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Jos Oomens - Publications

Affiliations: 
University of Amsterdam, Amsterdam, Netherlands 
Area:
Action Spectroscopy
Website:
http://www.english.uva.nl/news/professorappointments.cfm/E2E4D21C-1321-B0BE-A4A016A719484A2C

421 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Kamer J, Schleier D, Jiao A, Schneider G, Martens J, Berden G, Oomens J, Bouwman J. IR spectra of cationic 1,5,9-triazacoronene and two of its cationic derivatives. Physical Chemistry Chemical Physics : Pccp. PMID 39495341 DOI: 10.1039/d4cp03004d  0.36
2024 Walker SK, Stevenson BC, Perez EH, Jones RM, Loertscher DH, Bubas AR, Yang F, Fenn TA, Berden G, Martens J, Oomens J, Armentrout PB. Structure Determination of Zinc and Cadmium Dication Complexes with Intact and Deprotonated Histidyl Glycine and Glycyl Histidine Dipeptides. The Journal of Physical Chemistry. B. 128: 11134-11143. PMID 39482868 DOI: 10.1021/acs.jpcb.4c06308  0.367
2024 Armentrout PB, Boles GC, Berden G, Oomens J. Rearrangement of Proline Complexes with Zn: An Infrared Multiple Photon Dissociation and Theoretical Investigation. Journal of the American Society For Mass Spectrometry. 35: 2529-2543. PMID 39259826 DOI: 10.1021/jasms.4c00321  0.324
2024 Ter Braak F, Houthuijs K, Elferink H, Kromm A, van Wieringen T, Berden G, Martens J, Oomens J, Boltje TJ. Investigation of Neighboring Group Participation in 3,4-Diacetylated Glycosyl Donors in the Gas Phase. Chemistry (Weinheim An Der Bergstrasse, Germany). e202402584. PMID 39222485 DOI: 10.1002/chem.202402584  0.301
2024 Li Y, Lau JK, van Wieringen T, Martens J, Berden G, Oomens J, Hopkinson AC, Siu KWM, Chu IK. Structure and fragmentation chemistry of the peptide radical cations of glycylphenylalanylglycine (GFG). Plos One. 19: e0308164. PMID 39137228 DOI: 10.1371/journal.pone.0308164  0.37
2024 Schleier D, Kamer J, Martens J, Berden G, Oomens J, Bouwman J. Exploring the scaling factors for infrared modes of PANHs - A case study on cationic 3-Azafluoranthene.+ and protonated 3-Azafluoranthene. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. e202300915. PMID 38758018 DOI: 10.1002/cphc.202300915  0.331
2024 Moons PH, Ter Braak F, de Kleijne FFJ, Bijleveld B, Corver SJR, Houthuijs KJ, Almizori HR, Berden G, Martens J, Oomens J, White PB, Boltje TJ. Characterization of elusive rhamnosyl dioxanium ions and their application in complex oligosaccharide synthesis. Nature Communications. 15: 2257. PMID 38480691 DOI: 10.1038/s41467-024-46522-2  0.354
2023 Munshi MU, Berden G, Oomens J. Infrared Ion Spectroscopic Characterization of the Gaseous [Co(15-crown-5)(HO)] Complex. The Journal of Physical Chemistry. A. 127: 7256-7263. PMID 37595154 DOI: 10.1021/acs.jpca.3c04241  0.44
2023 van Outersterp RE, Kooijman PC, Merx J, Engelke UFH, Omidikia N, Tonneijck MH, Houthuijs KJ, Berden G, Peters TMA, Lefeber DJ, Willemsen MAAP, Mecinovic J, Jansen JJ, Coene KLM, Wevers RA, ... ... Oomens J, et al. Distinguishing Oligosaccharide Isomers Using Far-Infrared Ion Spectroscopy: Identification of Biomarkers for Inborn Errors of Metabolism. Analytical Chemistry. 95: 9787-9796. PMID 37341384 DOI: 10.1021/acs.analchem.3c00363  0.314
2023 Houthuijs KJ, Berden G, Engelke UFH, Gautam V, Wishart DS, Wevers RA, Martens J, Oomens J. An Infrared Spectral Library of Molecular Ions for Metabolite Identification. Analytical Chemistry. PMID 37262385 DOI: 10.1021/acs.analchem.3c01078  0.354
2023 Paul M, Thomulka T, Harnying W, Neudörfl JM, Adams CR, Martens J, Berden G, Oomens J, Meijer AJHM, Berkessel A, Schäfer M. Hydrogen Bonding Shuts Down Tunneling in Hydroxycarbenes: A Gas-Phase Study by Tandem-Mass Spectrometry, Infrared Ion Spectroscopy, and Theory. Journal of the American Chemical Society. PMID 37235775 DOI: 10.1021/jacs.3c01698  0.329
2023 Stevenson BC, Berden G, Martens J, Oomens J, Armentrout PB. Spectroscopic Investigation of the Metal Coordination of the Aromatic Amino Acids with Zinc and Cadmium. The Journal of Physical Chemistry. A. 127: 3560-3569. PMID 37053556 DOI: 10.1021/acs.jpca.2c08940  0.332
2023 Kotobi A, Schwob L, Vonbun-Feldbauer GB, Rossi M, Gasparotto P, Feiler C, Berden G, Oomens J, Oostenrijk B, Scuderi D, Bari S, Meißner RH. Reconstructing the infrared spectrum of a peptide from representative conformers of the full canonical ensemble. Communications Chemistry. 6: 46. PMID 36869192 DOI: 10.1038/s42004-023-00835-3  0.307
2023 Corinti D, Rotari L, Crestoni ME, Fornarini S, Oomens J, Berden G, Tintaru A, Chiavarino B. Protonated Forms of Naringenin and Naringenin Chalcone: Proteiform Bioactive Species Elucidated by IRMPD Spectroscopy, IMS, CID-MS, and Computational Approaches. Journal of Agricultural and Food Chemistry. 71: 4005-4015. PMID 36849438 DOI: 10.1021/acs.jafc.2c07453  0.385
2023 Martínez-Haya B, Avilés-Moreno JR, Gámez F, Martens J, Oomens J, Berden G. A Dynamic Proton Bond: MH·HO ⇌ M·HO Interconversion in Loosely Coordinated Environments. The Journal of Physical Chemistry Letters. 14: 1294-1300. PMID 36723385 DOI: 10.1021/acs.jpclett.2c03832  0.329
2022 Munshi MU, Berden G, Oomens J. Facial meridional coordination in gaseous Ni(II)-hexacyclen complexes revealed with infrared ion spectroscopy. Physical Chemistry Chemical Physics : Pccp. 24: 26890-26897. PMID 36317665 DOI: 10.1039/d2cp03871d  0.434
2022 Vink MJA, van Geenen FAMG, Berden G, O'Riordan TJC, Howe PWA, Oomens J, Perry SJ, Martens J. Structural Elucidation of Agrochemicals and Related Derivatives Using Infrared Ion Spectroscopy. Environmental Science & Technology. PMID 36214158 DOI: 10.1021/acs.est.2c03210  0.323
2022 Armentrout PB, Stevenson BC, Ghiassee M, Boles GC, Berden G, Oomens J. Infrared multiple-photon dissociation spectroscopy of cationized glycine: effects of alkali metal cation size on gas-phase conformation. Physical Chemistry Chemical Physics : Pccp. 24: 22950-22959. PMID 36125205 DOI: 10.1039/d2cp03469g  0.343
2022 Braak FT, Elferink H, Houthuijs KJ, Oomens J, Martens J, Boltje TJ. Characterization of Elusive Reaction Intermediates Using Infrared Ion Spectroscopy: Application to the Experimental Characterization of Glycosyl Cations. Accounts of Chemical Research. 55: 1669-1679. PMID 35616920 DOI: 10.1021/acs.accounts.2c00040  0.351
2022 Palotás J, Martens J, Berden G, Oomens J. Laboratory IR Spectra of the Ionic Oxidized Fullerenes CO and COH. The Journal of Physical Chemistry. A. PMID 35533303 DOI: 10.1021/acs.jpca.2c01329  0.392
2022 Zeh D, Bast M, Martens J, Berden G, Oomens J, Brünken S, Schlemmer S, Schäfer M, Kuck D. Unidirectional Double- and Triple-Hydrogen Rearrangement Reactions Probed by Infrared Ion Spectroscopy. Journal of the American Society For Mass Spectrometry. PMID 35471836 DOI: 10.1021/jasms.2c00039  0.356
2021 Merx J, Houthuijs KJ, Elferink H, Witlox E, Mecinović J, Oomens J, Martens J, Boltje TJ, Rutjes FPJT. Characterization of Cyclic N-Acyliminium Ions by Infrared Ion Spectroscopy. Chemistry (Weinheim An Der Bergstrasse, Germany). e202104078. PMID 34911145 DOI: 10.1002/chem.202104078  0.382
2021 McNary CP, Demireva M, Martens J, Berden G, Oomens J, Hamlow LA, Rodgers MT, Armentrout PB. Infrared multiple photon dissociation action spectroscopy of protonated unsymmetrical dimethylhydrazine and proton-bound dimers of hydrazine and unsymmetrical dimethylhydrazine. Physical Chemistry Chemical Physics : Pccp. 23: 25877-25885. PMID 34766618 DOI: 10.1039/d1cp03781a  0.341
2021 Andersson Å, Poline M, Houthuijs KJ, van Outersterp RE, Berden G, Oomens J, Zhaunerchyk V. IRMPD Spectroscopy of Homo- and Heterochiral Asparagine Proton-Bound Dimers in the Gas Phase. The Journal of Physical Chemistry. A. 125: 7449-7456. PMID 34428065 DOI: 10.1021/acs.jpca.1c05667  0.408
2021 Armentrout PB, Boles GC, Ghiassee M, Berden G, Oomens J. Infrared Multiple-Photon Dissociation Spectra of Sodiated Complexes of the Aliphatic Amino Acids. The Journal of Physical Chemistry. A. PMID 34270243 DOI: 10.1021/acs.jpca.1c04708  0.334
2021 Armentrout PB, Boles GC, Ghiassee M, Berden G, Oomens J. Infrared Multiple-Photon Dissociation Spectra of Sodiated Complexes of the Aliphatic Amino Acids. The Journal of Physical Chemistry. A. PMID 34270243 DOI: 10.1021/acs.jpca.1c04708  0.334
2021 Lau JK, Esuon F, Berden G, Oomens J, Hopkinson AC, Ryzhov V, Siu KWM. Generation, Characterization, and Dissociation of Radical Cations Derived from Prolyl-glycyl-glycine. The Journal of Physical Chemistry. B. PMID 34097420 DOI: 10.1021/acs.jpcb.1c01732  0.366
2021 Wiersma SD, Candian A, Bakker JM, Berden G, Eyler JR, Oomens J, Tielens AGGM, Petrignani A. IR photofragmentation of the phenyl cation: spectroscopy and fragmentation pathways. Physical Chemistry Chemical Physics : Pccp. PMID 33587740 DOI: 10.1039/d0cp05554a  0.378
2021 Boles GC, Kempkes LJM, Martens J, Berden G, Oomens J, Armentrout PB. Influence of a Hydroxyl Group on the Deamidation and Dehydration Reactions of Protonated Asparagine-Serine Investigated by Combined Spectroscopic, Guided Ion Beam, and Theoretical Approaches. Journal of the American Society For Mass Spectrometry. PMID 33570934 DOI: 10.1021/jasms.0c00468  0.312
2021 Hanozin E, Mignolet B, Martens J, Berden G, Sluysmans D, Duwez AS, Stoddart JF, Eppe G, Oomens J, De Pauw E, Morsa D. Radical-Pairing Interactions in a Molecular Switch Evidenced by Ion Mobility Spectrometry and Infrared Ion Spectroscopy. Angewandte Chemie (International Ed. in English). PMID 33561311 DOI: 10.1002/anie.202014728  0.356
2020 Stevenson BC, Martens J, Berden G, Oomens J, Schäfer M, Armentrout PB. IRMPD Spectroscopic and Theoretical Structural Investigations of Zinc and Cadmium Dications Bound to Histidine Dimers. The Journal of Physical Chemistry. A. PMID 33241937 DOI: 10.1021/acs.jpca.0c08861  0.328
2020 Tang WK, Mu X, Li M, Martens J, Berden G, Oomens J, Chu IK, Siu CK. Formation of n → π interaction facilitating dissociative electron transfer in isolated tyrosine-containing molecular peptide radical cations. Physical Chemistry Chemical Physics : Pccp. PMID 32940309 DOI: 10.1039/D0Cp00533A  0.381
2020 van Outersterp RE, Martens J, Berden G, Koppen V, Cuyckens F, Oomens J. Mass spectrometry-based identification of -, - and -isomers using infrared ion spectroscopy. The Analyst. 145: 6162-6170. PMID 32924040 DOI: 10.1039/D0An01119C  0.407
2020 Berkessel A, Paul M, Peckelsen K, Thomulka T, Martens J, Berden G, Oomens J, Neudörfl JM, Breugst M, Meijer AJHM, Schäfer M. Breslow Intermediates (Aminoenols) and their Keto Tautomers: First Gas-Phase Characterization by IR Ion Spectroscopy. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 32893891 DOI: 10.1002/Chem.202003454  0.454
2020 Eremin D, Boiko D, Kostyukovich A, Burykina J, Denisova E, Anania M, Martens J, Berden G, Oomens J, Roithová J, Ananikov VP. Mechanistic study of Pd/NHC-catalyzed Sonogashira reaction: discovery of NHC-ethynyl coupling process. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 32881095 DOI: 10.1002/Chem.202003533  0.325
2020 Oomens J, Kempkes LJM, Geurts TPJ, van Dijk L, Martens J, Berden G, Armentrout PB. Water loss from protonated XxxSer and XxxThr dipeptides gives oxazoline - not oxazolone - product ions. Journal of the American Society For Mass Spectrometry. PMID 32876444 DOI: 10.1021/Jasms.0C00239  0.446
2020 Avilés-Moreno JR, Gámez F, Berden G, Martens J, Oomens J, Martínez-Haya B. Multipodal coordination and mobility of molecular cations inside the macrocycle valinomycin. Physical Chemistry Chemical Physics : Pccp. PMID 32840521 DOI: 10.1039/D0Cp02996C  0.456
2020 Berenbeim JA, Wong NGK, Cockett MCR, Berden G, Oomens J, Rijs AM, Dessent CEH. Sodium cationization can disrupt the intramolecular hydrogen bond that mediates the sunscreen activity of oxybenzone. Physical Chemistry Chemical Physics : Pccp. PMID 32840272 DOI: 10.1039/D0Cp03152F  0.456
2020 Li Y, Li M, Spencer DM, Martens J, Berden G, Oomens J, Siu CK, Chu IK. Mechanistic examination of C -C tyrosyl bond cleavage: Spectroscopic investigation of the generation of α-glycyl radical cations from tyrosyl (glycyl/alanyl)tryptophan. Journal of Mass Spectrometry : Jms. e4630. PMID 32812311 DOI: 10.1002/Jms.4630  0.349
2020 Boles GC, Stevenson BC, Hightower RL, Berden G, Oomens J, Armentrout PB. Zinc and cadmium complexation of L-methionine: An infrared multiple photon dissociation spectroscopy and theoretical study. Journal of Mass Spectrometry : Jms. e4580. PMID 32677757 DOI: 10.1002/Jms.4580  0.428
2020 Houthuijs KJ, Martens J, Arranja AG, Berden G, Nijsen JFW, Oomens J. Characterization of holmium(iii)-acetylacetonate complexes derived from therapeutic microspheres by infrared ion spectroscopy. Physical Chemistry Chemical Physics : Pccp. PMID 32618970 DOI: 10.1039/D0Cp01890B  0.435
2020 Li Y, Li M, Spencer DM, Lau JK, Martens J, Berden G, Oomens J, Fang DC, Hopkinson AC, Siu KWM, Siu CK, Chu IK. Dissociative electron transfer of copper(ii) complexes of glycyl(glycyl/alanyl)tryptophan in vacuo: IRMPD action spectroscopy provides evidence of transition from zwitterionic to non-zwitterionic peptide structures. Physical Chemistry Chemical Physics : Pccp. PMID 32490449 DOI: 10.1039/D0Cp02296A  0.449
2020 Hansen T, Elferink H, van Hengst JMA, Houthuijs KJ, Remmerswaal WA, Kromm A, Berden G, van der Vorm S, Rijs AM, Overkleeft HS, Filippov DV, Rutjes FPJT, van der Marel GA, Martens J, Oomens J, et al. Characterization of glycosyl dioxolenium ions and their role in glycosylation reactions. Nature Communications. 11: 2664. PMID 32471982 DOI: 10.1038/S41467-020-16362-X  0.359
2020 Acharya B, Kaushalya WKDN, Martens J, Berden G, Oomens J, Patrick AL. A Combined Infrared Ion Spectroscopy and Computational Chemistry Study of Hydroxyproline Isomers. Journal of the American Society For Mass Spectrometry. PMID 32383378 DOI: 10.1021/Jasms.0C00061  0.452
2020 Kranenburg RF, van Geenen FAMG, Berden G, Oomens J, Martens J, van Asten AC. Mass-Spectrometry-Based Identification of Synthetic Drug Isomers Using Infrared Ion Spectroscopy. Analytical Chemistry. PMID 32286052 DOI: 10.1021/Acs.Analchem.0C00915  0.438
2020 Berenbeim JA, Wong NGK, Cockett MCR, Berden G, Oomens J, Rijs AM, Dessent CEH. Unravelling the Keto-Enol Tautomer Dependent Photochemistry and Degradation Pathways of the Protonated UVA Filter Avobenzone. The Journal of Physical Chemistry. A. PMID 32208697 DOI: 10.1021/Acs.Jpca.0C01295  0.51
