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Olga V. Boudker, Ph.D. - Publications

Affiliations: 
2000 Johns Hopkins University, Baltimore, MD 
 2005- Physiology and Biophysics Weill Cornell Medical College, New York, NY, United States 
Area:
Molecular Biology
Website:
http://physiology.med.cornell.edu/faculty/profile.php?id=boudker
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56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Wang X, Rusinova R, Gregorio GG, Boudker O. FREE FATTY ACIDS INHIBIT AN ION-COUPLED MEMBRANE TRANSPORTER BY DISSIPATING THE ION GRADIENT. The Journal of Biological Chemistry. 107955. PMID 39491650 DOI: 10.1016/j.jbc.2024.107955  0.475
2024 Qiu B, Boudker O. Structural basis of the excitatory amino acid transporter 3 substrate recognition. Biorxiv : the Preprint Server For Biology. PMID 39282329 DOI: 10.1101/2024.09.05.611541  0.491
2024 Jiang Y, Miyagi A, Wang X, Qiu B, Boudker O, Scheuring S. HS-AFM single-molecule structural biology uncovers basis of transporter wanderlust kinetics. Nature Structural & Molecular Biology. PMID 38632360 DOI: 10.1038/s41594-024-01260-3  0.436
2024 Drew D, Boudker O. Ion and lipid orchestration of secondary active transport. Nature. 626: 963-974. PMID 38418916 DOI: 10.1038/s41586-024-07062-3  0.494
2024 Fortea E, Lee S, Chadda R, Argyros Y, Sandal P, Mahoney-Kruszka R, Ciftci HD, Falzone ME, Huysmans G, Robertson JL, Boudker O, Accardi A. Author Correction: Structural basis of pH-dependent activation in a CLC transporter. Nature Structural & Molecular Biology. PMID 38355726 DOI: 10.1038/s41594-024-01242-5  0.379
2024 Fortea E, Lee S, Chadda R, Argyros Y, Sandal P, Mahoney-Kruszka R, Ciftici D, Falzone ME, Huysmans G, Robertson JL, Boudker O, Accardi A. Structural basis of pH-dependent activation in a CLC transporter. Nature Structural & Molecular Biology. PMID 38279055 DOI: 10.1038/s41594-023-01210-5  0.322
2023 Reddy KD, Rasool B, Akher FB, Kutlešić N, Pant S, Boudker O. Uncoupled substrate binding underlies the evolutionary switch between Na and H -coupled prokaryotic aspartate transporters. Biorxiv : the Preprint Server For Biology. PMID 38106174 DOI: 10.1101/2023.12.03.569786  0.559
2023 Qiu B, Boudker O. Symport and antiport mechanisms of human glutamate transporters. Nature Communications. 14: 2579. PMID 37142617 DOI: 10.1038/s41467-023-38120-5  0.416
2022 Reddy KD, Ciftci D, Scopelliti AJ, Boudker O. The archaeal glutamate transporter homologue GltPh shows heterogeneous substrate binding. The Journal of General Physiology. 154. PMID 35452090 DOI: 10.1085/jgp.202213131  0.556
2021 Ciftci D, Martens C, Ghani VG, Blanchard SC, Politis A, Huysmans GHM, Boudker O. Linking function to global and local dynamics in an elevator-type transporter. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34873050 DOI: 10.1073/pnas.2025520118  0.75
2021 Ciftci D, Huysmans GHM, Wang X, He C, Terry D, Zhou Z, Fitzgerald G, Blanchard SC, Boudker O. FRET-based Microscopy Assay to Measure Activity of Membrane Amino Acid Transporters with Single-transporter Resolution. Bio-Protocol. 11: e3970. PMID 33889664 DOI: 10.21769/BioProtoc.3970  0.774
2021 Qiu B, Matthies D, Fortea E, Yu Z, Boudker O. Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport. Science Advances. 7. PMID 33658209 DOI: 10.1126/sciadv.abf5814  0.555
2020 Huysmans GHM, Ciftci D, Wang X, Blanchard SC, Boudker O. The high-energy transition state of the glutamate transporter homologue GltPh. The Embo Journal. e105415. PMID 33185289 DOI: 10.15252/embj.2020105415  0.728
2020 Wang X, Boudker O. Large domain movements through the lipid bilayer mediate substrate release and inhibition of glutamate transporters. Elife. 9. PMID 33155546 DOI: 10.7554/eLife.58417  0.506
2020 Matin TR, Heath GR, Huysmans GHM, Boudker O, Scheuring S. Millisecond dynamics of an unlabeled amino acid transporter. Nature Communications. 11: 5016. PMID 33024106 DOI: 10.1038/s41467-020-18811-z  0.554
2020 Ciftci D, Huysmans GHM, Wang X, He C, Terry D, Zhou Z, Fitzgerald G, Blanchard SC, Boudker O. Single-molecule transport kinetics of a glutamate transporter homolog shows static disorder. Science Advances. 6: eaaz1949. PMID 32523985 DOI: 10.1126/Sciadv.Aaz1949  0.776
