Jurgen Sygusch - Related publications

Affiliations: 
Faculte de medecine Université de Montréal, Montréal, Canada 
Area:
Molecular Biology, Biochemistry
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2021 Marshall AC, Bruning JB. Engineering potassium activation into biosynthetic thiolase. The Biochemical Journal. PMID 34338286 DOI: 10.1042/BCJ20210455   
2021 Sugiura S, Nakano S, Niwa M, Hasebe F, Matsui D, Ito S. Catalytic Mechanism of Ancestral L-Lysine Oxidase Assigned by Sequence Data Mining. The Journal of Biological Chemistry. 101043. PMID 34358565 DOI: 10.1016/j.jbc.2021.101043   
2021 Gerrard Wheeler MC, Arias CL, E Mello JDFR, Cirauqui Diaz N, Rodrigues CR, Drincovich MF, de Souza AMT, Alvarez CE. Structural insights into the allosteric site of Arabidopsis NADP-malic enzyme 2: role of the second sphere residues in the regulatory signal transmission. Plant Molecular Biology. PMID 34333694 DOI: 10.1007/s11103-021-01176-2   
2021 Wangpaiboon K, Laohawuttichai P, Kim SY, Mori T, Nakapong S, Pichyangkura R, Pongsawasdi P, Hakoshima T, Krusong K. A GH13 α-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallographica. Section D, Structural Biology. 77: 1064-1076. PMID 34342279 DOI: 10.1107/S205979832100677X   
2021 Martínez-Aldino IY, Villaseca-Murillo M, Morales-Jiménez J, Rivera-Chávez J. Absolute configuration and protein tyrosine phosphatase 1B inhibitory activity of xanthoepocin, a dimeric naphtopyrone from Penicillium sp. IQ-429. Bioorganic Chemistry. 115: 105166. PMID 34384957 DOI: 10.1016/j.bioorg.2021.105166   
2021 Zhang X, Huang Z, Wang D, Zhang Y, Eser BE, Gu Z, Dai R, Gao R, Guo Z. A new thermophilic extradiol dioxygenase promises biodegradation of catecholic pollutants. Journal of Hazardous Materials. 422: 126860. PMID 34399224 DOI: 10.1016/j.jhazmat.2021.126860   
2021 Pandey S, Mahanta P, Berger BW, Acharya R. Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473. The Journal of Biological Chemistry. 101014. PMID 34358563 DOI: 10.1016/j.jbc.2021.101014   
2021 Guo J, Wang Y, Gao W, Wang X, Gao X, Man Z, Cai Z, Qing Q. Gene Cloning, Functional Expression, and Characterization of a Novel GH46 Chitosanase from Streptomyces avermitilis (SaCsn46A). Applied Biochemistry and Biotechnology. PMID 34542822 DOI: 10.1007/s12010-021-03687-6   
2021 Bandyopadhyay A, Saxena AK. Structural and ATPase activity analysis of nucleotide binding domain of Rv3870 enzyme of M. tuberculosis ESX-1 system. International Journal of Biological Macromolecules. PMID 34428493 DOI: 10.1016/j.ijbiomac.2021.08.130   
2021 Mondal S, Thakur A, Fontes CMGA, Goyal A. A trimodular family 16 glycoside hydrolase from the cellulosome of displays highly specific licheninase (EC 3.2.1.73) activity. Microbiology (Reading, England). 167. PMID 34297654 DOI: 10.1099/mic.0.001055   
2021 James MO. Enzyme Kinetics of PAPS-Sulfotransferase. Methods in Molecular Biology (Clifton, N.J.). 2342: 285-300. PMID 34272699 DOI: 10.1007/978-1-0716-1554-6_11   
2021 James MO. Enzyme Kinetics of PAPS-Sulfotransferase. Methods in Molecular Biology (Clifton, N.J.). 2342: 285-300. PMID 34272699 DOI: 10.1007/978-1-0716-1554-6_11   
2021 Kummer MJ, Lee YS, Yuan M, Alkotaini B, Zhao J, Blumenthal E, Minteer SD. Substrate Channeling by a Rationally Designed Fusion Protein in a Biocatalytic Cascade. Jacs Au. 1: 1187-1197. PMID 34467357 DOI: 10.1021/jacsau.1c00180   
