Wely Floriano - Publications

Affiliations: 
Chemistry Lakehead University (Canada) 
Area:
General Chemistry, Biochemistry, Analytical Chemistry

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Dragneva N, Rubel O, Floriano WB. Molecular Dynamics of Fibrinogen Adsorption onto Graphene, but Not onto Poly(ethylene glycol) Surface, Increases Exposure of Recognition Sites That Trigger Immune Response. Journal of Chemical Information and Modeling. 56: 706-20. PMID 26966807 DOI: 10.1021/acs.jcim.5b00703  0.96
2015 Dadgar S, Floriano WB. Systematic discovery of molecular probes targeting multiple non-orthosteric and spatially distinct sites in the botulinum neurotoxin subtype A (BoNT/A). Molecular and Cellular Probes. 29: 135-43. PMID 25745992 DOI: 10.1016/j.mcp.2015.02.002  0.96
2015 Kamstra RL, Freywald A, Floriano WB. N-(2,4)-dinitrophenyl-L-arginine Interacts with EphB4 and Functions as an EphB4 Kinase Modulator. Chemical Biology & Drug Design. 86: 476-86. PMID 25581780 DOI: 10.1111/cbdd.12510  0.96
2015 Chen DE, Willick DL, Ruckel JB, Floriano WB. Principal component analysis of binding energies for single-point mutants of hT2R16 bound to an agonist correlate with experimental mutant cell response. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 22: 37-53. PMID 25393978 DOI: 10.1089/cmb.2014.0192  0.96
2014 Kamstra RL, Floriano WB. Identifying potential selective fluorescent probes for cancer-associated protein carbonic anhydrase IX using a computational approach. Journal of Molecular Graphics & Modelling. 54: 184-93. PMID 25459770 DOI: 10.1016/j.jmgm.2014.10.010  0.96
2014 Kamstra RL, Dadgar S, Wigg J, Chowdhury MA, Phenix CP, Floriano WB. Creating and virtually screening databases of fluorescently-labelled compounds for the discovery of target-specific molecular probes. Journal of Computer-Aided Molecular Design. 28: 1129-42. PMID 25150502 DOI: 10.1007/s10822-014-9789-0  0.96
2014 Stauffer D, Dragneva N, Floriano WB, Mawhinney RC, Fanchini G, French S, Rubel O. An atomic charge model for graphene oxide for exploring its bioadhesive properties in explicit water. The Journal of Chemical Physics. 141: 044705. PMID 25084935 DOI: 10.1063/1.4890503  0.96
2014 Sheikholeslami S, Pandey RB, Dragneva N, Floriano W, Rubel O, Barr SA, Kuang Z, Berry R, Naik R, Farmer B. Binding of solvated peptide (EPLQLKM) with a graphene sheet via simulated coarse-grained approach. The Journal of Chemical Physics. 140: 204901. PMID 24880319 DOI: 10.1063/1.4876716  0.96
2013 Dragneva N, Floriano WB, Stauffer D, Mawhinney RC, Fanchini G, Rubel O. Favorable adsorption of capped amino acids on graphene substrate driven by desolvation effect Journal of Chemical Physics. 139. PMID 24206326 DOI: 10.1063/1.4828437  0.96
2013 Dadgar S, Ramjan Z, Floriano WB. Paclitaxel is an inhibitor and its boron dipyrromethene derivative is a fluorescent recognition agent for botulinum neurotoxin subtype A. Journal of Medicinal Chemistry. 56: 2791-803. PMID 23484537 DOI: 10.1021/jm301829h  0.96
2011 Bachmanov AA, Bosak NP, Floriano WB, Inoue M, Li X, Lin C, Murovets VO, Reed DR, Zolotarev VA, Beauchamp GK. Genetics of sweet taste preferences. Flavour and Fragrance Journal. 26: 286-294. PMID 21743773 DOI: 10.1002/ffj.2074  0.96
2011 Li X, Bachmanov AA, Maehashi K, Li W, Lim R, Brand JG, Beauchamp GK, Reed DR, Thai C, Floriano WB. Sweet taste receptor gene variation and aspartame taste in primates and other species. Chemical Senses. 36: 453-75. PMID 21414996 DOI: 10.1093/chemse/bjq145  0.96