2020 Munshi MU, Martens J, Berden G, Oomens J. Vibrational Spectra of the Ruthenium-Tris-Bipyridine Dication and Its Reduced Form in Vacuo. The Journal of Physical Chemistry. A. PMID 32119552 DOI: 10.1021/Acs.Jpca.0C00888  0.517
2020 Martens J, van Outersterp RE, Vreeken RJ, Cuyckens F, Coene KLM, Engelke UF, Kluijtmans LAJ, Wevers RA, Buydens LMC, Redlich B, Berden G, Oomens J. Infrared ion spectroscopy: New opportunities for small-molecule identification in mass spectrometry - A tutorial perspective. Analytica Chimica Acta. 1093: 1-15. PMID 31735202 DOI: 10.1016/J.Aca.2019.10.043  0.441
2020 Wiersma SD, Candian A, Bakker JM, Martens J, Berden G, Oomens J, Buma WJ, Petrignani A. Photolysis-induced scrambling of PAHs as a mechanism for deuterium storage Astronomy & Astrophysics. 635: A9. DOI: 10.1051/0004-6361/201936982  0.454
2020 Hamlow L, Nei Y, Wu R, Gao J, Steill J, Berden G, Oomens J, Rodgers M. Influence of the local environment on the intrinsic structures of gas-phase cytidine-5′-monophosphates International Journal of Mass Spectrometry. 447: 116234. DOI: 10.1016/J.Ijms.2019.116234  0.463
2020 Tyler Davidson J, Piacentino EL, Sasiene ZJ, Abiedalla Y, DeRuiter J, Clark CR, Berden G, Oomens J, Ryzhov V, Jackson GP. Identification of novel fragmentation pathways and fragment ion structures in the tandem mass spectra of protonated synthetic cathinones Forensic Chemistry. 19: 100245. DOI: 10.1016/J.Forc.2020.100245  0.424
2019 Boles GC, Hightower RL, Berden G, Oomens J, Armentrout PB. Zinc and Cadmium Complexation of L-Threonine: An Infrared Multiple Photon Dissociation Spectroscopy and Theoretical Study. The Journal of Physical Chemistry. B. PMID 31604374 DOI: 10.1021/Acs.Jpcb.9B08184  0.413
2019 Munshi MU, Martens J, Berden G, Oomens J. Proto-Isomerization of Indigo and Isoindigo Dyes Confirmed by Gas-Phase Infrared Ion Spectroscopy. The Journal of Physical Chemistry. A. PMID 31490692 DOI: 10.1021/Acs.Jpca.9B06858  0.46
2019 Eremin D, Denisova E, Kostyukovich A, Martens J, Berden G, Oomens J, Khrustalev V, Chernyshev V, Ananikov VP. Ionic Pd/NHC Catalytic System Enables Recoverable Homogeneous Catalysis. Mechanistic Study and Application in the Mizoroki-Heck Reaction. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 31461192 DOI: 10.1002/Chem.201903221  0.311
2019 Avilés-Moreno JR, Berden G, Oomens J, Martínez-Haya B. Insights into the Recognition of Phosphate Groups by Peptidic Arginine from Action Spectroscopy and Quantum Chemical Computations. The Journal of Physical Chemistry. B. PMID 31449420 DOI: 10.1021/Acs.Jpcb.9B06201  0.412
2019 Aviles-Moreno JR, Berden G, Oomens J, Martínez-Haya B. Insights into the Recognition of Phosphate Groups by Peptidic Arginine from Action Spectroscopy and Quantum Chemical Computations. The Journal of Physical Chemistry. A. PMID 31414806 DOI: 10.1021/acs.jpca.9b06201  0.305
2019 Paul M, Peckelsen K, Thomulka T, Neudörfl J, Martens J, Berden G, Oomens J, Berkessel A, Meijer AJHM, Schäfer M. Hydrogen tunneling avoided: enol-formation from a charge-tagged phenyl pyruvic acid derivative evidenced by tandem-MS, IR ion spectroscopy and theory. Physical Chemistry Chemical Physics : Pccp. PMID 31317140 DOI: 10.1039/C9Cp02316J  0.448
2019 Hamlow LA, Nei YW, Wu RR, Gao J, Steill JD, Berden G, Oomens J, Rodgers MT. Impact of Sodium Cationization on Gas-Phase Conformations of DNA and RNA Cytidine Mononucleotides. Journal of the American Society For Mass Spectrometry. PMID 31286444 DOI: 10.1007/S13361-019-02274-8  0.486
2019 Walhout EQ, Dorn SE, Martens J, Berden G, Oomens J, Cheong PH, Kroll JH, O'Brien RE. Infrared Ion Spectroscopy of Environmental Organic Mixtures: Probing the Composition of α-pinene Secondary Organic Aerosol. Environmental Science & Technology. PMID 31184875 DOI: 10.1021/Acs.Est.9B02077  0.444
2019 Smith ZM, Wang X, Scheerer JR, Martens J, Berden G, Oomens J, Steinmetz V, Somogyi A, Wysocki V, Poutsma JC. Spectroscopic Evidence for Lactam Formation in Terminal Ornithine b and b Fragment Ions. Journal of the American Society For Mass Spectrometry. PMID 31183839 DOI: 10.1007/S13361-019-02244-0  0.459
2019 Devereaux ZJ, He CC, Zhu Y, Roy HA, Cunningham NA, Hamlow LA, Berden G, Oomens J, Rodgers MT. Structures and Relative Glycosidic Bond Stabilities of Protonated 2'-Fluoro-Substituted Purine Nucleosides. Journal of the American Society For Mass Spectrometry. PMID 31111413 DOI: 10.1007/S13361-019-02222-6  0.391
2019 Jusko P, Brünken S, Asvany O, Thorwirth S, Stoffels A, van der Meer L, Berden G, Redlich B, Oomens J, Schlemmer S. The FELion cryogenic ion trap beam line at the FELIX free-electron laser laboratory: infrared signatures of primary alcohol cations. Faraday Discussions. PMID 31062783 DOI: 10.1039/C8Fd00225H  0.488
2019 Munshi MU, Martens J, Berden G, Oomens J. Gas-Phase Infrared Ion Spectroscopy Characterization of Cu(II/I)Cyclam and Cu(II/I)2,2'-Bipyridine Redox Pairs. The Journal of Physical Chemistry. A. PMID 31021091 DOI: 10.1021/Acs.Jpca.9B00793  0.401
2019 Elferink H, Mensink R, Castelijns W, Jansen O, Bruekers J, Oomens J, Martens J, Rijs A, Boltje T. The Glycosylation Mechanisms of 6,3-Uronic Acid Lactones. Angewandte Chemie (International Ed. in English). PMID 31017713 DOI: 10.1002/Anie.201902507  0.355
2019 Kempkes LJM, Martens J, Berden G, Houthuijs KJ, Oomens J. Investigation of the position of the radical in z-ions resulting from electron transfer dissociation using infrared ion spectroscopy. Faraday Discussions. PMID 31012451 DOI: 10.1039/C8Fd00202A  0.474
2019 Avilés-Moreno JR, Berden G, Oomens J, Martínez-Haya B. A Cl Hinge for Cyclen Macrocycles: Ionic Interactions and Tweezer-Like Complexes. Frontiers in Chemistry. 7: 143. PMID 30968013 DOI: 10.3389/Fchem.2019.00143  0.482
2019 Hamlow LA, Devereaux ZJ, Roy HA, Cunningham NA, Berden G, Oomens J, Rodgers MT. Impact of the 2'- and 3'-Sugar Hydroxyl Moieties on Gas-Phase Nucleoside Structure. Journal of the American Society For Mass Spectrometry. PMID 30850972 DOI: 10.1007/S13361-019-02155-0  0.474
2019 Perez E, Corcovilos TA, Gibson JK, Martens J, Berden G, Oomens J, Van Stipdonk MJ. Isotope labeling and infrared multiple-photon photodissociation investigation of product ions generated by dissociation of [ZnNO(CHOH)]: Conversion of methanol to formaldehyde. European Journal of Mass Spectrometry (Chichester, England). 25: 58-72. PMID 30773924 DOI: 10.1177/1469066718809881  0.381
2019 Armentrout PB, Baer T, Beauchamp JJL, Oomens J, Rodgers MT, Ryzhov V. Robert C. Dunbar (1943-2017). European Journal of Mass Spectrometry (Chichester, England). 25: 4-7. PMID 30773920 DOI: 10.1177/1469066718817619  0.36
2019 Palotás J, Martens J, Berden G, Oomens J. The infrared spectrum of protonated buckminsterfullerene C60H+ Nature Astronomy. 4: 240-245. DOI: 10.1038/S41550-019-0941-6  0.372
2019 Devereaux ZJ, Roy H, He C, Zhu Y, Cunningham N, Hamlow L, Berden G, Oomens J, Rodgers M. Influence of 2′-fluoro modification on glycosidic bond stabilities and gas-phase ion structures of protonated pyrimidine nucleosides Journal of Fluorine Chemistry. 219: 10-22. DOI: 10.1016/J.Jfluchem.2018.12.004  0.453
2019 Tatosian I, Metzler L, Graca C, Bubas A, Corcovilos T, Martens J, Berden G, Oomens J, Van Stipdonk MJ. Measurement of the asymmetric UO22+ stretching frequency for [UVIO2(F)3]- using IRMPD spectroscopy International Journal of Mass Spectrometry. 446: 116231. DOI: 10.1016/J.Ijms.2019.116231  0.35
2019 Switzer C, Martens J, Kempkes LJ, Berden G, Oomens J, Morton TH. Gas-phase vibrations of the anionic, hydrogen-bonded dimer of 9-methylguanine International Journal of Mass Spectrometry. 446: 116211. DOI: 10.1016/J.Ijms.2019.116211  0.43
2019 Batoon P, Zhang Y, Berden G, Oomens J, Ren J. Characterization of protonated AcAlaDab and AcDabAla by IRMPD spectroscopy and molecular modeling International Journal of Mass Spectrometry. 444: 116178. DOI: 10.1016/J.Ijms.2019.116178  0.538
2019 van Outersterp RE, Houthuijs KJ, Berden G, Engelke UF, Kluijtmans LA, Wevers RA, Coene KL, Oomens J, Martens J. Reference-standard free metabolite identification using infrared ion spectroscopy International Journal of Mass Spectrometry. 443: 77-85. DOI: 10.1016/J.Ijms.2019.05.015  0.382
2019 Berden G, Derksen M, Houthuijs KJ, Martens J, Oomens J. An automatic variable laser attenuator for IRMPD spectroscopy and analysis of power-dependence in fragmentation spectra International Journal of Mass Spectrometry. 443: 1-8. DOI: 10.1016/J.Ijms.2019.05.013  0.39
2019 Boles GC, Kempkes LJ, Martens J, Berden G, Oomens J, Armentrout P. Ion spectroscopy and guided ion beam studies of protonated asparaginyl-threonine decomposition: Influence of a hydroxyl containing C-Terminal residue on deamidation processes International Journal of Mass Spectrometry. 442: 64-82. DOI: 10.1016/J.Ijms.2019.05.010  0.491
2019 Lau JK, Lai C, Lam KB, Chu IK, Martens J, Berden G, Oomens J, Hopkinson AC, Siu KM. Structures of [GPGG + H – H2O]+ and [GPGG + H – H2O – NH CH2]+ ions; evidence of rearrangement prior to dissociation International Journal of Mass Spectrometry. 442: 51-57. DOI: 10.1016/J.Ijms.2019.04.006  0.43
2019 Soley EO, Devereaux ZJ, Hamlow L, Berden G, Oomens J, Rodgers M. IRMPD action spectroscopy, ER-CID experiments, and theoretical approaches investigate intrinsic L-thymidine properties compared to D-thymidine: Findings support robust methodology International Journal of Mass Spectrometry. 441: 32-43. DOI: 10.1016/J.Ijms.2019.04.003  0.375
2019 Hamlow L, He C, Devereaux ZJ, Roy H, Cunningham N, Soley EO, Berden G, Oomens J, Rodgers M. Gas-phase structures of protonated arabino nucleosides International Journal of Mass Spectrometry. 438: 124-134. DOI: 10.1016/J.Ijms.2019.01.005  0.397
2018 Martínez-Haya B, Avilés-Moreno JR, Gámez F, Berden G, Oomens J. Preferential host-guest coordination of nonactin with ammonium and hydroxylammonium. The Journal of Chemical Physics. 149: 225101. PMID 30553267 DOI: 10.1063/1.5049956  0.418
2018 Owen CJ, Boles GC, Berden G, Oomens J, Armentrout PB. Experimental and theoretical investigations of infrared multiple photon dissociation spectra of lysine complexes with Zn and Cd. European Journal of Mass Spectrometry (Chichester, England). 1469066718792902. PMID 30526028 DOI: 10.1177/1469066718792902  0.482
2018 van Outersterp RE, Martens J, Berden G, Steill JD, Oomens J, Rijs AM. Structural characterization of nucleotide 5'-triphosphates by infrared ion spectroscopy and theoretical studies. Physical Chemistry Chemical Physics : Pccp. 20: 28319-28330. PMID 30398499 DOI: 10.1039/C8Cp03314E  0.428
2018 Kempkes LJM, Martens J, Berden G, Oomens J. Spectroscopic Characterization of an Extensive Set of c-Type Peptide Fragment Ions Formed by Electron Transfer Dissociation Suggests Exclusive Formation of Amide Isomers. The Journal of Physical Chemistry Letters. 6404-6411. PMID 30343579 DOI: 10.1021/Acs.Jpclett.8B02850  0.464
2018 Bouwman J, Horst S, Oomens J. Spectroscopic characterization of the product ions formed by electron ionization of adamantane. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 30307689 DOI: 10.1002/Cphc.201800846  0.477
2018 Featherstone J, Chong T, Martens J, Oomens J, McMahon TB. Inverse Sandwich Cyclopentadienyl Complexes of Sodium in the Gas Phase. The Journal of Physical Chemistry. A. PMID 30303368 DOI: 10.1021/Acs.Jpca.8B09366  0.482
2018 Piatkivskyi A, Lau JK, Berden G, Oomens J, Hopkinson AC, Siu KM, Ryzhov V. Hydrogen atom transfer in the radical cations of tryptophan-containing peptides AW and WA studied by mass spectrometry, infrared multiple-photon dissociation spectroscopy, and theoretical calculations. European Journal of Mass Spectrometry (Chichester, England). 1469066718802547. PMID 30282467 DOI: 10.1177/1469066718802547  0.433
2018 Kempkes LJM, Martens J, Berden G, Oomens J. w-type ions formed by Electron Transfer Dissociation of Cys-containing peptides investigated by infrared ion spectroscopy. Journal of Mass Spectrometry : Jms. PMID 30281881 DOI: 10.1002/Jms.4298  0.448
2018 Oomens J, Polfer NC, Berden G, Eyler JR. Gas-phase metal ion chelation investigated with IRMPD spectroscopy: A brief review of Robert Dunbar's contributions. European Journal of Mass Spectrometry (Chichester, England). 1469066718799175. PMID 30205710 DOI: 10.1177/1469066718799175  0.459
2018 Hamlow LA, Zhu Y, Devereaux ZJ, Cunningham NA, Berden G, Oomens J, Rodgers MT. Modified Quadrupole Ion Trap Mass Spectrometer for Infrared Ion Spectroscopy: Application to Protonated Thiated Uridines. Journal of the American Society For Mass Spectrometry. PMID 30136214 DOI: 10.1007/S13361-018-2047-2  0.51
2018 Chalifoux AM, Boles GC, Berden G, Oomens J, Armentrout PB. Experimental and theoretical investigations of infrared multiple photon dissociation spectra of arginine complexes with Zn and Cd. Physical Chemistry Chemical Physics : Pccp. 20: 20712-20725. PMID 30062355 DOI: 10.1039/c8cp03484b  0.37
2018 Chakrabarty S, DiTucci MJ, Berden G, Oomens J, Williams ER. Structural Investigation of the Hormone Melatonin and Its Alkali and Alkaline Earth Metal Complexes in the Gas Phase. Journal of the American Society For Mass Spectrometry. PMID 30006822 DOI: 10.1007/S13361-018-2020-0  0.474
2018 Smith ZM, Steinmetz V, Martens J, Oomens J, Poutsma JC. Infrared Multiple Photon Dissociation Spectroscopy of Cationized Canavanine: Side-Chain Substitution Influences Gas-Phase Zwitterion Formation. International Journal of Mass Spectrometry. 429: 158-173. PMID 29962900 DOI: 10.1016/J.Ijms.2017.08.009  0.501
2018 Lam KHB, Lau JK, Lai CK, Chu IK, Martens J, Berden G, Oomens J, Hopkinson AC, Siu KWM. Loss of water from protonated polyglycines: interconversion and dissociation of the product imidazolone ions. Physical Chemistry Chemical Physics : Pccp. PMID 29956702 DOI: 10.1039/C8Cp02543F  0.419
2018 Aviles-Moreno JR, Berden G, Oomens J, Martinez-Haya B. Complexes of crown ether macrocyles with methyl guanidinium: insights into the capture of charge in peptides. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 29944200 DOI: 10.1002/Cphc.201800596  0.448
2018 Dunbar RC, Martens J, Berden G, Oomens J. Binding of Divalent Metal Ions with Deprotonated Peptides: Do Gas-Phase Anions Parallel the Condensed Phase? The Journal of Physical Chemistry. A. PMID 29847124 DOI: 10.1021/Acs.Jpca.8B02926  0.458
