Tariq M. Rana - Publications

Affiliations: 
Rutgers University, New Brunswick, United States 
Area:
Biochemistry, Pharmacology

124 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Zhou Y, Dang J, Chang KY, Yau E, Aza-Blanc P, Moscat J, Rana TM. miR-1298 Inhibits Mutant KRAS-Driven Tumor Growth by Repressing FAK and LAMB3. Cancer Research. 76: 5777-5787. PMID 27698189 DOI: 10.1158/0008-5472.CAN-15-2936  0.96
2016 Mohammed I, Kummetha IR, Singh G, Sharova N, Lichinchi G, Dang J, Stevenson M, Rana TM. 1,2,3-Triazoles as Amide Bioisosteres: Discovery of a New Class of Potent HIV-1 Vif Antagonists. Journal of Medicinal Chemistry. PMID 27509004 DOI: 10.1021/acs.jmedchem.6b00247  0.96
2016 Yang CS, Chang KY, Dang J, Rana TM. Polycomb Group Protein Pcgf6 Acts as a Master Regulator to Maintain Embryonic Stem Cell Identity. Scientific Reports. 6: 26899. PMID 27247273 DOI: 10.1038/srep26899  0.96
2016 Dang J, Tiwari SK, Lichinchi G, Qin Y, Patil VS, Eroshkin AM, Rana TM. Zika Virus Depletes Neural Progenitors in Human Cerebral Organoids through Activation of the Innate Immune Receptor TLR3. Cell Stem Cell. PMID 27162029 DOI: 10.1016/j.stem.2016.04.014  0.96
2015 Lin N, Dang J, Rana TM. Haunting the HOXA Locus: Two Faces of lncRNA Regulation. Cell Stem Cell. 16: 449-50. PMID 25957895 DOI: 10.1016/j.stem.2015.04.010  0.96
2015 McCarroll JA, Dwarte T, Baigude H, Dang J, Yang L, Erlich RB, Kimpton K, Teo J, Sagnella SM, Akerfeldt MC, Liu J, Phillips PA, Rana TM, Kavallaris M. Therapeutic targeting of polo-like kinase 1 using RNA-interfering nanoparticles (iNOPs) for the treatment of non-small cell lung cancer. Oncotarget. 6: 12020-34. PMID 25557168  0.96
2015 Han J, Cai J, Borjihan W, Ganbold T, Rana TM, Baigude H. Preparation of novel curdlan nanoparticles for intracellular siRNA delivery. Carbohydrate Polymers. 117: 324-30. PMID 25498642 DOI: 10.1016/j.carbpol.2014.09.069  0.96
2014 Baigude H, Rana TM. Strategies to antagonize miRNA functions in vitro and in vivo. Nanomedicine (London, England). 9: 2545-55. PMID 25490425 DOI: 10.2217/nnm.14.162  0.96
2014 Li Z, Rana TM. Decoding the noncoding: prospective of lncRNA-mediated innate immune regulation. Rna Biology. 11: 979-85. PMID 25482890 DOI: 10.4161/rna.29937  0.96
2014 Li Z, Dang J, Chang KY, Rana TM. MicroRNA-mediated regulation of extracellular matrix formation modulates somatic cell reprogramming. Rna (New York, N.Y.). 20: 1900-15. PMID 25336587 DOI: 10.1261/rna.043745.113  0.96
2014 Yang CS, Chang KY, Rana TM. Genome-wide functional analysis reveals factors needed at the transition steps of induced reprogramming. Cell Reports. 8: 327-37. PMID 25043178 DOI: 10.1016/j.celrep.2014.07.002  0.96
2014 Li Z, Rana TM. Therapeutic targeting of microRNAs: current status and future challenges. Nature Reviews. Drug Discovery. 13: 622-38. PMID 25011539 DOI: 10.1038/nrd4359  0.96
2014 Sakurai K, Talukdar I, Patil VS, Dang J, Li Z, Chang KY, Lu CC, Delorme-Walker V, Dermardirossian C, Anderson K, Hanein D, Yang CS, Wu D, Liu Y, Rana TM. Kinome-wide functional analysis highlights the role of cytoskeletal remodeling in somatic cell reprogramming. Cell Stem Cell. 14: 523-34. PMID 24702998 DOI: 10.1016/j.stem.2014.03.001  0.96
2014 Lin N, Chang KY, Li Z, Gates K, Rana ZA, Dang J, Zhang D, Han T, Yang CS, Cunningham TJ, Head SR, Duester G, Dong PD, Rana TM. An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment. Molecular Cell. 53: 1005-19. PMID 24530304 DOI: 10.1016/j.molcel.2014.01.021  0.96