2008 Floriano WB. A portable bioinformatics course for upper-division undergraduate curriculum in sciences. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 36: 325-35. PMID 21591215 DOI: 10.1002/bmb.20217  0.96
2008 Ramjan ZH, Raheja A, Floriano WB. A cluster-aware graphical user interface for a virtual ligand screening tool. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2008: 4102-5. PMID 19163614 DOI: 10.1109/IEMBS.2008.4650111  0.96
2007 Floriano WB, Domont GB, Nascimento MA. A molecular dynamics study of the correlations between solvent-accessible surface, molecular volume, and folding state. The Journal of Physical Chemistry. B. 111: 1893-9. PMID 17261064 DOI: 10.1021/jp066978l  0.96
2006 Vaidehi N, Schlyer S, Trabanino RJ, Floriano WB, Abrol R, Sharma S, Kochanny M, Koovakat S, Dunning L, Liang M, Fox JM, de Mendonça FL, Pease JE, Goddard WA, Horuk R. Predictions of CCR1 chemokine receptor structure and BX 471 antagonist binding followed by experimental validation. The Journal of Biological Chemistry. 281: 27613-20. PMID 16837468 DOI: 10.1074/jbc.M601389200  0.96
2006 Floriano WB, Hall S, Vaidehi N, Kim U, Drayna D, Goddard WA. Modeling the human PTC bitter-taste receptor interactions with bitter tastants. Journal of Molecular Modeling. 12: 931-41. PMID 16607493 DOI: 10.1007/s00894-006-0102-6  0.96
2005 Hummel P, Vaidehi N, Floriano WB, Hall SE, Goddard WA. Test of the Binding Threshold Hypothesis for olfactory receptors: explanation of the differential binding of ketones to the mouse and human orthologs of olfactory receptor 912-93. Protein Science : a Publication of the Protein Society. 14: 703-10. PMID 15722446 DOI: 10.1110/ps.041119705  0.96
2005 Cho AE, Wendel JA, Vaidehi N, Kekenes-Huskey PM, Floriano WB, Maiti PK, Goddard WA. The MPSim-Dock hierarchical docking algorithm: application to the eight trypsin inhibitor cocrystals. Journal of Computational Chemistry. 26: 48-71. PMID 15529328 DOI: 10.1002/jcc.20118  0.96
2004 Hall SE, Floriano WB, Vaidehi N, Goddard WA. Predicted 3-D structures for mouse I7 and rat I7 olfactory receptors and comparison of predicted odor recognition profiles with experiment. Chemical Senses. 29: 595-616. PMID 15337685 DOI: 10.1093/chemse/bjh063  0.96
2004 Floriano WB, Vaidehi N, Goddard WA. Making sense of olfaction through predictions of the 3-D structure and function of olfactory receptors. Chemical Senses. 29: 269-90. PMID 15150141 DOI: 10.1093/chemse/bjh030  0.96
2004 Trabanino RJ, Hall SE, Vaidehi N, Floriano WB, Kam VW, Goddard WA. First principles predictions of the structure and function of g-protein-coupled receptors: validation for bovine rhodopsin. Biophysical Journal. 86: 1904-21. PMID 15041637 DOI: 10.1016/S0006-3495(04)74256-3  0.96
2004 Kalani MY, Vaidehi N, Hall SE, Trabanino RJ, Freddolino PL, Kalani MA, Floriano WB, Kam VW, Goddard WA. The predicted 3D structure of the human D2 dopamine receptor and the binding site and binding affinities for agonists and antagonists. Proceedings of the National Academy of Sciences of the United States of America. 101: 3815-20. PMID 14999101 DOI: 10.1073/pnas.0400100101  0.96
2004 Freddolino PL, Kalani MY, Vaidehi N, Floriano WB, Hall SE, Trabanino RJ, Kam VW, Goddard WA. Predicted 3D structure for the human beta 2 adrenergic receptor and its binding site for agonists and antagonists. Proceedings of the National Academy of Sciences of the United States of America. 101: 2736-41. PMID 14981238 DOI: 10.1073/pnas.0308751101  0.96