2018 Heiles S, Berden G, Oomens J, Williams ER. Competition between salt bridge and non-zwitterionic structures in deprotonated amino acid dimers. Physical Chemistry Chemical Physics : Pccp. PMID 29845141 DOI: 10.1039/C8Cp01458B  0.395
2018 Elferink H, Severijnen ME, Martens J, Mensink RA, Berden G, Oomens J, Rutjes FPJT, Rijs AM, Boltje TJ. Direct Experimental Characterization of Glycosyl Cations by Infrared Ion Spectroscopy. Journal of the American Chemical Society. PMID 29656643 DOI: 10.1021/Jacs.8B01236  0.527
2018 Jian J, Hu SX, Li WL, van Stipdonk MJ, Martens J, Berden G, Oomens J, Li J, Gibson JK. Uranyl/12-crown-4 Ether Complexes and Derivatives: Structural Characterization and Isomeric Differentiation. Inorganic Chemistry. PMID 29558121 DOI: 10.1021/Acs.Inorgchem.8B00306  0.394
2018 Avilés-Moreno JR, Berden G, Oomens J, Martínez-Haya B. Intra-cavity proton bonding and anharmonicity in the anionophore cyclen. Physical Chemistry Chemical Physics : Pccp. 20: 8968-8975. PMID 29557457 DOI: 10.1039/C8Cp00660A  0.416
2018 Martens J, Berden G, Bentlage H, Coene KLM, Engelke UF, Wishart D, van Scherpenzeel M, Kluijtmans LAJ, Wevers RA, Oomens J. Unraveling the unknown areas of the human metabolome: the role of infrared ion spectroscopy. Journal of Inherited Metabolic Disease. PMID 29556837 DOI: 10.1007/S10545-018-0161-8  0.404
2018 Iacobucci C, Reale S, Aschi M, Oomens J, Berden G, De Angelis F. An unprecedented retro-Mumm rearrangement revealed by ESI-MS/MS, IRMPD spectroscopy, and DFT calculations. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 29517821 DOI: 10.1002/Chem.201800347  0.365
2018 Martin-Somer A, Martens J, Grzetic J, Hase WL, Oomens J, Spezia R. Unimolecular Fragmentation of Deprotonated Diproline [Pro-H]Studied by Chemical Dynamics Simulations and IRMPD Spectroscopy. The Journal of Physical Chemistry. A. PMID 29451797 DOI: 10.1021/Acs.Jpca.7B11873  0.427
2018 Kempkes LJM, Boles GC, Martens J, Berden G, Armentrout PB, Oomens J. Deamidation of Protonated Asparagine-Valine Investigated by a Combined Spectroscopic, Guided Ion Beam, and Theoretical Study. The Journal of Physical Chemistry. A. PMID 29436829 DOI: 10.1021/Acs.Jpca.7B12348  0.443
2018 Batoon PM, Oomens J, Berden G, Ren J. Conformations of Protonated AlaDap and DapAla Characterized by IRMPD Spectroscopy and Molecular Modeling. The Journal of Physical Chemistry. B. PMID 29376656 DOI: 10.1021/Acs.Jpcb.7B10435  0.486
2018 Avilés-Moreno JR, Berden G, Oomens J, Martínez-Haya B. Guanidinium/ammonium competition and proton transfer in the interaction of the amino acid arginine with the tetracarboxylic 18-crown-6 ionophore. Physical Chemistry Chemical Physics : Pccp. PMID 29354835 DOI: 10.1039/C7Cp07975C  0.395
2018 Maltseva E, Mackie CJ, Candian A, Petrignani A, Huang X, Lee TJ, Tielens AGGM, Oomens J, Buma WJ. High-resolution IR absorption spectroscopy of polycyclic aromatic hydrocarbons in the 3 μm region: role of hydrogenation and alkylation Astronomy & Astrophysics. 610: A65. DOI: 10.1051/0004-6361/201732102  0.434
2018 Gibson JK, de Jong WA, van Stipdonk MJ, Martens J, Berden G, Oomens J. Equatorial coordination of uranyl: Correlating ligand charge donation with the Oyl-U-Oyl asymmetric stretch frequency Journal of Organometallic Chemistry. 857: 94-100. DOI: 10.1016/J.Jorganchem.2017.10.010  0.378
2018 Bendo J, Martens J, Berden G, Oomens J, Morton TH. Gas phase vibrations of an anionic, hydrogen-bonded homodimer of a nucleobase analogue: Isocytosino-8-trifluoromethylquinolone International Journal of Mass Spectrometry. 429: 206-211. DOI: 10.1016/J.Ijms.2018.01.004  0.46
2018 Dunbar RC, Martens J, Berden G, Oomens J. Transition metal(II) complexes of histidine-containing tripeptides: Structures, and infrared spectroscopy by IRMPD International Journal of Mass Spectrometry. 429: 198-205. DOI: 10.1016/J.Ijms.2017.10.004  0.511
2018 Kempkes LJ, Martens J, Berden G, Oomens J. Dehydration reactions of protonated dipeptides containing asparagine or glutamine investigated by infrared ion spectroscopy International Journal of Mass Spectrometry. 429: 90-100. DOI: 10.1016/J.Ijms.2017.06.004  0.433
2018 Zhu Y, Hamlow L, He C, Roy H, Cunningham N, Munshi M, Berden G, Oomens J, Rodgers M. Conformations and N-glycosidic bond stabilities of sodium cationized 2′-deoxycytidine and cytidine: Solution conformation of [Cyd + Na]+ is preserved upon ESI International Journal of Mass Spectrometry. 429: 18-27. DOI: 10.1016/J.Ijms.2017.04.005  0.465
2017 Mackie CJ, Candian A, Huang X, Maltseva E, Petrignani A, Oomens J, Buma WJ, Lee TJ, Tielens AGGM. The anharmonic quartic force field infrared spectra of hydrogenated and methylated PAHs. Physical Chemistry Chemical Physics : Pccp. PMID 29242883 DOI: 10.1039/C7Cp06546A  0.443
2017 Avilés-Moreno JR, Berden G, Oomens J, Martínez-Haya B. Isolated complexes of the amino acid arginine with polyether and polyamine macrocycles, the role of proton transfer. Physical Chemistry Chemical Physics : Pccp. PMID 29149235 DOI: 10.1039/C7Cp04270A  0.416
2017 Wu RR, Hamlow LA, He CC, Nei YW, Berden G, Oomens J, Rodgers MT. The intrinsic basicity of the phosphate backbone exceeds that of uracil and thymine residues: protonation of the phosphate moiety is preferred over the nucleobase for pdThd and pUrd. Physical Chemistry Chemical Physics : Pccp. PMID 29099122 DOI: 10.1039/C7Cp05521H  0.393
2017 Abergel RJ, de Jong WA, Deblonde GJ, Dau PD, Captain I, Eaton TM, Jian J, van Stipdonk MJ, Martens J, Berden G, Oomens J, Gibson JK. Cleaving Off Uranyl Oxygens through Chelation: A Mechanistic Study in the Gas Phase. Inorganic Chemistry. PMID 29019408 DOI: 10.1021/Acs.Inorgchem.7B01720  0.41
2017 Munshi MU, Craig SM, Berden G, Martens J, DeBlase AF, Foreman DJ, McLuckey SA, Oomens J, Johnson MA. Preparation of Labile Ni(+)(cyclam) Cations in the Gas Phase Using Electron Transfer Reduction through Ion-Ion Recombination in an Ion Trap and Structural Characterization with Vibrational Spectroscopy. The Journal of Physical Chemistry Letters. PMID 28961009 DOI: 10.1021/Acs.Jpclett.7B02223  0.451
2017 Bendo JA, Martens J, Berden G, Oomens J, Morton TH. Hydrogen Liberation from Gaseous 2-Bora-1,3-Diazacycloalkanium Cations. The Journal of Physical Chemistry. A. PMID 28934854 DOI: 10.1021/Acs.Jpca.7B07990  0.439
2017 Akinyemi TE, Wu RR, Nei YW, Cunningham NA, Roy HA, Steill JD, Berden G, Oomens J, Rodgers MT. Influence of Transition Metal Cationization versus Sodium Cationization and Protonation on the Gas-Phase Tautomeric Conformations and Stability of Uracil: Application to [Ura+Cu](+) and [Ura+Ag](). Journal of the American Society For Mass Spectrometry. PMID 28895083 DOI: 10.1007/S13361-017-1771-3  0.399
2017 Carita Correra T, Santos Fernandes A, Mota Reginato M, Colucci Ducati L, Berden G, Oomens J. Probing the geometry reorganization from solution to gas-phase in putrescine derivatives by IRMPD, (1)H-NMR and theoretical calculations. Physical Chemistry Chemical Physics : Pccp. PMID 28849823 DOI: 10.1039/C7Cp04617K  0.437
2017 Zhu Y, Roy HA, Cunningham NA, Strobehn SF, Gao J, Munshi MU, Berden G, Oomens J, Rodgers MT. IRMPD Action Spectroscopy, ER-CID Experiments, and Theoretical Studies of Sodium Cationized Thymidine and 5-Methyluridine: Kinetic Trapping During the ESI Desolvation Process Preserves the Solution Structure of [Thd+Na](). Journal of the American Society For Mass Spectrometry. PMID 28836109 DOI: 10.1007/S13361-017-1753-5  0.435
2017 Peckelsen K, Martens J, Czympiel L, Oomens J, Berden G, Gründemann D, Meijer AJHM, Schäfer M. Ergothioneine and related histidine derivatives in the gas phase: tautomer structures determined by IRMPD spectroscopy and theory. Physical Chemistry Chemical Physics : Pccp. PMID 28825745 DOI: 10.1039/C7Cp03843G  0.468
2017 Zhu Y, Roy HA, Cunningham NA, Strobehn SF, Gao J, Munshi MU, Berden G, Oomens J, Rodgers MT. Effects of sodium cationization versus protonation on the conformations and N-glycosidic bond stabilities of sodium cationized Urd and dUrd: solution conformation of [Urd+Na](+) is preserved upon ESI. Physical Chemistry Chemical Physics : Pccp. PMID 28665436 DOI: 10.1039/C7Cp02377D  0.404
2017 Munshi MU, Berden G, Martens J, Oomens J. Gas-phase vibrational spectroscopy of triphenylamine: the effect of charge on structure and spectra. Physical Chemistry Chemical Physics : Pccp. PMID 28627542 DOI: 10.1039/C7Cp02638B  0.507
2017 Martens J, Berden G, van Outersterp RE, Kluijtmans LAJ, Engelke UF, van Karnebeek CDM, Wevers RA, Oomens J. Molecular identification in metabolomics using infrared ion spectroscopy. Scientific Reports. 7: 3363. PMID 28611404 DOI: 10.1038/S41598-017-03387-4  0.424
2017 Vala MT, Oomens J, Berden G. Structure and Dissociation Pathways of Protonated Tetralin (1,2,3,4-Tetrahydronaphthalene). The Journal of Physical Chemistry. A. PMID 28574713 DOI: 10.1021/Acs.Jpca.7B01858  0.469
2017 Avilés-Moreno JR, Gámez F, Berden G, Oomens J, Martínez-Haya B. Isolated alkali cation complexes of the antibiotic ionophore nonactin: correlation with crystalline structures. Physical Chemistry Chemical Physics : Pccp. PMID 28569331 DOI: 10.1039/C7Cp02438J  0.405
2017 Dunbar RC, Martens J, Berden G, Oomens J. Water Microsolvation Can Switch the Binding Mode of Ni(II) with Small Peptides. The Journal of Physical Chemistry Letters. 2634-2638. PMID 28537749 DOI: 10.1021/Acs.Jpclett.7B00973  0.417
2017 Wu RR, Hamlow LA, He CC, Nei YW, Berden G, Oomens J, Rodgers MT. N3 and O2 Protonated Conformers of the Cytosine Mononucleotides Coexist in the Gas Phase. Journal of the American Society For Mass Spectrometry. PMID 28497356 DOI: 10.1007/S13361-017-1653-8  0.44
2017 Boles GC, Owen CJ, Berden G, Oomens J, Armentrout PB. Experimental and theoretical investigations of infrared multiple photon dissociation spectra of glutamic acid complexes with Zn(2+) and Cd(2). Physical Chemistry Chemical Physics : Pccp. PMID 28462956 DOI: 10.1039/C7Cp01786C  0.445
2017 Poutsma JC, Martens J, Oomens J, Maitre P, Steinmetz V, Bernier M, Jia M, Wysocki V. Infrared Multiple-Photon Dissociation Action Spectroscopy of the b2(+) Ion from PPG: Evidence of Third Residue Affecting b2(+) Fragment Structure. Journal of the American Society For Mass Spectrometry. PMID 28374317 DOI: 10.1007/S13361-017-1659-2  0.473
2017 Martens J, Koppen V, Berden G, Cuyckens F, Oomens J. Combined Liquid Chromatography-Infrared Ion Spectroscopy for Identification of Regioisomeric Drug Metabolites. Analytical Chemistry. PMID 28368097 DOI: 10.1021/Acs.Analchem.7B00577  0.426
2017 Zhu Y, Hamlow LA, He C, Lee JK, Gao J, Berden G, Oomens J, Rodgers MT. Gas-Phase Conformations and N-Glycosidic Bond Stabilities of Sodium Cationized 2'-Deoxyguanosine and Guanosine: Sodium Cations Preferentially Bind to the Guanine Residue. The Journal of Physical Chemistry. B. PMID 28355483 DOI: 10.1021/Acs.Jpcb.7B02906  0.475
2017 Schäfer M, Peckelsen K, Paul M, Martens J, Oomens J, Berden G, Berkessel A, Meijer AJ. Hydrogen Tunneling Above Room Temperature Evidenced by Infrared Ion Spectroscopy. Journal of the American Chemical Society. PMID 28282985 DOI: 10.1021/Jacs.6B10348  0.459
2017 de Jong WA, Dau PD, Wilson RE, Marçalo J, Van Stipdonk MJ, Corcovilos TA, Berden G, Martens J, Oomens J, Gibson JK. Revealing Disparate Chemistries of Protactinium and Uranium. Synthesis of the Molecular Uranium Tetroxide Anion, UO4(). Inorganic Chemistry. PMID 28276685 DOI: 10.1021/Acs.Inorgchem.7B00144  0.338
2017 Aviles-Moreno JR, Berden G, Oomens J, Martinez-Haya B. Benchmark ditopic binding of Cl- and Cs+ by the macrocycle hexacyclen. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 28211620 DOI: 10.1002/Cphc.201700091  0.468
2017 Schindler B, Barnes L, Gray CJ, Chambert S, Flitsch SL, Oomens J, Daniel R, Allouche AR, Compagnon I. IRMPD Spectroscopy Sheds New (InfraRed) Light on the Sulfate Pattern of Carbohydrates. The Journal of Physical Chemistry. A. PMID 28198185 DOI: 10.1021/Acs.Jpca.6B11642  0.486
2017 de Haas AJ, Oomens J, Bouwman J. Facile pentagon formation in the dissociation of polyaromatics. Physical Chemistry Chemical Physics : Pccp. PMID 28079220 DOI: 10.1039/C6Cp08349H  0.439
2017 Peckelsen K, Martens J, Berden G, Oomens J, Dunbar RC, Meijer AJ, Schäfer M. Gas-phase complexes of Ni 2+ and Ca 2+ with deprotonated histidylhistidine (HisHis): A model case for polyhistidyl-metal binding motifs Journal of Molecular Spectroscopy. 332: 38-44. DOI: 10.1016/J.Jms.2016.10.008  0.406
2017 Oomens J, Berden G, Martens J, Morton TH. Intramolecular proton transfer from one ether oxygen to another International Journal of Mass Spectrometry. 418: 188-192. DOI: 10.1016/J.Ijms.2016.08.012  0.395
2016 Boles GC, Coates RA, Berden G, Oomens J, Armentrout PB. Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Asparagine Complexes with Zn(2+) and Cd(2+) and Their Deamidation Processes. The Journal of Physical Chemistry. B. 120: 12486-12500. PMID 27973834 DOI: 10.1021/Acs.Jpcb.6B10326  0.46
2016 Oomens J, Berden G, Morton TH. Low-Frequency CH Stretch Vibrations of Free Alkoxide Ions. Angewandte Chemie (International Ed. in English). PMID 27921354 DOI: 10.1002/Anie.201609437  0.377
2016 Martens J, Berden G, Gebhardt CR, Oomens J. Infrared ion spectroscopy in a modified quadrupole ion trap mass spectrometer at the FELIX free electron laser laboratory. The Review of Scientific Instruments. 87: 103108. PMID 27802712 DOI: 10.1063/1.4964703  0.461
2016 Hu SX, Gibson JK, Li WL, Van Stipdonk MJ, Martens J, Berden G, Redlich B, Oomens J, Li J. Electronic structure and characterization of a uranyl di-15-crown-5 complex with an unprecedented sandwich structure. Chemical Communications (Cambridge, England). PMID 27725983 DOI: 10.1039/C6Cc07205D  0.381
2016 Dunbar RC, Martens J, Berden G, Oomens J. Complexes of Ni(ii) and Cu(ii) with small peptides: deciding whether to deprotonate. Physical Chemistry Chemical Physics : Pccp. 18: 26923-26932. PMID 27711408 DOI: 10.1039/C6Cp03974J  0.426
2016 Nieto P, Günther A, Berden G, Oomens J, Dopfer O. IRMPD Spectroscopy of Metalated Flavins: Structure and Bonding of Lumiflavin Complexes with Alkali and Coinage Metal Ions. The Journal of Physical Chemistry. A. PMID 27690438 DOI: 10.1021/Acs.Jpca.6B08281  0.455
2016 Gao J, Bouwman J, Berden G, Oomens J. The Influence of Metal Ion Binding on the IR Spectra of Nitrogen-Containing PAHs. The Journal of Physical Chemistry. A. PMID 27648745 DOI: 10.1021/Acs.Jpca.6B05060  0.51