2020 Huang Y, Wang X, Lv G, Razavi AM, Huysmans GHM, Weinstein H, Bracken C, Eliezer D, Boudker O. Use of paramagnetic F NMR to monitor domain movement in a glutamate transporter homolog. Nature Chemical Biology. PMID 32514183 DOI: 10.1038/S41589-020-0561-6  0.5
2020 Wang X, Boudker O. Wag-the-dog Mechanism of Gating in Glutamate Transporters Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.286  0.61
2020 Matthies D, Qiu B, Bae C, Perozo E, Swartz K, Subramaniam S, Boudker O, Yu Z. Single-particle Cryo-EM of Membrane Proteins - Success Stories and Current Challenges Biophysical Journal. 118: 13a. DOI: 10.1016/J.Bpj.2019.11.253  0.319
2019 Reddy K, Boudker O. Evolution of Ion Specificity in Glutamate Transporters Biophysical Journal. 116: 556a-557a. DOI: 10.1016/J.Bpj.2018.11.2993  0.572
2019 Wang X, Gregorio GG, Blanchard SC, Boudker O. Modulation of Glutamate Transporter Gltph by Arachidonic Acid Homologues Biophysical Journal. 116: 347a. DOI: 10.1016/J.Bpj.2018.11.1889  0.713
2018 Oh S, Boudker O. Kinetic mechanism of coupled binding in sodium-aspartate symporter GltPh. Elife. 7. PMID 30255846 DOI: 10.7554/Elife.37291  0.473
2018 Riederer EA, Focke PJ, Georgieva ER, Akyuz N, Matulef K, Borbat PP, Freed JH, Blanchard SC, Boudker O, Valiyaveetil FI. A facile approach for the i assembly of multimeric membrane transport proteins. Elife. 7. PMID 29889023 DOI: 10.7554/Elife.36478  0.791
2018 Jentsch JA, Kiburu I, Pandey K, Timme M, Ramlall T, Levkau B, Wu J, Eliezer D, Boudker O, Menon AK. Structural basis of sterol binding and transport by a yeast StARkin domain. The Journal of Biological Chemistry. PMID 29463678 DOI: 10.1074/Jbc.Ra118.001881  0.593
2018 Scopelliti AJ, Font J, Vandenberg RJ, Boudker O, Ryan RM. Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5. Nature Communications. 9: 38. PMID 29295993 DOI: 10.1038/S41467-017-02444-W  0.525
2018 Oh S, Boudker O. Author response: Kinetic mechanism of coupled binding in sodium-aspartate symporter GltPh Elife. DOI: 10.7554/Elife.37291.025  0.336
2018 Riederer EA, Focke PJ, Georgieva ER, Akyuz N, Matulef K, Borbat PP, Freed JH, Blanchard SC, Boudker O, Valiyaveetil FI. Author response: A facile approach for the in vitro assembly of multimeric membrane transport proteins Elife. DOI: 10.7554/Elife.36478.015  0.753
2017 Ruan Y, Miyagi A, Wang X, Chami M, Boudker O, Scheuring S. Direct visualization of glutamate transporter elevator mechanism by high-speed AFM. Proceedings of the National Academy of Sciences of the United States of America. PMID 28137870 DOI: 10.1073/Pnas.1616413114  0.678
2016 Drew D, Boudker O. Shared Molecular Mechanisms of Membrane Transporters. Annual Review of Biochemistry. 85: 543-72. PMID 27023848 DOI: 10.1146/Annurev-Biochem-060815-014520  0.563
2016 Ruan Y, Miyagi A, Wang X, Chami M, Stahlberg H, Boudker O, Scheuring S. Direct Visualization of Glutamate Transporter Transport Cycle Biophysical Journal. 110: 178a-179a. DOI: 10.1016/J.Bpj.2015.11.996  0.67
2015 Aseervatham J, Tran L, Machaca K, Boudker O. The Role of Flexible Loops in Folding, Trafficking and Activity of Equilibrative Nucleoside Transporters. Plos One. 10: e0136779. PMID 26406980 DOI: 10.1371/Journal.Pone.0136779  0.651
2015 Boudker O, Oh S. Isothermal titration calorimetry of ion-coupled membrane transporters. Methods (San Diego, Calif.). 76: 171-82. PMID 25676707 DOI: 10.1016/J.Ymeth.2015.01.012  0.507
2015 Akyuz N, Georgieva ER, Zhou Z, Stolzenberg S, Cuendet MA, Khelashvili G, Altman RB, Terry DS, Freed JH, Weinstein H, Boudker O, Blanchard SC. Transport domain unlocking sets the uptake rate of an aspartate transporter. Nature. 518: 68-73. PMID 25652997 DOI: 10.1038/Nature14158  0.796
2015 Akyuz N, Georgieva E, Zhou Z, Stolzenberg S, Cuendet M, Khelashvili G, Altman RB, Terry DS, Freed JH, Weinstein H, Boudker O, Blanchard SC. Transport domain motions in a glutamate transporter homologue determine turnover rate Nature. DOI: 10.2210/Pdb4X2S/Pdb  0.784
2015 Oh S, Boudker O. Reconstitution of Potassium-Coupled Substrate Transport in an Archaeal Homologue of Glutamate Transporters Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.2511  0.529