2004 Floriano WB, Vaidehi N, Zamanakos G, Goddard WA. HierVLS hierarchical docking protocol for virtual ligand screening of large-molecule databases. Journal of Medicinal Chemistry. 47: 56-71. PMID 14695820 DOI: 10.1021/jm030271v  0.96
2004 Floriano WB, Nascimento MAC. Dielectric constant and density of water as a function of pressure at constant temperature Brazilian Journal of Physics. 34: 38-41.  0.96
2003 Datta D, Vaidehi N, Floriano WB, Kim KS, Prasadarao NV, Goddard WA. Interaction of E. coli outer-membrane protein A with sugars on the receptors of the brain microvascular endothelial cells. Proteins. 50: 213-21. PMID 12486715 DOI: 10.1002/prot.10257  0.96
2003 Kekenes-Huskey PM, Vaidehi N, Floriano WB, Goddard WA. Fidelity of phenylalanyl-tRNA synthetase in binding the natural amino acids Journal of Physical Chemistry B. 107: 11549-11557.  0.96
2002 Vaidehi N, Floriano WB, Trabanino R, Hall SE, Freddolino P, Choi EJ, Zamanakos G, Goddard WA. Prediction of structure and function of G protein-coupled receptors. Proceedings of the National Academy of Sciences of the United States of America. 99: 12622-7. PMID 12351677 DOI: 10.1073/pnas.122357199  0.96
2001 Goddard WA, Cagin T, Blanco M, Vaidehi N, Dasgupta S, Floriano W, Belmares M, Kua J, Zamanakos G, Kashihara S, Iotov M, Gao G. Strategies for multiscale modeling and simulations of organic materials: Polymers and biopolymers Computational and Theoretical Polymer Science. 11: 329-343. DOI: 10.1016/S1089-3156(01)00025-3  0.96
2000 Floriano WB, Vaidehi N, Goddard WA, Singer MS, Shepherd GM. Molecular mechanisms underlying differential odor responses of a mouse olfactory receptor. Proceedings of the National Academy of Sciences of the United States of America. 97: 10712-6. PMID 11005853  0.96
1999 Melo A, Ramos MJ, Floriano WB, Gomes JANF, Leao JFR, Magalhaes AL, Maigret B, Nascimento MC, Reuter N. Theoretical study of arginine-carboxylate interactions Journal of Molecular Structure: Theochem. 463: 81-90. DOI: 10.1016/S0166-1280(98)00396-0  0.96
1999 Ramos MJ, Melo A, Henriques ES, Gomes JANF, Reuter N, Maigret B, Floriano WB, Nascimento MAC. Modeling enzyme-inhibitor interactions in serine proteases International Journal of Quantum Chemistry. 74: 299-314.  0.96
1998 Floriano WB, Nascimento MA, Domont GB, Goddard WA. Effects of pressure on the structure of metmyoglobin: molecular dynamics predictions for pressure unfolding through a molten globule intermediate. Protein Science : a Publication of the Protein Society. 7: 2301-13. PMID 9827996 DOI: 10.1002/pro.5560071107  0.96
1997 Pires JM, Floriano WB, Gaudio AC. Extension of the frontier reactivity indices to groups of atoms and application to quantitative structure-activity relationship studies Journal of Molecular Structure: Theochem. 389: 159-167.  0.96
1995 Floriano WB, Blaszkowski SR, Nascimento MAC. A generalized multistructural description of the ground state of ozone and water molecules Journal of Molecular Structure: Theochem. 335: 51-57. DOI: 10.1016/0166-1280(94)03982-Q  0.96
1994 Silva JT, Vericimo MA, Floriano WB, Dutra MB, Panek AD. On the Hsp26 of Saccharomyces cerevisiae Biochemistry and Molecular Biology International. 33: 211-220. PMID 7951041  0.96
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