| Year |
Citation |
Score |
| 2023 |
Zhang D, Zhou G, Thongda W, Li C, Ye Z, Zhao H, Beck BH, Mohammed H, Peatman E. Early divergent responses to virulent and attenuated vaccine isolates of Flavobacterium covae sp. nov. In channel catfish, Ictalurus punctatus. Fish & Shellfish Immunology. 109248. PMID 38030028 DOI: 10.1016/j.fsi.2023.109248 |
0.645 |
|
| 2022 |
Zhang D, Mohammed H, Ye Z, Rhodes MA, Thongda W, Zhao H, Jescovitch LN, Fuller SA, Davis DA, Peatman E. Transcriptomic profiles of Florida pompano (Trachinotus carolinus) gill following infection by the ectoparasite Amyloodiniumocellatum. Fish & Shellfish Immunology. 125: 171-179. PMID 35569776 DOI: 10.1016/j.fsi.2022.05.017 |
0.678 |
|
| 2021 |
Silliman K, Zhao H, Justice M, Thongda W, Bowen B, Peatman E. Complex introgression among three diverged largemouth bass lineages. Evolutionary Applications. 14: 2815-2830. PMID 34950231 DOI: 10.1111/eva.13314 |
0.628 |
|
| 2020 |
Lange MD, Abernathy J, Shoemaker CA, Zhang D, Kirby A, Peatman E, Beck BH. Proteome analysis of virulent Aeromonas hydrophila reveals the upregulation of iron acquisition systems in the presence of a xenosiderophore. Fems Microbiology Letters. PMID 33045069 DOI: 10.1093/femsle/fnaa169 |
0.677 |
|
| 2020 |
Zhao H, Beck B, Fuller A, Peatman E. EasyParallel: A GUI platform for parallelization of STRUCTURE and NEWHYBRIDS analyses. Plos One. 15: e0232110. PMID 32330179 DOI: 10.1371/Journal.Pone.0232110 |
0.608 |
|
| 2020 |
Myers JN, Dyce PW, Chatakondi NG, Gorman SA, Quiniou SMA, Su B, Peatman E, Dunham RA, Butts IAE. Analysis of specific mRNA gene expression profiles as markers of egg and embryo quality for hybrid catfish aquaculture. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 110675. PMID 32081738 DOI: 10.1016/J.Cbpa.2020.110675 |
0.365 |
|
| 2020 |
Zhao H, Silliman K, Lewis M, Johnson S, Kratina G, Rider SJ, Stepien CA, Hallerman EM, Beck B, Fuller A, Peatman E. SNP analyses highlight a unique, imperiled southern walleye (Sander vitreus) in the Mobile River Basin Canadian Journal of Fisheries and Aquatic Sciences. 77: 1366-1378. DOI: 10.1139/Cjfas-2019-0351 |
0.647 |
|
| 2020 |
Thongda W, Lewis M, Zhao H, Bowen B, Lutz-Carrillo DJ, Peoples BK, Peatman E. Species-diagnostic SNP markers for the black basses (Micropterus spp.): a new tool for black bass conservation and management Conservation Genetics Resources. 12: 319-328. DOI: 10.1007/S12686-019-01109-8 |
0.659 |
|
| 2019 |
Zhang H, Hall N, Goertzen LR, Chen CY, Peatman E, Patel J, McElroy JS. Transcriptome Analysis Reveals Unique Relationships Among Species and Heritage of . G3 (Bethesda, Md.). PMID 31010823 DOI: 10.1534/G3.119.400214 |
0.418 |
|
| 2019 |
Declercq AM, Cai W, Naranjo E, Thongda W, Eeckhaut V, Bauwens E, Arias C, De La Fuente L, Beck BH, Lange MD, Peatman E, Haesebrouck F, Aerts J, Decostere A. Evidence that the stress hormone cortisol regulates biofilm formation differently among Flavobacterium columnare isolates. Veterinary Research. 50: 24. PMID 30971289 DOI: 10.1186/S13567-019-0641-3 |
0.31 |
|
| 2019 |
Zhang H, Hall N, Goertzen LR, Bi B, Chen CY, Peatman E, Lowe EK, Patel J, McElroy JS. Development of a goosegrass (Eleusine indica) draft genome and application to weed science research. Pest Management Science. PMID 30851005 DOI: 10.1002/Ps.5389 |
0.381 |
|
| 2019 |
Hargrove JS, Weyl OLF, Zhao H, Peatman E, Austin JD. Using species-diagnostic SNPs to detail the distribution and dynamics of hybridized black bass populations in southern Africa Biological Invasions. 21: 1499-1509. DOI: 10.1007/S10530-018-01912-8 |
0.661 |
|
| 2018 |
Zhao H, Fuller A, Thongda W, Mohammed H, Abernathy J, Beck B, Peatman E. SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops). Animal Genetics. PMID 30426519 DOI: 10.1111/Age.12747 |
0.664 |
|
| 2018 |
Elaswad A, Khalil K, Ye Z, Liu Z, Liu S, Peatman E, Odin R, Vo K, Drescher D, Gosh K, Qin G, Bugg W, Backenstose N, Dunham R. Effects of CRISPR/Cas9 dosage on TICAM1 and RBL gene mutation rate, embryonic development, hatchability and fry survival in channel catfish. Scientific Reports. 8: 16499. PMID 30405210 DOI: 10.1038/S41598-018-34738-4 |
0.48 |
|
| 2018 |
Gardner S, Assis VR, Zhao H, Gomes FR, Peatman E, Mendonça MT. Differential gene expression to an LPS challenge in relation to exogenous corticosterone in the invasive cane toad (Rhinella marina). Developmental and Comparative Immunology. PMID 30030104 DOI: 10.1016/J.Dci.2018.07.016 |
0.699 |
|
| 2018 |
Peterson BC, Peatman E, Ourth DD, Waldbieser GC. Phytogenic feed-additive effects on channel catfish rhamnose-binding lectin levels, and susceptibility to Edwardsiella ictaluri. Diseases of Aquatic Organisms. 129: 99-106. PMID 29972370 DOI: 10.3354/Dao03235 |