2015 Boudker O. The Structural and Dynamic Basis of Ion-Coupled Substrate Uptake by a Glutamate Transporter Homologue Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.1099  0.611
2014 Verdon G, Oh S, Serio RN, Boudker O. Coupled ion binding and structural transitions along the transport cycle of glutamate transporters. Elife. 3: e02283. PMID 24842876 DOI: 10.7554/Elife.02283  0.662
2014 Verdon G, Oh S, Serio RN, Boudker O. Author response: Coupled ion binding and structural transitions along the transport cycle of glutamate transporters Elife. DOI: 10.7554/Elife.02283.029  0.636
2013 Akyuz N, Altman RB, Blanchard SC, Boudker O. Transport dynamics in a glutamate transporter homologue. Nature. 502: 114-8. PMID 23792560 DOI: 10.1038/Nature12265  0.803
2013 Ginter C, Kiburu I, Boudker O. Chemical catalysis by the translocator protein (18 kDa). Biochemistry. 52: 3609-11. PMID 23651039 DOI: 10.1021/Bi400364Z  0.319
2013 Reyes N, Oh S, Boudker O. Binding thermodynamics of a glutamate transporter homolog. Nature Structural & Molecular Biology. 20: 634-40. PMID 23563139 DOI: 10.1038/Nsmb.2548  0.622
2013 Georgieva ER, Borbat PP, Ginter C, Freed JH, Boudker O. Conformational ensemble of the sodium-coupled aspartate transporter. Nature Structural & Molecular Biology. 20: 215-21. PMID 23334289 DOI: 10.1038/Nsmb.2494  0.532
2013 Oh S, Boudker O. Arginine Movement in Synergistic Coupling of Substrate and Ion Binding to Glutamate Transporter Homologue Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.3465  0.562
2013 Stolzenberg S, Boudker O, Weinstein H. Mechanistic Insights from Modeling the Substrate Translocation Path of the Bacterial Glutamate Transporter Homologue GltPh Biophysical Journal. 104: 199a-200a. DOI: 10.1016/J.Bpj.2012.11.1127  0.488
2012 Verdon G, Boudker O. Crystal structure of an asymmetric trimer of a bacterial glutamate transporter homolog. Nature Structural & Molecular Biology. 19: 355-7. PMID 22343718 DOI: 10.1038/Nsmb.2233  0.606
2012 Oh S, Reyes N, Boudker O. Substrate and Sodium Binding Energetics to a ``Straight-Jacketed'' Glutamate Transporter Homologue Biophysical Journal. 102: 519. DOI: 10.1016/J.Bpj.2011.11.2838  0.551
2011 Verdon G, Boudker O. Crystal Structure of a Trimeric Sodium/Aspartate Symporter with Protomers in Mixed Outward- and Inward-Facing States Biophysical Journal. 100: 362a. DOI: 10.1016/J.Bpj.2010.12.2167  0.616
2011 Reyes N, Boudker O. Substrate and Inhibitor Binding to a Glutamate Transporter Homologue Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.1570  0.588
2010 Boudker O, Verdon G. Structural perspectives on secondary active transporters. Trends in Pharmacological Sciences. 31: 418-26. PMID 20655602 DOI: 10.1016/J.Tips.2010.06.004  0.662
2010 Boudker O. Alternating Access Mechanism of Glutamate Transporters Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.1140  0.7
2009 Reyes N, Ginter C, Boudker O. Transport mechanism of a bacterial homologue of glutamate transporters. Nature. 462: 880-5. PMID 19924125 DOI: 10.1038/Nature08616  0.663
2009 Reyes N, Ginter CS, Boudker O. Substrate-Dependent Conformational Changes of a Glutamate Transporter Homologue Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.2858  0.621
2007 Boudker O, Ryan RM, Yernool D, Shimamoto K, Gouaux E. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter. Nature. 445: 387-93. PMID 17230192 DOI: 10.1038/Nature05455  0.534
2004 Yernool D, Boudker O, Jin Y, Gouaux E. Structure of a glutamate transporter homologue from Pyrococcus horikoshii. Nature. 431: 811-8. PMID 15483603 DOI: 10.1038/Nature03018  0.684
2003 Yernool D, Boudker O, Folta-Stogniew E, Gouaux E. Trimeric subunit stoichiometry of the glutamate transporters from Bacillus caldotenax and Bacillus stearothermophilus. Biochemistry. 42: 12981-8. PMID 14596613 DOI: 10.1021/Bi030161Q  0.692
2000 Keyhani NO, Boudker O, Roseman S. Isolation and characterization of IIAChb, a soluble protein of the enzyme II complex required for the transport/phosphorylation of N, N'-diacetylchitobiose in Escherichia coli. The Journal of Biological Chemistry. 275: 33091-101. PMID 10913118 DOI: 10.1074/Jbc.M001044200  0.31
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