2021 Feehan R, Franklin MW, Slusky JSG. Machine learning differentiates enzymatic and non-enzymatic metals in proteins. Nature Communications. 12: 3712. PMID 34140507 DOI: 10.1038/s41467-021-24070-3   
2021 Feehan R, Franklin MW, Slusky JSG. Machine learning differentiates enzymatic and non-enzymatic metals in proteins. Nature Communications. 12: 3712. PMID 34140507 DOI: 10.1038/s41467-021-24070-3   
2021 Jia Q, Zeng H, Li H, Xiao N, Tang J, Gao S, Zhang J, Xie W. The C-terminal loop of guanosine deaminase is essential to catalysis. Chemical Communications (Cambridge, England). PMID 34477187 DOI: 10.1039/d1cc03042f   
2021 Darrouzet E, Rinaldi C, Zambelli B, Ciurli S, Cavazza C. Revisiting the CooJ family, a potential chaperone for nickel delivery to [NiFe]‑carbon monoxide dehydrogenase. Journal of Inorganic Biochemistry. 225: 111588. PMID 34530332 DOI: 10.1016/j.jinorgbio.2021.111588   
2021 Chao RR, Lau IC, Coleman T, Churchman LR, Child SA, Lee JHZ, Bruning JB, De Voss JJ, Bell SG. The stereoselective oxidation of para-substituted benzenes by a cytochrome P450 biocatalyst. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 34350662 DOI: 10.1002/chem.202102757   
2021 Padavattan S, Jos S, Gogoi H, Bagautdinov B. Crystal structure of enoyl-CoA hydratase from Thermus thermophilus HB8. Acta Crystallographica. Section F, Structural Biology Communications. 77: 148-155. PMID 33949975 DOI: 10.1107/S2053230X21004593   
2021 Bai Y, Parker EJ. Reciprocal allostery arising from a bi-enzyme assembly controls aromatic amino acid biosynthesis in Prevotella nigrescens. The Journal of Biological Chemistry. 101038. PMID 34343567 DOI: 10.1016/j.jbc.2021.101038   
2021 Currie MJ, Manjunath L, Horne CR, Rendle PM, Subramanian R, Friemann R, Fairbanks AJ, Muscroft-Taylor AC, North RA, Dobson RCJ. N-Acetylmannosamine-6-phosphate 2-epimerase uses a novel substrate-assisted mechanism to catalyze amino sugar epimerization. The Journal of Biological Chemistry. 101113. PMID 34437902 DOI: 10.1016/j.jbc.2021.101113   
2021 Ma J, Li Y, Han S, Jiang Z, Yan Q, Yang S. Structural and biochemical insights into the substrate-binding mechanism of a glycoside hydrolase family 12 β-1,3-1,4-glucanase from Chaetomium sp. Journal of Structural Biology. 107774. PMID 34329700 DOI: 10.1016/j.jsb.2021.107774   
2021 Bakunova AK, Nikolaeva AY, Rakitina TV, Isaikina TY, Khrenova MG, Boyko KM, Popov VO, Bezsudnova EY. The Uncommon Active Site of D-Amino Acid Transaminase from : Biochemical and Structural Insights into the New Enzyme. Molecules (Basel, Switzerland). 26. PMID 34443642 DOI: 10.3390/molecules26165053   
2021 Blain JM, Grote DL, Watkins SM, Goshu GM, Muller C, Gorman JL, Ranieri G, Walter RL, Hofstetter H, Horn JR, Hagen TJ. Structural and biophysical characterization of the Burkholderia pseudomallei IspF inhibitor L-tryptophan hydroxamate. Bioorganic & Medicinal Chemistry Letters. 48: 128273. PMID 34298132 DOI: 10.1016/j.bmcl.2021.128273   
2021 Nguyen TM, Goto M, Noda S, Matsutani M, Hodoya Y, Kataoka N, Adachi O, Matsushita K, Yakushi T. The 5-ketofructose reductase of sp. strain CHM43 is a novel class in the shikimate dehydrogenase family. Journal of Bacteriology. JB0055820. PMID 34309403 DOI: 10.1128/JB.00558-20   