0.336 |
|
| 2018 |
Mohammed HH, Peatman E. Winter kill in intensively stocked channel catfish (Ictalurus punctatus): Coinfection with Aeromonas veronii, Streptococcus parauberis and Shewanella putrefaciens. Journal of Fish Diseases. PMID 29882217 DOI: 10.1111/Jfd.12827 |
0.377 |
|
| 2018 |
Onming S, Thongda W, Li C, Sawatdichaikul O, McMillan N, Klinbunga S, Peatman E, Poompuang S. Bioinformatics characterization of a cathepsin B transcript from the giant river prawn, Macrobrachium rosenbergii: Homology modeling and expression analysis after Aeromonas hydrophila infection. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. PMID 29649577 DOI: 10.1016/J.Cbpb.2018.04.002 |
0.349 |
|
| 2018 |
Thongda W, Zhao H, Zhang D, Jescovitch LN, Liu M, Guo X, Schrandt M, Powers SP, Peatman E. Development of SNP Panels as a New Tool to Assess the Genetic Diversity, Population Structure, and Parentage Analysis of the Eastern Oyster (Crassostrea virginica). Marine Biotechnology (New York, N.Y.). PMID 29532334 DOI: 10.1007/S10126-018-9803-Y |
0.653 |
|
| 2018 |
Shang M, Su B, Perera DA, Alsaqufi A, Lipke EA, Cek S, Dunn DA, Qin Z, Peatman E, Dunham RA. Testicular germ line cell identification, isolation, and transplantation in two North American catfish species. Fish Physiology and Biochemistry. PMID 29357082 DOI: 10.1007/S10695-018-0467-3 |
0.3 |
|
| 2018 |
Zhao H, Li C, Hargrove JS, Bowen BR, Thongda W, Zhang D, Mohammed H, Beck BH, Austin JD, Peatman E. SNP marker panels for parentage assignment and traceability in the Florida bass ( Micropterus floridanus ) Aquaculture. 485: 30-38. DOI: 10.1016/J.Aquaculture.2017.11.014 |
0.658 |
|
| 2018 |
Peatman E, Mohammed H, Kirby A, Shoemaker CA, Yildirim-Aksoy M, Beck BH. Mechanisms of pathogen virulence and host susceptibility in virulent Aeromonas hydrophila infections of channel catfish (Ictalurus punctatus) Aquaculture. 482: 1-8. DOI: 10.1016/J.Aquaculture.2017.09.019 |
0.364 |
|
| 2017 |
Zhang D, Beck BH, Mohammed H, Zhao H, Thongda W, Ye Z, Zeng Q, Shoemaker C, Fuller SA, Peatman E. l-rhamnose-binding lectins (RBLs) in Nile tilapia, Oreochromis niloticus: Characterization and expression profiling in mucosal tissues. Fish & Shellfish Immunology. PMID 29133252 DOI: 10.1016/J.Fsi.2017.11.015 |
0.723 |
|
| 2017 |
Zhang D, Thongda W, Li C, Zhao H, Beck BH, Mohammed H, Arias C, Peatman E. More than just antibodies: Protective mechanisms of a mucosal vaccine against fish pathogen Flavobacterium columnare. Fish & Shellfish Immunology. PMID 28989091 DOI: 10.1016/J.Fsi.2017.10.001 |
0.654 |
|
| 2017 |
Zhong X, Wang X, Zhou T, Jin Y, Tan S, Jiang C, Geng X, Li N, Shi H, Zeng Q, Yang Y, Yuan Z, Bao L, Liu S, Tian C, ... Peatman E, et al. Genome-Wide Association Study Reveals Multiple Novel QTL Associated with Low Oxygen Tolerance in Hybrid Catfish. Marine Biotechnology (New York, N.Y.). PMID 28601969 DOI: 10.1007/S10126-017-9757-5 |
0.554 |
|
| 2017 |
Abdelrahman H, ElHady M, Alcivar-Warren A, Allen S, Al-Tobasei R, Bao L, Beck B, Blackburn H, Bosworth B, Buchanan J, Chappell J, Daniels W, Dong S, Dunham R, ... ... Peatman E, et al. Erratum to: Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research. Bmc Genomics. 18: 235. PMID 28302067 DOI: 10.1186/S12864-017-3614-9 |
0.476 |
|
| 2017 |
Abdelrahman H, ElHady M, Alcivar-Warren A, Allen S, Al-Tobasei R, Bao L, Beck B, Blackburn H, Bosworth B, Buchanan J, Chappell J, Daniels W, Dong S, Dunham R, ... ... Peatman E, et al. Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research. Bmc Genomics. 18: 191. PMID 28219347 DOI: 10.1186/S12864-017-3557-1 |
0.57 |
|
| 2016 |
Zhang D, Beck BH, Lange M, Zhao H, Thongda W, Ye Z, Li C, Peatman E. Impact of oral and waterborne administration of rhamnolipids on the susceptibility of channel catfish (Ictalurus punctatus) to Flavobacterium columnare infection. Fish & Shellfish Immunology. PMID 27818340 DOI: 10.1016/J.Fsi.2016.10.053 |
0.666 |
|
| 2016 |
Liu Z, Liu S, Yao J, Bao L, Zhang J, Li Y, Jiang C, Sun L, Wang R, Zhang Y, Zhou T, Zeng Q, Fu Q, Gao S, Li N, ... ... Peatman E, et al. The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts. Nature Communications. 7: 11757. PMID 27249958 DOI: 10.1038/Ncomms11757 |
0.596 |
|
| 2016 |
Beck BH, Fuller SA, Li C, Green BW, Zhao H, Rawles SD, Webster CD, Peatman E. Hepatic transcriptomic and metabolic responses of hybrid striped bass (Morone saxatilis×Morone chrysops) to acute and chronic hypoxic insult. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 18: 1-9. PMID 26851735 DOI: 10.1016/J.Cbd.2016.01.005 |
0.666 |
|
| 2016 |