2014 Li Z, Chao TC, Chang KY, Lin N, Patil VS, Shimizu C, Head SR, Burns JC, Rana TM. The long noncoding RNA THRIL regulates TNFα expression through its interaction with hnRNPL. Proceedings of the National Academy of Sciences of the United States of America. 111: 1002-7. PMID 24371310 DOI: 10.1073/pnas.1313768111  0.96
2014 Patil VS, Zhou R, Rana TM. Gene regulation by non-coding RNAs. Critical Reviews in Biochemistry and Molecular Biology. 49: 16-32. PMID 24164576 DOI: 10.3109/10409238.2013.844092  0.96
2013 Henzler CM, Li Z, Dang J, Arcila ML, Zhou H, Liu J, Chang KY, Bassett DS, Rana TM, Kosik KS. Staged miRNA re-regulation patterns during reprogramming. Genome Biology. 14: R149. PMID 24380417 DOI: 10.1186/gb-2013-14-12-r149  0.96
2013 Baigude H, Su J, McCarroll J, Rana TM. In Vivo Delivery of RNAi by Reducible Interfering Nanoparticles (iNOPs). Acs Medicinal Chemistry Letters. 4: 720-723. PMID 24319542 DOI: 10.1021/ml4001003  0.96
2013 Silver NW, King BM, Nalam MN, Cao H, Ali A, Kiran Kumar Reddy GS, Rana TM, Schiffer CA, Tidor B. Efficient Computation of Small-Molecule Configurational Binding Entropy and Free Energy Changes by Ensemble Enumeration. Journal of Chemical Theory and Computation. 9: 5098-5115. PMID 24250277 DOI: 10.1021/ct400383v  0.96
2013 Xiong XP, Kurthkoti K, Chang KY, Lichinchi G, De N, Schneemann A, MacRae IJ, Rana TM, Perrimon N, Zhou R. Core small nuclear ribonucleoprotein particle splicing factor SmD1 modulates RNA interference in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 110: 16520-5. PMID 24067655 DOI: 10.1073/pnas.1315803110  0.96
2013 Nalam MN, Ali A, Reddy GS, Cao H, Anjum SG, Altman MD, Yilmaz NK, Tidor B, Rana TM, Schiffer CA. Substrate envelope-designed potent HIV-1 protease inhibitors to avoid drug resistance. Chemistry & Biology. 20: 1116-24. PMID 24012370 DOI: 10.1016/j.chembiol.2013.07.014  0.96
2013 Shen Y, Altman MD, Ali A, Nalam MN, Cao H, Rana TM, Schiffer CA, Tidor B. Testing the substrate-envelope hypothesis with designed pairs of compounds. Acs Chemical Biology. 8: 2433-41. PMID 23952265 DOI: 10.1021/cb400468c  0.96
2013 Zhou R, Rana TM. RNA-based mechanisms regulating host-virus interactions. Immunological Reviews. 253: 97-111. PMID 23550641 DOI: 10.1111/imr.12053  0.96
2013 Yang CS, Rana TM. Learning the molecular mechanisms of the reprogramming factors: let's start from microRNAs. Molecular Biosystems. 9: 10-7. PMID 23037570 DOI: 10.1039/c2mb25088h  0.96
2013 Lin N, Rana TM. Dysregulation of long non-coding RNAs in human disease Molecular Biology of Long Non-Coding Rnas. 115-136. DOI: 10.1007/978-1-4614-8621-3_5  0.96
2012 Mohammed I, Parai MK, Jiang X, Sharova N, Singh G, Stevenson M, Rana TM. SAR and Lead Optimization of an HIV-1 Vif-APOBEC3G Axis Inhibitor. Acs Medicinal Chemistry Letters. 3: 465-469. PMID 24533175 DOI: 10.1021/ml300037k  0.96
2012 Li Z, Rana TM. A kinase inhibitor screen identifies small-molecule enhancers of reprogramming and iPS cell generation. Nature Communications. 3: 1085. PMID 23011139 DOI: 10.1038/ncomms2059  0.96
2012 Parai MK, Huggins DJ, Cao H, Nalam MN, Ali A, Schiffer CA, Tidor B, Rana TM. Design, synthesis, and biological and structural evaluations of novel HIV-1 protease inhibitors to combat drug resistance. Journal of Medicinal Chemistry. 55: 6328-41. PMID 22708897 DOI: 10.1021/jm300238h  0.96
2012 Baigude H, Rana TM. Interfering nanoparticles for silencing microRNAs. Methods in Enzymology. 509: 339-53. PMID 22568914 DOI: 10.1016/B978-0-12-391858-1.00017-4  0.96