2021 Marshall SA, Payne KAP, Fisher K, Titchiner GR, Levy C, Hay S, Leys D. UbiD domain dynamics underpins aromatic decarboxylation. Nature Communications. 12: 5065. PMID 34417452 DOI: 10.1038/s41467-021-25278-z   
2021 Aregbesola OA, Kumar A, Mokoena MP, Olaniran AO. Classic Pentachlorophenol Hydroxylating Phenylalanine 4-Monooxygenase from Indigenous Bacillus tropicus Strain AOA-CPS1: Cloning, Overexpression, Purification, Characterization and Structural Homology Modelling. Applied Biochemistry and Biotechnology. PMID 34417677 DOI: 10.1007/s12010-021-03645-2   
2021 Miranda-Rojas S, Blanco-Esperguez K, Tuñón I, Kästner J, Mendizábal F. Exploration of the Activation Mechanism of the Epigenetic Regulator MLL3: A QM/MM Study. Biomolecules. 11. PMID 34356675 DOI: 10.3390/biom11071051   
2021 Singh A, Fenwick RB, Dyson HJ, Wright PE. Role of Active Site Loop Dynamics in Mediating Ligand Release from Dihydrofolate Reductase. Biochemistry. PMID 34428034 DOI: 10.1021/acs.biochem.1c00461   
2021 Gabrielli V, Muñoz-García JC, Pergolizzi G, de Andrade P, Khimyak Y, Field RA, Angulo J. Molecular recognition of natural and non-natural substrates by cellodextrin phosphorylase from Ruminiclostridium thermocellum investigated by NMR spectroscopy. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 34436794 DOI: 10.1002/chem.202102039   
2021 Watson RA, Offenbacher AR, Barry BA. Detection of Catalytically Linked Conformational Changes in Wild-Type Class Ia Ribonucleotide Reductase Using Reaction-Induced FTIR Spectroscopy. The Journal of Physical Chemistry. B. PMID 34289692 DOI: 10.1021/acs.jpcb.1c03038   
2021 Yildiz I. Computational Analysis of the Nicotine Oxidoreductase Mechanism by the ONIOM Method. Acs Omega. 6: 22422-22428. PMID 34497931 DOI: 10.1021/acsomega.1c03357   
2021 Cheng F, Zhai QY, Gao XF, Liu HT, Qiu S, Wang YJ, Zheng YG. Tuning enzymatic properties by protein engineering toward catalytic tetrad of carbonyl reductase. Biotechnology and Bioengineering. PMID 34436762 DOI: 10.1002/bit.27925   
2021 Gentile K, Bhide A, Kauffman J, Ghosh S, Maiti S, Adair J, Lee TH, Sen A. Enzyme aggregation and fragmentation induced by catalysis relevant species. Physical Chemistry Chemical Physics : Pccp. PMID 34516596 DOI: 10.1039/d1cp02966e   
2021 Atasever Arslan B, Kaya B, Şahin O, Baday S, Saylan CC, Ülküseven B. The iron(III) and nickel(II) complexes with tetradentate thiosemicarbazones. Synthesis, experimental, theoretical characterization, and antiviral effect against SARS-CoV-2. Journal of Molecular Structure. 1246: 131166. PMID 34316082 DOI: 10.1016/j.molstruc.2021.131166   
2021 Hu R, Cui R, Tang Q, Lan D, Wang F, Wang Y. Enhancement of Phospholipid Binding and Catalytic Efficiency of Phospholipase D by Increasing Hydrophobicity of the Active Site Loop. Journal of Agricultural and Food Chemistry. PMID 34516129 DOI: 10.1021/acs.jafc.1c04078   
2021 Korasick DA, Christgen SL, Qureshi IA, Becker DF, Tanner JJ. Probing the function of a ligand-modulated dynamic tunnel in bifunctional proline utilization A (PutA). Archives of Biochemistry and Biophysics. 109025. PMID 34506758 DOI: 10.1016/j.abb.2021.109025   
2021 Ding N, Zhao B, Ban X, Li C, Venkataram Prasad BV, Gu Z, Li Z. Carbohydrate-Binding Module and Linker Allow Cold Adaptation and Salt Tolerance of Maltopentaose-Forming Amylase From Marine Bacterium 2-40 . Frontiers in Microbiology. 12: 708480. PMID 34335544 DOI: 10.3389/fmicb.2021.708480   