Zhou S, Zhao H, Thongda W, Zhang D, Su B, Yu D, Peatman E, Li C. Galectins in channel catfish, Ictalurus punctatus: Characterization and expression profiling in mucosal tissues. Fish & Shellfish Immunology. PMID 26767746 DOI: 10.1016/J.Fsi.2016.01.005 |
0.727 |
|
| 2016 |
Chen A, Wang R, Liu S, Peatman E, Sun L, Bao L, Jiang C, Li C, Li Y, Zeng Q, Liu Z. Ribosomal protein genes are highly enriched among genes with allele-specific expression in the interspecific F1 hybrid catfish. Molecular Genetics and Genomics : Mgg. PMID 26747053 DOI: 10.1007/S00438-015-1162-Z |
0.586 |
|
| 2016 |
Beck BH, Li C, Farmer BD, Barnett LM, Lange MD, Peatman E. A comparison of high- and low-virulence Flavobacterium columnare strains reveals differences in iron acquisition components and responses to iron restriction. Journal of Fish Diseases. 39: 259-68. PMID 25704170 DOI: 10.1111/Jfd.12343 |
0.373 |
|
| 2015 |
Peatman E, Lange M, Zhao H, Beck BH. Physiology and immunology of mucosal barriers in catfish (Ictalurus spp.). Tissue Barriers. 3: e1068907. PMID 26716071 DOI: 10.1080/21688370.2015.1068907 |
0.655 |
|
| 2015 |
Dong X, Ye Z, Song L, Su B, Zhao H, Peatman E, Li C. Expression profile analysis of two Cathepsin S in channel catfish (Ictalurus punctatus) mucosal tissues following bacterial challenge. Fish & Shellfish Immunology. PMID 26626584 DOI: 10.1016/J.Fsi.2015.11.030 |
0.718 |
|
| 2015 |
Li C, Song L, Tan F, Su B, Zhang D, Zhao H, Peatman E. Identification and mucosal expression analysis of cathepsin B in channel catfish (Ictalurus punctatus) following bacterial challenge. Fish & Shellfish Immunology. 47: 751-757. PMID 26497091 DOI: 10.1016/J.Fsi.2015.10.028 |
0.714 |
|
| 2015 |
Wang R, Song L, Su B, Zhao H, Zhang D, Peatman E, Li C. Mucosal expression signatures of two Cathepsin L in channel catfish (Ictalurus punctatus) following bacterial challenge. Fish & Shellfish Immunology. PMID 26434716 DOI: 10.1016/J.Fsi.2015.09.047 |
0.74 |
|
| 2015 |
Su B, Shang M, Grewe PM, Patil JG, Peatman E, Perera DA, Cheng Q, Li C, Weng CC, Li P, Liu Z, Dunham RA. Suppression and restoration of primordial germ cell marker gene expression in channel catfish, Ictalurus punctatus, using knockdown constructs regulated by copper transport protein gene promoters: Potential for reversible transgenic sterilization. Theriogenology. PMID 26341409 DOI: 10.1016/J.Theriogenology.2015.07.037 |
0.562 |
|
| 2015 |
Shang M, Su B, Lipke EA, Perera DA, Li C, Qin Z, Li Y, Dunn DA, Cek S, Peatman E, Dunham RA. Spermatogonial stem cells specific marker identification in channel catfish, Ictalurus punctatus and blue catfish, I. furcatus. Fish Physiology and Biochemistry. PMID 26251285 DOI: 10.1007/S10695-015-0106-1 |
0.421 |
|
| 2015 |
Ren Y, Zhao H, Su B, Peatman E, Li C. Expression profiling analysis of immune-related genes in channel catfish (Ictalurus punctatus) skin mucus following Flavobacterium columnare challenge. Fish & Shellfish Immunology. 46: 537-542. PMID 26220643 DOI: 10.1016/J.Fsi.2015.07.021 |
0.738 |
|
| 2015 |
Zhao H, Li C, Beck BH, Zhang R, Thongda W, Davis DA, Peatman E. Impact of feed additives on surface mucosal health and columnaris susceptibility in channel catfish fingerlings, Ictalurus punctatus. Fish & Shellfish Immunology. PMID 26164837 DOI: 10.1016/J.Fsi.2015.07.005 |
0.655 |
|
| 2015 |
Peterson BC, Peatman E, Ourth DD, Waldbieser GC. Effects of a phytogenic feed additive on growth performance, susceptibility of channel catfish to Edwardsiella ictaluri and levels of mannose binding lectin. Fish & Shellfish Immunology. 44: 21-5. PMID 25659231 DOI: 10.1016/J.Fsi.2015.01.027 |
0.321 |
|
| 2015 |
Su B, Shang M, Li C, Perera DA, Pinkert CA, Irwin MH, Peatman E, Grewe P, Patil JG, Dunham RA. Effects of transgenic sterilization constructs and their repressor compounds on hatch, developmental rate and early survival of electroporated channel catfish embryos and fry. Transgenic Research. 24: 333-52. PMID 25367204 DOI: 10.1007/S11248-014-9846-4 |
0.338 |
|
| 2015 |
Li C, Gowan S, Anil A, Beck BH, Thongda W, Kucuktas H, Kaltenboeck L, Peatman E. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus) Molecular Ecology Resources. 15: 395-404. PMID 25047482 DOI: 10.1111/1755-0998.12308 |
0.382 |
|
| 2015 |
Beck BH, Barnett LM, Farmer BD, Peatman E, Carter D. Kaolinitic clay protects against Flavobacterium columnare infection in channel catfish Ictalurus punctatus (Rafinesque). Journal of Fish Diseases. 38: 241-8. PMID 24499204 DOI: 10.1111/Jfd.12229 |
0.333 |
|
| 2015 |
Ren Y, Zhao H, Su B, Peatman E, Li C. Expression profiling analysis of immune-related genes in channel catfish (Ictalurus punctatus) skin mucus following Flavobacterium columnare challenge Fish and Shellfish Immunology. 46: 537-542. DOI: 10.1016/j.fsi.2015.07.021 |
