Hilary E. Wade, Ph.D. - Related publications

Affiliations: 
2009 Molecular Cancer Biology Duke University, Durham, NC 
Area:
Molecular Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Huang CF, Lingadahalli S, Morova T, Ozturan D, Hu E, Yu IPL, Linder S, Hoogstraat M, Stelloo S, Sar F, van der Poel H, Altintas UB, Saffarzadeh M, Le Bihan S, McConeghy B, et al. Functional mapping of androgen receptor enhancer activity. Genome Biology. 22: 149. PMID 33975627 DOI: 10.1186/s13059-021-02339-6   
2021 Zhou M, Xu Q, Huang D, Luo L. Regulation of gene transcription of B lymphoma Mo-MLV insertion region 1 homolog (Review). Biomedical Reports. 14: 52. PMID 33884195 DOI: 10.3892/br.2021.1428   
2021 Górska AM, Gouveia P, Borba AR, Zimmermann A, Serra TS, Carvalho P, Lourenço TF, Oliveira MM, Peterhänsel C, Saibo NJM. ZmOrphan94 Transcription Factor Downregulates Gene Expression in Maize Bundle Sheath Cells. Frontiers in Plant Science. 12: 559967. PMID 33897718 DOI: 10.3389/fpls.2021.559967   
2021 Cao R, Liu S, Zhang J, Ren X, Chen X, Cheng B, Xia J. Integrative Analysis of TP53INP2 in Head and Neck Squamous Cell Carcinoma. Frontiers in Genetics. 12: 630794. PMID 33897760 DOI: 10.3389/fgene.2021.630794   
2021 Rashid M, Shah SG, Verma T, Chaudhary N, Sukanya, Patel VB, Gera PB, Smoot D, Ashaktorab H, Dalal SN, Gupta S. Tumor-specific overexpression of histone gene, H3C14 in gastric cancer is mediated through EGFR-FOXC1 axis. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194703. PMID 33727172 DOI: 10.1016/j.bbagrm.2021.194703   
2021 Shen HF, Zhang WJ, Huang Y, He YH, Hu GS, Wang L, Peng BL, Yi J, Li TT, Rong R, Chen XY, Liu JY, Li WJ, Ohgi K, Li SW, et al. The Dual Function of KDM5C in Both Gene Transcriptional Activation and Repression Promotes Breast Cancer Cell Growth and Tumorigenesis. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 8: 2004635. PMID 33977073 DOI: 10.1002/advs.202004635   
2021 Kim SM, Rampogu S, Vetrivel P, Kulkarni AM, Ha SE, Kim HH, Lee KW, Kim GS. Transcriptome analysis of sinensetin-treated liver cancer cells guided by biological network analysis. Oncology Letters. 21: 355. PMID 33747212 DOI: 10.3892/ol.2021.12616   
2021 Li S, Wen Z, Ghalandari B, Zhou T, Warden AR, Zhang T, Dai P, Yu Y, Guo W, Liu M, Xie H, Ding X. Single-Cell Immunoblotting based on a Photoclick Hydrogel Enables High-Throughput Screening and Accurate Profiling of Exogenous Gene Expression. Advanced Materials (Deerfield Beach, Fla.). e2101108. PMID 33899289 DOI: 10.1002/adma.202101108   
2021 Champion M, Chiquet J, Neuvial P, Elati M, Radvanyi F, Birmelé E. Identification of deregulation mechanisms specific to cancer subtypes. Journal of Bioinformatics and Computational Biology. 19: 2140003. PMID 33653235 DOI: 10.1142/S0219720021400035   
2021 Greco FV, Pandi A, Erb TJ, Grierson CS, Gorochowski TE. Harnessing the central dogma for stringent multi-level control of gene expression. Nature Communications. 12: 1738. PMID 33741937 DOI: 10.1038/s41467-021-21995-7   
2021 Odle AK, MacNicol MC, Childs GV, MacNicol AM. Post-Transcriptional Regulation of : A Checkpoint for Metabolic Control of Female Reproduction. International Journal of Molecular Sciences. 22. PMID 33805020 DOI: 10.3390/ijms22073312   