2016 Kempkes LJ, Martens J, Grzetic J, Berden G, Oomens J. Deamidation Reactions of Asparagine- and Glutamine-Containing Dipeptides Investigated by Ion Spectroscopy. Journal of the American Society For Mass Spectrometry. PMID 27624159 DOI: 10.1007/S13361-016-1462-5  0.451
2016 Mackie CJ, Candian A, Huang X, Maltseva E, Petrignani A, Oomens J, Mattioda AL, Buma WJ, Lee TJ, Tielens AG. The anharmonic quartic force field infrared spectra of five non-linear polycyclic aromatic hydrocarbons: Benz[a]anthracene, chrysene, phenanthrene, pyrene, and triphenylene. The Journal of Chemical Physics. 145: 084313. PMID 27586928 DOI: 10.1063/1.4961438  0.429
2016 Álvaro Galué H, Oomens J, Buma WJ, Redlich B. Electron-flux infrared response to varying π-bond topology in charged aromatic monomers. Nature Communications. 7: 12633. PMID 27577323 DOI: 10.1038/Ncomms12633  0.377
2016 Zhu Y, Hamlow LA, He C, Strobehn SF, Lee JK, Gao J, Berden G, Oomens J, Rodgers MT. Influence of Sodium Cationization versus Protonation on the Gas-Phase Conformations and Glycosidic Bond Stabilities of 2'-Deoxyadenosine and Adenosine. The Journal of Physical Chemistry. B. PMID 27494378 DOI: 10.1021/Acs.Jpcb.6B06105  0.497
2016 Coates RA, Boles GC, McNary CP, Berden G, Oomens J, Armentrout PB. Zn(2+) and Cd(2+) cationized serine complexes: infrared multiple photon dissociation spectroscopy and density functional theory investigations. Physical Chemistry Chemical Physics : Pccp. PMID 27465924 DOI: 10.1039/C6Cp03805K  0.492
2016 Martens J, Grzetic J, Berden G, Oomens J. Structural identification of electron transfer dissociation products in mass spectrometry using infrared ion spectroscopy. Nature Communications. 7: 11754. PMID 27277826 DOI: 10.1038/Ncomms11754  0.45
2016 Kiawi DM, Chernyy V, Oomens J, Buma WJ, Jamshidi Z, Visscher L, Waters R, Bakker JM. Water Dissociation upon Adsorption onto Free Iron Clusters Is Size Dependent. The Journal of Physical Chemistry Letters. PMID 27266896 DOI: 10.1021/Acs.Jpclett.6B00891  0.321
2016 Martens J, Berden G, Oomens J. Structures of Fluoranthene Reagent Anions Used in Electron Transfer Dissociation and Proton Transfer Reaction Tandem Mass Spectrometry. Analytical Chemistry. PMID 27228406 DOI: 10.1021/Acs.Analchem.6B01483  0.428
2016 Wu RR, He CC, Hamlow LA, Nei YW, Berden G, Oomens J, Rodgers MT. Protonation induces base rotation of purine nucleotides pdGuo and pGuo. Physical Chemistry Chemical Physics : Pccp. PMID 27197049 DOI: 10.1039/C6Cp01354F  0.403
2016 Wu R, He C, Hamlow L, Nei YW, Berden G, Oomens J, Rodgers MT. N3 Protonation Induces Base Rotation of 2'-Deoxyadenosine-5'-Monophosphate and Adenosine-5'-Monophosphate. The Journal of Physical Chemistry. B. PMID 27138137 DOI: 10.1021/Acs.Jpcb.6B04052  0.452
2016 Shaffer CJ, Martens J, Marek A, Oomens J, Tureček F. Photoleucine Survives Backbone Cleavage by Electron Transfer Dissociation. A Near-UV Photodissociation and Infrared Multiphoton Dissociation Action Spectroscopy Study. Journal of the American Society For Mass Spectrometry. PMID 27059977 DOI: 10.1007/S13361-016-1390-4  0.466
2016 Gao J, Berden G, Rodgers MT, Oomens J. Interaction of Cu(+) with cytosine and formation of i-motif-like C-M(+)-C complexes: alkali versus coinage metals. Physical Chemistry Chemical Physics : Pccp. PMID 26894838 DOI: 10.1039/C6Cp00234J  0.408
2016 Lesslie M, Lau JK, Lawler JT, Siu KW, Oomens J, Berden G, Hopkinson AC, Ryzhov V. Alkali-Metal-Ion-Assisted Hydrogen Atom Transfer in the Homocysteine Radical. Chemistry (Weinheim An Der Bergstrasse, Germany). 22: 2243-6. PMID 26836574 DOI: 10.1002/Chem.201504631  0.461
2016 Kempkes LJ, Martens JK, Grzetic J, Berden G, Oomens J. Deamidation reactions of protonated asparagine and glutamine investigated by ion spectroscopy. Rapid Communications in Mass Spectrometry : Rcm. 30: 483-90. PMID 26777678 DOI: 10.1002/Rcm.7464  0.409
2016 Bouwman J, de Haas AJ, Oomens J. Spectroscopic evidence for the formation of pentalene(+) in the dissociative ionization of naphthalene. Chemical Communications (Cambridge, England). PMID 26751413 DOI: 10.1039/C5Cc10090A  0.397
2016 Maltseva E, Petrignani A, Candian A, Mackie CJ, Huang X, Lee TJ, Tielens AGGM, Oomens J, Buma WJ. HIGH-RESOLUTION IR ABSORPTION SPECTROSCOPY OF POLYCYCLIC AROMATIC HYDROCARBONS IN THE 3μm REGION: ROLE OF PERIPHERY The Astrophysical Journal. 831: 58. DOI: 10.3847/0004-637X/831/1/58  0.439
2016 Petrignani A, Vala M, Eyler JR, Tielens AGGM, Berden G, van der Meer AFG, Redlich B, Oomens J. BREAKDOWN PRODUCTS OF GASEOUS POLYCYCLIC AROMATIC HYDROCARBONS INVESTIGATED WITH INFRARED ION SPECTROSCOPY The Astrophysical Journal. 826: 33. DOI: 10.3847/0004-637X/826/1/33  0.478
2016 Maltseva E, Petrignani A, Candian A, Mackie CJ, Huang X, Lee TJ, Tielens AGGM, Oomens J, Buma WJ. ERRATUM: “HIGH-RESOLUTION IR ABSORPTION SPECTROSCOPY OF POLYCYCLIC AROMATIC HYDROCARBONS: THE REALM OF ANHARMONICITY” (2015, ApJ, 814, 23) The Astrophysical Journal. 820: 81. DOI: 10.3847/0004-637X/820/1/81  0.372
2016 Dau PD, Rios D, Gong Y, Michelini MC, Marçalo J, Shuh DK, Mogannam M, Van Stipdonk MJ, Corcovilos TA, Martens JK, Berden G, Oomens J, Redlich B, Gibson JK. Synthesis and Hydrolysis of Uranyl, Neptunyl, and Plutonyl Gas-Phase Complexes Exhibiting Discrete Actinide-Carbon Bonds Organometallics. 35: 1228-1240. DOI: 10.1021/Acs.Organomet.6B00079  0.418
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. 2,4-Dihydroxy and O2 Protonated Tautomers of dThd and Thd Coexist in the Gas Phase: Methylation Alters Protonation Preferences versus dUrd and Urd. Journal of the American Society For Mass Spectrometry. PMID 26676730 DOI: 10.1007/S13361-015-1303-Y  0.453
2015 Mackie CJ, Candian A, Huang X, Maltseva E, Petrignani A, Oomens J, Buma WJ, Lee TJ, Tielens AG. The anharmonic quartic force field infrared spectra of three polycyclic aromatic hydrocarbons: Naphthalene, anthracene, and tetracene. The Journal of Chemical Physics. 143: 224314. PMID 26671382 DOI: 10.1063/1.4936779  0.467
2015 Heiles S, Cooper RJ, Berden G, Oomens J, Williams ER. Hydrogen bond mediated stabilization of the salt bridge structure for the glycine dimer anion. Physical Chemistry Chemical Physics : Pccp. 17: 30642-7. PMID 26524433 DOI: 10.1039/C5Cp06120B  0.376
2015 He C, Kimutai B, Bao X, Hamlow L, Zhu Y, Strobehn SF, Gao J, Berden G, Oomens J, Chow CS, Rodgers MT. Evaluation of Hybrid Theoretical Approaches for Structural Determination of a Glycine-Linked Cisplatin Derivative via IRMPD Action Spectroscopy. The Journal of Physical Chemistry. A. PMID 26473433 DOI: 10.1021/Acs.Jpca.5B08181  0.391
2015 Kiawi DM, Bakker JM, Oomens J, Buma WJ, Jamshidi Z, Visscher L, Waters LB. Water Adsorption on Free Cobalt Cluster Cations. The Journal of Physical Chemistry. A. 119: 10828-37. PMID 26447780 DOI: 10.1021/Acs.Jpca.5B07119  0.361
2015 Pearson WL, Contreras C, Powell D, Berden G, Oomens J, Bendiak B, Eyler JR. Differentiation of Rubidiated Methyl-d-Glycoside Stereoisomers by Infrared Multiple-Photon Dissociation Spectroscopy in the O-H and C-H Stretching Regions. The Journal of Physical Chemistry. B. 119: 12970-81. PMID 26393375 DOI: 10.1021/Acs.Jpcb.5B06563  0.454
2015 Dunbar RC, Berden G, Martens JK, Oomens J. Divalent Metal-Ion Complexes with Dipeptide Ligands Having Phe and His Side-Chain Anchors: Effects of Sequence, Metal Ion, and Anchor. The Journal of Physical Chemistry. A. 119: 9901-9. PMID 26325483 DOI: 10.1021/Acs.Jpca.5B06315  0.406
2015 Boles GC, Coates RA, Berden G, Oomens J, Armentrout PB. Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Glutamine Complexes with Zn(2+) and Cd(2.). The Journal of Physical Chemistry. B. 119: 11607-17. PMID 26280573 DOI: 10.1021/acs.jpcb.5b06528  0.344
2015 Mogesa B, Perera E, Rhoda HM, Gibson JK, Oomens J, Berden G, van Stipdonk MJ, Nemykin VN, Basu P. Solution, Solid, and Gas Phase Studies on a Nickel Dithiolene System: Spectator Metal and Reactor Ligand. Inorganic Chemistry. 54: 7703-16. PMID 26244772 DOI: 10.1021/Acs.Inorgchem.5B00531  0.325
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. Diverse mixtures of 2,4-dihydroxy tautomers and O4 protonated conformers of uridine and 2'-deoxyuridine coexist in the gas phase. Physical Chemistry Chemical Physics : Pccp. 17: 25978-88. PMID 26225730 DOI: 10.1039/C5Cp02227D  0.416
2015 Barnes L, Schindler B, Allouche AR, Simon D, Chambert S, Oomens J, Compagnon I. Anharmonic simulations of the vibrational spectrum of sulfated compounds: application to the glycosaminoglycan fragment glucosamine 6-sulfate. Physical Chemistry Chemical Physics : Pccp. PMID 26119005 DOI: 10.1039/C5Cp02079D  0.383
2015 Bouwman J, Bodi A, Oomens J, Hemberger P. On the formation of cyclopentadiene in the C3H5˙ + C2H2 reaction. Physical Chemistry Chemical Physics : Pccp. 17: 20508-14. PMID 26086435 DOI: 10.1039/C5Cp02243F  0.306
2015 Ligare MR, Rijs AM, Berden G, Kabelá? M, Nachtigallova D, Oomens J, de Vries MS. Resonant Infrared Multiple Photon Dissociation Spectroscopy of Anionic Nucleotide Monophosphate Clusters. The Journal of Physical Chemistry. B. PMID 26004928 DOI: 10.1021/Acs.Jpcb.5B02222  0.441
2015 Oomens J, Berden G, Morton TH. Negative Hyperconjugation versus Electronegativity: Vibrational Spectra of Free Fluorinated Alkoxide Ions in the Gas Phase. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 16: 1992-5. PMID 25891438 DOI: 10.1002/Cphc.201500177  0.45
2015 Coates RA, McNary CP, Boles GC, Berden G, Oomens J, Armentrout PB. Structural characterization of gas-phase cysteine and cysteine methyl ester complexes with zinc and cadmium dications by infrared multiple photon dissociation spectroscopy. Physical Chemistry Chemical Physics : Pccp. PMID 25880327 DOI: 10.1039/C5Cp01500F  0.481
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. N3 and O2 protonated tautomeric conformations of 2'-deoxycytidine and cytidine coexist in the gas phase. The Journal of Physical Chemistry. B. 119: 5773-84. PMID 25874502 DOI: 10.1021/Jp5130316  0.426
2015 Rijs AM, Oomens J. IR Spectroscopic Techniques to Study Isolated Biomolecules. Topics in Current Chemistry. 364: 1-42. PMID 25814466 DOI: 10.1007/128_2014_621  0.379
2015 Gibson JK, Hu HS, Van Stipdonk MJ, Berden G, Oomens J, Li J. Infrared multiphoton dissociation spectroscopy of a gas-phase complex of uranyl and 3-oxa-glutaramide: an extreme red-shift of the [O═U═O](2+) asymmetric stretch. The Journal of Physical Chemistry. A. 119: 3366-74. PMID 25785482 DOI: 10.1021/Jp512599E  0.446
2015 Wu RR, Yang B, Berden G, Oomens J, Rodgers MT. Gas-phase conformations and energetics of protonated 2'-deoxyadenosine and adenosine: IRMPD action spectroscopy and theoretical studies. The Journal of Physical Chemistry. B. 119: 2795-805. PMID 25622282 DOI: 10.1021/Jp509267K  0.474
2015 Bouwman J, Sztáray B, Oomens J, Hemberger P, Bodi A. Dissociative photoionization of quinoline and isoquinoline. The Journal of Physical Chemistry. A. 119: 1127-36. PMID 25607997 DOI: 10.1021/Jp5121993  0.373
2015 Maltseva E, Petrignani A, Candian A, Mackie CJ, Huang X, Lee TJ, Tielens AGGM, Oomens J, Buma WJ. HIGH-RESOLUTION IR ABSORPTION SPECTROSCOPY of POLYCYCLIC AROMATIC HYDROCARBONS: The REALM of ANHARMONICITY Astrophysical Journal. 814. DOI: 10.1088/0004-637X/814/1/23  0.429
2015 Spezia R, Martens J, Oomens J, Song K. Collision-induced dissociation pathways of protonated Gly2NH2 and Gly3NH2 in the short time-scale limit by chemical dynamics and ion spectroscopy International Journal of Mass Spectrometry. 388: 40-52. DOI: 10.1016/J.Ijms.2015.07.025  0.398
2015 Martens JK, Grzetic J, Berden G, Oomens J. Gas-phase conformations of small polyprolines and their fragment ions by IRMPD spectroscopy International Journal of Mass Spectrometry. 377: 179-187. DOI: 10.1016/J.Ijms.2014.07.027  0.475
2015 Chang TM, Berden G, Oomens J, Williams ER. Halide anion binding to Gly3, Ala3 and Leu3 International Journal of Mass Spectrometry. 377: 440-447. DOI: 10.1016/J.Ijms.2014.02.019  0.452
2015 Rijs AM, Oomens J. Gas-Phase IR Spectroscopy and Structure of Biological Molecules Topics in Current Chemistry. DOI: 10.1007/978-3-319-19204-8  0.473
2015 Oomens J, Berden G, Morton TH. Negative hyperconjugation versus electronegativity: Vibrational spectra of free fluorinated alkoxide ions in the gas phase Chemphyschem. 16: 1992-1995. DOI: 10.1002/cphc.201500177  0.348
2014 Morsa D, Gabelica V, Rosu F, Oomens J, De Pauw E. Dissociation Pathways of Benzylpyridinium "Thermometer" Ions Depend on the Activation Regime: An IRMPD Spectroscopy Study. The Journal of Physical Chemistry Letters. 5: 3787-91. PMID 26278748 DOI: 10.1021/Jz501903B  0.434
2014 Wu RR, Yang B, Berden G, Oomens J, Rodgers MT. Gas-Phase Conformations and Energetics of Protonated 2'-Deoxyguanosine and Guanosine: IRMPD Action Spectroscopy and Theoretical Studies. The Journal of Physical Chemistry. B. PMID 25423364 DOI: 10.1021/jp508019a  0.34
2014 van Stipdonk MJ, Basu P, Dille SA, Gibson JK, Berden G, Oomens J. Infrared multiple photon dissociation spectroscopy of a gas-phase oxo-molybdenum complex with 1,2-dithiolene ligands. The Journal of Physical Chemistry. A. 118: 5407-18. PMID 24988369 DOI: 10.1021/Jp503222V  0.491
2014 Günther A, Nieto P, Berden G, Oomens J, Dopfer O. IRMPD spectroscopy of metalated flavins: Structure and bonding of M q+-lumichrome complexes (Mq+ = Li+-Cs +, Ag+, Mg2+) Physical Chemistry Chemical Physics. 16: 14161-14171. PMID 24905966 DOI: 10.1039/C4Cp01524J  0.443
2014 Langer J, Günther A, Seidenbecher S, Berden G, Oomens J, Dopfer O. Probing protonation sites of isolated flavins using IR spectroscopy: From lumichrome to the cofactor flavin mononucleotide Chemphyschem. 15: 2550-2562. PMID 24895155 DOI: 10.1002/Cphc.201402146  0.455
2014 Steill JD, May AL, Campagna SR, Oomens J, Compton RN. Structure and stability of phenoxide and fluorophenoxide anions investigated with infrared multiple-photon dissociation and detachment spectroscopy and tandem mass spectrometry. The Journal of Physical Chemistry. A. 118: 8597-605. PMID 24802281 DOI: 10.1021/Jp503103A  0.492
2014 Jaeqx S, Oomens J, Cimas A, Gaigeot MP, Rijs AM. Gas-phase peptide structures unraveled by far-IR spectroscopy: Combining IR-UV ion-dip experiments with born-oppenheimer molecular dynamics simulations Angewandte Chemie - International Edition. 53: 3663-3666. PMID 24574197 DOI: 10.1002/Anie.201311189  0.439
2014 van Stipdonk MJ, Kullman MJ, Berden G, Oomens J. Infrared multiple-photon dissociation spectroscopy of deprotonated 6-hydroxynicotinic acid. Rapid Communications in Mass Spectrometry : Rcm. 28: 691-8. PMID 24573799 DOI: 10.1002/Rcm.6829  0.491