0.323 |
|
| 2014 |
Li C, Beck BH, Fuller SA, Peatman E. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Animal Genetics. 45: 885-7. PMID 25160849 DOI: 10.1111/Age.12211 |
0.477 |
|
| 2014 |
Li C, Waldbieser G, Bosworth B, Beck BH, Thongda W, Peatman E. SNP discovery in wild and domesticated populations of blue catfish, Ictalurus furcatus, using genotyping-by-sequencing and subsequent SNP validation Molecular Ecology Resources. 14: 1261-1270. PMID 24797164 DOI: 10.1111/1755-0998.12272 |
0.319 |
|
| 2014 |
Wang X, Li C, Thongda W, Luo Y, Beck B, Peatman E. Characterization and mucosal responses of interleukin 17 family ligand and receptor genes in channel catfish Ictalurus punctatus Fish & Shellfish Immunology. 38: 47-55. PMID 24602926 DOI: 10.1016/J.Fsi.2014.02.020 |
0.374 |
|
| 2014 |
Luo Y, Li C, Landis AG, Wang G, Stoeckel J, Peatman E. Transcriptomic profiling of differential responses to drought in two freshwater mussel species, the giant floater Pyganodon grandis and the pondhorn Uniomerus tetralasmus. Plos One. 9: e89481. PMID 24586812 DOI: 10.1371/Journal.Pone.0089481 |
0.466 |
|
| 2014 |
Thongda W, Li C, Luo Y, Beck BH, Peatman E. L-Rhamnose-binding lectins (RBLs) in channel catfish, Ictalurus punctatus: Characterization and expression profiling in mucosal tissues Developmental and Comparative Immunology. 44: 320-331. PMID 24480296 DOI: 10.1016/J.Dci.2014.01.018 |
0.455 |
|
| 2014 |
Li C, Beck BH, Peatman E. Nutritional impacts on gene expression in the surface mucosa of blue catfish (Ictalurus furcatus). Developmental and Comparative Immunology. 44: 226-234. PMID 24378224 DOI: 10.1016/J.Dci.2013.12.014 |
0.472 |
|
| 2014 |
Wong LL, Peatman E, Kelly L, Kucuktas H, Na-Nakorn U, Liu Z. Catfish Species Identification Using Lab-On-Chip PCR-RFLP Journal of Aquatic Food Product Technology. 23: 2-13. DOI: 10.1080/10498850.2012.690022 |
0.498 |
|
| 2014 |
Su B, Peatman E, Shang M, Thresher R, Grewe P, Patil J, Pinkert CA, Irwin MH, Li C, Perera DA, Duncan PL, Fobes M, Dunham RA. Expression and knockdown of primordial germ cell genes, vasa, nanos and dead end in common carp (Cyprinus carpio) embryos for transgenic sterilization and reduced sexual maturity Aquaculture. 420. DOI: 10.1016/J.Aquaculture.2013.07.008 |
0.377 |
|
| 2013 |
Liu L, Li C, Su B, Beck BH, Peatman E. Short-term feed deprivation alters immune status of surface mucosa in channel catfish (Ictalurus punctatus). Plos One. 8: e74581. PMID 24023952 DOI: 10.1371/Journal.Pone.0074581 |
0.436 |
|
| 2013 |
Peatman E, Li C, Peterson BC, Straus DL, Farmer BD, Beck BH. Basal polarization of the mucosal compartment in Flavobacterium columnare susceptible and resistant channel catfish (Ictalurus punctatus). Molecular Immunology. 56: 317-27. PMID 23895942 DOI: 10.1016/J.Molimm.2013.04.014 |
0.463 |
|
| 2013 |
Liu S, Wang X, Sun F, Zhang J, Feng J, Liu H, Rajendran KV, Sun L, Zhang Y, Jiang Y, Peatman E, Kaltenboeck L, Kucuktas H, Liu Z. RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish. Physiological Genomics. 45: 462-76. PMID 23632418 DOI: 10.1152/Physiolgenomics.00026.2013 |
0.534 |
|
| 2013 |
Sahu DK, Panda SP, Panda S, Das P, Meher PK, Hazra RK, Peatman E, Liu ZJ, Eknath AE, Nandi S. Identification of reproduction-related genes and SSR-markers through expressed sequence tags analysis of a monsoon breeding carp rohu, Labeo rohita (Hamilton). Gene. 524: 1-14. PMID 23583682 DOI: 10.1016/J.Gene.2013.03.111 |
0.606 |
|
| 2013 |
Li C, Beck B, Su B, Terhune J, Peatman E. Early mucosal responses in blue catfish (Ictalurus furcatus) skin to Aeromonas hydrophila infection Fish & Shellfish Immunology. 34: 920-928. PMID 23337110 DOI: 10.1016/J.Fsi.2013.01.002 |
0.415 |
|
| 2013 |
Li C, Wang R, Su B, Luo Y, Terhune J, Beck B, Peatman E. Evasion of mucosal defenses during Aeromonas hydrophila infection of channel catfish (Ictalurus punctatus) skin. Developmental and Comparative Immunology. 39: 447-455. PMID 23219904 DOI: 10.1016/J.Dci.2012.11.009 |
0.438 |
|
| 2012 |
Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Bmc Genomics. 13: 595. PMID 23127152 DOI: 10.1186/1471-2164-13-595 |
0.575 |
|
| 2012 |
Ninwichian P, Peatman E, Liu H, Kucuktas H, Somridhivej B, Liu S, Li P, Jiang Y, Sha Z, Kaltenboeck L, Abernathy JW, Wang W, Chen F, Lee Y, Wong L, et al. Second-generation genetic linkage map of catfish and its integration with the BAC-based physical map. G3 (Bethesda, Md.). 2: 1233-41. PMID 23050234 DOI: 10.1534/G3.112.003962 |
0.756 |
|
| 2012 |