2012 Baigude H, Ahsanullah, Li Z, Zhou Y, Rana TM. miR-TRAP: a benchtop chemical biology strategy to identify microRNA targets. Angewandte Chemie (International Ed. in English). 51: 5880-3. PMID 22566243 DOI: 10.1002/anie.201201512  0.96
2012 Ali A, Wang J, Nathans RS, Cao H, Sharova N, Stevenson M, Rana TM. Synthesis and structure-activity relationship studies of HIV-1 virion infectivity factor (Vif) inhibitors that block viral replication. Chemmedchem. 7: 1217-29. PMID 22555953 DOI: 10.1002/cmdc.201200079  0.96
2012 Zhou H, Arcila ML, Li Z, Lee EJ, Henzler C, Liu J, Rana TM, Kosik KS. Deep annotation of mouse iso-miR and iso-moR variation. Nucleic Acids Research. 40: 5864-75. PMID 22434881 DOI: 10.1093/nar/gks247  0.96
2012 Li Z, Rana TM. Using microRNAs to enhance the generation of induced pluripotent stem cells. Current Protocols in Stem Cell Biology. Unit 4A.4. PMID 22415842 DOI: 10.1002/9780470151808.sc04a04s20  0.96
2012 Li Z, Rana TM. Molecular mechanisms of RNA-triggered gene silencing machineries. Accounts of Chemical Research. 45: 1122-31. PMID 22304792 DOI: 10.1021/ar200253u  0.96
2012 O'Brien SK, Knight KL, Rana TM. Phosphorylation of histone H1 by P-TEFb is a necessary step in skeletal muscle differentiation. Journal of Cellular Physiology. 227: 383-9. PMID 21503884 DOI: 10.1002/jcp.22797  0.96
2011 Yang CS, Lopez CG, Rana TM. Discovery of nonsteroidal anti-inflammatory drug and anticancer drug enhancing reprogramming and induced pluripotent stem cell generation. Stem Cells (Dayton, Ohio). 29: 1528-36. PMID 21898684 DOI: 10.1002/stem.717  0.96
2011 Yang CS, Li Z, Rana TM. microRNAs modulate iPS cell generation. Rna (New York, N.Y.). 17: 1451-60. PMID 21693621 DOI: 10.1261/rna.2664111  0.96
2011 Li Z, Yang CS, Nakashima K, Rana TM. Small RNA-mediated regulation of iPS cell generation. The Embo Journal. 30: 823-34. PMID 21285944 DOI: 10.1038/emboj.2011.2  0.96
2011 Su J, Baigude H, McCarroll J, Rana TM. Silencing microRNA by interfering nanoparticles in mice. Nucleic Acids Research. 39: e38. PMID 21212128 DOI: 10.1093/nar/gkq1307  0.96
2010 Ali A, Reddy GS, Nalam MN, Anjum SG, Cao H, Schiffer CA, Rana TM. Structure-based design, synthesis, and structure-activity relationship studies of HIV-1 protease inhibitors incorporating phenyloxazolidinones. Journal of Medicinal Chemistry. 53: 7699-708. PMID 20958050 DOI: 10.1021/jm1008743  0.96
2010 Lu CC, Li Z, Chu CY, Feng J, Feng J, Sun R, Rana TM. MicroRNAs encoded by Kaposi's sarcoma-associated herpesvirus regulate viral life cycle. Embo Reports. 11: 784-90. PMID 20847741 DOI: 10.1038/embor.2010.132  0.96
2010 Ghosh A, Mukherjee K, Jiang X, Zhou Y, McCarroll J, Qu J, Swain PM, Baigude H, Rana TM. Design and assembly of new nonviral RNAi delivery agents by microwave-assisted quaternization (MAQ) of tertiary amines. Bioconjugate Chemistry. 21: 1581-7. PMID 20722369 DOI: 10.1021/bc900482r  0.96
2010 James V, Zhang Y, Foxler DE, de Moor CH, Kong YW, Webb TM, Self TJ, Feng Y, Lagos D, Chu CY, Rana TM, Morley SJ, Longmore GD, Bushell M, Sharp TV. LIM-domain proteins, LIMD1, Ajuba, and WTIP are required for microRNA-mediated gene silencing. Proceedings of the National Academy of Sciences of the United States of America. 107: 12499-504. PMID 20616046 DOI: 10.1073/pnas.0914987107  0.96
2010 O'Brien SK, Cao H, Nathans R, Ali A, Rana TM. P-TEFb kinase complex phosphorylates histone H1 to regulate expression of cellular and HIV-1 genes. The Journal of Biological Chemistry. 285: 29713-20. PMID 20551309 DOI: 10.1074/jbc.M110.125997  0.96