2021 Moses ME, Lund PM, Bohr SS, Iversen JF, Kæstel-Hansen J, Kallenbach AS, Iversen L, Christensen SM, Hatzakis NS. Single-Molecule Study of Lipase in a Detergency Application System Reveals Diffusion Pattern Remodeling by Surfactants and Calcium. Acs Applied Materials & Interfaces. 13: 33704-33712. PMID 34235926 DOI: 10.1021/acsami.1c08809   
2021 Gyebi GA, Elfiky AA, Ogunyemi OM, Ibrahim IM, Adegunloye AP, Adebayo JO, Olaiya CO, Ocheje JO, Fabusiwa MM. Structure-based virtual screening suggests inhibitors of 3-Chymotrypsin-Like Protease of SARS-CoV-2 from Vernonia amygdalina and Occinum gratissimum. Computers in Biology and Medicine. 136: 104671. PMID 34332348 DOI: 10.1016/j.compbiomed.2021.104671   
2021 DeLaney C, Sheng Y, Pectol DC, Vantansever E, Zhang H, Bhuvanesh N, Salas I, Liu WR, Fierke CF, Darensbourg MY. Zinc thiotropolone combinations as inhibitors of the SARS-CoV-2 main protease. Dalton Transactions (Cambridge, England : 2003). PMID 34396374 DOI: 10.1039/d1dt02499j   
2021 Schmidt-Engler JM, von Berg S, Bredenbeck J. Temperature-Dependent Low-Frequency Modes in the Active Site of Bovine Carbonic Anhydrase II Probed by 2D-IR Spectroscopy. The Journal of Physical Chemistry Letters. 7777-7782. PMID 34374547 DOI: 10.1021/acs.jpclett.1c01453   
2021 Jeter VL, Escalante-Semerena JC. Sirtuin-dependent reversible lysine acetylation controls the activity of acetyl-Coenzyme A synthetase in . Journal of Bacteriology. JB0033321. PMID 34309396 DOI: 10.1128/JB.00333-21   
2021 Douglas CD, Grandinetti L, Easton NM, Kuehm OP, Hayden JA, Hamilton MC, St Maurice M, Bearne SL. Slow-Onset, Potent Inhibition of Mandelate Racemase by 2-Formylphenylboronic Acid. An Unexpected Adduct Clasps with the Catalytic Machinery. Biochemistry. PMID 34339165 DOI: 10.1021/acs.biochem.1c00374   
2021 Li Q, Pan Y, Li H, Lenertz M, Reed K, Jordahl D, Bjerke T, Ugrinov A, Chen B, Yang Z. Cascade/Parallel Biocatalysis via Multi-enzyme Encapsulation on Metal-Organic Materials for Rapid and Sustainable Biomass Degradation. Acs Applied Materials & Interfaces. PMID 34478257 DOI: 10.1021/acsami.1c12209   
2021 Sirota FL, Maurer-Stroh S, Li Z, Eisenhaber F, Eisenhaber B. Functional Classification of Super-Large Families of Enzymes Based on Substrate Binding Pocket Residues for Biocatalysis and Enzyme Engineering Applications. Frontiers in Bioengineering and Biotechnology. 9: 701120. PMID 34409021 DOI: 10.3389/fbioe.2021.701120   
2021 Yu Q, Ni D, Kowal J, Manolaridis I, Jackson SM, Stahlberg H, Locher KP. Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism. Nature Communications. 12: 4376. PMID 34282134 DOI: 10.1038/s41467-021-24651-2   
2021 Yu Q, Ni D, Kowal J, Manolaridis I, Jackson SM, Stahlberg H, Locher KP. Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism. Nature Communications. 12: 4376. PMID 34282134 DOI: 10.1038/s41467-021-24651-2   
2021 Chakraborty K, Dhara S. Conoidecyclics A-C from marine macroalga Turbinaria conoides: Newly described natural macrolides with prospective bioactive properties. Phytochemistry. 191: 112909. PMID 34419665 DOI: 10.1016/j.phytochem.2021.112909   
2021 Waidha K, Zurgil U, Ben-Zeev E, Gopas J, Rajendran S, Golan-Goldhirsh A. Inhibition of Cysteine Proteases by 6,6'-Dihydroxythiobinupharidine (DTBN) from . Molecules (Basel, Switzerland). 26. PMID 34443335 DOI: 10.3390/molecules26164743