambda: A DNA-packaging machine Cellular and Molecular Life Sciences. 57: 128-148. PMID 10949585 DOI: 10.1007/s000180050503  0.44
1999 Yang Q, Berton N, Manning MC, Catalano CE. Domain structure of gpNu1, a phage lambda DNA packaging protein Biochemistry. 38: 14238-14247. PMID 10571997 DOI: 10.1021/bi991408f  0.44
1999 Woods L, Catalano CE. Kinetic characterization of the GTPase activity of phage λ terminase: Evidence for communication between the two 'NTPase' catalytic sites of the enzyme Biochemistry. 38: 14624-14630. PMID 10545186 DOI: 10.1021/bi990866l  0.44
1999 Hang Q, Woods L, Feiss M, Catalano CE. Cloning, expression, and biochemical characterization of hexahistidine- tagged terminase proteins Journal of Biological Chemistry. 274: 15305-15314. PMID 10336415 DOI: 10.1074/jbc.274.22.15305  0.44
1999 Yang Q, De Beer T, Woods L, Meyer JD, Manning MC, Overduin M, Catalano CE. Cloning, expression, and characterization of a DNA binding domain of gpNu1, a phage λ DNA packaging protein Biochemistry. 38: 465-477. PMID 9890930 DOI: 10.1021/bi981271d  0.44
1998 Hanagan A, Meyer JD, Johnson L, Manning MC, Catalano CE. The phage lambda terminase enzyme: 2. Refolding of the gpNu1 subunit from the detergent-denatured and guanidinium hydrochloride-denatured state yields different oligomerization states and altered protein stabilities International Journal of Biological Macromolecules. 23: 37-48. PMID 9644595 DOI: 10.1016/S0141-8130(98)00010-5  0.44
1998 Meyer JD, Hanagan A, Manning MC, Catalano CE. The phage lambda terminase enzyme: 1. Reconstitution of the holoenzyme from the individual subunits enhances the thermal stability of the small subunit International Journal of Biological Macromolecules. 23: 27-36. PMID 9644594 DOI: 10.1016/S0141-8130(98)00009-9  0.44
1997 Yang Q, Catalano CE. Kinetic characterization of the strand separation ('Helicase') activity of the DNA packaging enzyme from bacteriophage Biochemistry. 36: 10638-10645. PMID 9271494 DOI: 10.1021/bi970689t  0.44
1997 Woods L, Terpening C, Catalano CE. Kinetic analysis of the endonuclease activity of phage λ terminase: Assembly of a catalytically competent nicking complex is rate-limiting Biochemistry. 36: 5777-5785. PMID 9153418 DOI: 10.1021/bi963044m  0.44
1997 Yang Q, Hanagan A, Catalano CE. Assembly of a nucleoprotein complex required for DNA packaging by bacteriophage λ Biochemistry. 36: 2744-2752. PMID 9062101 DOI: 10.1021/bi9622682  0.44
1996 Hwang Y, Catalano CE, Feiss M. Kinetic and mutational dissection of the two ATPase activities of terminase, the DNA packaging enzyme of bacteriophage λ Biochemistry. 35: 2796-2803. PMID 8611586 DOI: 10.1021/bi952322z  0.44
1995 Catalano CE, Cue D, Feiss M. Virus DNA packaging: the strategy used by phage lambda. Molecular Microbiology. 16: 1075-86. PMID 8577244 DOI: 10.1111/j.1365-2958.1995.tb02333.x  0.44
1993 Tomka MA, Catalano CE. Physical and kinetic characterization of the DNA packaging enzyme from bacteriophage λ Journal of Biological Chemistry. 268: 3056-3065. PMID 8428984  0.44
1993 Tomka MA, Catalano CE. Kinetic characterization of the ATPase activity of the DNA packaging enzyme from bacteriophage λ Biochemistry. 32: 11992-11997. PMID 8218275  0.44
1990 Catalano CE, Allen DJ, Benkovic SJ. Interaction of Escherichia coli DNA polymerase I with azidoDNA and fluorescent DNA probes: identification of protein-DNA contacts. Biochemistry. 29: 3612-21. PMID 2187527  0.44
1989 Catalano CE, Choe YS, Ortiz De Montellano PR. Reactions of the protein radical in peroxide-treated myoglobin. Formation of a heme-protein cross-link Journal of Biological Chemistry. 264: 10534-10541. PMID 2732236  0.44
1989 Catalano CE, Benkovic SJ. Inactivation of DNA polymerase I (Klenow fragment) by adenosine 2′,3′-epoxide 5′-triphosphate: Evidence for the formation of a tight-binding inhibitor Biochemistry. 28: 4374-4382. PMID 2669951  0.44
1987 Ortiz de Montellano PR, Choe YS, DePillis G, Catalano CE. Structure-mechanism relationships in hemoproteins. Oxygenations catalyzed by chloroperoxidase and horseradish peroxidase Journal of Biological Chemistry. 262: 11641-11646. PMID 3624229  0.44
1987 Catalano CE, Ortiz De Montellano PR. Oxene transfer, electron abstraction, and cooxidation in the epoxidation of stilbene and 7,8-dihydroxy-7,8-dihydrobenzo[a]pyrene by hemoglobin Biochemistry. 26: 8373-8380. PMID 3442662  0.44
1985 Ortiz de Montellano PR, Catalano CE. Expoxidation of styrene by hemoglobin and myoglobin. Transfer of oxidizing equivalents to the protein surface Journal of Biological Chemistry. 260: 9265-9271. PMID 4019473  0.44
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