2010 McCarroll J, Baigude H, Yang CS, Rana TM. Nanotubes functionalized with lipids and natural amino acid dendrimers: a new strategy to create nanomaterials for delivering systemic RNAi. Bioconjugate Chemistry. 21: 56-63. PMID 19957956 DOI: 10.1021/bc900296z  0.96
2009 Baigude H, Rana TM. Delivery of therapeutic RNAi by nanovehicles. Chembiochem : a European Journal of Chemical Biology. 10: 2449-54. PMID 19688785 DOI: 10.1002/cbic.200900252  0.96
2009 Ali A, Ghosh A, Nathans RS, Sharova N, O'Brien S, Cao H, Stevenson M, Rana TM. Identification of flavopiridol analogues that selectively inhibit positive transcription elongation factor (P-TEFb) and block HIV-1 replication. Chembiochem : a European Journal of Chemical Biology. 10: 2072-80. PMID 19603446 DOI: 10.1002/cbic.200900303  0.96
2009 Nathans R, Chu CY, Serquina AK, Lu CC, Cao H, Rana TM. Cellular microRNA and P bodies modulate host-HIV-1 interactions. Molecular Cell. 34: 696-709. PMID 19560422 DOI: 10.1016/j.molcel.2009.06.003  0.96
2009 Bélanger F, Baigude H, Rana TM. U30 of 7SK RNA forms a specific photo-cross-link with Hexim1 in the context of both a minimal RNA-binding site and a fully reconstituted 7SK/Hexim1/P-TEFb ribonucleoprotein complex. Journal of Molecular Biology. 386: 1094-107. PMID 19244621 DOI: 10.1016/j.jmb.2009.01.015  0.96
2009 Baigude H, Rana TM. Delivery of therapeutic RNAi by nanovehicles (ChemBioChem (2009) 10, (2449-2454)) Chembiochem. 10: 2685. DOI: 10.1002/cbic.200990079  0.96
2008 Nathans R, Cao H, Sharova N, Ali A, Sharkey M, Stranska R, Stevenson M, Rana TM. Small-molecule inhibition of HIV-1 Vif. Nature Biotechnology. 26: 1187-92. PMID 18806783 DOI: 10.1038/nbt.1496  0.96
2008 Cao H, Yang CS, Rana TM. Evolutionary emergence of microRNAs in human embryonic stem cells. Plos One. 3: e2820. PMID 18665260 DOI: 10.1371/journal.pone.0002820  0.96
2008 Chu CY, Rana TM. Potent RNAi by short RNA triggers. Rna (New York, N.Y.). 14: 1714-9. PMID 18658119 DOI: 10.1261/rna.1161908  0.96
2008 Wang H, Ghosh A, Baigude H, Yang CS, Qiu L, Xia X, Zhou H, Rana TM, Xu Z. Therapeutic gene silencing delivered by a chemically modified small interfering RNA against mutant SOD1 slows amyotrophic lateral sclerosis progression. The Journal of Biological Chemistry. 283: 15845-52. PMID 18367449 DOI: 10.1074/jbc.M800834200  0.96
2007 Reddy GS, Ali A, Nalam MN, Anjum SG, Cao H, Nathans RS, Schiffer CA, Rana TM. Design and synthesis of HIV-1 protease inhibitors incorporating oxazolidinones as P2/P2' ligands in pseudosymmetric dipeptide isosteres. Journal of Medicinal Chemistry. 50: 4316-28. PMID 17696512 DOI: 10.1021/jm070284z  0.96
2007 Chu CY, Rana TM. Small RNAs: regulators and guardians of the genome. Journal of Cellular Physiology. 213: 412-9. PMID 17674365 DOI: 10.1002/jcp.21230  0.96
2007 Robb GB, Rana TM. RNA helicase A interacts with RISC in human cells and functions in RISC loading. Molecular Cell. 26: 523-37. PMID 17531811 DOI: 10.1016/j.molcel.2007.04.016  0.96
2007 Chiu YL, Cao H, Rana TM. Quantitative analysis of RNA-mediated protein-protein interactions in living cells by FRET. Chemical Biology & Drug Design. 69: 233-9. PMID 17461970 DOI: 10.1111/j.1747-0285.2007.00501.x  0.96
2007 Baigude H, McCarroll J, Yang CS, Swain PM, Rana TM. Design and creation of new nanomaterials for therapeutic RNAi. Acs Chemical Biology. 2: 237-41. PMID 17432823 DOI: 10.1021/cb7000582  0.96
2007 Rana TM. Illuminating the silence: understanding the structure and function of small RNAs. Nature Reviews. Molecular Cell Biology. 8: 23-36. PMID 17183358 DOI: 10.1038/nrm2085  0.96
