Nuria Plattner - Publications

Affiliations: 
University of Basel, Basel, Basel-Stadt, Switzerland 

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Scherer MK, Trendelkamp-Schroer B, Paul F, Pérez-Hernández G, Hoffmann M, Plattner N, Wehmeyer C, Prinz JH, Noé F. PyEMMA 2: A Software Package for Estimation, Validation, and Analysis of Markov Models. Journal of Chemical Theory and Computation. 11: 5525-42. PMID 26574340 DOI: 10.1021/Acs.Jctc.5B00743  1
2015 Reubold TF, Faelber K, Plattner N, Posor Y, Ketel K, Curth U, Schlegel J, Anand R, Manstein DJ, Noé F, Haucke V, Daumke O, Eschenburg S. Crystal structure of the dynamin tetramer. Nature. 525: 404-8. PMID 26302298 DOI: 10.1038/Nature14880  1
2015 Plattner N, Noé F. Protein conformational plasticity and complex ligand-binding kinetics explored by atomistic simulations and Markov models. Nature Communications. 6: 7653. PMID 26134632 DOI: 10.1038/Ncomms8653  1
2014 Hédin F, Plattner N, Doll JD, Meuwly M. Spatial Averaging: Sampling Enhancement for Exploring Configurational Space of Atomic Clusters and Biomolecules. Journal of Chemical Theory and Computation. 10: 4284-96. PMID 26588125 DOI: 10.1021/Ct500529W  1
2014 Plattner N, Meuwly M. The effect of classical and quantum dynamics on vibrational frequency shifts of H2 in clathrate hydrates. The Journal of Chemical Physics. 140: 024311. PMID 24437881 DOI: 10.1063/1.4859856  1
2014 Plattner N, Meuwly M. The effect of classical and quantum dynamics on vibrational frequency shifts of H2 in clathrate hydrates Journal of Chemical Physics. 140. DOI: 10.1063/1.4859856  1
2014 Hédin F, Plattner N, Doll JD, Meuwly M. Spatial averaging: Sampling enhancement for exploring configurational space of atomic clusters and biomolecules Journal of Chemical Theory and Computation. 10: 4284-4296. DOI: 10.1021/ct500529w  1
2013 Plattner N, Doll JD, Meuwly M. Overcoming the Rare Event Sampling Problem in Biological Systems with Infinite Swapping. Journal of Chemical Theory and Computation. 9: 4215-24. PMID 26592410 DOI: 10.1021/Ct400355G  1
2013 Noé F, Wu H, Prinz JH, Plattner N. Projected and hidden Markov models for calculating kinetics and metastable states of complex molecules. The Journal of Chemical Physics. 139: 184114. PMID 24320261 DOI: 10.1063/1.4828816  1
2013 Plattner N, Doll JD, Meuwly M. Overcoming the rare event sampling problem in biological systems with infinite swapping Journal of Chemical Theory and Computation. 9: 4215-4224. DOI: 10.1021/ct400355g  1
2012 Doll JD, Plattner N, Freeman DL, Liu Y, Dupuis P. Rare-event sampling: occupation-based performance measures for parallel tempering and infinite swapping Monte Carlo methods. The Journal of Chemical Physics. 137: 204112. PMID 23205986 DOI: 10.1063/1.4765060  1
2012 Lee MW, Plattner N, Meuwly M. Structure, spectroscopy and dynamics of layered H2O and CO 2 ices Physical Chemistry Chemical Physics. 14: 15464-15474. PMID 23072896 DOI: 10.1039/C2Cp41904A  1
2012 Plattner N, Meuwly M. Quantifying the importance of protein conformation on ligand migration in myoglobin Biophysical Journal. 102: 333-341. PMID 22339870 DOI: 10.1016/J.Bpj.2011.10.058  1
2012 Dupuis P, Liu Y, Plattner N, Doll JD. On the infinite swapping limit for parallel tempering Multiscale Modeling and Simulation. 10: 986-1022. DOI: 10.1137/110853145  1
2012 Plattner N, Kunikeev S, Freeman DL, Doll JD. Numerical investigation of the cumulant expansion for fourier path integrals Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7134: 13-22. DOI: 10.1007/978-3-642-28145-7_2  1
2011 Plattner N, Doll JD, Dupuis P, Wang H, Liu Y, Gubernatis JE. An infinite swapping approach to the rare-event sampling problem. The Journal of Chemical Physics. 135: 134111. PMID 21992286 DOI: 10.1063/1.3643325  1
2010 Plattner N, Lee MW, Meuwly M. Structural and spectroscopic characterization of mixed planetary ices. Faraday Discussions. 147: 217-30; discussion 2. PMID 21302549 DOI: 10.1039/C003487H  1
2010 Plattner N, Doll JD, Meuwly M. Spatial averaging for small molecule diffusion in condensed phase environments. The Journal of Chemical Physics. 133: 044506. PMID 20687662 DOI: 10.1063/1.3458639  1
2010 Plattner N, Lee MW, Meuwly M. Structural and spectroscopic characterization of mixed planetary ices Faraday Discussions. 147: 217-230. DOI: 10.1039/c003487h  1
2009 Devereux M, Plattner N, Meuwly M. Application of multipolar charge models and molecular dynamics simulations to study stark shifts in inhomogeneous electric fields Journal of Physical Chemistry A. 113: 13199-13209. PMID 19681623 DOI: 10.1021/Jp903954T  1
2009 Plattner N, Meuwly M. Higher order multipole moments for molecular dynamics simulations Journal of Molecular Modeling. 15: 687-694. PMID 19263099 DOI: 10.1007/S00894-009-0465-6  1
2009 Doll JD, Gubernatis JE, Plattner N, Meuwly M, Dupuis P, Wang H. A spatial averaging approach to rare-event sampling Journal of Chemical Physics. 131. DOI: 10.1063/1.3220629  1
2008 Plattner N, Meuwly M. Atomistic simulations of CO vibrations in ices relevant to astrochemistry Chemphyschem. 9: 1271-1277. PMID 18478513 DOI: 10.1002/Cphc.200800030  1
2008 Plattner N, Meuwly M. The role of higher CO-multipole moments in understanding the dynamics of photodissociated carbonmonoxide in myoglobin Biophysical Journal. 94: 2505-2515. PMID 18178640 DOI: 10.1529/Biophysj.107.120519  1
2008 Plattner N, Bandi T, Doll JD, Freeman DL, Meuwly M. MD simulations using distributed multipole electrostatics: Structural and spectroscopic properties of CO- and methane-containing clathrates Molecular Physics. 106: 1675-1684. DOI: 10.1080/00268970802314394  1
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