2014 Gao J, Berden G, Oomens J. Laboratory infrared spectroscopy of gaseous negatively charged Polyaromatic hydrocarbons Astrophysical Journal. 787. DOI: 10.1088/0004-637X/787/2/170  0.472
2014 Van Stipdonk MJ, Patterson K, Gibson JK, Berden G, Oomens J. IRMPD spectroscopy reveals a novel rearrangement reaction for modified peptides that involves elimination of the N-terminal amino acid International Journal of Mass Spectrometry. DOI: 10.1016/J.Ijms.2015.01.010  0.374
2014 Patrick AL, Stedwell CN, Schindler B, Compagnon I, Berden G, Oomens J, Polfer NC. Insights into the fragmentation pathways of gas-phase protonated sulfoserine International Journal of Mass Spectrometry. DOI: 10.1016/J.Ijms.2014.12.001  0.474
2014 Ung HU, Huynh KT, Poutsma JC, Oomens J, Berden G, Morton TH. Investigation of proton affinities and gas phase vibrational spectra of protonated nucleosides, deoxynucleosides, and their analogs International Journal of Mass Spectrometry. DOI: 10.1016/J.Ijms.2014.09.017  0.479
2014 Kaczan CM, Rathur AI, Wu RR, Chen Y, Austin CA, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of sodium cationized halouracils: Effects of sodium cationization and halogenation on gas-phase conformation International Journal of Mass Spectrometry. DOI: 10.1016/J.Ijms.2014.07.016  0.533
2014 Holland MC, Berden G, Oomens J, Meijer AJHM, Schäfer M, Gilmour R. Infrared multiphoton dissociation spectroscopic analysis of noncovalent interactions in organocatalysis European Journal of Organic Chemistry. 2014: 5675-5680. DOI: 10.1002/Ejoc.201402845  0.432
2014 Jaeqx S, Oomens J, Cimas A, Gaigeot M, Rijs AM. Rücktitelbild: Gas-Phase Peptide Structures Unraveled by Far-IR Spectroscopy: Combining IR-UV Ion-Dip Experiments with Born-Oppenheimer Molecular Dynamics Simulations (Angew. Chem. 14/2014) Angewandte Chemie. 126: 3824-3824. DOI: 10.1002/Ange.201401109  0.434
2013 Demireva M, Oomens J, Berden G, Williams ER. The Ionic Hydrogen/Deuterium Bonds between Diammoniumalkane Dications and Halide Anions. Chempluschem. 78: 995-1004. PMID 31986747 DOI: 10.1002/Cplu.201300084  0.425
2013 Osburn S, Berden G, Oomens J, Gulyuz K, Polfer NC, O'Hair RAJ, Ryzhov V. Structure and Reactivity of the Glutathione Radical Cation: Radical Rearrangement from the Cysteine Sulfur to the Glutamic Acid α-Carbon Atom. Chempluschem. 78: 970-978. PMID 31986733 DOI: 10.1002/Cplu.201300057  0.358
2013 Yang B, Wu RR, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of proton-bound dimers of cytosine and modified cytosines: Effects of modifications on gas-phase conformations Journal of Physical Chemistry B. 117: 14191-14201. PMID 24151932 DOI: 10.1021/Jp405105W  0.506
2013 Ung HU, Moehlig AR, Kudla RA, Mueller LJ, Oomens J, Berden G, Morton TH. Proton-bound dimers of 1-methylcytosine and its derivatives: Vibrational and NMR spectroscopy Physical Chemistry Chemical Physics. 15: 19001-19012. PMID 24096726 DOI: 10.1039/C3Cp52260A  0.473
2013 Zhao J, Lau JKC, Grzetic J, Verkerk UH, Oomens J, Siu KWM, Hopkinson AC. Structures of a n*ions derived from protonated pentaglycine and pentaalanine: Results from IRMPD spectroscopy and DFT calculations Journal of the American Society For Mass Spectrometry. 24: 1957-1968. PMID 24026976 DOI: 10.1007/S13361-013-0728-4  0.349
2013 Jaeqx S, Oomens J, Rijs AM. Gas-phase salt bridge interactions between glutamic acid and arginine Physical Chemistry Chemical Physics. 15: 16341-16352. PMID 23999680 DOI: 10.1039/C3Cp52508B  0.41
2013 Yang B, Wu RR, Polfer NC, Berden G, Oomens J, Rodgers MT. IRMPD action spectroscopy of alkali metal cation-cytosine complexes: Effects of alkali metal cation size on gas phase conformation Journal of the American Society For Mass Spectrometry. 24: 1523-1533. PMID 23893433 DOI: 10.1007/S13361-013-0689-7  0.452
2013 Dain RP, Gresham G, Groenewold GS, Steill JD, Oomens J, Van Stipdonk MJ. Infrared multiple photon dissociation spectroscopy of group i and group II metal complexes with Boc-hydroxylamine Rapid Communications in Mass Spectrometry. 27: 1867-1872. PMID 23857932 DOI: 10.1002/Rcm.6640  0.463
2013 Grzetic J, Oomens J. Spectroscopic identification of cyclic imide b2-ions from peptides containing Gln and Asn residues Journal of the American Society For Mass Spectrometry. 24: 1228-1241. PMID 23722727 DOI: 10.1007/S13361-013-0661-6  0.479
2013 Dunbar RC, Oomens J, Berden G, Lau JK, Verkerk UH, Hopkinson AC, Siu KW. Metal ion complexes with HisGly: comparison with PhePhe and PheGly. The Journal of Physical Chemistry. A. 117: 5335-43. PMID 23705999 DOI: 10.1021/Jp4021917  0.473
2013 Lapoutre VJ, Redlich B, van der Meer AF, Oomens J, Bakker JM, Sweeney A, Mookherjee A, Armentrout PB. Structures of the dehydrogenation products of methane activation by 5d transition metal cations. The Journal of Physical Chemistry. A. 117: 4115-26. PMID 23586839 DOI: 10.1021/Jp400305K  0.466
2013 Piatkivskyi A, Osburn S, Jaderberg K, Grzetic J, Steill JD, Oomens J, Zhao J, Lau JKC, Verkerk UH, Hopkinson AC, Siu KWM, Ryzhov V. Structure and reactivity of the distonic and aromatic radical cations of tryptophan Journal of the American Society For Mass Spectrometry. 24: 513-523. PMID 23512424 DOI: 10.1007/S13361-013-0594-0  0.465
2013 Nieckarz RJ, Oomens J, Berden G, Sagulenko P, Zenobi R. Infrared multiple photon dissociation (IRMPD) spectroscopy of oxazine dyes Physical Chemistry Chemical Physics. 15: 5049-5056. PMID 23450155 DOI: 10.1039/C3Cp00158J  0.479
2013 Ung HU, Moehlig AR, Khodagholian S, Berden G, Oomens J, Morton TH. Proton-bridge motions in amine conjugate acid ions having intramolecular hydrogen bonds to hydroxyl and amine groups Journal of Physical Chemistry A. 117: 1360-1369. PMID 23311990 DOI: 10.1021/Jp311506Y  0.47
2013 Nei YW, Hallowita N, Steill JD, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of deprotonated DNA mononucleotides: Gas-phase conformations and energetics Journal of Physical Chemistry A. 117: 1319-1335. PMID 23289585 DOI: 10.1021/Jp3077936  0.417
2013 Gámez F, Hurtado P, Hortal AR, Martínez-Haya B, Berden G, Oomens J. Cations in a molecular funnel: Vibrational spectroscopy of isolated cyclodextrin complexes with alkali metals Chemphyschem. 14: 400-407. PMID 23239519 DOI: 10.1002/Cphc.201200810  0.439
2013 Jaeqx S, Du W, Meijer EJ, Oomens J, Rijs AM. Conformational study of Z-Glu-OH and Z-Arg-OH: Dispersion interactions versus conventional hydrogen bonding Journal of Physical Chemistry A. 117: 1216-1227. PMID 23095122 DOI: 10.1021/Jp3053339  0.487
2013 Dunbar RC, Steill JD, Polfer NC, Oomens J. Metal cation binding to gas-phase pentaalanine: divalent ions restructure the complex. The Journal of Physical Chemistry. A. 117: 1094-101. PMID 22928606 DOI: 10.1021/Jp304256F  0.456
2013 Osburn S, Burgie T, Berden G, Oomens J, O'Hair RAJ, Ryzhov V. Structure and reactivity of homocysteine radical cation in the gas phase studied by ion-molecule reactions and infrared multiple photon dissociation Journal of Physical Chemistry A. 117: 1144-1150. PMID 22920926 DOI: 10.1021/Jp304769Y  0.418
2013 Austin CA, Chen Y, Kaczan CM, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of alkali metal cation-cyclen complexes: Effects of alkali metal cation size on gas-phase conformation Dedicated to the memory of Detlef Schröder a great gas phase ion chemist, mass spectrometrist, friend, and colleague. International Journal of Mass Spectrometry. 354: 346-355. DOI: 10.1016/J.Ijms.2013.08.004  0.471
2013 Dunbar RC, Berden G, Oomens J. How does a small peptide choose how to bind a metal ion? IRMPD and computational survey of CS versus Iminol binding preferences International Journal of Mass Spectrometry. 354: 356-364. DOI: 10.1016/J.Ijms.2013.07.017  0.407
2013 Grzetic J, Oomens J. Effect of the Asn side chain on the dissociation of deprotonated peptides elucidated by IRMPD spectroscopy International Journal of Mass Spectrometry. 354: 70-77. DOI: 10.1016/J.Ijms.2013.05.005  0.488
2012 Almasian M, Grzetic J, van Maurik J, Steill JD, Berden G, Ingemann S, Buma WJ, Oomens J. Non-Equilibrium Isomer Distribution of the Gas-Phase Photoactive Yellow Protein Chromophore. The Journal of Physical Chemistry Letters. 3: 2259-63. PMID 26295780 DOI: 10.1021/Jz300780T  0.389
2012 Crampton KT, Rathur AI, Nei YW, Berden G, Oomens J, Rodgers MT. Protonation preferentially stabilizes minor tautomers of the halouracils: IRMPD action spectroscopy and theoretical studies Journal of the American Society For Mass Spectrometry. 23: 1469-1478. PMID 22821195 DOI: 10.1007/S13361-012-0434-7  0.504
2012 Tonner R, Schwerdtfeger P, May AL, Steill JD, Berden G, Oomens J, Campagna SR, Compton RN. Stability of gas-phase tartaric acid anions investigated by quantum chemistry, mass spectrometry, and infrared spectroscopy. The Journal of Physical Chemistry. A. 116: 4789-800. PMID 22486160 DOI: 10.1021/Jp3007156  0.473
2012 Dunbar RC, Steill JD, Polfer NC, Berden G, Oomens J. Peptide bond tautomerization induced by divalent metal ions: characterization of the iminol configuration. Angewandte Chemie (International Ed. in English). 51: 4591-3. PMID 22473902 DOI: 10.1002/Anie.201200437  0.428
2012 Verkerk UH, Zhao J, Saminathan IS, Lau JKC, Oomens J, Hopkinson AC, Siu KWM. Infrared multiple-photon dissociation spectroscopy of tripositive ions: Lanthanum-tryptophan complexes Inorganic Chemistry. 51: 4707-4710. PMID 22455512 DOI: 10.1021/Ic2026973  0.507
2012 Hurtado P, Gámez F, Hamad S, Martínez-Haya B, Steill JD, Oomens J. Multipodal coordination of a tetracarboxylic crown ether with NH4(+): a vibrational spectroscopy and computational study. The Journal of Chemical Physics. 136: 114301. PMID 22443758 DOI: 10.1063/1.3693518  0.455
2012 Brückmann L, Tyrra W, Mathur S, Berden G, Oomens J, Meijer AJHM, Schäfer M. Examination of the coordination sphere of Al III in trifluoromethyl-heteroarylalkenolato complex ions by gas-phase IRMPD spectroscopy and computational modelling Chemphyschem. 13: 2037-2045. PMID 22442004 DOI: 10.1002/Cphc.201200132  0.423
2012 Osburn S, Berden G, Oomens J, O'Hair RAJ, Ryzhov V. S-to-AC radical migration in the radical cations of gly-cys and cys-gly Journal of the American Society For Mass Spectrometry. 23: 1019-1023. PMID 22371052 DOI: 10.1007/S13361-012-0356-4  0.398
2012 Pirali O, Boudon V, Oomens J, Vervloet M. Rotationally resolved infrared spectroscopy of adamantane. The Journal of Chemical Physics. 136: 024310. PMID 22260582 DOI: 10.1063/1.3666853  0.44
2012 Citir M, Hinton CS, Oomens J, Steill JD, Armentrout PB. Infrared multiple photon dissociation spectroscopy of cationized histidine: effects of metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 116: 1532-41. PMID 22243283 DOI: 10.1021/Jp209636A  0.485
2012 Tirado M, Rutters J, Chen X, Yeung A, van Maarseveen J, Eyler JR, Berden G, Oomens J, Polfer NC. Disfavoring macrocycle b fragments by constraining torsional freedom: the "twisted" case of QWFGLM b6. Journal of the American Society For Mass Spectrometry. 23: 475-82. PMID 22219043 DOI: 10.1007/S13361-011-0315-5  0.373
2012 Thevis M, Beuck S, Höppner S, Thomas A, Held J, Schäfer M, Oomens J, Schänzer W. Structure elucidation of the diagnostic product ion at m/z 97 derived from androst-4-en-3-one-based steroids by ESI-CID and IRMPD spectroscopy. Journal of the American Society For Mass Spectrometry. 23: 537-46. PMID 22173925 DOI: 10.1007/S13361-011-0308-4  0.454
2012 Grzetic J, Oomens J. Spectroscopic evidence for an oxazolone structure in anionic b-type peptide fragments. Journal of the American Society For Mass Spectrometry. 23: 290-300. PMID 22170467 DOI: 10.1007/S13361-011-0297-3  0.464
2012 Alvaro Galué H, Oomens J. On the electronic structure of isolated mono-dehydrogenated polyaromatic hydrocarbon ions and their astrophysical relevance Astrophysical Journal. 746. DOI: 10.1088/0004-637X/746/1/83  0.504
2012 Dunbar RC, Polfer NC, Berden G, Oomens J. Metal ion binding to peptides: Oxygen or nitrogen sites? International Journal of Mass Spectrometry. 330: 71-77. DOI: 10.1016/J.Ijms.2012.10.006  0.435
2012 Contreras CS, Polfer NC, Oomens J, Steill JD, Bendiak B, Eyler JR. On the path to glycan conformer identification: Gas-phase study of the anomers of methyl glycosides of N-acetyl-d-glucosamine and N-acetyl-d- galactosamine International Journal of Mass Spectrometry. 330: 285-294. DOI: 10.1016/J.Ijms.2012.09.010  0.38
2012 Verkerk UH, Zhao J, Lau JKC, Lam TW, Hao Q, Steill JD, Siu CK, Oomens J, Hopkinson AC, Siu KWM. Structures of the a2 ions of Ala-Ala-Ala and Phe-Phe-Phe International Journal of Mass Spectrometry. 330: 254-261. DOI: 10.1016/J.Ijms.2012.08.034  0.458
2012 Almasian M, Grzetic J, Berden G, Bakker B, Buma WJ, Oomens J. Gas-phase infrared spectrum of the anionic GFP-chromophore International Journal of Mass Spectrometry. 330: 118-123. DOI: 10.1016/J.Ijms.2012.08.017  0.49
2012 Van Stipdonk M, Kullman M, Berden G, Oomens J. IRMPD and DFT study of the loss of water from protonated 2-hydroxynicotinic acid International Journal of Mass Spectrometry. 330: 134-143. DOI: 10.1016/J.Ijms.2012.06.026  0.462
2012 Citir M, Hinton CS, Oomens J, Steill JD, Armentrout PB. Infrared multiple photon dissociation spectroscopy of protonated histidine and 4-phenyl imidazole International Journal of Mass Spectrometry. 330: 6-15. DOI: 10.1016/J.Ijms.2012.06.002  0.507
2012 Grzetic J, Oomens J. Structure of anionic c-type peptide fragments elucidated by IRMPD spectroscopy International Journal of Mass Spectrometry. 316: 216-226. DOI: 10.1016/J.Ijms.2012.02.012  0.402
2012 Shek PYI, Lau JKC, Zhao J, Grzetic J, Verkerk UH, Oomens J, Hopkinson AC, Siu KWM. Fragmentations of protonated cyclic-glycylglycine and cyclic-alanylalanine International Journal of Mass Spectrometry. 316: 199-205. DOI: 10.1016/J.Ijms.2012.02.011  0.409
2012 Kullman MJ, Molesworth S, Berden G, Oomens J, Van Stipdonk M. IRMPD spectroscopy b 2 ions from protonated tripeptides with 4-aminomethyl benzoic acid residues International Journal of Mass Spectrometry. 316: 174-181. DOI: 10.1016/J.Ijms.2012.01.008  0.405
2012 Zou S, Oomens J, Polfer NC. Competition between diketopiperazine and oxazolone formation in water loss products from protonated ArgGly and GlyArg International Journal of Mass Spectrometry. 316: 12-17. DOI: 10.1016/J.Ijms.2011.12.020  0.491
