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Ricardo Cabrera - Publications

Affiliations: 
Biology Universidad de Chile, Santiago, Región Metropolitana, Chile 
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Cerda A, Moreno JC, Acosta D, Godoy F, Cáceres JC, Cabrera R, Stange C. Functional characterisation and in silico modelling of MdPSY2 variants and MdPSY5 phytoene synthases from Malus domestica. Journal of Plant Physiology. 249: 153166. PMID 32422487 DOI: 10.1016/J.Jplph.2020.153166  0.322
2020 Martínez R, Bernal C, Álvarez R, Concha C, Araya F, Cabrera R, Dhoke GV, Davari MD. Deletion and Randomization of Structurally Variable Regions in Lipase A (BSLA) Alter Its Stability and Hydrolytic Performance Against Long Chain Fatty Acid Esters. International Journal of Molecular Sciences. 21. PMID 32183336 DOI: 10.3390/Ijms21061990  0.422
2019 Briones X, Villalobos V, Queneau Y, Danna CS, Muñoz R, Ríos HE, Pavez J, Páez M, Cabrera R, Tamayo L, Urzúa MD. Surfaces based on amino acid functionalized polyelectrolyte films towards active surfaces for enzyme immobilization. Materials Science & Engineering. C, Materials For Biological Applications. 104: 109938. PMID 31499948 DOI: 10.1016/J.Msec.2019.109938  0.57
2019 Campos F, Álvarez JA, Ortiz-Severín J, Varas MA, Lagos CF, Cabrera R, Álvarez SA, Chávez FP. Fluorescence enzymatic assay for bacterial polyphosphate kinase 1 (PPK1) as a platform for screening antivirulence molecules. Infection and Drug Resistance. 12: 2237-2242. PMID 31413600 DOI: 10.2147/Idr.S181906  0.341
2019 Murillo-López J, Zinovjev K, Pereira H, Caniuguir A, Garratt R, Babul J, Recabarren R, Alzate-Morales J, Caballero J, Tuñón I, Cabrera R. Studying the phosphoryl transfer mechanism of the phosphofructokinase-2: from X-ray structure to quantum mechanics/molecular mechanics simulations. Chemical Science. 10: 2882-2892. PMID 30996866 DOI: 10.1039/C9Sc00094A  0.682
2018 Rivero M, Torres-Paris C, Muñoz R, Cabrera R, Navarro CA, Jerez CA. Inorganic Polyphosphate, Exopolyphosphatase, and -Like Transporters May Be Involved in Copper Resistance in DSM 5348. Archaea (Vancouver, B.C.). 2018: 5251061. PMID 29692683 DOI: 10.1155/2018/5251061  0.58
2018 Armingol E, Tobar E, Cabrera R. Understanding the impact of the cofactor swapping of isocitrate dehydrogenase over the growth phenotype of Escherichia coli on acetate by using constraint-based modeling. Plos One. 13: e0196182. PMID 29677222 DOI: 10.1371/Journal.Pone.0196182  0.388
2017 Varas M, Valdivieso C, Mauriaca C, Ortíz-Severín J, Paradela A, Poblete-Castro I, Cabrera R, Chávez FP. Multi-level evaluation of Escherichia coli polyphosphate related mutants using global transcriptomic, proteomic and phenomic analyses. Biochimica Et Biophysica Acta. PMID 28069396 DOI: 10.1016/J.Bbagen.2017.01.007  0.386
2016 Fuentealba M, Muñoz R, Maturana P, Krapp A, Cabrera R. Determinants of Cofactor Specificity for the Glucose-6-Phosphate Dehydrogenase from Escherichia coli: Simulation, Kinetics and Evolutionary Studies. Plos One. 11: e0152403. PMID 27010804 DOI: 10.1371/Journal.Pone.0152403  0.669
2015 Aguayo MF, Cáceres JC, Fuentealba M, Muñoz R, Stange C, Cabrera R, Handford M. Polyol specificity of recombinant Arabidopsis thaliana sorbitol dehydrogenase studied by enzyme kinetics and in silico modeling. Frontiers in Plant Science. 6: 91. PMID 25755662 DOI: 10.3389/Fpls.2015.00091  0.618
2014 Olavarria K, De Ingeniis J, Zielinski DC, Fuentealba M, Muñoz R, McCloskey D, Feist AM, Cabrera R. Metabolic impact of an NADH-producing glucose-6-phosphate dehydrogenase in Escherichia coli. Microbiology (Reading, England). 160: 2780-93. PMID 25246670 DOI: 10.1099/Mic.0.082180-0  0.616