2021 Panigrahi A, O'Malley BW. Mechanisms of enhancer action: the known and the unknown. Genome Biology. 22: 108. PMID 33858480 DOI: 10.1186/s13059-021-02322-1   
2021 Cavalli M, Diamanti K, Pan G, Dabrowski MJ, Komorowski J, Wadelius C. A non-coding cancer mutation disrupting an HNF4α binding motif affects an enhancer regulating genes associated to the progression of liver cancer. Experimental Oncology. 43: 2-6. PMID 33785712 DOI: 10.32471/exp-oncology.2312-8852.vol-43-no-1.15925   
2021 Kitajima K, Kawahira N, Lee S, Tamura K, Morishita Y, Ohtsuka D. Light-induced local gene expression in primary chick cell culture system. Development, Growth & Differentiation. PMID 33733477 DOI: 10.1111/dgd.12721   
2021 Roy S, Huang B, Sinha N, Wang J, Sen A. Androgens regulate ovarian gene expression by balancing Ezh2-Jmjd3 mediated H3K27me3 dynamics. Plos Genetics. 17: e1009483. PMID 33784295 DOI: 10.1371/journal.pgen.1009483   
2021 Roy S, Huang B, Sinha N, Wang J, Sen A. Androgens regulate ovarian gene expression by balancing Ezh2-Jmjd3 mediated H3K27me3 dynamics. Plos Genetics. 17: e1009483. PMID 33784295 DOI: 10.1371/journal.pgen.1009483   
2021 Patel YD, Brown AJ, Zhu J, Rosignoli G, Gibson SJ, Hatton D, James DC. Control of Multigene Expression Stoichiometry in Mammalian Cells Using Synthetic Promoters. Acs Synthetic Biology. PMID 33939428 DOI: 10.1021/acssynbio.0c00643   
2021 Choi J, Lysakovskaia K, Stik G, Demel C, Söding J, Tian TV, Graf T, Cramer P. Evidence for additive and synergistic action of mammalian enhancers during cell fate determination. Elife. 10. PMID 33770473 DOI: 10.7554/eLife.65381   
2021 He K, Zhang J, Liu J, Cui Y, Liu LG, Ye S, Ban Q, Pan R, Liu D. Functional genomics study of protein inhibitor of activated STAT1 in mouse hippocampal neuronal cells revealed by RNA sequencing. Aging. 13. PMID 33759814 DOI: 10.18632/aging.202749   
2021 Miao Z, Balzer MS, Ma Z, Liu H, Wu J, Shrestha R, Aranyi T, Kwan A, Kondo A, Pontoglio M, Kim J, Li M, Kaestner KH, Susztak K. Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets. Nature Communications. 12: 2277. PMID 33859189 DOI: 10.1038/s41467-021-22266-1   
2021 Rodríguez-Gómez G, Paredes-Villa A, Cervantes-Badillo MG, Gómez-Sonora JP, Jorge-Pérez JH, Cervantes-Roldán R, León-Del-Río A. Tristetraprolin: A cytosolic regulator of mRNA turnover moonlighting as transcriptional corepressor of gene expression. Molecular Genetics and Metabolism. PMID 33795191 DOI: 10.1016/j.ymgme.2021.03.015   
2021 Aladdin A, Sahly N, Faty R, Youssef MM, Salem TZ. The baculovirus promoter OpIE2 sequence has inhibitory effect on the activity of the cytomegalovirus (CMV) promoter in HeLa and HEK-293 T cells. Gene. 781: 145541. PMID 33667607 DOI: 10.1016/j.gene.2021.145541   
2021 Raut S, Kumar AV, Deshpande S, Khambata K, Balasinor NH. Sex hormones regulate lipid metabolism in adult Sertoli cells: a genome-wide study of estrogen and androgen receptor binding sites. The Journal of Steroid Biochemistry and Molecular Biology. 105898. PMID 33845154 DOI: 10.1016/j.jsbmb.2021.105898   
2021 Mark KG, Rape M. Ubiquitin-dependent regulation of transcription in development and disease. Embo Reports. e51078. PMID 33779035 DOI: 10.15252/embr.202051078   
