Venkatraman Ramakrishnan - Publications

Affiliations: 
1995-1999 University of Utah, Salt Lake City, UT 
 1999- MRC Laboratory of Molecular Biology, Cambridge, England, United Kingdom 
Area:
Biochemistry, structural chemistry
Website:
http://nobelprize.org/nobel_prizes/chemistry/laureates/2009/ramakrishnan.html

131 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Brown A, Rathore S, Kimanius D, Aibara S, Bai XC, Rorbach J, Amunts A, Ramakrishnan V. Structures of the human mitochondrial ribosome in native states of assembly. Nature Structural & Molecular Biology. PMID 28892042 DOI: 10.1038/nsmb.3464  0.36
2016 Shao S, Murray J, Brown A, Taunton J, Ramakrishnan V, Hegde RS. Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell. 167: 1229-1240.e15. PMID 27863242 DOI: 10.1016/j.cell.2016.10.046  0.36
2016 Hussain T, Llácer JL, Wimberly BT, Kieft JS, Ramakrishnan V. Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation. Cell. 167: 133-144.e13. PMID 27662086 DOI: 10.1016/j.cell.2016.08.074  0.64
2016 Brown A, Fernández IS, Gordiyenko Y, Ramakrishnan V. Ribosome-dependent activation of stringent control Nature. DOI: 10.1038/nature17675  0.96
2015 Brown A, Shao S, Murray J, Hegde RS, Ramakrishnan V. Structural basis for stop codon recognition in eukaryotes. Nature. 524: 493-6. PMID 26245381 DOI: 10.1038/nature14896  0.36
2015 Amunts A, Brown A, Toots J, Scheres SH, Ramakrishnan V. Ribosome. The structure of the human mitochondrial ribosome. Science (New York, N.Y.). 348: 95-8. PMID 25838379 DOI: 10.1126/science.aaa1193  1
2015 Ramakrishnan V. The Diamond Light Source and the challenges ahead for structural biology: some informal remarks. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 373. PMID 25624524 DOI: 10.1098/rsta.2013.0156  1
2015 Amunts A, Fiedorczuk K, Truong TT, Chandler J, Peter Greenberg E, Ramakrishnan V. Bactobolin A binds to a site on the 70S ribosome distinct from previously seen antibiotics. Journal of Molecular Biology. 427: 753-5. PMID 25562208 DOI: 10.1016/j.jmb.2014.12.018  1
2015 Brown A, Shao S, Murray J, Hegde RS, Ramakrishnan V. Structural basis for stop codon recognition in eukaryotes Nature. 524: 493-496. DOI: 10.1038/nature14896  1
2015 Llácer JL, Hussain T, Marler L, Aitken CE, Thakur A, Lorsch JR, Hinnebusch AG, Ramakrishnan V. Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex Molecular Cell. DOI: 10.1016/j.molcel.2015.06.033  1
2014 Hussain T, Llácer JL, Fernández IS, Munoz A, Martin-Marcos P, Savva CG, Lorsch JR, Hinnebusch AG, Ramakrishnan V. Structural changes enable start codon recognition by the eukaryotic translation initiation complex. Cell. 159: 597-607. PMID 25417110 DOI: 10.1016/j.cell.2014.10.001  1
2014 Ramakrishnan V. The ribosome emerges from a black box. Cell. 159: 979-84. PMID 25416939 DOI: 10.1016/j.cell.2014.10.052  1
2014 Brown A, Amunts A, Bai XC, Sugimoto Y, Edwards PC, Murshudov G, Scheres SH, Ramakrishnan V. Structure of the large ribosomal subunit from human mitochondria. Science (New York, N.Y.). 346: 718-22. PMID 25278503 DOI: 10.1126/science.1258026  1
2014 Fernández IS, Bai XC, Murshudov G, Scheres SH, Ramakrishnan V. Initiation of translation by cricket paralysis virus IRES requires its translocation in the ribosome. Cell. 157: 823-31. PMID 24792965 DOI: 10.1016/j.cell.2014.04.015  0.96
2014 Amunts A, Brown A, Bai XC, Llácer JL, Hussain T, Emsley P, Long F, Murshudov G, Scheres SH, Ramakrishnan V. Structure of the yeast mitochondrial large ribosomal subunit. Science (New York, N.Y.). 343: 1485-9. PMID 24675956 DOI: 10.1017/S1431927614007995  1