Beck BH, Farmer BD, Straus DL, Li C, Peatman E. Putative roles for a rhamnose binding lectin in Flavobacterium columnare pathogenesis in channel catfish Ictalurus punctatus. Fish & Shellfish Immunology. 33: 1008-15. PMID 22960031 DOI: 10.1016/J.Fsi.2012.08.018 |
0.434 |
|
| 2012 |
Arias CR, Cai W, Peatman E, Bullard SA. Catfish hybrid Ictalurus punctatus × I. furcatus exhibits higher resistance to columnaris disease than the parental species. Diseases of Aquatic Organisms. 100: 77-81. PMID 22885516 DOI: 10.3354/Dao02492 |
0.301 |
|
| 2012 |
Lu J, Peatman E, Tang H, Lewis J, Liu Z. Profiling of gene duplication patterns of sequenced teleost genomes: evidence for rapid lineage-specific genome expansion mediated by recent tandem duplications. Bmc Genomics. 13: 246. PMID 22702965 DOI: 10.1186/1471-2164-13-246 |
0.581 |
|
| 2012 |
Sun F, Peatman E, Li C, Liu S, Jiang Y, Zhou Z, Liu Z. Transcriptomic signatures of attachment, NF-κB suppression and IFN stimulation in the catfish gill following columnaris bacterial infection. Developmental and Comparative Immunology. 38: 169-80. PMID 22669032 DOI: 10.1016/J.Dci.2012.05.006 |
0.61 |
|
| 2012 |
Beck BH, Fuller SA, Peatman E, McEntire ME, Darwish A, Freeman DW. Chronic exogenous kisspeptin administration accelerates gonadal development in basses of the genus Morone. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 162: 265-73. PMID 22497780 DOI: 10.1016/J.Cbpa.2012.03.019 |
0.347 |
|
| 2012 |
Ninwichian P, Peatman E, Perera D, Liu S, Kucuktas H, Dunham R, Liu Z. Identification of a sex-linked marker for channel catfish. Animal Genetics. 43: 476-7. PMID 22497362 DOI: 10.1111/J.1365-2052.2011.02276.X |
0.493 |
|
| 2012 |
Rajendran KV, Zhang J, Liu S, Peatman E, Kucuktas H, Wang X, Liu H, Wood T, Terhune J, Liu Z. Pathogen recognition receptors in channel catfish: II. Identification, phylogeny and expression of retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs). Developmental and Comparative Immunology. 37: 381-9. PMID 22387588 DOI: 10.1016/J.Dci.2012.02.004 |
0.588 |
|
| 2012 |
Li C, Zhang Y, Wang R, Lu J, Nandi S, Mohanty S, Terhune J, Liu Z, Peatman E. RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus. Fish & Shellfish Immunology. 32: 816-27. PMID 22366064 DOI: 10.1016/J.Fsi.2012.02.004 |
0.612 |
|
| 2012 |
Zhang H, Peatman E, Liu H, Feng T, Chen L, Liu Z. Molecular characterization of three L-type lectin genes from channel catfish, Ictalurus punctatus and their responses to Edwardsiella ictaluri challenge. Fish & Shellfish Immunology. 32: 598-608. PMID 22245838 DOI: 10.1016/J.Fsi.2011.12.009 |
0.603 |
|
| 2012 |
Rajendran KV, Zhang J, Liu S, Kucuktas H, Wang X, Liu H, Sha Z, Terhune J, Peatman E, Liu Z. Pathogen recognition receptors in channel catfish: I. Identification, phylogeny and expression of NOD-like receptors. Developmental and Comparative Immunology. 37: 77-86. PMID 22200599 DOI: 10.1016/J.Dci.2011.12.005 |
0.624 |
|
| 2012 |
Zhou Z, Liu H, Liu S, Sun F, Peatman E, Kucuktas H, Kaltenboeck L, Feng T, Zhang H, Niu D, Lu J, Waldbieser G, Liu Z. Alternative complement pathway of channel catfish (Ictalurus punctatus): molecular characterization, mapping and expression analysis of factors Bf/C2 and Df. Fish & Shellfish Immunology. 32: 186-95. PMID 22138130 DOI: 10.1016/J.Fsi.2011.11.012 |
0.577 |
|
| 2012 |
Zhang H, Peatman E, Liu H, Niu D, Feng T, Kucuktas H, Waldbieser G, Chen L, Liu Z. Characterization of a mannose-binding lectin from channel catfish (Ictalurus punctatus). Research in Veterinary Science. 92: 408-13. PMID 21524427 DOI: 10.1016/J.Rvsc.2011.03.024 |
0.543 |
|
| 2012 |
Wang R, Li C, Stoeckel J, Moyer G, Liu Z, Peatman E. Rapid development of molecular resources for a freshwater mussel, Villosa lienosa (Bivalvia:Unionidae), using an RNA-seq-based approach Freshwater Science. 31: 695-708. DOI: 10.1899/11-149.1 |
0.562 |
|
| 2011 |
Jiang Y, Lu J, Peatman E, Kucuktas H, Liu S, Wang S, Sun F, Liu Z. A pilot study for channel catfish whole genome sequencing and de novo assembly. Bmc Genomics. 12: 629. PMID 22192763 DOI: 10.1186/1471-2164-12-629 |
0.629 |
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| 2011 |
Abernathy J, Xu DH, Peatman E, Kucuktas H, Klesius P, Liu Z. Gene expression profiling of a fish parasite Ichthyophthirius multifiliis: Insights into development and senescence-associated avirulence. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 6: 382-92. PMID 21890440 DOI: 10.1016/J.Cbd.2011.08.003 |
0.779 |
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| 2011 |
Feng T, Zhang H, Liu H, Zhou Z, Niu D, Wong L, Kucuktas H, Liu X, Peatman E, Liu Z. Molecular characterization and expression analysis of the channel catfish cathepsin D genes. Fish & Shellfish Immunology. 31: 164-9. PMID 21558007 DOI: 10.1016/J.Fsi.2011.04.006 |