2021 Bacher S, Meier-Soelch J, Kracht M, Schmitz ML. Regulation of Transcription Factor NF-κB in Its Natural Habitat: The Nucleus. Cells. 10. PMID 33805563 DOI: 10.3390/cells10040753   
2021 Kwik M, Hainzl S, Oppelt J, Tichy B, Koller U, Bernardinelli E, Steiner M, Zara G, Nofziger C, Weis S, Paulmichl M, Dossena S, Patsch W, Soyal SM. Selective Activation of CNS and Reference Promoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases. International Journal of Molecular Sciences. 22. PMID 33804860 DOI: 10.3390/ijms22073296   
2021 Galbraith MD, Andrysik Z, Sullivan KD, Espinosa JM. Global Analyses to Identify Direct Transcriptional Targets of p53. Methods in Molecular Biology (Clifton, N.J.). 2267: 19-56. PMID 33786783 DOI: 10.1007/978-1-0716-1217-0_3   
2021 Li WF, Kang Y, Zhang Y, Zang QL, Qi LW. Concerted control of the LaRAV1-LaCDKB1;3 module by temperature during dormancy release and reactivation of larch. Tree Physiology. PMID 33847364 DOI: 10.1093/treephys/tpab052   
2021 Kim D, Hong SH, Han G, Cho C. Analysis of mouse male germ cell-specific or -predominant Tex13 family genes encoding proteins with transcriptional repressor activity. Molecular Biology Reports. PMID 33811575 DOI: 10.1007/s11033-021-06265-5   
2021 Bhatia S, Kumar H, Mahajan M, Yadav S, Saini P, Yadav S, Sahu SK, Sundaram JK, Yadav RK. A cellular expression map of epidermal and subepidermal cell layer-enriched transcription factor genes integrated with the regulatory network in Arabidopsis shoot apical meristem. Plant Direct. 5: e00306. PMID 33748654 DOI: 10.1002/pld3.306   
2021 Shen J, Zhang H, Lu C, Gu J, Zhang Y, Hu J. Microarray analysis of the time-dependent expression profiles of long non-coding RNAs in the progression of vein graft stenotic disease. Experimental and Therapeutic Medicine. 21: 635. PMID 33968166 DOI: 10.3892/etm.2021.10067   
2021 Fan K, Moore JE, Zhang XO, Weng Z. Genetic and epigenetic features of promoters with ubiquitous chromatin accessibility support ubiquitous transcription of cell-essential genes. Nucleic Acids Research. PMID 33978759 DOI: 10.1093/nar/gkab345   
2021 Zhu I, Song W, Ovcharenko I, Landsman D. A model of active transcription hubs that unifies the roles of active promoters and enhancers. Nucleic Acids Research. PMID 33872375 DOI: 10.1093/nar/gkab235   
2021 Liu Z, Wang Y, Yuan S, Wen F, Liu J, Zou L, Zhang J. Regulatory role of long non-coding RNA UCA1 in signaling pathways and its clinical applications. Oncology Letters. 21: 404. PMID 33777227 DOI: 10.3892/ol.2021.12665   
2021 Haellman V, Saxena P, Jiang Y, Fussenegger M. Rational design and optimization of synthetic gene switches for controlling cell-fate decisions in pluripotent stem cells. Metabolic Engineering. 65: 99-110. PMID 33744461 DOI: 10.1016/j.ymben.2021.03.009   
2021 Wu B, Jiang X, Huang Y, Ying X, Zhang H, Liu B, Li Z, Qi D, Ji W, Cai X. Integrated Analysis of mRNA-mA-protein Profiles Reveals Novel Insights into the Mechanisms for Cadmium-induced Urothelial Transformation. Biomarkers : Biochemical Indicators of Exposure, Response, and Susceptibility to Chemicals. 1-23. PMID 33830842 DOI: 10.1080/1354750X.2021.1913513   