2012 Gámez F, Hurtado P, Hamad S, Martínez-Haya B, Berden G, Oomens J. Tweezer-like complexes of crown ethers with divalent metals: Probing cation-size-dependent conformations by vibrational spectroscopy in the gas phase Chempluschem. 77: 118-123. DOI: 10.1002/Cplu.201100044  0.427
2011 Chen X, Tirado M, Steill JD, Oomens J, Polfer NC. Cyclic peptide as reference system for b ion structural analysis in the gas phase. Journal of Mass Spectrometry : Jms. 46: 1011-5. PMID 22012667 DOI: 10.1002/Jms.1982  0.366
2011 Beran GJ, Chronister EL, Daemen LL, Moehlig AR, Mueller LJ, Oomens J, Rice A, Santiago-Dieppa DR, Tham FS, Theel K, Yaghmaei S, Morton TH. Vibrations of a chelated proton in a protonated tertiary diamine. Physical Chemistry Chemical Physics : Pccp. 13: 20380-92. PMID 21993532 DOI: 10.1039/C1Cp22065A  0.419
2011 Fales BS, Fujamade NO, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy and theoretical studies of triethyl phosphate complexes: effects of protonation and sodium cationization on structure. Journal of the American Society For Mass Spectrometry. 22: 1862-71. PMID 21952899 DOI: 10.1007/s13361-011-0208-7  0.443
2011 Osburn S, Berden G, Oomens J, O'Hair RA, Ryzhov V. Structure and reactivity of the N-acetyl-cysteine radical cation and anion: does radical migration occur? Journal of the American Society For Mass Spectrometry. 22: 1794-803. PMID 21952893 DOI: 10.1007/S13361-011-0198-5  0.418
2011 Hofstetter TE, Howder C, Berden G, Oomens J, Armentrout PB. Structural elucidation of biological and toxicological complexes: investigation of monomeric and dimeric complexes of histidine with multiply charged transition metal (Zn and Cd) cations using IR action spectroscopy. The Journal of Physical Chemistry. B. 115: 12648-61. PMID 21932771 DOI: 10.1021/Jp207294B  0.448
2011 Brown DJ, Stefan SE, Berden G, Steill JD, Oomens J, Eyler JR, Bendiak B. Direct evidence for the ring opening of monosaccharide anions in the gas phase: photodissociation of aldohexoses and aldohexoses derived from disaccharides using variable-wavelength infrared irradiation in the carbonyl stretch region. Carbohydrate Research. 346: 2469-81. PMID 21906727 DOI: 10.1016/J.Carres.2011.06.018  0.507
2011 Yao H, Steill JD, Oomens J, Jockusch RA. Infrared multiple photon dissociation action spectroscopy and computational studies of mass-selected gas-phase fluorescein and 2',7'-dichlorofluorescein ions. The Journal of Physical Chemistry. A. 115: 9739-47. PMID 21800861 DOI: 10.1021/Jp201946A  0.484
2011 Lagutschenkov A, Langer J, Berden G, Oomens J, Dopfer O. Infrared spectra of the protonated neurotransmitter histamine: competition between imidazolium and ammonium isomers in the gas phase. Physical Chemistry Chemical Physics : Pccp. 13: 15644-56. PMID 21799964 DOI: 10.1039/C1Cp21681C  0.539
2011 Massah AR, Dreiocker F, Jackson RF, Pickup BT, Oomens J, Meijer AJ, Schäfer M. Gas-phase study of new organozinc reagents by IRMPD-spectroscopy, computational modelling and tandem-MS. Physical Chemistry Chemical Physics : Pccp. 13: 13255-67. PMID 21698303 DOI: 10.1039/C1Cp20747D  0.488
2011 Galué HA, Oomens J. Spectroscopic evidence for a triplet ground state in the naphthyl cation. Angewandte Chemie (International Ed. in English). 50: 7004-7. PMID 21688375 DOI: 10.1002/Anie.201102333  0.311
2011 Dain RP, Gresham G, Groenewold GS, Steill JD, Oomens J, van Stipdonk MJ. Infrared multiple-photon dissociation spectroscopy of group II metal complexes with salicylate. Rapid Communications in Mass Spectrometry : Rcm. 25: 1837-46. PMID 21638359 DOI: 10.1002/Rcm.5053  0.461
2011 van Zundert GC, Jaeqx S, Berden G, Bakker JM, Kleinermanns K, Oomens J, Rijs AM. IR spectroscopy of isolated neutral and protonated adenine and 9-methyladenine. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 12: 1921-7. PMID 21618380 DOI: 10.1002/Cphc.201100133  0.501
2011 Verkerk UH, Zhao J, Van Stipdonk MJ, Bythell BJ, Oomens J, Hopkinson AC, Siu KW. Structure of the [M + H - H2O]+ ion from tetraglycine: a revisit by means of density functional theory and isotope labeling. The Journal of Physical Chemistry. A. 115: 6683-7. PMID 21595464 DOI: 10.1021/Jp202820H  0.43
2011 Cooper TE, Carl DR, Oomens J, Steill JD, Armentrout PB. Infrared spectroscopy of divalent zinc and cadmium crown ether systems. The Journal of Physical Chemistry. A. 115: 5408-22. PMID 21561140 DOI: 10.1021/Jp202646Y  0.46
2011 Dunbar RC, Steill JD, Oomens J. Encapsulation of metal cations by the PhePhe ligand: a cation-π ion cage. Journal of the American Chemical Society. 133: 9376-86. PMID 21553844 DOI: 10.1021/Ja200219Q  0.481
2011 Rummel JL, Steill JD, Oomens J, Contreras CS, Pearson WL, Szczepanski J, Powell DH, Eyler JR. Structural elucidation of direct analysis in real time ionized nerve agent simulants with infrared multiple photon dissociation spectroscopy. Analytical Chemistry. 83: 4045-52. PMID 21491962 DOI: 10.1021/Ac102973A  0.485
2011 Oomens J, Morton TH. Aldehyde and ketone adducts of the gaseous trifluoromethyl cation. Organic Letters. 13: 2176-9. PMID 21488629 DOI: 10.1021/Ol200369M  0.48
2011 Fales BS, Fujamade NO, Nei YW, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy and theoretical studies of diethyl phosphate complexes: effects of protonation and sodium cationization on structure. Journal of the American Society For Mass Spectrometry. 22: 81-92. PMID 21472547 DOI: 10.1007/S13361-010-0007-6  0.53
2011 Prell JS, Chang TM, Biles JA, Berden G, Oomens J, Williams ER. Isomer population analysis of gaseous ions from infrared multiple photon dissociation kinetics. The Journal of Physical Chemistry. A. 115: 2745-51. PMID 21410158 DOI: 10.1021/Jp2004166  0.428
2011 Hurtado P, Gámez F, Hamad S, Martínez-Haya B, Steill JD, Oomens J. Crown ether complexes with H₃O⁺ and NH₄⁺: proton localization and proton bridge formation. The Journal of Physical Chemistry. A. 115: 7275-82. PMID 21410156 DOI: 10.1021/Jp200481W  0.38
2011 Giorgi G, Ceraulo L, Berden G, Oomens J, Liveri VT. Gas phase infrared multiple photon dissociation spectra of positively charged sodium bis(2-ethylhexyl)sulfosuccinate reverse micelle-like aggregates. The Journal of Physical Chemistry. B. 115: 2282-6. PMID 21341816 DOI: 10.1021/Jp110941P  0.365
2011 Ross AJ, Dreiocker F, Schäfer M, Oomens J, Meijer AJ, Pickup BT, Jackson RF. Evidence for the role of tetramethylethylenediamine in aqueous Negishi cross-coupling: synthesis of nonproteinogenic phenylalanine derivatives on water. The Journal of Organic Chemistry. 76: 1727-34. PMID 21319826 DOI: 10.1021/Jo102334C  0.45
2011 Alvaro Galué H, Rice CA, Steill JD, Oomens J. Infrared spectroscopy of ionized corannulene in the gas phase. The Journal of Chemical Physics. 134: 054310. PMID 21303123 DOI: 10.1063/1.3540661  0.53
2011 Steill JD, Szczepanski J, Oomens J, Eyler JR, Brajter-Toth A. Structural characterization by infrared multiple photon dissociation spectroscopy of protonated gas-phase ions obtained by electrospray ionization of cysteine and dopamine. Analytical and Bioanalytical Chemistry. 399: 2463-73. PMID 21271241 DOI: 10.1007/S00216-010-4582-Y  0.507
2011 Osburn S, Steill JD, Oomens J, O'Hair RA, van Stipdonk M, Ryzhov V. Structure and reactivity of the cysteine methyl ester radical cation. Chemistry (Weinheim An Der Bergstrasse, Germany). 17: 873-9. PMID 21226102 DOI: 10.1002/Chem.201002042  0.452
2011 Dunbar RC, Steill JD, Oomens J. Chirality-induced conformational preferences in peptide-metal ion binding revealed by IR spectroscopy. Journal of the American Chemical Society. 133: 1212-5. PMID 21192647 DOI: 10.1021/Ja109045J  0.465
2011 Lagutschenkov A, Langer J, Berden G, Oomens J, Dopfer O. Infrared spectra of protonated neurotransmitters: dopamine. Physical Chemistry Chemical Physics : Pccp. 13: 2815-23. PMID 21152614 DOI: 10.1039/C0Cp02133D  0.496
2011 Bakker JM, Redlich B, Van Der Meer AFG, Oomens J. Infrared spectroscopy of gas-phase polycyclic aromatic hydrocarbon cations in the 1050 μm spectral range Astrophysical Journal. 741. DOI: 10.1088/0004-637X/741/2/74  0.496
2011 Szczepanski J, Oomens J, Steill JD, Vala MT. H2 ejection from polycyclic aromatic hydrocarbons: Infrared multiphoton dissociation study of protonated acenaphthene and 9,10-dihydrophenanthrene Astrophysical Journal. 727. DOI: 10.1088/0004-637X/727/1/12  0.402
2011 Oomens J. Laboratory infrared spectroscopy of PAHs Eas Publications Series. 46: 61-73. DOI: 10.1051/Eas/1146007  0.415
2011 Dunbar RC, Oomens J, Orlova G, Bohme DK. IRMPD spectroscopic investigation of gas-phase complexes of deprotonated penicillin G with Ba 2+, Zn 2+ and Cd 2+ International Journal of Mass Spectrometry. 308: 330-337. DOI: 10.1016/J.Ijms.2011.08.018  0.526
2011 Steill JD, Oomens J. Spectroscopically resolved competition between dissociation and detachment from nitrobenzene radical anion International Journal of Mass Spectrometry. 308: 239-252. DOI: 10.1016/J.Ijms.2011.08.001  0.443
2011 Oomens J, Morton TH. Fluoronium metathesis and rearrangements of fluorine-stabilized carbocations International Journal of Mass Spectrometry. 308: 232-238. DOI: 10.1016/J.Ijms.2011.07.024  0.395
2011 Nei YW, Akinyemi TE, Kaczan CM, Steill JD, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of sodiated uracil and thiouracils: Effects of thioketo-substitution on gas-phase conformation International Journal of Mass Spectrometry. 308: 191-202. DOI: 10.1016/J.Ijms.2011.06.019  0.461
2011 Gámez F, Hurtado P, Martínez-Haya B, Berden G, Oomens J. Vibrational study of isolated 18-crown-6 ether complexes with alkaline-earth metal cations International Journal of Mass Spectrometry. 308: 217-224. DOI: 10.1016/J.Ijms.2011.06.015  0.43
2011 Vala M, Szczepanski J, Oomens J. Formation of molecular hydrogen from protonated 9,10-dihydroanthracene: Is the ejected H2 rotationally and vibrationally excited? International Journal of Mass Spectrometry. 308: 181-190. DOI: 10.1016/J.Ijms.2011.06.008  0.469
2011 Groenewold GS, Van Stipdonk MJ, Oomens J, De Jong WA, McIlwain ME. The gas-phase bis-uranyl nitrate complex [(UO2) 2(NO3)5]-: Infrared spectrum and structure International Journal of Mass Spectrometry. 308: 175-180. DOI: 10.1016/J.Ijms.2011.06.002  0.445
2010 Lagutschenkov A, Langer J, Berden G, Oomens J, Dopfer O. Infrared spectra of protonated neurotransmitters: serotonin. The Journal of Physical Chemistry. A. 114: 13268-76. PMID 21090669 DOI: 10.1021/Jp109337A  0.538
2010 Dunbar RC, Steill JD, Oomens J. Cationized phenylalanine conformations characterized by IRMPD and computation for singly and doubly charged ions. Physical Chemistry Chemical Physics : Pccp. 12: 13383-93. PMID 20820591 DOI: 10.1039/C0Cp00784F  0.484
2010 Li X, Oomens J, Eyler JR, Moore DT, Iyengar SS. Isotope dependent, temperature regulated, energy repartitioning in a low-barrier, short-strong hydrogen bonded cluster. The Journal of Chemical Physics. 132: 244301. PMID 20590187 DOI: 10.1063/1.3430525  0.356
2010 Oomens J, Steill JD, Morton TH. IR spectra of boron-stabilized anions in the gas phase. Inorganic Chemistry. 49: 6781-3. PMID 20583791 DOI: 10.1021/Ic1005874  0.434
2010 Martínez-Haya B, Hurtado P, Hortal AR, Hamad S, Steill JD, Oomens J. Emergence of symmetry and chirality in crown ether complexes with alkali metal cations. The Journal of Physical Chemistry. A. 114: 7048-54. PMID 20536193 DOI: 10.1021/Jp103389G  0.351
2010 Oomens J, Morton TH. Structures of products from positive ion-molecule reactions by means of vibrational spectroscopy. European Journal of Mass Spectrometry (Chichester, England). 16: 313-9. PMID 20530838 DOI: 10.1255/Ejms.1060  0.47
2010 Rijs AM, Sändig N, Blom MN, Oomens J, Hannam JS, Leigh DA, Zerbetto F, Buma WJ. Controlled hydrogen-bond breaking in a rotaxane by discrete solvation. Angewandte Chemie (International Ed. in English). 49: 3896-900. PMID 20480499 DOI: 10.1002/Anie.201001231  0.304
2010 Palii SP, Contreras CS, Steill JD, Palii SS, Oomens J, Eyler JR. Triuret as a potential hypokalemic agent: Structure characterization of triuret and triuret-alkali metal adducts by mass spectrometric techniques. Archives of Biochemistry and Biophysics. 498: 23-34. PMID 20371222 DOI: 10.1016/J.Abb.2010.03.023  0.421
2010 Bythell BJ, Dain RP, Curtice SS, Oomens J, Steill JD, Groenewold GS, Paizs B, Van Stipdonk MJ. Structure of [M + H - H(2)O](+) from protonated tetraglycine revealed by tandem mass spectrometry and IRMPD spectroscopy. The Journal of Physical Chemistry. A. 114: 5076-82. PMID 20353201 DOI: 10.1021/Jp9113046  0.388
2010 Carl DR, Cooper TE, Oomens J, Steill JD, Armentrout PB. Infrared multiple photon dissociation spectroscopy of cationized methionine: effects of alkali-metal cation size on gas-phase conformation. Physical Chemistry Chemical Physics : Pccp. 12: 3384-98. PMID 20352675 DOI: 10.1039/B919039B  0.516
2010 Chen X, Steill JD, Oomens J, Polfer NC. Oxazolone versus macrocycle structures for Leu-enkephalin b2-b4: insights from infrared multiple-photon dissociation spectroscopy and gas-phase hydrogen/deuterium exchange. Journal of the American Society For Mass Spectrometry. 21: 1313-21. PMID 20236836 DOI: 10.1016/J.Jasms.2010.02.022  0.362
2010 Ard S, Mirsaleh-Kohan N, Steill JD, Oomens J, Nielsen SB, Compton RN. Dissociation of dicarboxylate and disulfonate dianions. The Journal of Chemical Physics. 132: 094301. PMID 20210392 DOI: 10.1063/1.3292577  0.434
2010 Rijs AM, Ohanessian G, Oomens J, Meijer G, Von Helden G, Compagnon I. Internal proton transfer leading to stable zwitterionic structures in a neutral isolated peptide Angewandte Chemie - International Edition. 49: 2332-2335. PMID 20191644 DOI: 10.1002/Anie.200906503  0.324
2010 Groenewold GS, de Jong WA, Oomens J, Van Stipdonk MJ. Variable denticity in carboxylate binding to the uranyl coordination complexes. Journal of the American Society For Mass Spectrometry. 21: 719-27. PMID 20188585 DOI: 10.1016/J.Jasms.2010.01.021  0.51
2010 Oomens J, Steill JD. The structure of deprotonated tri-alanine and its a3- fragment anion by IR spectroscopy. Journal of the American Society For Mass Spectrometry. 21: 698-706. PMID 20181492 DOI: 10.1016/J.Jasms.2010.01.004  0.496
2010 Bakker JM, Lapoutre VJ, Redlich B, Oomens J, Sartakov BG, Fielicke A, von Helden G, Meijer G, van der Meer AF. Intensity-resolved IR multiple photon ionization and fragmentation of C60. The Journal of Chemical Physics. 132: 074305. PMID 20170225 DOI: 10.1063/1.3313926  0.41