2014 Ban N, Beckmann R, Cate JH, Dinman JD, Dragon F, Ellis SR, Lafontaine DL, Lindahl L, Liljas A, Lipton JM, McAlear MA, Moore PB, Noller HF, Ortega J, Panse VG, ... Ramakrishnan V, et al. A new system for naming ribosomal proteins. Current Opinion in Structural Biology. 24: 165-9. PMID 24524803 DOI: 10.1016/j.sbi.2014.01.002  0.92
2014 Perez-Fernandez D, Shcherbakov D, Matt T, Leong NC, Kudyba I, Duscha S, Boukari H, Patak R, Dubbaka SR, Lang K, Meyer M, Akbergenov R, Freihofer P, Vaddi S, Thommes P, ... Ramakrishnan V, et al. 4'-O-substitutions determine selectivity of aminoglycoside antibiotics. Nature Communications. 5: 3112. PMID 24473108 DOI: 10.1038/ncomms4112  0.96
2013 Fernández IS, Bai XC, Hussain T, Kelley AC, Lorsch JR, Ramakrishnan V, Scheres SH. Molecular architecture of a eukaryotic translational initiation complex. Science (New York, N.Y.). 342: 1240585. PMID 24200810 DOI: 10.1126/science.1240585  0.96
2013 Agirrezabala X, Fernández IS, Kelley AC, Cartón DG, Ramakrishnan V, Valle M. The ribosome triggers the stringent response by RelA via a highly distorted tRNA. Embo Reports. 14: 811-6. PMID 23877429 DOI: 10.1038/embor.2013.106  0.96
2013 Tourigny DS, Fernández IS, Kelley AC, Ramakrishnan V. Elongation factor G bound to the ribosome in an intermediate state of translocation. Science (New York, N.Y.). 340: 1235490. PMID 23812720 DOI: 10.1126/science.1235490  0.84
2013 Fernández IS, Ng CL, Kelley AC, Wu G, Yu YT, Ramakrishnan V. Unusual base pairing during the decoding of a stop codon by the ribosome. Nature. 500: 107-10. PMID 23812587 DOI: 10.1038/nature12302  0.96
2013 Voorhees RM, Ramakrishnan V. Structural basis of the translational elongation cycle. Annual Review of Biochemistry. 82: 203-36. PMID 23746255 DOI: 10.1146/annurev-biochem-113009-092313  0.96
2013 Tourigny DS, Fernández IS, Kelley AC, Vakiti RR, Chattopadhyay AK, Dorich S, Hanessian S, Ramakrishnan V. Crystal structure of a bioactive pactamycin analog bound to the 30S ribosomal subunit. Journal of Molecular Biology. 425: 3907-10. PMID 23702293 DOI: 10.1016/j.jmb.2013.05.004  0.96
2013 Voorhees RM, Mandal D, Neubauer C, Köhrer C, RajBhandary UL, Ramakrishnan V. The structural basis for specific decoding of AUA by isoleucine tRNA on the ribosome. Nature Structural & Molecular Biology. 20: 641-3. PMID 23542153 DOI: 10.1038/nsmb.2545  0.96
2012 Selmer M, Gao YG, Weixlbaumer A, Ramakrishnan V. Ribosome engineering to promote new crystal forms. Acta Crystallographica. Section D, Biological Crystallography. 68: 578-83. PMID 22525755 DOI: 10.1107/S0907444912006348  1
2011 Schmeing TM, Voorhees RM, Kelley AC, Ramakrishnan V. How mutations in tRNA distant from the anticodon affect the fidelity of decoding. Nature Structural & Molecular Biology. 18: 432-6. PMID 21378964 DOI: 10.1038/nsmb.2003  0.96
2011 Ramakrishnan V. Molecular biology. The eukaryotic ribosome. Science (New York, N.Y.). 331: 681-2. PMID 21310988 DOI: 10.1126/science.1202093  0.96
2010 Voorhees RM, Schmeing TM, Kelley AC, Ramakrishnan V. The mechanism for activation of GTP hydrolysis on the ribosome. Science (New York, N.Y.). 330: 835-8. PMID 21051640 DOI: 10.1126/science.1194460  0.96
2010 Demirci H, Murphy F, Belardinelli R, Kelley AC, Ramakrishnan V, Gregory ST, Dahlberg AE, Jogl G. Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function. Rna (New York, N.Y.). 16: 2319-24. PMID 20962038 DOI: 10.1261/rna.2357210  0.96
2010 Ng CL, Lang K, Meenan NA, Sharma A, Kelley AC, Kleanthous C, Ramakrishnan V. Structural basis for 16S ribosomal RNA cleavage by the cytotoxic domain of colicin E3. Nature Structural & Molecular Biology. 17: 1241-6. PMID 20852642 DOI: 10.1038/nsmb.1896  0.84
2010 Ramakrishnan V. Unraveling the structure of the ribosome (Nobel Lecture). Angewandte Chemie (International Ed. in English). 49: 4355-80. PMID 20535836 DOI: 10.1002/anie.201001436  0.96