2006 Ali A, Reddy GS, Cao H, Anjum SG, Nalam MN, Schiffer CA, Rana TM. Discovery of HIV-1 protease inhibitors with picomolar affinities incorporating N-aryl-oxazolidinone-5-carboxamides as novel P2 ligands. Journal of Medicinal Chemistry. 49: 7342-56. PMID 17149864 DOI: 10.1021/jm060666p  0.96
2006 Richter SN, Bélanger F, Zheng P, Rana TM. Dynamics of nascent mRNA folding and RNA-protein interactions: an alternative TAR RNA structure is involved in the control of HIV-1 mRNA transcription. Nucleic Acids Research. 34: 4278-92. PMID 16920743 DOI: 10.1093/nar/gkl499  0.96
2006 Chu CY, Rana TM. Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54. Plos Biology. 4: e210. PMID 16756390 DOI: 10.1371/journal.pbio.0040210  0.96
2006 Wichroski MJ, Robb GB, Rana TM. Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies. Plos Pathogens. 2: e41. PMID 16699599 DOI: 10.1371/journal.ppat.0020041  0.96
2006 Cao H, Tamilarasu N, Rana TM. Orientation and affinity of HIV-1 Tat fragments in Tat-TAR complex determined by fluorescence resonance energy transfer. Bioconjugate Chemistry. 17: 352-8. PMID 16536465 DOI: 10.1021/bc050277u  0.96
2005 Lee CW, Cao H, Ichiyama K, Rana TM. Design and synthesis of a novel peptidomimetic inhibitor of HIV-1 Tat-TAR interactions: squaryldiamide as a new potential bioisostere of unsubstituted guanidine. Bioorganic & Medicinal Chemistry Letters. 15: 4243-6. PMID 16054360 DOI: 10.1016/j.bmcl.2005.06.077  0.96
2005 Chiu YL, Dinesh CU, Chu CY, Ali A, Brown KM, Cao H, Rana TM. Dissecting RNA-interference pathway with small molecules. Chemistry & Biology. 12: 643-8. PMID 15975509 DOI: 10.1016/j.chembiol.2005.04.016  0.96
2005 Brown KM, Chu CY, Rana TM. Target accessibility dictates the potency of human RISC. Nature Structural & Molecular Biology. 12: 469-70. PMID 15852021 DOI: 10.1038/nsmb931  0.96
2005 Lee HK, Cao H, Rana TM. Design, microwave-assisted synthesis, and photophysical properties of small molecule organic antennas for luminescence resonance energy transfer. Journal of Combinatorial Chemistry. 7: 279-84. PMID 15762757 DOI: 10.1021/cc0498480  0.96
2005 Ping YH, Rana TM. Mechanism of site-specific psoralen photoadducts formation in triplex DNA directed by psoralen-conjugated oligonucleotides. Biochemistry. 44: 2501-9. PMID 15709762 DOI: 10.1021/bi0488707  0.96
2005 Robb GB, Brown KM, Khurana J, Rana TM. Specific and potent RNAi in the nucleus of human cells. Nature Structural & Molecular Biology. 12: 133-7. PMID 15643423 DOI: 10.1038/nsmb886  0.96
2005 Wichroski MJ, Ichiyama K, Rana TM. Analysis of HIV-1 viral infectivity factor-mediated proteasome-dependent depletion of APOBEC3G: correlating function and subcellular localization. The Journal of Biological Chemistry. 280: 8387-96. PMID 15537645 DOI: 10.1074/jbc.M408048200  0.96
2004 Ping YH, Chu CY, Cao H, Jacque JM, Stevenson M, Rana TM. Modulating HIV-1 replication by RNA interference directed against human transcription elongation factor SPT5. Retrovirology. 1: 46. PMID 15620346 DOI: 10.1186/1742-4690-1-46  0.96
2004 Chiu YL, Ali A, Chu CY, Cao H, Rana TM. Visualizing a correlation between siRNA localization, cellular uptake, and RNAi in living cells. Chemistry & Biology. 11: 1165-75. PMID 15324818 DOI: 10.1016/j.chembiol.2004.06.006  0.96
2004 Lee HK, Rana TM. Microwave-assisted parallel synthesis of a 4,6-diamino-2,2-dimethyl-1,2-dihydro-1-phenyl-s-triazine library. Journal of Combinatorial Chemistry. 6: 504-8. PMID 15244411 DOI: 10.1021/cc049950x  0.96