0.58 |
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| 2011 |
Wong LL, Peatman E, Lu J, Kucuktas H, He S, Zhou C, Na-nakorn U, Liu Z. DNA barcoding of catfish: species authentication and phylogenetic assessment. Plos One. 6: e17812. PMID 21423623 DOI: 10.1371/Journal.Pone.0017812 |
0.525 |
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| 2011 |
Liu S, Zhou Z, Lu J, Sun F, Wang S, Liu H, Jiang Y, Kucuktas H, Kaltenboeck L, Peatman E, Liu Z. Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array. Bmc Genomics. 12: 53. PMID 21255432 DOI: 10.1186/1471-2164-12-53 |
0.64 |
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| 2011 |
Niu D, Peatman E, Liu H, Lu J, Kucuktas H, Liu S, Sun F, Zhang H, Feng T, Zhou Z, Terhune J, Waldbieser G, Li J, Liu Z. Microfibrillar-associated protein 4 (MFAP4) genes in catfish play a novel role in innate immune responses. Developmental and Comparative Immunology. 35: 568-79. PMID 21232551 DOI: 10.1016/J.Dci.2011.01.002 |
0.643 |
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| 2011 |
Liu H, Peatman E, Wang W, Abernathy J, Liu S, Kucuktas H, Terhune J, Xu DH, Klesius P, Liu Z. Molecular responses of ceruloplasmin to Edwardsiella ictaluri infection and iron overload in channel catfish (Ictalurus punctatus). Fish & Shellfish Immunology. 30: 992-7. PMID 21220026 DOI: 10.1016/J.Fsi.2010.12.033 |
0.789 |
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| 2011 |
Bao B, Ke Z, Xing J, Peatman E, Liu Z, Xie C, Xu B, Gai J, Gong X, Yang G, Jiang Y, Tang W, Ren D. Proliferating cells in suborbital tissue drive eye migration in flatfish. Developmental Biology. 351: 200-7. PMID 21195706 DOI: 10.1016/J.Ydbio.2010.12.032 |
0.424 |
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| 2011 |
Liu H, Peatman E, Wang W, Abernathy J, Liu S, Kucuktas H, Lu J, Xu DH, Klesius P, Waldbieser G, Liu Z. Molecular responses of calreticulin genes to iron overload and bacterial challenge in channel catfish (Ictalurus punctatus). Developmental and Comparative Immunology. 35: 267-72. PMID 21093478 DOI: 10.1016/J.Dci.2010.11.009 |
0.792 |
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| 2011 |
Lu J, Peatman E, Yang Q, Wang S, Hu Z, Reecy J, Kucuktas H, Liu Z. The catfish genome database cBARBEL: an informatic platform for genome biology of ictalurid catfish. Nucleic Acids Research. 39: D815-21. PMID 20935046 DOI: 10.1093/Nar/Gkq765 |
0.603 |
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| 2011 |
Xu D, Klesius PH, Peatman E, Liu Z. Susceptibility of channel catfish, blue catfish and channel×blue catfish hybrid to Ichthyophthirius multifiliis Aquaculture. 311: 25-30. DOI: 10.1016/J.Aquaculture.2010.10.012 |
0.527 |
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| 2010 |
Wang S, Peatman E, Liu H, Bushek D, Ford SE, Kucuktas H, Quilang J, Li P, Wallace R, Wang Y, Guo X, Liu Z. Microarray analysis of gene expression in eastern oyster (Crassostrea virginica) reveals a novel combination of antimicrobial and oxidative stress host responses after dermo (Perkinsus marinus) challenge. Fish & Shellfish Immunology. 29: 921-9. PMID 20708691 DOI: 10.1016/J.Fsi.2010.07.035 |
0.682 |
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| 2010 |
Chen F, Lee Y, Jiang Y, Wang S, Peatman E, Abernathy J, Liu H, Liu S, Kucuktas H, Ke C, Liu Z. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Plos One. 5: e11546. PMID 20634964 DOI: 10.1371/Journal.Pone.0011546 |
0.802 |
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| 2010 |
Lu J, Peatman E, Wang W, Yang Q, Abernathy J, Wang S, Kucuktas H, Liu Z. Alternative splicing in teleost fish genomes: same-species and cross-species analysis and comparisons. Molecular Genetics and Genomics : Mgg. 283: 531-9. PMID 20383527 DOI: 10.1007/S00438-010-0538-3 |
0.799 |
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| 2010 |
Liu H, Takano T, Peatman E, Abernathy J, Wang S, Sha Z, Kucuktas H, Xu DH, Klesius P, Liu Z. Molecular characterization and gene expression of the channel catfish ferritin H subunit after bacterial infection and iron treatment. Journal of Experimental Zoology. Part a, Ecological Genetics and Physiology. 313: 359-68. PMID 20336795 DOI: 10.1002/Jez.606 |
0.8 |
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| 2010 |
Wang S, Peatman E, Abernathy J, Waldbieser G, Lindquist E, Richardson P, Lucas S, Wang M, Li P, Thimmapuram J, Liu L, Vullaganti D, Kucuktas H, Murdock C, Small BC, et al. Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies. Genome Biology. 11: R8. PMID 20096101 DOI: 10.1186/Gb-2010-11-1-R8 |
0.81 |
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| 2010 |