2010 Jin H, Weixlbaumer A, Neubauer C, Voorhees R, Petry S, Loakes D, Kelley A, Ramakrishnan V. Insights into Translational Termination from Crystal Structures of the 70S Ribosome Bound to Release Factor Biophysical Journal. 98: 260a. DOI: 10.1016/j.bpj.2009.12.1418  1
2009 Neubauer C, Gao YG, Andersen KR, Dunham CM, Kelley AC, Hentschel J, Gerdes K, Ramakrishnan V, Brodersen DE. The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE. Cell. 139: 1084-95. PMID 20005802 DOI: 10.1016/j.cell.2009.11.015  0.96
2009 Ramakrishnan V. The ribosome: some hard facts about its structure and hot air about its evolution. Cold Spring Harbor Symposia On Quantitative Biology. 74: 25-33. PMID 19955257 DOI: 10.1101/sqb.2009.74.032  0.96
2009 Schmeing TM, Ramakrishnan V. What recent ribosome structures have revealed about the mechanism of translation. Nature. 461: 1234-42. PMID 19838167 DOI: 10.1038/nature08403  0.96
2009 Schmeing TM, Voorhees RM, Kelley AC, Gao YG, Murphy FV, Weir JR, Ramakrishnan V. The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA. Science (New York, N.Y.). 326: 688-94. PMID 19833920 DOI: 10.1126/science.1179700  0.96
2009 Gao YG, Selmer M, Dunham CM, Weixlbaumer A, Kelley AC, Ramakrishnan V. The structure of the ribosome with elongation factor G trapped in the posttranslocational state. Science (New York, N.Y.). 326: 694-9. PMID 19833919 DOI: 10.1126/science.1179709  0.96
2009 Voorhees RM, Weixlbaumer A, Loakes D, Kelley AC, Ramakrishnan V. Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome Nature Structural and Molecular Biology. 16: 528-533. PMID 19363482 DOI: 10.1038/nsmb.1577  1
2009 Schuette JC, Murphy FV, Kelley AC, Weir JR, Giesebrecht J, Connell SR, Loerke J, Mielke T, Zhang W, Penczek PA, Ramakrishnan V, Spahn CM. GTPase activation of elongation factor EF-Tu by the ribosome during decoding. The Embo Journal. 28: 755-65. PMID 19229291 DOI: 10.1038/emboj.2009.26  1
2008 Weixlbaumer A, Jin H, Neubauer C, Voorhees RM, Petry S, Kelley AC, Ramakrishnan V. Insights into translational termination from the structure of RF2 bound to the ribosome Science. 322: 953-956. PMID 18988853 DOI: 10.1126/science.1164840  1
2008 Ramakrishnan V. What we have learned from ribosome structures Biochemical Society Transactions. 36: 567-574. PMID 18631119 DOI: 10.1042/BST0360567  1
2008 Kurata S, Weixlbaumer A, Ohtsuki T, Shimazaki T, Wada T, Kirino Y, Takai K, Watanabe K, Ramakrishnan V, Suzuki T. Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding. The Journal of Biological Chemistry. 283: 18801-11. PMID 18456657 DOI: 10.1074/jbc.M800233200  1
2008 Petry S, Weixlbaumer A, Ramakrishnan V. The termination of translation Current Opinion in Structural Biology. 18: 70-77. PMID 18206363 DOI: 10.1016/j.sbi.2007.11.005  1
2007 Weixlbaumer A, Petry S, Dunham CM, Selmer M, Kelley AC, Ramakrishnan V. Crystal structure of the ribosome recycling factor bound to the ribosome. Nature Structural & Molecular Biology. 14: 733-7. PMID 17660830 DOI: 10.1038/nsmb1282  1
2007 Weixlbaumer A, Murphy FV, Dziergowska A, Malkiewicz A, Vendeix FA, Agris PF, Ramakrishnan V. Mechanism for expanding the decoding capacity of transfer RNAs by modification of uridines. Nature Structural & Molecular Biology. 14: 498-502. PMID 17496902 DOI: 10.1038/nsmb1242  1
2007 Passmore LA, Schmeing TM, Maag D, Applefield DJ, Acker MG, Algire MA, Lorsch JR, Ramakrishnan V. The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. Molecular Cell. 26: 41-50. PMID 17434125 DOI: 10.1016/j.molcel.2007.03.018  1
2007 Dunham CM, Selmer M, Phelps SS, Kelley AC, Suzuki T, Joseph S, Ramakrishnan V. Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit. Rna (New York, N.Y.). 13: 817-23. PMID 17416634 DOI: 10.1261/rna.367307  1