2004 Zhang L, Rana TM. Solid-phase synthesis of alpha-(2-(benzylthio)-1,4-dihydro-6-methyl-4-p-tolylpyrimidine-5-carboxamido) acids: a new strategy to create diversity in heterocyclic scaffolds. Journal of Combinatorial Chemistry. 6: 457-9. PMID 15244403 DOI: 10.1021/cc034064s  0.96
2004 Chiu YL, Cao H, Jacque JM, Stevenson M, Rana TM. Inhibition of human immunodeficiency virus type 1 replication by RNA interference directed against human transcription elongation factor P-TEFb (CDK9/CyclinT1). Journal of Virology. 78: 2517-29. PMID 14963154 DOI: 10.1128/JVI.78.5.2517-2529.2004  0.96
2003 Gelman MA, Richter S, Cao H, Umezawa N, Gellman SH, Rana TM. Selective binding of TAR RNA by a Tat-derived beta-peptide. Organic Letters. 5: 3563-5. PMID 14507173 DOI: 10.1021/ol034977v  0.96
2003 Chiu YL, Rana TM. siRNA function in RNAi: a chemical modification analysis. Rna (New York, N.Y.). 9: 1034-48. PMID 12923253 DOI: 10.1261/rna.5103703  0.96
2003 Hwang S, Tamilarasu N, Kibler K, Cao H, Ali A, Ping YH, Jeang KT, Rana TM. Discovery of a small molecule Tat-trans-activation-responsive RNA antagonist that potently inhibits human immunodeficiency virus-1 replication. The Journal of Biological Chemistry. 278: 39092-103. PMID 12857725 DOI: 10.1074/jbc.M301749200  0.96
2003 Hamma T, Saleh A, Huq I, Rana TM, Miller PS. Inhibition of HIV tat-TAR interactions by an antisense oligo-2'-O-methylribonucleoside methylphosphonate. Bioorganic & Medicinal Chemistry Letters. 13: 1845-8. PMID 12749881 DOI: 10.1016/S0960-894X(03)00323-8  0.96
2002 Kesavan V, Tamilarasu N, Cao H, Rana TM. A new class of RNA-binding oligomers: peptoid amide and ester analogues. Bioconjugate Chemistry. 13: 1171-5. PMID 12440849 DOI: 10.1021/bc0255642  0.96
2002 Chiu YL, Ho CK, Saha N, Schwer B, Shuman S, Rana TM. Tat stimulates cotranscriptional capping of HIV mRNA. Molecular Cell. 10: 585-97. PMID 12408826 DOI: 10.1016/S1097-2765(02)00630-5  0.96
2002 Chiu YL, Rana TM. RNAi in human cells: basic structural and functional features of small interfering RNA. Molecular Cell. 10: 549-61. PMID 12408823 DOI: 10.1016/S1097-2765(02)00652-4  0.96
2002 Zhou C, Rana TM. A bimolecular mechanism of HIV-1 Tat protein interaction with RNA polymerase II transcription elongation complexes. Journal of Molecular Biology. 320: 925-42. PMID 12126615 DOI: 10.1016/S0022-2836(02)00556-9  0.96
2002 Richter S, Ping YH, Rana TM. TAR RNA loop: a scaffold for the assembly of a regulatory switch in HIV replication. Proceedings of the National Academy of Sciences of the United States of America. 99: 7928-33. PMID 12048247 DOI: 10.1073/pnas.122119999  0.96
2002 Richter S, Cao H, Rana TM. Specific HIV-1 TAR RNA loop sequence and functional groups are required for human cyclin T1-Tat-TAR ternary complex formation. Biochemistry. 41: 6391-7. PMID 12009901 DOI: 10.1021/bi0159579  0.96
2002 Dinman JD, Richter S, Plant EP, Taylor RC, Hammell AB, Rana TM. The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure. Proceedings of the National Academy of Sciences of the United States of America. 99: 5331-6. PMID 11959986 DOI: 10.1073/pnas.082102199  0.96
2001 Wang Z, Shah K, Rana TM. Probing Tat peptide-TAR RNA interactions by psoralen photo-cross-linking Biochemistry. 40: 6458-6464. PMID 11371209 DOI: 10.1021/bi0028744  0.96
2001 Tamilarasu N, Zhang J, Hwang S, Rana TM. A new strategy for site-specific protein modification: Analysis of a TAT peptide-tar RNA interaction Bioconjugate Chemistry. 12: 135-138. PMID 11312672 DOI: 10.1021/bc000104z  0.96