2010 Kupser P, Pagel K, Oomens J, Polfer N, Koksch B, Meijer G, von Helden G. Amide-I and -II vibrations of the cyclic beta-sheet model peptide gramicidin S in the gas phase. Journal of the American Chemical Society. 132: 2085-93. PMID 20092340 DOI: 10.1021/Ja909842J  0.421
2010 Dreiocker F, Oomens J, Meijer AJ, Pickup BT, Jackson RF, Schäfer M. Structure elucidation of dimethylformamide-solvated alkylzinc cations in the gas phase. The Journal of Organic Chemistry. 75: 1203-13. PMID 20088578 DOI: 10.1021/Jo902492Z  0.448
2010 Dain RP, Leavitt CM, Oomens J, Steill JD, Groenewold GS, Van Stipdonk MJ. Infrared multiple photon dissociation spectroscopy of sodium and potassium chlorate anions. Rapid Communications in Mass Spectrometry : Rcm. 24: 232-8. PMID 20014046 DOI: 10.1002/Rcm.4379  0.49
2010 Prell JS, Flick TG, Oomens J, Berden G, Williams ER. Coordination of trivalent metal cations to peptides: results from IRMPD spectroscopy and theory. The Journal of Physical Chemistry. A. 114: 854-60. PMID 19950916 DOI: 10.1021/Jp909366A  0.424
2010 Alvaro Galué H, Pirali O, Oomens J. Gas-phase infrared spectra of cationized nitrogen-substituted polycyclic aromatic hydrocarbons Astronomy and Astrophysics. 517. DOI: 10.1051/0004-6361/201014050  0.518
2010 Verkerk UH, Siu C, Steill JD, El Aribi H, Zhao J, Rodriquez CF, Oomens J, Hopkinson AC, Siu KWM. a2 Ion Derived from Triglycine: An N1-Protonated 4-Imidazolidinone The Journal of Physical Chemistry Letters. 1: 868-872. DOI: 10.1021/Jz900464A  0.442
2010 Oomens J, Moehlig AR, Morton TH. Infrared multiple photon dissociation (IRMPD) spectroscopy of the proton-bound dimer of 1-methylcytosine in the gas phase Journal of Physical Chemistry Letters. 1: 2891-2897. DOI: 10.1021/Jz101080X  0.518
2010 Contreras CS, Polfer NC, Chung AC, Oomens J, Eyler JR. Hydrogen/deuterium exchange of phenylalanine analogs studied with infrared multiple photon dissociation International Journal of Mass Spectrometry. 297: 162-169. DOI: 10.1016/J.Ijms.2010.08.019  0.45
2010 Nei YW, Akinyemi TE, Steill JD, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of protonated uracil and thiouracils: Effects of thioketo-substitution on gas-phase conformation International Journal of Mass Spectrometry. 297: 139-151. DOI: 10.1016/j.ijms.2010.08.005  0.304
2010 O'Brien JT, Prell JS, Berden G, Oomens J, Williams ER. Effects of anions on the zwitterion stability of Glu, His and Arg investigated by IRMPD spectroscopy and theory International Journal of Mass Spectrometry. 297: 116-123. DOI: 10.1016/J.Ijms.2010.07.003  0.455
2010 Dunbar RC, Steill JD, Oomens J. Conformations and vibrational spectroscopy of metal-ion/polylalanine complexes International Journal of Mass Spectrometry. 297: 107-115. DOI: 10.1016/J.Ijms.2010.07.001  0.494
2010 Groenewold GS, van Stipdonk MJ, Oomens J, de Jong WA, Gresham GL, McIlwain ME. Vibrational spectra of discrete UO2 2+ halide complexes in the gas phase International Journal of Mass Spectrometry. 297: 67-75. DOI: 10.1016/J.Ijms.2010.06.013  0.446
2010 Pirali O, Alvaro Galué H, Dahl JE, Carlson RMK, Oomens J. Infrared spectra and structures of diamantyl and triamantyl carbocations International Journal of Mass Spectrometry. 297: 55-62. DOI: 10.1016/J.Ijms.2010.05.018  0.481
2010 Drayß MK, Armentrout PB, Oomens J, Schäfer M. IR spectroscopy of cationized aliphatic amino acids: Stability of charge-solvated structure increases with metal cation size International Journal of Mass Spectrometry. 297: 18-27. DOI: 10.1016/J.Ijms.2010.04.010  0.442
2010 Citir M, Stennett EMS, Oomens J, Steill JD, Rodgers MT, Armentrout PB. Infrared multiple photon dissociation spectroscopy of cationized cysteine: Effects of metal cation size on gas-phase conformation International Journal of Mass Spectrometry. 297: 9-17. DOI: 10.1016/J.Ijms.2010.04.009  0.508
2009 Chen X, Yu L, Steill JD, Oomens J, Polfer NC. Effect of peptide fragment size on the propensity of cyclization in collision-induced dissociation: oligoglycine b(2)-b(8). Journal of the American Chemical Society. 131: 18272-82. PMID 19947633 DOI: 10.1021/Ja9030837  0.396
2009 Zhao D, Langer J, Oomens J, Dopfer O. Infrared spectra of protonated polycyclic aromatic hydrocarbon molecules: azulene. The Journal of Chemical Physics. 131: 184307. PMID 19916604 DOI: 10.1063/1.3262720  0.483
2009 Compagnon I, Oomens J, Bakker J, Meijer G, von Helden G. Vibrational spectroscopy of a non-aromatic amino acid-based model peptide: identification of the gamma-turn motif of the peptide backbone. Physical Chemistry Chemical Physics : Pccp. 7: 13-5. PMID 19785168 DOI: 10.1039/B417204C  0.38
2009 Steill JD, Oomens J. Gas-phase deprotonation of p-hydroxybenzoic acid investigated by IR spectroscopy: solution-phase structure is retained upon ESI. Journal of the American Chemical Society. 131: 13570-1. PMID 19731908 DOI: 10.1021/Ja903877V  0.364
2009 Molesworth S, Leavitt CM, Groenewold GS, Oomens J, Steill JD, van Stipdonk M. Spectroscopic evidence for mobilization of amide position protons during CID of model peptide ions. Journal of the American Society For Mass Spectrometry. 20: 1841-5. PMID 19648027 DOI: 10.1016/J.Jasms.2009.06.007  0.393
2009 Drayss MK, Blunk D, Oomens J, Gao B, Wyttenbach T, Bowers MT, Schäfer M. Systematic study of the structures of potassiated tertiary amino acids: salt bridge structures dominate. The Journal of Physical Chemistry. A. 113: 9543-50. PMID 19637898 DOI: 10.1021/Jp903036T  0.487
2009 Groenewold GS, Leavitt CM, Dain RP, Oomens J, Steill JD, van Stipdonk MJ. Infrared spectrum of potassium-cationized triethylphosphate generated using tandem mass spectrometry and infrared multiple photon dissociation. Rapid Communications in Mass Spectrometry : Rcm. 23: 2706-10. PMID 19630032 DOI: 10.1002/Rcm.4162  0.432
2009 Prell JS, O'Brien JT, Steill JD, Oomens J, Williams ER. Structures of protonated dipeptides: the role of arginine in stabilizing salt bridges. Journal of the American Chemical Society. 131: 11442-9. PMID 19624125 DOI: 10.1021/Ja901870D  0.455
2009 Dunbar RC, Steill JD, Polfer NC, Oomens J. Peptide length, steric effects, and ion solvation govern zwitterion stabilization in barium-chelated di- and tripeptides. The Journal of Physical Chemistry. B. 113: 10552-4. PMID 19606889 DOI: 10.1021/Jp905060N  0.416
2009 Dunbar RC, Hopkinson AC, Oomens J, Siu CK, Siu KW, Steill JD, Verkerk UH, Zhao J. Conformation switching in gas-phase complexes of histidine with alkaline earth ions. The Journal of Physical Chemistry. B. 113: 10403-8. PMID 19580301 DOI: 10.1021/Jp903064W  0.481
2009 Martínez-Haya B, Hurtado P, Hortal AR, Steill JD, Oomens J, Merkling PJ. Spectroscopic investigation of the gas-phase conformations of 15-crown-5 ether complexes with K+. The Journal of Physical Chemistry. A. 113: 7748-52. PMID 19518056 DOI: 10.1021/Jp902150V  0.431
2009 Heaton AL, Bowman VN, Oomens J, Steill JD, Armentrout PB. Infrared multiple photon dissociation spectroscopy of cationized asparagine: effects of metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 113: 5519-30. PMID 19368405 DOI: 10.1021/jp9008064  0.391
2009 Vala M, Szczepanski J, Oomens J, Steill JD. H(2) ejection from polycyclic aromatic hydrocarbons: infrared multiphoton dissociation study of protonated 1,2-dihydronaphthalene. Journal of the American Chemical Society. 131: 5784-91. PMID 19348486 DOI: 10.1021/Ja808965X  0.478
2009 Steill JD, Oomens J. Action spectroscopy of gas-phase carboxylate anions by multiple photon IR electron detachment/attachment. The Journal of Physical Chemistry. A. 113: 4941-6. PMID 19344110 DOI: 10.1021/Jp807710Y  0.458
2009 Oomens J, Steill JD, Redlich B. Gas-phase IR spectroscopy of deprotonated amino acids. Journal of the American Chemical Society. 131: 4310-9. PMID 19267428 DOI: 10.1021/Ja807615V  0.505
2009 O'Brien JT, Prell JS, Steill JD, Oomens J, Williams ER. Changes in binding motif of protonated heterodimers containing valine and amines investigated using IRMPD spectroscopy between 800 and 3700 cm(-1) and theory. Journal of the American Chemical Society. 131: 3905-12. PMID 19256491 DOI: 10.1021/Ja809928H  0.474
2009 Polfer NC, Oomens J. Vibrational spectroscopy of bare and solvated ionic complexes of biological relevance. Mass Spectrometry Reviews. 28: 468-94. PMID 19241457 DOI: 10.1002/Mas.20215  0.535
2009 Leavitt CM, Oomens J, Dain RP, Steill J, Groenewold GS, Van Stipdonk MJ. IRMPD spectroscopy of anionic group II metal nitrate cluster ions. Journal of the American Society For Mass Spectrometry. 20: 772-82. PMID 19201616 DOI: 10.1016/J.Jasms.2008.12.023  0.498
2009 Rijs AM, Compagnon I, Oomens J, Hannam JS, Leigh DA, Buma WJ. Stiff, and sticky in the right places: binding interactions in isolated mechanically interlocked molecules probed by mid-infrared spectroscopy. Journal of the American Chemical Society. 131: 2428-9. PMID 19199633 DOI: 10.1021/Ja808788C  0.409
2009 Bush MF, Oomens J, Williams ER. Proton affinity and zwitterion stability: new results from infrared spectroscopy and theory of cationized lysine and analogues in the gas phase. The Journal of Physical Chemistry. A. 113: 431-8. PMID 19128186 DOI: 10.1021/Jp807470P  0.45
2009 Dunbar RC, Steill JD, Polfer NC, Oomens J. Dimeric complexes of tryptophan with M2+ metal ions. The Journal of Physical Chemistry. A. 113: 845-51. PMID 19123780 DOI: 10.1021/Jp8087176  0.418
2009 Prell JS, Demireva M, Oomens J, Williams ER. Role of sequence in salt-bridge formation for alkali metal cationized GlyArg and ArgGly investigated with IRMPD spectroscopy and theory. Journal of the American Chemical Society. 131: 1232-42. PMID 19117387 DOI: 10.1021/Ja808177Z  0.446
2009 Oomens J, Young S, Molesworth S, van Stipdonk M. Spectroscopic evidence for an oxazolone structure of the b(2) fragment ion from protonated tri-alanine. Journal of the American Society For Mass Spectrometry. 20: 334-9. PMID 19013079 DOI: 10.1016/J.Jasms.2008.10.012  0.455
2009 Drayss MK, Blunk D, Oomens J, Schäfer M. Infrared multiple photon dissociation spectroscopy of potassiated proline. The Journal of Physical Chemistry. A. 112: 11972-4. PMID 18983130 DOI: 10.1021/Jp809111B  0.46
2009 Knorke H, Langer J, Oomens J, Dopfer O. INFRARED SPECTRA OF ISOLATED PROTONATED POLYCYCLIC AROMATIC HYDROCARBON MOLECULES The Astrophysical Journal. 706: L66-L70. DOI: 10.1088/0004-637X/706/1/L66  0.521
2009 Pagel K, Kupser P, Bierau F, Polfer NC, Steill JD, Oomens J, Meijer G, Koksch B, von Helden G. Gas-phase IR spectra of intact α-helical coiled coil protein complexes International Journal of Mass Spectrometry. 283: 161-168. DOI: 10.1016/J.Ijms.2009.02.026  0.441
2009 Dunbar RC, Steill JD, Polfer NC, Oomens J. Gas-phase infrared spectroscopy of the protonated dipeptides H+PheAla and H+AlaPhe compared to condensed-phase results International Journal of Mass Spectrometry. 283: 77-84. DOI: 10.1016/J.Ijms.2009.02.001  0.442
2009 Drayß MK, Blunk D, Oomens J, Polfer N, Schmuck C, Gao B, Wyttenbach T, Bowers MT, Schäfer M. Gas-phase structures of solution-phase zwitterions: Charge solvation or salt bridge? International Journal of Mass Spectrometry. 281: 97-100. DOI: 10.1016/J.Ijms.2008.12.011  0.515
2009 Vala M, Szczepanski J, Dunbar R, Oomens J, Steill JD. Infrared multiphoton dissociation spectrum of isolated protonated 1-azapyrene Chemical Physics Letters. 473: 43-48. DOI: 10.1016/J.Cplett.2009.03.061  0.48
2008 Steill JD, Oomens J, Eyler JR, Compton RN. Gas-phase infrared multiple photon dissociation spectroscopy of isolated SF6- and SF5- anions. The Journal of Chemical Physics. 129: 244302. PMID 19123502 DOI: 10.1063/1.3036977  0.475
2008 Kupser P, Steill JD, Oomens J, Meijer G, von Helden G. IR spectroscopy of gas-phase C60-. Physical Chemistry Chemical Physics : Pccp. 10: 6862-6. PMID 19015792 DOI: 10.1039/B811862K  0.444
2008 Steill J, Zhao J, Siu CK, Ke Y, Verkerk UH, Oomens J, Dunbar RC, Hopkinson AC, Siu KW. Structure of the observable histidine radical cation in the gas phase: a captodative alpha-radical ion. Angewandte Chemie (International Ed. in English). 47: 9666-8. PMID 19003842 DOI: 10.1002/Anie.200804101  0.383
2008 Vaden TD, Gowers SA, de Boer TS, Steill JD, Oomens J, Snoek LC. Conformational preferences of an amyloidogenic peptide: IR spectroscopy of Ac-VQIVYK-NHMe. Journal of the American Chemical Society. 130: 14640-50. PMID 18844349 DOI: 10.1021/Ja804213S  0.395
2008 Oomens J, Kraka E, Nguyen MK, Morton TH. Structure, vibrational spectra, and unimolecular dissociation of gaseous 1-fluoro-1-phenethyl cations. The Journal of Physical Chemistry. A. 112: 10774-83. PMID 18831543 DOI: 10.1021/Jp804706Z  0.489
2008 O'Brien JT, Prell JS, Steill JD, Oomens J, Williams ER. Interactions of mono- and divalent metal ions with aspartic and glutamic acid investigated with IR photodissociation spectroscopy and theory. The Journal of Physical Chemistry. A. 112: 10823-30. PMID 18828579 DOI: 10.1021/Jp805787E  0.437
2008 Simon A, Joblin C, Polfer N, Oomens J. Infrared spectroscopy of [XFeC24H12]+ (X = C5H5, C5(CH3)5) complexes in the gas phase: experimental and computational studies of astrophysical interest. The Journal of Physical Chemistry. A. 112: 8551-60. PMID 18729347 DOI: 10.1021/Jp801517Q  0.463
2008 Bush MF, Oomens J, Saykally RJ, Williams ER. Alkali metal ion binding to glutamine and glutamine derivatives investigated by infrared action spectroscopy and theory. The Journal of Physical Chemistry. A. 112: 8578-84. PMID 18714968 DOI: 10.1021/Jp803121W  0.448
2008 Van Stipdonk MJ, Kerstetter DR, Leavitt CM, Groenewold GS, Steill J, Oomens J. Spectroscopic investigation of H atom transfer in a gas-phase dissociation reaction: McLafferty rearrangement of model gas-phase peptide ions. Physical Chemistry Chemical Physics : Pccp. 10: 3209-21. PMID 18500397 DOI: 10.1039/B802314J  0.45
2008 Groenewold GS, Van Stipdonk MJ, de Jong WA, Oomens J, Gresham GL, McIlwain ME, Gao D, Siboulet B, Visscher L, Kullman M, Polfer N. Infrared spectroscopy of dioxouranium(V) complexes with solvent molecules: effect of reduction. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 9: 1278-85. PMID 18478514 DOI: 10.1002/Cphc.200800034  0.415
2008 Bush MF, Oomens J, Saykally RJ, Williams ER. Effects of alkaline earth metal ion complexation on amino acid zwitterion stability: results from infrared action spectroscopy. Journal of the American Chemical Society. 130: 6463-71. PMID 18444620 DOI: 10.1021/Ja711343Q  0.487