2006 Selmer M, Dunham CM, Murphy FV, Weixlbaumer A, Petry S, Kelley AC, Weir JR, Ramakrishnan V. Structure of the 70S ribosome complexed with mRNA and tRNA. Science (New York, N.Y.). 313: 1935-42. PMID 16959973 DOI: 10.1126/science.1131127  1
2005 Petry S, Brodersen DE, Murphy FV, Dunham CM, Selmer M, Tarry MJ, Kelley AC, Ramakrishnan V. Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon. Cell. 123: 1255-66. PMID 16377566 DOI: 10.1016/j.cell.2005.09.039  1
2005 Ogle JM, Ramakrishnan V. Structural insights into translational fidelity Annual Review of Biochemistry. 74: 129-177. PMID 15952884 DOI: 10.1146/annurev.biochem.74.061903.155440  1
2005 Daviter T, Murphy IV FV, Ramakrishnan V. A renewed focus on transfer RNA Science. 308: 1123-1124. PMID 15905389 DOI: 10.1126/science.1113415  1
2004 Murphy FV, Ramakrishnan V, Malkiewicz A, Agris PF. The role of modifications in codon discrimination by tRNA(Lys)UUU. Nature Structural & Molecular Biology. 11: 1186-91. PMID 15558052 DOI: 10.1038/nsmb861  0.96
2004 Murphy FV, Ramakrishnan V. Structure of a purine-purine wobble base pair in the decoding center of the ribosome. Nature Structural & Molecular Biology. 11: 1251-2. PMID 15558050 DOI: 10.1038/nsmb866  0.96
2004 Razeto A, Ramakrishnan V, Litterst CM, Giller K, Griesinger C, Carlomagno T, Lakomek N, Heimburg T, Lodrini M, Pfitzner E, Becker S. Structure of the NCoA-1/SRC-1 PAS-B Domain Bound to the LXXLL Motif of the STAT6 Transactivation Domain Journal of Molecular Biology. 336: 319-329. PMID 14757047 DOI: 10.1016/j.jmb.2003.12.057  1
2003 Brodersen DE, Clemons WM, Carter AP, Wimberly BT, Ramakrishnan V. Phasing the 30S ribosomal subunit structure. Acta Crystallographica. Section D, Biological Crystallography. 59: 2044-50. PMID 14573961 DOI: 10.1107/S0907444903017669  1
2003 Ogle JM, Carter AP, Ramakrishnan V. Insights into the decoding mechanism from recent ribosome structures. Trends in Biochemical Sciences. 28: 259-66. PMID 12765838 DOI: 10.1016/S0968-0004(03)00066-5  1
2003 Valle M, Gillet R, Kaur S, Henne A, Ramakrishnan V, Frank J. Visualizing tmRNA entry into a stalled ribosome Science. 300: 127-130. PMID 12677067 DOI: 10.1126/science.1081798  1
2003 Brodersen DE, Ramakrishnan V. Shape can be seductive Nature Structural Biology. 10: 78-80. PMID 12555080 DOI: 10.1038/nsb0203-78  1
2002 Ogle JM, Murphy FV, Tarry MJ, Ramakrishnan V. Selection of tRNA by the ribosome requires a transition from an open to a closed form Cell. 111: 721-732. PMID 12464183 DOI: 10.1016/S0092-8674(02)01086-3  1
2002 Ramakrishnan V. Ribosome structure and the mechanism of translation Cell. 108: 557-572. PMID 11909526 DOI: 10.1016/S0092-8674(02)00619-0  1
2002 Brodersen DE, Clemons WM, Carter AP, Wimberly BT, Ramakrishnan V. Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 S RNA. Journal of Molecular Biology. 316: 725-68. PMID 11866529 DOI: 10.1006/jmbi.2001.5359  1
2001 Brodersen DE, Carter AP, Clemons WM, Morgan-Warren RJ, Murphy FV, Ogle JM, Tarry MJ, Wimberly BT, Ramakrishnan V. Atomic structures of the 30S subunit and its complexes with ligands and antibiotics. Cold Spring Harbor Symposia On Quantitative Biology. 66: 17-32. PMID 12762005  1
2001 Clemons WM, Brodersen DE, McCutcheon JP, May JL, Carter AP, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V. Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: purification, crystallization and structure determination. Journal of Molecular Biology. 310: 827-43. PMID 11453691 DOI: 10.1006/jmbi.2001.4778  1
2001 Ogle JM, Brodersen DE, Clemons WM, Tarry MJ, Carter AP, Ramakrishnan V. Recognition of cognate transfer RNA by the 30S ribosomal subunit. Science (New York, N.Y.). 292: 897-902. PMID 11340196 DOI: 10.1126/science.1060612  1