2001 Chiu YL, Coronel E, Ho CK, Shuman S, Rana TM. HIV-1 Tat Protein Interacts with Mammalian Capping Enzyme and Stimulates Capping of TAR RNA Journal of Biological Chemistry. 276: 12959-12966. PMID 11278368 DOI: 10.1074/jbc.M007901200  0.96
2001 Tamilarasu N, Huq I, Rana TM. Targeting RNA with peptidomimetic oligomers in human cells Bioorganic and Medicinal Chemistry Letters. 11: 505-507. PMID 11229758 DOI: 10.1016/S0960-894X(00)00709-5  0.96
2001 Ping YH, Rana TM. DSIF and NELF interact with RNA polymerase II elongation complex and HIV-1 Tat stimulates P-TEFb-mediated phosphorylation of RNA polymerase II and DSIF during transcription elongation. The Journal of Biological Chemistry. 276: 12951-8. PMID 11112772 DOI: 10.1074/jbc.M006130200  0.96
2000 Hwang S, Tamilarasu N, Rana TM. Selection of HIV replication inhibitors: Chemistry and biology Advances in Pharmacology. 49: 167-197. PMID 11013764  0.96
2000 Zhang J, Tamilarasu N, Hwang S, Garber ME, Huq I, Jones KA, Rana TM. HIV-1 TAR RNA enhances the interaction between Tat and cyclin T1. The Journal of Biological Chemistry. 275: 34314-9. PMID 10944537 DOI: 10.1074/jbc.M006804200  0.96
2000 Tamilarasu N, Huq I, Rana TM. Design, synthesis, and biological activity of a cyclic peptide: An inhibitor of HIV-1 Tat-TAR interactions in human cells Bioorganic and Medicinal Chemistry Letters. 10: 971-974. PMID 10853671 DOI: 10.1016/S0960-894X(00)00140-2  0.96
1999 Hwang S, Tamilarasu N, Ryan K, Huq I, Richter S, Still WC, Rana TM. Inhibition of gene expression in human cells through small molecule-RNA interactions. Proceedings of the National Academy of Sciences of the United States of America. 96: 12997-3002. PMID 10557261 DOI: 10.1073/pnas.96.23.12997  0.96
1999 Wang Z, Rana TM. Probing RNA-protein interactions by psoralen photocrosslinking Methods in Molecular Biology (Clifton, N.J.). 118: 49-62. PMID 10549514  0.96
1999 Wang Z, Huq I, Rana TM. Proximity of a Tat peptide to the HIV-1 TAR RNA loop region determined by site-specific photo-cross-linking Bioconjugate Chemistry. 10: 512-519. PMID 10346885 DOI: 10.1021/bc980145j  0.96
1999 Rana TM, Jeang KT. Biochemical and functional interactions between HIV-1 Tat protein and TAR RNA Archives of Biochemistry and Biophysics. 365: 175-185. PMID 10328810 DOI: 10.1006/abbi.1999.1206  0.96
1999 Huq I, Ping YH, Tamilarasu N, Rana TM. Controlling human immunodeficiency virus type 1 gene expression by unnatural peptides. Biochemistry. 38: 5172-7. PMID 10213623 DOI: 10.1021/bi982638h  0.96
1999 Ping YH, Rana TM. Tat-associated kinase (P-TEFb): a component of transcription preinitiation and elongation complexes. The Journal of Biological Chemistry. 274: 7399-404. PMID 10066804 DOI: 10.1074/jbc.274.11.7399  0.96
1999 Huq I, Tamilarasu N, Rana TM. Visualizing tertiary folding of RNA and RNA-protein interactions by a tethered iron chelate: Analysis of HIV-1 Tat-TAR complex Nucleic Acids Research. 27: 1084-1093. PMID 9927743 DOI: 10.1093/nar/27.4.1084  0.96
1999 Tamilarasu N, Huq I, Rana TM. High affinity and specific binding of HIV-1 TAR RNA by a tat-derived oligourea [1] Journal of the American Chemical Society. 121: 1597-1598. DOI: 10.1021/ja983822t  0.96
1997 Huq I, Rana TM. Probing the proximity of the core domain of an HIV-1 Tat fragment in a Tat-TAR complex by affinity cleaving Biochemistry. 36: 12592-12599. PMID 9376365 DOI: 10.1021/bi971011g  0.96
1997 Huq I, Wang X, Rana TM. Specific recognition of HIV-1 TAR RNA by a D-Tat peptide Nature Structural Biology. 4: 881-882. PMID 9360598 DOI: 10.1038/nsb1197-881  0.96