Jiang Y, Abernathy JW, Peatman E, Liu H, Wang S, Xu DH, Kucuktas H, Klesius P, Liu Z. Identification and characterization of matrix metalloproteinase-13 sequence structure and expression during embryogenesis and infection in channel catfish (Ictalurus punctatus). Developmental and Comparative Immunology. 34: 590-7. PMID 20060415 DOI: 10.1016/J.Dci.2010.01.001 |
0.773 |
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| 2010 |
Liu H, Takano T, Abernathy J, Wang S, Sha Z, Jiang Y, Terhune J, Kucuktas H, Peatman E, Liu Z. Structure and expression of transferrin gene of channel catfish, Ictalurus punctatus. Fish & Shellfish Immunology. 28: 159-66. PMID 19837170 DOI: 10.1016/J.Fsi.2009.10.014 |
0.817 |
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| 2009 |
Sha Z, Abernathy JW, Wang S, Li P, Kucuktas H, Liu H, Peatman E, Liu Z. NOD-like subfamily of the nucleotide-binding domain and leucine-rich repeat containing family receptors and their expression in channel catfish. Developmental and Comparative Immunology. 33: 991-9. PMID 19414032 DOI: 10.1016/J.Dci.2009.04.004 |
0.825 |
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| 2008 |
Wang S, Sha Z, Sonstegard TS, Liu H, Xu P, Somridhivej B, Peatman E, Kucuktas H, Liu Z. Quality assessment parameters for EST-derived SNPs from catfish. Bmc Genomics. 9: 450. PMID 18826589 DOI: 10.1186/1471-2164-9-450 |
0.646 |
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| 2008 |
Takano T, Sha Z, Peatman E, Terhune J, Liu H, Kucuktas H, Li P, Edholm ES, Wilson M, Liu Z. The two channel catfish intelectin genes exhibit highly differential patterns of tissue expression and regulation after infection with Edwardsiella ictaluri. Developmental and Comparative Immunology. 32: 693-705. PMID 18078992 DOI: 10.1016/J.Dci.2007.10.008 |
0.669 |
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| 2008 |
Peatman E, Terhune J, Baoprasertkul P, Xu P, Nandi S, Wang S, Somridhivej B, Kucuktas H, Li P, Dunham R, Liu Z. Microarray analysis of gene expression in the blue catfish liver reveals early activation of the MHC class I pathway after infection with Edwardsiella ictaluri. Molecular Immunology. 45: 553-66. PMID 17599411 DOI: 10.1016/J.Molimm.2007.05.012 |
0.828 |
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| 2007 |
Baoprasertkul P, Xu P, Peatman E, Kucuktas H, Liu Z. Divergent Toll-like receptors in catfish (Ictalurus punctatus): TLR5S, TLR20, TLR21. Fish & Shellfish Immunology. 23: 1218-30. PMID 17981052 DOI: 10.1016/J.Fsi.2007.06.002 |
0.804 |
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| 2007 |
Li P, Peatman E, Wang S, Feng J, He C, Baoprasertkul P, Xu P, Kucuktas H, Nandi S, Somridhivej B, Serapion J, Simmons M, Turan C, Liu L, Muir W, et al. Towards the ictalurid catfish transcriptome: generation and analysis of 31,215 catfish ESTs. Bmc Genomics. 8: 177. PMID 17577415 DOI: 10.1186/1471-2164-8-177 |
0.819 |
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| 2007 |
Quilang J, Wang S, Li P, Abernathy J, Peatman E, Wang Y, Wang L, Shi Y, Wallace R, Guo X, Liu Z. Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers. Bmc Genomics. 8: 157. PMID 17559679 DOI: 10.1186/1471-2164-8-157 |
0.787 |
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| 2007 |
Peatman E, Liu Z. Evolution of CC chemokines in teleost fish: a case study in gene duplication and implications for immune diversity. Immunogenetics. 59: 613-23. PMID 17541578 DOI: 10.1007/S00251-007-0228-4 |
0.567 |
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| 2007 |
Peatman E, Baoprasertkul P, Terhune J, Xu P, Nandi S, Kucuktas H, Li P, Wang S, Somridhivej B, Dunham R, Liu Z. Expression analysis of the acute phase response in channel catfish (Ictalurus punctatus) after infection with a Gram-negative bacterium. Developmental and Comparative Immunology. 31: 1183-96. PMID 17449095 DOI: 10.1016/J.Dci.2007.03.003 |
0.824 |
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| 2007 |
Baoprasertkul P, Peatman E, Abernathy J, Liu Z. Structural characterisation and expression analysis of toll-like receptor 2 gene from catfish. Fish & Shellfish Immunology. 22: 418-26. PMID 17116407 DOI: 10.1016/J.Fsi.2006.04.005 |
0.811 |
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| 2007 |
Nandi S, Peatman E, Xu P, Wang S, Li P, Liu Z. Repeat structure of the catfish genome: a genomic and transcriptomic assessment of Tc1-like transposon elements in channel catfish (Ictalurus punctatus). Genetica. 131: 81-90. PMID 17091335 DOI: 10.1007/S10709-006-9115-4 |
0.665 |
|
| 2007 |
Yang G, Bao B, Peatman E, Li H, Huang L, Ren D. Analysis of the composition of the bacterial community in puffer fish Takifugu obscurus Aquaculture. 262: 183-191. DOI: 10.1016/J.Aquaculture.2006.11.031 |