2001 Ramakrishnan V, Moore PB. Atomic structures at last: the ribosome in 2000. Current Opinion in Structural Biology. 11: 144-54. PMID 11297922 DOI: 10.1016/S0959-440X(00)00184-6  1
2001 Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Hartsch T, Wimberly BT, Ramakrishnan V. Crystal structure of an initiation factor bound to the 30S ribosomal subunit. Science (New York, N.Y.). 291: 498-501. PMID 11228145 DOI: 10.1126/science.1057766  1
2000 Brodersen DE, Clemons WM, Carter AP, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V. The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. Cell. 103: 1143-54. PMID 11163189 DOI: 10.1016/S0092-8674(00)00216-6  1
2000 Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V. Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature. 407: 340-8. PMID 11014183 DOI: 10.1038/35030019  1
2000 Wimberly BT, Brodersen DE, Clemons WM, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V. Structure of the 30S ribosomal subunit. Nature. 407: 327-39. PMID 11014182 DOI: 10.1042/bst028a103b  1
2000 Allard P, Rak AV, Wimberly BT, Clemons WM, Kalinin A, Helgstrand M, Garber MB, Ramakrishnan V, Härd T. Another piece of the ribosome: solution structure of S16 and its location in the 30S subunit. Structure (London, England : 1993). 8: 875-82. PMID 10997906 DOI: 10.1016/S0969-2126(00)00177-5  1
2000 Shu F, Ramakrishnan V, Schoenborn BP. Enhanced visibility of hydrogen atoms by neutron crystallography on fully deuterated myoglobin Proceedings of the National Academy of Sciences of the United States of America. 97: 3872-3877. PMID 10725379 DOI: 10.1073/pnas.060024697  1
2000 Ramakrishnan V, Brodersen D, Carter AP, Clemons Jr WM, Morgan-Warren R, Wimberly BT. The structure of a bacterial 30S ribosomal subunit Acta Crystallographica Section a Foundations of Crystallography. 56: s12-s12. DOI: 10.1107/S0108767300021279  0.64
2000 White S, Davies C, Wimberly B, Ramakrishnan V. Structural studies on ribosomal components - insights into the mechanism of translation Biochemical Society Transactions. 28: A103-A103. DOI: 10.1042/bst028a103a  0.48
1999 Angus-Hill ML, Dutnall RN, Tafrov ST, Sternglanz R, Ramakrishnan V. Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily Journal of Molecular Biology. 294: 1311-1325. PMID 10600387 DOI: 10.1006/jmbi.1999.3338  1
1999 Clemons WM, Gowda K, Black SD, Zwieb C, Ramakrishnan V. Crystal structure of the conserved subdomain of human protein SRP54M at 2.1 A resolution: evidence for the mechanism of signal peptide binding. Journal of Molecular Biology. 292: 697-705. PMID 10497032 DOI: 10.1006/jmbi.1999.3090  1
1999 Clemons WM, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V. Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution. Nature. 400: 833-40. PMID 10476960 DOI: 10.1038/23631  1
1999 Wimberly BT, Guymon R, McCutcheon JP, White SW, Ramakrishnan V. A detailed view of a ribosomal active site: the structure of the L11-RNA complex. Cell. 97: 491-502. PMID 10338213 DOI: 10.1016/S0092-8674(00)80759-X  1
1999 McCutcheon JP, Agrawal RK, Philips SM, Grassucci RA, Gerchman SE, Clemons WM, Ramakrishnan V, Frank J. Location of translational initiation factor IF3 on the small ribosomal subunit. Proceedings of the National Academy of Sciences of the United States of America. 96: 4301-6. PMID 10200257 DOI: 10.1073/pnas.96.8.4301  1
1999 Zhou YB, Gerchman SE, Ramakrishnan V, Travers A, Muyldermans S, Ausio J. Position and orientation of the globular domain of linker histone H5 on the nucleosome Chemtracts. 12: 912-919. DOI: 10.1038/26521  1