2021 Tresenrider A, Morse K, Jorgensen V, Chia M, Liao H, Jacobus van Werven F, Ünal E. Integrated genomic analysis reveals key features of long undecoded transcript isoform-based gene repression. Molecular Cell. PMID 33826921 DOI: 10.1016/j.molcel.2021.03.013   
2021 Yang Z, Gao Z, Zhou H, He Y, Liu Y, Lai Y, Zheng J, Li X, Liao H. GmPTF1 modifies root architecture responses to phosphate starvation primarily through regulating GmEXPB2 expression in soybean. The Plant Journal : For Cell and Molecular Biology. PMID 33960526 DOI: 10.1111/tpj.15307   
2021 Purayil HT, Zhang Y, Black JB, Gharaibeh R, Daaka Y. Nuclear βArrestin1 regulates androgen receptor function in castration resistant prostate cancer. Oncogene. PMID 33692468 DOI: 10.1038/s41388-021-01730-8   
2021 Awadasseid A, Ma X, Wu Y, Zhang W. G-quadruplex stabilization via small-molecules as a potential anti-cancer strategy. Biomedicine & Pharmacotherapy = Biomedecine & Pharmacotherapie. 139: 111550. PMID 33831835 DOI: 10.1016/j.biopha.2021.111550   
2021 Reed F, Larsuel ST, Mayday MY, Scanlon V, Krause DS. MRTFA: a critical protein in normal and malignant hematopoiesis and beyond. The Journal of Biological Chemistry. 100543. PMID 33722605 DOI: 10.1016/j.jbc.2021.100543   
2021 Qin J, Guo L, Ye F, Kang S, Sun D, Zhu L, Bai Y, Cheng Z, Xu L, Ouyang C, Xiao L, Wang S, Wu Q, Zhou X, Crickmore N, et al. MAPK-activated transcription factor PxJun suppresses expression and confers resistance to Cry1Ac toxin in (L.). Applied and Environmental Microbiology. PMID 33893113 DOI: 10.1128/AEM.00466-21   
2021 Lin M, Xu M, Xu Z, Weng Z, Lin B, Lan Y, Liu Q, Lin X, Pan J. LINC00200 contributes to the chemoresistance to oxaliplatin of gastric cancer cells via regulating E2F1/RAD51 axis. Human Cell. PMID 33822325 DOI: 10.1007/s13577-021-00523-1   
2021 Wurihan W, Weber AM, Gong Z, Lou Z, Sun S, Zhou J, Fan H. GrgA overexpression inhibits Chlamydia trachomatis growth through sigma-and sigma-dependent mechanisms. Microbial Pathogenesis. 104917. PMID 33940135 DOI: 10.1016/j.micpath.2021.104917   
2021 Wang B, Wang W, Wang H, Liu W. Microarray Analysis of Novel Genes Involved in Nasopharyngeal Carcinoma. Bulletin of Experimental Biology and Medicine. PMID 33788105 DOI: 10.1007/s10517-021-05127-1   
2021 Li C, Lyu Y, Liu C, Yin S. The Role of PBK as a Potential Prognostic and Diagnostic Biomarker in Ovarian Cancer. Cancer Biotherapy & Radiopharmaceuticals. PMID 33794097 DOI: 10.1089/cbr.2020.4249   
2021 Yi P, Xu X, Yao J, Qiu B. Analysis of mRNA Expression and DNA Methylation Datasets According to the Genomic Distribution of CpG Sites in Osteoarthritis. Frontiers in Genetics. 12: 618803. PMID 33936160 DOI: 10.3389/fgene.2021.618803   
2021 Lee J, Stone J, Desai P, Kosowicz JG, Liu JO, Ambinder RF. Arsenicals, the Integrated Stress Response, and Epstein-Barr Virus Lytic Gene Expression. Viruses. 13. PMID 33946406 DOI: 10.3390/v13050812   
2021 Zhang B, Chen Z, Wang Y, Fan G, He X. Integrated bioinformatics analysis for the identification of key genes and signaling pathways in thyroid carcinoma. Experimental and Therapeutic Medicine. 21: 298. PMID 33717241 DOI: 10.3892/etm.2021.9729   
2021 Goszczynski DE, Halstead MM, Islas-Trejo AD, Zhou H, Ross PJ. Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage. Genome Research. 31: 732-744. PMID 33722934 DOI: 10.1101/gr.267336.120