0.324 |
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| 2006 |
Baoprasertkul P, Peatman E, Somridhivej B, Liu Z. Toll-like receptor 3 and TICAM genes in catfish: species-specific expression profiles following infection with Edwardsiella ictaluri. Immunogenetics. 58: 817-30. PMID 16969679 DOI: 10.1007/S00251-006-0144-Z |
0.822 |
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| 2006 |
Xu P, Wang S, Liu L, Peatman E, Somridhivej B, Thimmapuram J, Gong G, Liu Z. Channel catfish BAC-end sequences for marker development and assessment of syntenic conservation with other fish species. Animal Genetics. 37: 321-326. PMID 16879340 DOI: 10.1111/J.1365-2052.2006.01453.X |
0.679 |
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| 2006 |
Peatman E, Liu Z. CC chemokines in zebrafish: evidence for extensive intrachromosomal gene duplications. Genomics. 88: 381-5. PMID 16697551 DOI: 10.1016/J.Ygeno.2006.03.014 |
0.633 |
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| 2006 |
Bao B, Peatman E, Peng X, Baoprasertkul P, Wang G, Liu Z. Characterization of 23 CC chemokine genes and analysis of their expression in channel catfish (Ictalurus punctatus). Developmental and Comparative Immunology. 30: 783-96. PMID 16510183 DOI: 10.1016/J.Dci.2005.10.007 |
0.839 |
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| 2006 |
Peatman E, Bao B, Peng X, Baoprasertkul P, Brady Y, Liu Z. Catfish CC chemokines: genomic clustering, duplications, and expression after bacterial infection with Edwardsiella ictaluri. Molecular Genetics and Genomics : Mgg. 275: 297-309. PMID 16341548 DOI: 10.1007/S00438-005-0081-9 |
0.819 |
|
| 2006 |
Bao B, Peatman E, Xu P, Li P, Zeng H, He C, Liu Z. The catfish liver-expressed antimicrobial peptide 2 (LEAP-2) gene is expressed in a wide range of tissues and developmentally regulated. Molecular Immunology. 43: 367-77. PMID 16310050 DOI: 10.1016/J.Molimm.2005.02.014 |
0.583 |
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| 2006 |
Wang Y, Wang Q, Baoprasertkul P, Peatman E, Liu Z. Genomic organization, gene duplication, and expression analysis of interleukin-1beta in channel catfish (Ictalurus punctatus). Molecular Immunology. 43: 1653-64. PMID 16280165 DOI: 10.1016/J.Molimm.2005.09.024 |
0.783 |
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| 2006 |
Wang Q, Bao B, Wang Y, Peatman E, Liu Z. Characterization of a NK-lysin antimicrobial peptide gene from channel catfish. Fish & Shellfish Immunology. 20: 419-26. PMID 16005642 DOI: 10.1016/J.Fsi.2005.05.005 |
0.481 |
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| 2005 |
Peatman E, Bao B, Baoprasertkul P, Liu Z. In silico identification and expression analysis of 12 novel CC chemokines in catfish. Immunogenetics. 57: 409-19. PMID 16001127 DOI: 10.1007/S00251-005-0006-0 |
0.809 |
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| 2005 |
Baoprasertkul P, He C, Peatman E, Zhang S, Li P, Liu Z. Constitutive expression of three novel catfish CXC chemokines: homeostatic chemokines in teleost fish. Molecular Immunology. 42: 1355-66. PMID 15950731 DOI: 10.1016/J.Molimm.2004.12.012 |
0.83 |
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| 2005 |
Bao B, Peatman E, Li P, He C, Liu Z. Catfish hepcidin gene is expressed in a wide range of tissues and exhibits tissue-specific upregulation after bacterial infection. Developmental and Comparative Immunology. 29: 939-50. PMID 15935472 DOI: 10.1016/J.Dci.2005.03.006 |
0.636 |
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| 2005 |
Xu P, Bao B, He Q, Peatman E, He C, Liu Z. Characterization and expression analysis of bactericidal permeability-increasing protein (BPI) antimicrobial peptide gene from channel catfish Ictalurus punctatus. Developmental and Comparative Immunology. 29: 865-78. PMID 15896843 DOI: 10.1016/J.Dci.2005.03.004 |
0.645 |
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| 2004 |
He C, Peatman E, Baoprasertkul P, Kucuktas H, Liu Z. Multiple CC chemokines in channel catfish and blue catfish as revealed by analysis of expressed sequence tags. Immunogenetics. 56: 379-87. PMID 15309344 DOI: 10.1007/S00251-004-0697-7 |
0.813 |
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| 2004 |
Baoprasertkul P, Peatman E, Chen L, He C, Kucuktas H, Li P, Simmons M, Liu Z. Sequence analysis and expression of a CXC chemokine in resistant and susceptible catfish after infection of Edwardsiella ictaluri. Developmental and Comparative Immunology. 28: 769-80. PMID 15043945 DOI: 10.1016/J.Dci.2003.12.002 |
0.809 |
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