1998 Dutnall RN, Tafrov ST, Sternglanz R, Ramakrishnan V. Structure of the yeast histone acetyltransferase Hat1: Insights into substrate specificity and implications for the Gcn5-related N- acetyltransferase superfamily Cold Spring Harbor Symposia On Quantitative Biology. 63: 501-507. PMID 10384314  1
1998 Dutnall RN, Tafrov ST, Sternglanz R, Ramakrishnan V. Structure of the histone acetyltransferase Hat1: A paradigm for the GCN5-related N-acetyltransferase superfamily Cell. 94: 427-438. PMID 9727486  1
1998 Davies C, Gerstner RB, Draper DE, Ramakrishnan V, White SW. The crystal structure of ribosomal protein S4 reveals a two-domain molecule with an extensive RNA-binding surface: one domain shows structural homology to the ETS DNA-binding motif. The Embo Journal. 17: 4545-58. PMID 9707415 DOI: 10.1093/emboj/17.16.4545  0.96
1998 Ramakrishnan V, White SW. Ribosomal protein structures: Insights into the architecture, machinery and evolution of the ribosome Trends in Biochemical Sciences. 23: 208-212. PMID 9644974 DOI: 10.1016/S0968-0004(98)01214-6  1
1998 Davies C, Bussiere DE, Golden BL, Porter SJ, Ramakrishnan V, White SW. Ribosomal proteins S5 and L6: high-resolution crystal structures and roles in protein synthesis and antibiotic resistance. Journal of Molecular Biology. 279: 873-88. PMID 9642068 DOI: 10.1006/jmbi.1998.1780  0.96
1998 Clemons WM, Davies C, White SW, Ramakrishnan V. Conformational variability of the N-terminal helix in the structure of ribosomal protein S15. Structure (London, England : 1993). 6: 429-38. PMID 9562554  1
1997 Dutnall RN, Ramakrishnan V. Twists and turns of the nucleosome: Tails without ends Structure. 5: 1255-1259. PMID 9351811  1
1997 Wimberly BT, White SW, Ramakrishnan V. The structure of ribosomal protein S7 at 1.9 Å resolution reveals a β-hairpin motif that binds double-stranded nucleic acids Structure. 5: 1187-1198. PMID 9331418  1
1997 Ramakrishnan V, Biou V. Treatment of multiwavelength anomalous diffraction data as a special case of multiple isomorphous replacement Methods in Enzymology. 276: 538-557. PMID 9048381 DOI: 10.1016/S0076-6879(97)76077-4  1
1996 Shu F, Ramakrishnan V, Schoenborn BP. High-level expression and deuteration of sperm whale myoglobin. A study of its solvent structure by X-ray and neutron diffraction methods Basic Life Sciences. 64: 309-323. PMID 9031516  1
1996 Graziano V, Gerchman SE, Schneider DK, Ramakrishnan V. Neutron scattering studies on chromatin higher-order structure Basic Life Sciences. 64: 127-136. PMID 9031508  1
1996 Davies C, Ramakrishnan V, White SW. Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: Ribosomal protein S8 from Bacillus stearothermophilus at 1.9 Å resolution Structure. 4: 1093-1104. PMID 8805594 DOI: 10.1016/S0969-2126(96)00115-3  1
1996 Davies C, White SW, Ramakrishnan V. The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus Structure. 4: 55-66. PMID 8805509  1
1996 Goytisolo FA, Gerchman SE, Yu X, Rees C, Graziano V, Ramakrishnan V, Thomas JO. Identification of two DNA-binding sites on the globular domain of histone H5 Embo Journal. 15: 3421-3429. PMID 8670844 DOI: 10.1002/j.1460-2075.1996.tb00708.x  1
1996 Hamiche A, Schultz P, Ramakrishnan V, Oudet P, Prunell A. Linker histone-dependent DNA structure in linear mononucleosomes Journal of Molecular Biology. 257: 30-42. PMID 8632457 DOI: 10.1006/jmbi.1996.0144  1
1995 Ramakrishnan V, Davies C, Gerchman SE, Golden BL, Hoffmann DW, Jaishree TN, Kyila JH, Porter S, White SW. Structures of prokaryotic ribosomal proteins: implications for RNA binding and evolution. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 73: 979-86. PMID 8722013  1
1995 Ramakrishnan V. Prokaryotic translation initiation factor if3 is an elongated protein consisting of two crystallizable domains Biochemistry. 34: 6183-6187. PMID 7742323  1