2008 Oomens J, Steill JD. Free carboxylate stretching modes. The Journal of Physical Chemistry. A. 112: 3281-3. PMID 18363393 DOI: 10.1021/Jp801806E  0.385
2008 Polfer NC, Oomens J, Dunbar RC. Alkali metal complexes of the dipeptides PheAla and AlaPhe: IRMPD spectroscopy. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 9: 579-89. PMID 18293344 DOI: 10.1002/Cphc.200700700  0.481
2008 von Helden G, Compagnon I, Blom MN, Frankowski M, Erlekam U, Oomens J, Brauer B, Gerber RB, Meijer G. Mid-IR spectra of different conformers of phenylalanine in the gas phase. Physical Chemistry Chemical Physics : Pccp. 10: 1248-56. PMID 18292858 DOI: 10.1039/B713274C  0.47
2008 Rodgers MT, Armentrout PB, Oomens J, Steill JD. Infrared multiphoton dissociation spectroscopy of cationized threonine: effects of alkali-metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 112: 2258-67. PMID 18288826 DOI: 10.1021/Jp711237G  0.499
2008 Armentrout PB, Rodgers MT, Oomens J, Steill JD. Infrared multiphoton dissociation spectroscopy of cationized serine: effects of alkali-metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 112: 2248-57. PMID 18288825 DOI: 10.1021/jp710885a  0.403
2008 Oomens J, Morton TH. The cationic C==F+ stretching vibration in the gas phase. Angewandte Chemie (International Ed. in English). 47: 2106-8. PMID 18247388 DOI: 10.1002/Anie.200704657  0.335
2008 Groenewold GS, Gianotto AK, McIlwain ME, Stipdonk MJ, Kullman M, Moore DT, Polfer N, Oomens J, Infante I, Visscher L, Siboulet B, Jong WA. Infrared spectroscopy of discrete uranyl anion complexes. The Journal of Physical Chemistry. A. 112: 508-21. PMID 18163602 DOI: 10.1021/Jp077309Q  0.41
2008 Oomens J, Myers L, Dain R, Leavitt C, Pham V, Gresham G, Groenewold G, Van Stipdonk M. Infrared multiple-photon photodissociation of gas-phase group II metal-nitrate anions International Journal of Mass Spectrometry. 273: 24-30. DOI: 10.1016/J.Ijms.2008.02.013  0.437
2007 Groenewold GS, Oomens J, de Jong WA, Gresham GL, McIlwain ME, Van Stipdonk MJ. Vibrational spectroscopy of anionic nitrate complexes of UO22+ and Eu3+ isolated in the gas phase. Physical Chemistry Chemical Physics : Pccp. 10: 1192-202. PMID 18270621 DOI: 10.1039/B715337F  0.469
2007 Dunbar RC, Polfer NC, Oomens J. Gas-phase zwitterion stabilization by a metal dication. Journal of the American Chemical Society. 129: 14562-3. PMID 17985905 DOI: 10.1021/Ja076131I  0.477
2007 Forbes MW, Bush MF, Polfer NC, Oomens J, Dunbar RC, Williams ER, Jockusch RA. Infrared spectroscopy of arginine cation complexes: direct observation of gas-phase zwitterions. The Journal of Physical Chemistry. A. 111: 11759-70. PMID 17973465 DOI: 10.1021/Jp074859F  0.519
2007 Polfer NC, Oomens J. Reaction products in mass spectrometry elucidated with infrared spectroscopy. Physical Chemistry Chemical Physics : Pccp. 9: 3804-17. PMID 17637973 DOI: 10.1039/B702993B  0.435
2007 Bush MF, Forbes MW, Jockusch RA, Oomens J, Polfer NC, Saykally RJ, Williams ER. Infrared spectroscopy of cationized lysine and epsilon-N-methyllysine in the gas phase: effects of alkali-metal ion size and proton affinity on zwitterion stability. The Journal of Physical Chemistry. A. 111: 7753-60. PMID 17636967 DOI: 10.1021/Jp071902Q  0.519
2007 Blom MN, Compagnon I, Polfer NC, Helden Gv, Meijer G, Suhai S, Paizs B, Oomens J. Stepwise solvation of an amino acid: the appearance of zwitterionic structures. The Journal of Physical Chemistry. A. 111: 7309-16. PMID 17628045 DOI: 10.1021/Jp070211R  0.449
2007 Abo-riziq A, Crews BO, Compagnon I, Oomens J, Meijer G, Von Helden G, Kabelac M, Hobza P, de Vries MS. The mid-IR spectra of 9-ethyl guanine, guanosine, and 2-deoxyguanosine. The Journal of Physical Chemistry. A. 111: 7529-36. PMID 17625809 DOI: 10.1021/Jp072183I  0.456
2007 Polfer NC, Oomens J, Suhai S, Paizs B. Infrared spectroscopy and theoretical studies on gas-phase protonated leu-enkephalin and its fragments: direct experimental evidence for the mobile proton. Journal of the American Chemical Society. 129: 5887-97. PMID 17428052 DOI: 10.1021/Ja068014D  0.467
2007 Groenewold GS, Gianotto AK, Cossel KC, Van Stipdonk MJ, Oomens J, Polfer N, Moore DT, de Jong WA, McIlwain ME. Mid-infrared vibrational spectra of discrete acetone-ligated cerium hydroxide cations. Physical Chemistry Chemical Physics : Pccp. 9: 596-606. PMID 17242741 DOI: 10.1039/B613029A  0.454
2007 Polfer NC, Dunbar RC, Oomens J. Observation of zwitterion formation in the gas-phase H/D-exchange with CH(3)OD: solution-phase structures in the gas phase. Journal of the American Society For Mass Spectrometry. 18: 512-6. PMID 17174103 DOI: 10.1016/J.Jasms.2006.10.015  0.387
2007 Pirali O, Vervloet M, Dahl JE, Carlson RMK, Tielens AGGM, Oomens J. Infrared Spectroscopy of Diamondoid Molecules: New Insights into the Presence of Nanodiamonds in the Interstellar Medium The Astrophysical Journal. 661: 919-925. DOI: 10.1086/516731  0.411
2007 Dunbar RC, Moore DT, Oomens J. IR spectroscopic characterization of intermediates in a gas-phase ionic reaction: The decarbonylation of Co+(acetophenone) International Journal of Mass Spectrometry. 265: 182-186. DOI: 10.1016/J.Ijms.2007.02.003  0.544
2006 Dunbar RC, Moore DT, Oomens J. IR-spectroscopic characterization of acetophenone complexes with Fe+, Co+, and Ni+ using free-electron-laser IRMPD. The Journal of Physical Chemistry. A. 110: 8316-26. PMID 16821815 DOI: 10.1021/Jp0566921  0.379
2006 Polfer NC, Oomens J, Dunbar RC. IRMPD spectroscopy of metal-ion/tryptophan complexes. Physical Chemistry Chemical Physics : Pccp. 8: 2744-51. PMID 16763707 DOI: 10.1039/B603665A  0.457
2006 Groenewold GS, Gianotto AK, Cossel KC, Van Stipdonk MJ, Moore DT, Polfer N, Oomens J, de Jong WA, Visscher L. Vibrational spectroscopy of mass-selected [UO2(ligand)n]2+ complexes in the gas phase: comparison with theory. Journal of the American Chemical Society. 128: 4802-13. PMID 16594717 DOI: 10.1021/Ja058106N  0.455
2006 Compagnon I, Oomens J, Meijer G, von Helden G. Mid-infrared spectroscopy of protected peptides in the gas phase: a probe of the backbone conformation. Journal of the American Chemical Society. 128: 3592-7. PMID 16536532 DOI: 10.1021/Ja055378H  0.419
2006 Polfer NC, Valle JJ, Moore DT, Oomens J, Eyler JR, Bendiak B. Differentiation of isomers by wavelength-tunable infrared multiple-photon dissociation-mass spectrometry: application to glucose-containing disaccharides. Analytical Chemistry. 78: 670-9. PMID 16448038 DOI: 10.1021/Ac0519458  0.457
2006 Polfer NC, Oomens J, Moore DT, von Helden G, Meijer G, Dunbar RC. Infrared spectroscopy of phenylalanine Ag(I) and Zn(II) complexes in the gas phase. Journal of the American Chemical Society. 128: 517-25. PMID 16402839 DOI: 10.1021/Ja0549291  0.523
2006 Szczepanski J, Wang H, Vala M, Tielens AGGM, Eyler JR, Oomens J. Infrared spectroscopy of gas-phase complexes of Fe+ and polycyclic aromatic hydrocarbon molecules Astrophysical Journal. 646: 666-680. DOI: 10.1086/504867  0.432
2006 Oomens J, Polfer N, Pirali O, Ueno Y, Maboudian R, May PW, Filik J, Dahl JE, Liu S, Carlson RM. Infrared spectroscopic investigation of higher diamondoids Journal of Molecular Spectroscopy. 238: 158-167. DOI: 10.1016/J.Jms.2006.05.001  0.392
2006 Oomens J, Sartakov BG, Meijer G, von Helden G. Gas-phase infrared multiple photon dissociation spectroscopy of mass-selected molecular ions International Journal of Mass Spectrometry. 254: 1-19. DOI: 10.1016/J.Ijms.2006.05.009  0.517
2006 Oomens J, Meijer G, Helden Gv. An infrared spectroscopic study of protonated and cationic indazole International Journal of Mass Spectrometry. 249: 199-205. DOI: 10.1016/J.Ijms.2005.12.034  0.528
2005 Oomens J, Polfer N, Moore DT, van der Meer L, Marshall AG, Eyler JR, Meijer G, von Helden G. Charge-state resolved mid-infrared spectroscopy of a gas-phase protein. Physical Chemistry Chemical Physics : Pccp. 7: 1345-8. PMID 19787952 DOI: 10.1039/B502322J  0.408
2005 Polfer NC, Oomens J, Suhai S, Paizs B. Spectroscopic and theoretical evidence for oxazolone ring formation in collision-induced dissociation of peptides. Journal of the American Chemical Society. 127: 17154-5. PMID 16332041 DOI: 10.1021/Ja056553X  0.382
2005 Carçabal P, Jockusch RA, Hünig I, Snoek LC, Kroemer RT, Davis BG, Gamblin DP, Compagnon I, Oomens J, Simons JP. Hydrogen bonding and cooperativity in isolated and hydrated sugars: mannose, galactose, glucose, and lactose. Journal of the American Chemical Society. 127: 11414-25. PMID 16089470 DOI: 10.1021/Ja0518575  0.398
2005 Polfer NC, Paizs B, Snoek LC, Compagnon I, Suhai S, Meijer G, von Helden G, Oomens J. Infrared fingerprint spectroscopy and theoretical studies of potassium ion tagged amino acids and peptides in the gas phase. Journal of the American Chemical Society. 127: 8571-9. PMID 15941293 DOI: 10.1021/Ja050858U  0.475
2005 Moore DT, Oomens J, Eyler JR, von Helden G, Meijer G, Dunbar RC. Infrared spectroscopy of gas-phase Cr+ coordination complexes: determination of binding sites and electronic states. Journal of the American Chemical Society. 127: 7243-54. PMID 15884966 DOI: 10.1021/Ja042431D  0.438
2005 Valle JJ, Eyler JR, Oomens J, Moore DT, Van Der Meer AFG, Von Helden G, Meijer G, Hendrickson CL, Marshall AG, Blakney GT. Free electron laser-Fourier transform ion cyclotron resonance mass spectrometry facility for obtaining infrared multiphoton dissociation spectra of gaseous ions Review of Scientific Instruments. 76: 023103-1-023103-7. DOI: 10.1063/1.1841953  0.484
2004 Moore DT, Oomens J, Eyler JR, Meijer G, von Helden G, Ridge DP. Gas-phase IR spectroscopy of anionic iron carbonyl clusters. Journal of the American Chemical Society. 126: 14726-7. PMID 15535690 DOI: 10.1021/Ja0449527  0.377
2004 Moore DT, Oomens J, van der Meer L, von Helden G, Meijer G, Valle J, Marshall AG, Eyler JR. Probing the vibrations of shared, OH+O-bound protons in the gas phase. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 5: 740-3. PMID 15179731 DOI: 10.1002/Cphc.200400062  0.359
2004 Oomens J, Moore DT, Von Helden G, Meijer G, Dunbar RC. The site of Cr+ attachment to gas-phase aniline from infrared spectroscopy. Journal of the American Chemical Society. 126: 724-5. PMID 14733540 DOI: 10.1021/Ja038867V  0.467
2004 Oomens J, Moore DT, Meijer G, Helden Gv. Infrared multiple photon dynamics and spectroscopy of cationic PABA and its dehydroxylated fragment ion Physical Chemistry Chemical Physics. 6: 710. DOI: 10.1039/B315130A  0.516
2004 Oomens J, von Helden G, Meijer G. Infrared Photodissociation Spectroscopy of the Benzoic Acid Radical Cation in a Quadrupole Trap The Journal of Physical Chemistry A. 108: 8273-8278. DOI: 10.1021/Jp047532C  0.503
2004 Polfer N, Sartakov BG, Oomens J. The infrared spectrum of the adamantyl cation Chemical Physics Letters. 400: 201-205. DOI: 10.1016/J.Cplett.2004.10.108  0.458
2003 Oomens J, Tielens AGGM, Sartakov BG, von Helden G, Meijer G. Laboratory Infrared Spectroscopy of Cationic Polycyclic Aromatic Hydrocarbon Molecules The Astrophysical Journal. 591: 968-985. DOI: 10.1086/375515  0.445
2003 Banisaukas J, Szczepanski J, Eyler J, Vala M, Hirata S, Head-Gordon M, Oomens J, Meijer G, Von Helden G. Vibrational and electronic spectroscopy of acenaphthylene and its cation Journal of Physical Chemistry A. 107: 782-793. DOI: 10.1021/Jp0219754  0.49
2003 Oomens J, Bakker JM, Sartakov BG, Meijer G, von Helden G. The infrared spectrum of the benzoyl cation Chemical Physics Letters. 367: 576-580. DOI: 10.1016/S0009-2614(02)01799-2  0.497
2002 Oomens J, von Helden G, Meijer G. Experimental observation of laser-induced coherent ion motion in a quadrupole trap International Journal of Mass Spectrometry. 221: 163-176. DOI: 10.1016/S1387-3806(02)00988-0  0.369
2001 Piest JA, Oomens J, Bakker J, von Helden G, Meijer G. Vibrational spectroscopy of gas-phase neutral and cationic phenanthrene in their electronic groundstates. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 57: 717-35. PMID 11345249 DOI: 10.1016/S1386-1425(00)00439-X  0.48
2001 Oomens J, Sartakov BG, Tielens AGGM, Meijer G, von Helden G. Gas-Phase Infrared Spectrum of the Coronene Cation The Astrophysical Journal. 560: L99-L103. DOI: 10.1086/324170  0.484
2001 Kunze M, Reuss J, Oomens J, Parker DH. IR excitation of ethylene molecules and clusters embedded in 4He droplets Journal of Chemical Physics. 114: 9463-9469. DOI: 10.1063/1.1369659  0.592
2001 Oomens J, Meijer G, von Helden G. Gas Phase Infrared Spectroscopy of Cationic Indane, Acenaphthene, Fluorene, and Fluoranthene The Journal of Physical Chemistry A. 105: 8302-8309. DOI: 10.1021/Jp0110455  0.503
2000 Kunze M, Reuss J, Oomens J, Harren F, Parker DH. Evidence of a Cage Effect in Superfluid Helium Droplets Zeitschrift FüR Physikalische Chemie. 214: 1209. DOI: 10.1524/Zpch.2000.214.9.1209  0.319
2000 Oomens J, van Roij AJA, Meijer G, von Helden G. Gas‐Phase Infrared Photodissociation Spectroscopy of Cationic Polyaromatic Hydrocarbons The Astrophysical Journal. 542: 404-410. DOI: 10.1086/309545  0.494
1997 Sartakov BG, Oomens J, Reuss J, Fayt A. Interaction of Vibrational Fundamental and Combination States of Ethylene in the 3 &mgr;m Region Journal of Molecular Spectroscopy. 185: 31-47. PMID 9344792 DOI: 10.1006/Jmsp.1997.7378  0.589
1997 Oomens J, Reuss J. Tricky IR Monomer Spectroscopy in Planar Molecular Jets Israel Journal of Chemistry. 37: 367-378. DOI: 10.1002/Ijch.199700042  0.374
1996 Oomens J, Reuss J, Mellau GC, Klee S, Gulaczyk I, Fayt A. The Ethylene Hot Band Spectrum near 3000 cm-1 Journal of Molecular Spectroscopy. 180: 236-48. PMID 8979981 DOI: 10.1006/Jmsp.1996.0247  0.594
1996 Oomens J, Reuss J. The ν1 + ν10 - ν10 hot band in propyne studied in a bimolecular seeded jet Chemical Physics Letters. 250: 217-225. DOI: 10.1016/0009-2614(95)01459-4  0.567
1996 Oomens J, Reuss J. The ν7 + ν9 - ν9 hot band in ethane Journal of Molecular Spectroscopy. 177: 19-28. DOI: 10.1006/Jmsp.1996.0112  0.569
1994 Oomens J, Oudejans L, Reuss J, Fayt A. The ν7 + ν9 ← ν7 hot band in ethylene studied by double resonance techniques Chemical Physics. 187: 57-72. DOI: 10.1016/0301-0104(94)00186-3  0.594
1992 Consalvo D, Oomens J, Parker DH, Reuss J. DABCO: an investigation of the vibrational structured of the S0 and S1 state through two-photon LIF measurements Chemical Physics. 163: 223-239. DOI: 10.1016/0301-0104(92)87105-I  0.49
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