2013 Baez M, Cabrera R, Pereira HM, Blanco A, Villalobos P, Ramírez-Sarmiento CA, Caniuguir A, Guixé V, Garratt RC, Babul J. A Ribokinase family conserved monovalent cation binding site enhances the MgATP-induced inhibition in E. coli phosphofructokinase-2 Biophysical Journal. 105: 185-193. PMID 23823238 DOI: 10.1016/J.Bpj.2013.05.028  0.746
2013 Aguayo MF, Ampuero D, Mandujano P, Parada R, Muñoz R, Gallart M, Altabella T, Cabrera R, Stange C, Handford M. Sorbitol dehydrogenase is a cytosolic protein required for sorbitol metabolism in Arabidopsis thaliana. Plant Science : An International Journal of Experimental Plant Biology. 205: 63-75. PMID 23498864 DOI: 10.1016/J.Plantsci.2013.01.012  0.56
2012 Alcaíno J, Fuentealba M, Cabrera R, Baeza M, Cifuentes V. Modeling the interfacial interactions between CrtS and CrtR from Xanthophyllomyces dendrorhous , a P450 system involved in astaxanthin production. Journal of Agricultural and Food Chemistry. 60: 8640-7. PMID 22897793 DOI: 10.1021/Jf302287F  0.343
2012 Olavarría K, Valdés D, Cabrera R. The cofactor preference of glucose-6-phosphate dehydrogenase from Escherichia coli--modeling the physiological production of reduced cofactors. The Febs Journal. 279: 2296-309. PMID 22519976 DOI: 10.1111/J.1742-4658.2012.08610.X  0.455
2011 Cabrera R, Baez M, Pereira HM, Caniuguir A, Garratt RC, Babul J. The crystal complex of phosphofructokinase-2 of Escherichia coli with fructose-6-phosphate: kinetic and structural analysis of the allosteric ATP inhibition. The Journal of Biological Chemistry. 286: 5774-83. PMID 21147773 DOI: 10.1074/Jbc.M110.163162  0.73
2010 Cabrera R, Babul J, Guixé V. Ribokinase family evolution and the role of conserved residues at the active site of the PfkB subfamily representative, Pfk-2 from Escherichia coli. Archives of Biochemistry and Biophysics. 502: 23-30. PMID 20599671 DOI: 10.1016/J.Abb.2010.06.024  0.746
2008 Cabrera R, Ambrosio ALB, Garratt RC, Guixé V, Babul J. Crystallographic Structure of Phosphofructokinase-2 from Escherichia coli in Complex with Two ATP Molecules. Implications for Substrate Inhibition Journal of Molecular Biology. 383: 588-602. PMID 18762190 DOI: 10.1016/J.Jmb.2008.08.029  0.785
2007 Baez M, Cabrera R, Guixé V, Babul J. Unfolding pathway of the dimeric and tetrameric forms of phosphofructokinase-2 from Escherichia coli Biochemistry. 46: 6141-6148. PMID 17469854 DOI: 10.1021/Bi7002247  0.765
2006 Cabrera R, Caniuguir A, Ambrosio ALB, Guixé V, Garratt RC, Babul J. Crystallization and preliminary crystallographic analysis of the tetrameric form of phosphofructokinase-2 from Escherichia coli, a member of the ribokinase family Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 62: 935-937. PMID 16946484 DOI: 10.1107/S1744309106032246  0.745
2006 Parducci RE, Cabrera R, Baez M, Guixé V. Evidence for a catalytic Mg2+ ion and effect of phosphate on the activity of Escherichia coli phosphofructokinase-2: Regulatory properties of a ribokinase family member Biochemistry. 45: 9291-9299. PMID 16866375 DOI: 10.1021/Bi060026O  0.723
2005 Caniuguir A, Cabrera R, Báez M, Vásquez CC, Babul J, Guixé V. Role of Cys-295 on subunit interactions and allosteric regulation of phosphofructokinase-2 from Escherichia coli Febs Letters. 579: 2313-2318. PMID 15848164 DOI: 10.1016/J.Febslet.2005.02.078  0.774
2003 Cabrera R, Fischer H, Trapani S, Craievich AF, Garratt RC, Guixé V, Babul J. Domain motions and quaternary packing of phosphofructokinase-2 from Escherichia coli studied by small angle x-ray scattering and homology modeling Journal of Biological Chemistry. 278: 12913-12919. PMID 12527754 DOI: 10.1074/Jbc.M212137200  0.765
2002 Cabrera R, Guixé V, Alfaro J, Rodríguez PH, Babul J. Ligand-dependent structural changes and limited proteolysis of Escherichia coli phosphofructokinase-2. Archives of Biochemistry and Biophysics. 406: 289-95. PMID 12361717 DOI: 10.1016/S0003-9861(02)00435-6  0.728
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