1995 Biou V, Shu F, Ramakrishnan V. X-ray crystallography shows that translational initiation factor IF3 consists of two compact α/β domains linked by an α-helix Embo Journal. 14: 4056-4064. PMID 7664745  1
1994 Hoffman DW, Davies C, Gerchman SE, Kycia JH, Porter SJ, White SW, Ramakrishnan V. Crystal structure of prokaryotic ribosomal protein L9: A bi-lobed RNA-binding protein Embo Journal. 13: 205-212. PMID 8306963 DOI: 10.1002/j.1460-2075.1994.tb06250.x  1
1994 Graziano V, Gerchman SE, Schneider DK, Ramakrishnan V. Histone H1 is located in the interior of the chromatin 30-nm filament Nature. 368: 351-354. PMID 8127372 DOI: 10.1038/368351a0  1
1994 Gerchman SE, Graziano V, Ramakrishnan V. Expression of chicken linker histones in E.coli - Sources of problems and methods for overcoming some of the difficulties Protein Expression and Purification. 5: 242-251. PMID 7950367 DOI: 10.1006/prep.1994.1037  1
1994 Davies C, Gerchman SE, Kycia JH, McGee K, Ramakrishnan V, White SW. Crystallization and preliminary X-ray diffraction studies of bacterial ribosomal protein L14 Acta Crystallographica Section D: Biological Crystallography. 50: 790-792. DOI: 10.1107/S0907444994004117  1
1993 Ramakrishnan V, Finch JT, Graziano V, Lee PL, Sweet RM. Crystal structure of globular domain of histone H5 and its implications for nucleosome binding Nature. 362: 219-223. PMID 8384699 DOI: 10.1038/362219a0  1
1993 Golden BL, Ramakrishnan V, White SW. Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein. The Embo Journal. 12: 4901-8. PMID 8262035  1
1993 Golden BL, Hoffman DW, Ramakrishnan V, White SW. Ribosomal protein S17: characterization of the three-dimensional structure by 1H and 15N NMR. Biochemistry. 32: 12812-20. PMID 8251502 DOI: 10.1021/bi00210a033  1
1993 Cerf C, Lippens G, Muyldermans S, Segers A, Ramakrishnan V, Wodak SJ, Hallenga K, Wyns L. Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: sequential assignment and secondary structure. Biochemistry. 32: 11345-51. PMID 8218199  1
1992 Ramakrishnan V, White SW. The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA Nature. 358: 768-771. PMID 1508272 DOI: 10.1038/358768a0  1
1991 Mangel WF, Lin B, Ramakrishnan V. Conformation of one- and two-chain high molecular weight urokinase analyzed by small-angle neutron scattering and vacuum ultraviolet circular dichroism Journal of Biological Chemistry. 266: 9408-9412. PMID 2033041  1
1991 Ramakrishnan V, Patthy L, Mangel WF. Conformation of Lys-plasminogen and the kringle 1-3 fragment of plasminogen analyzed by small-angle neutron scattering Biochemistry. 30: 3963-3969. PMID 2018765  1
1991 Ramakrishnan V, Gerchman SE. Cloning, sequencing, and overexpression of genes for ribosomal proteins from Bacillus stearothermophilus Journal of Biological Chemistry. 266: 880-885. PMID 1985969  1
1990 Graziano V, Ramakrishnan V. Interaction of HMG14 with chromatin Journal of Molecular Biology. 214: 897-910. PMID 2388273 DOI: 10.1016/0022-2836(90)90344-L  1
1990 Graziano V, Gerchman SE, Wonacott AJ, Sweet RM, Wells JRE, White SW, Ramakrishnan V. Crystallization of the globular domain of histone H5 Journal of Molecular Biology. 212: 253-257. PMID 2181148 DOI: 10.1016/0022-2836(90)90122-3  1
1990 Mangel WF, Lin B, Ramakrishnan V. Characterization of an extremely large, ligand-induced conformational change in plasminogen Science. 248: 69-73. PMID 2108500  1
1988 Graziano V, Gerchman SE, Ramakrishnan V. Reconstitution of chromatin higher-order structure from histone H5 and depleted chromatin Journal of Molecular Biology. 203: 997-1007. PMID 3210247 DOI: 10.1016/0022-2836(88)90124-6  1