1997 Ping YH, Liu Y, Wang X, Neenhold HR, Rana TM. Dynamics of RNA-protein interactions in the HIV-1 Rev-RRE complex visualized by 6-thioguanosine-mediated photocrosslinking. Rna (New York, N.Y.). 3: 850-60. PMID 9257644  0.96
1997 Wang Z, Rana TM. DNA damage-dependent transcriptional arrest and termination of RNA polymerase II elongation complexes in DNA template containing HIV-1 promoter Proceedings of the National Academy of Sciences of the United States of America. 94: 6688-6693. PMID 9192626 DOI: 10.1073/pnas.94.13.6688  0.96
1997 Song AI, Rana TM. Synthesis of an amino acid analogue to incorporate p-aminobenzyl-EDTA in peptides Bioconjugate Chemistry. 8: 249-252. PMID 9095368 DOI: 10.1021/bc960084u  0.96
1996 Shah K, Neenhold H, Wang Z, Rana TM. Incorporation of an artificial protease and nuclease at the HIV-1 tat binding site of trans-activation responsive RNA Bioconjugate Chemistry. 7: X1-289. PMID 8816949  0.96
1996 Wang Z, Wang X, Rana TM. Protein orientation in the Tat-TAR complex determined by psoralen photocross-linking Journal of Biological Chemistry. 271: 16995-16998. PMID 8663586 DOI: 10.1074/jbc.271.29.16995  0.96
1996 Wang Z, Rana TM. RNA conformation in the Tat-TAR complex determined by site-specific photo-cross-linking Biochemistry. 35: 6491-6499. PMID 8639596  0.96
1996 Liu Y, Wang Z, Rana TM. Visualizing a specific contact in the HIV-1 Tat protein fragment and trans-activation responsive region RNA complex by photocross-linking Journal of Biological Chemistry. 271: 10391-10396. PMID 8626612 DOI: 10.1074/jbc.271.17.10391  0.96
1996 Shah K, Rana TM. Synthesis of N-α-Fmoc-N-ε-tetrabutyl ester-EDTA-L-Lysine: An amino acid analog to prepare affinity cleaving peptides Synthetic Communications. 26: 2695-2702.  0.96
1995 Rana TM. Major groove opening at the HIV-1 tat binding site of TAR RNA evidenced by a rhodium probe Biochemistry®. 34: 6303-6309. PMID 7756257  0.96
1995 Wang Z, Rana TM. Chemical conversion of a trans-activation responsive RNA-binding fragment of HIV-1 Tat protein into a site-specific cross-linking agent Journal of the American Chemical Society. 117: 5438-5444. DOI: 10.1021/ja00125a002  0.96
1994 Rana TM. Artificial proteolysis by a metal chelate: methodology and mechanism Advances in Inorganic Biochemistry. 10: 177-200. PMID 8203288  0.96
1994 Shah K, Wu H, Rana TM. Synthesis of uridine phosphoramidite analogs: Reagents for site-specific incorporation of photoreactive sites into RNA sequences Bioconjugate Chemistry. 5: 508-512. PMID 7533002  0.96
1994 Selvin PR, Rana TM, Hearst JE. Luminescence resonance energy transfer Journal of the American Chemical Society. 116: 6029-6030.  0.96
1992 Rana TM, Ban M, Hearst JE. Synthesis of a metal-ligating amino acid suitable for solid phase assembly of peptides Tetrahedron Letters. 33: 4521-4524. DOI: 10.1016/S0040-4039(00)61302-3  0.96
1991 Rana TM, Meares CF. Transfer of oxygen from an artificial protease to peptide carbon during proteolysis. Proceedings of the National Academy of Sciences of the United States of America. 88: 10578-82. PMID 1961724  0.96
1991 Rana TM, Meares CF. Iron chelate mediated proteolysis: Protein structure dependence Journal of the American Chemical Society. 113: 1859-1861.  0.96
1990 Rana TM, Meares CF. N-terminal modification of immunoglobulin polypeptide chains tagged with isothiocyanato chelates. Bioconjugate Chemistry. 1: 357-62. PMID 2129106  0.96
1990 Rana TM, Meares CF. Specific cleavage of a protein by an attached iron chelate Journal of the American Chemical Society. 112: 2457-2458.  0.96
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