1988 Capel MS, Ramakrishnan V. Neutron-scattering topography of proteins of the small ribosomal subunit Methods in Enzymology. 164: 117-131. PMID 3071657  1
1988 Capel M, Engelman D, Freeborn B, Kjeldgaard M, Langer J, Ramakrishnan V, Schindler D, Schneider D, Schoenborn B, Sillers I, Yabuki S, Moore P. A complete mapping of the positions of the proteins in the small ribosomal subunit of escherichia coli Makromolekulare Chemie. Macromolecular Symposia. 15: 123-130. DOI: 10.1002/masy.19880150109  0.92
1987 Gerchman SE, Ramakrishnan V. Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopy Proceedings of the National Academy of Sciences of the United States of America. 84: 7802-7806. PMID 3479765  1
1987 Capel MS, Engelman DM, Freeborn BR, Kjeldgaard M, Langer JA, Ramakrishnan V, Schindler DG, Schneider DK, Schoenborn BP, Sillers IY. A complete mapping of the proteins in the small ribosomal subunit of Escherichia coli. Science (New York, N.Y.). 238: 1403-6. PMID 3317832  1
1986 Ramakrishnan V, Graziano V, Capel MS. A role for protein S3 and S14 in the 30 S ribosomal subunit Journal of Biological Chemistry. 261: 15049-15052. PMID 3533932  1
1986 Ramakrishnan V. Distribution of protein and RNA in the 30S ribosomal subunit Science. 231: 1562-1564. PMID 3513310  1
1986 Schoenborn BP, Ramakrishnan V, Schneider D. Hydrogen-deuterium exchange in structural biology Physica B+C. 137: 214-220. DOI: 10.1016/0378-4363(86)90325-6  1
1985 Ramakrishnan V. SCATTERING STUDIES ON RIBOSOMES IN SOLUTION Physica B: Physics of Condensed Matter & C: Atomic, Molecular and Plasma Physics, Optics. 136: 232-235. DOI: 10.1016/S0378-4363(86)80063-8  1
1984 Wobbe CR, Mitra S, Ramakrishnan V. Structure of the capsid of Kilham rat virus from small-angle neutron scattering Biochemistry. 23: 6565-6569. PMID 6529570 DOI: 10.1021/bi00321a044  1
1984 Ramakrishnan V, Capel M, Kjeldgaard M, Engelman DM, Moore PB. Positions of proteins S14, S18 and S20 in the 30 S ribosomal subunit of Escherichia coli. Journal of Molecular Biology. 174: 265-84. PMID 6371250 DOI: 10.1016/0022-2836(84)90338-3  1
1984 Moore PB, Engelman DM, Langer JA, Ramakrishnan VR, Schindler DG, Schoenborn BP, Sillers IY, Yabuki S. Neutron scattering and the 30 S ribosomal subunit of E. coli. Basic Life Sciences. 27: 73-91. PMID 6370225 DOI: 10.1007/978-1-4899-0375-4_4  1
1984 Bunick GJ, Uberbacher EC, Ramakrishnan V. Structural analysis of HMG 17 - nucleosomes by small-angle neutron scattering Federation Proceedings. 43: no. 3559.  1
1983 Ramakrishnan VR, Darszon A, Montal M. A small angle x-ray scattering study of a rhodopsin-lipid complex in hexane. The Journal of Biological Chemistry. 258: 4857-60. PMID 6833280  1
1983 Uberbacher EC, Ramakrishnan V, Olins DE, Bunick GJ. Neutron scattering studies of nucleosome structure at low ionic strength Biochemistry. 22: 4916-4923. PMID 6639936  1
1981 Ramakrishnan VR, Yabuki S, Sillers IY, Schindler DG, Engelman DM, Moore PB. Positions of proteins S6, S11 and S15 in the 30 S ribosomal subunit of Escherichia coli. Journal of Molecular Biology. 153: 739-60. PMID 7040690 DOI: 10.1016/0022-2836(81)90416-2  1
1981 Ramakrishnan VR, Moore PB. Analysis of neutron distance data. Journal of Molecular Biology. 153: 719-38. PMID 7040689 DOI: 10.1016/0022-2836(81)90415-0  1
1980 Ramakrishnan V, Darszon A, Philipp M, Montal M. Rhodopsin in model membranes: the kinetics of channel opening and closing in rhodopsin-containing planar lipid bilayers. Annals of the New York Academy of Sciences. 358: 36-42. PMID 6260000  1
1977 Ramakrishnan V, Tanaka T. Green's-function theory of the ferroelectric phase transition in potassium dihydrogen phosphate (KDP) Physical Review B. 16: 422-426. DOI: 10.1103/PhysRevB.16.422  1
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