Albert S. Benight - Publications

Affiliations: 
University of Illinois at Chicago, Chicago, IL, United States 
Area:
Biochemistry, Analytical Chemistry, Molecular Biology

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Williams L, Blair S, Chagovetz A, Fish DJ, Benight AS. The paradox of multiplex DNA melting on a surface. Analytical Biochemistry. 409: 150-2. PMID 20869345 DOI: 10.1016/j.ab.2010.09.024  0.92
2010 Fish DJ, Brewood GP, Kim JS, Garbett NC, Chaires JB, Benight AS. Statistical analysis of plasma thermograms measured by differential scanning calorimetry Biophysical Chemistry. 152: 184-190. PMID 20961680 DOI: 10.1016/j.bpc.2010.09.007  0.92
2010 Eichhorn SJ, Dufresne A, Aranguren M, Marcovich NE, Capadona JR, Rowan SJ, Weder C, Thielemans W, Roman M, Renneckar S, Gindl W, Veigel S, Keckes J, Yano H, Abe K, ... ... Benight AS, et al. Review: Current international research into cellulose nanofibres and nanocomposites Journal of Materials Science. 45: 1-33. DOI: 10.1007/S10853-009-3874-0  0.92
2009 Alemayehu S, Fish DJ, Brewood GP, Horne MT, Manyanga F, Dickman R, Yates I, Benight AS. Influence of buffer species on the thermodynamics of short DNA duplex melting: sodium phosphate versus sodium cacodylate. The Journal of Physical Chemistry. B. 113: 2578-86. PMID 19708201 DOI: 10.1021/jp809310w  0.92
2009 Smith AL, Cekan P, Brewood GP, Okonogi TM, Alemayehu S, Hustedt EJ, Benight AS, Sigurdsson ST, Robinson BH. Conformational equilibria of bulged sites in duplex DNA studied by EPR spectroscopy. The Journal of Physical Chemistry. B. 113: 2664-75. PMID 19708106 DOI: 10.1021/Jp808260B  0.92
2009 Manyanga F, Horne MT, Brewood GP, Fish DJ, Dickman R, Benight AS. Origins of the "nucleation" free energy in the hybridization thermodynamics of short duplex DNA. The Journal of Physical Chemistry. B. 113: 2556-63. PMID 19708103 DOI: 10.1021/jp809541m  0.92
2008 Brewood GP, Rangineni Y, Fish DJ, Bhandiwad AS, Evans DR, Solanki R, Benight AS. Electrical detection of the temperature induced melting transition of a DNA hairpin covalently attached to gold interdigitated microelectrodes. Nucleic Acids Research. 36: e98. PMID 18628294 DOI: 10.1093/Nar/Gkn436  0.92
2007 Fish DJ, Horne MT, Brewood GP, Goodarzi JP, Alemayehu S, Bhandiwad A, Searles RP, Benight AS. DNA multiplex hybridization on microarrays and thermodynamic stability in solution: a direct comparison. Nucleic Acids Research. 35: 7197-208. PMID 17947320 DOI: 10.1093/Nar/Gkm865  0.92
2007 Fish DJ, Horne MT, Searles RP, Brewood GP, Benight AS. Multiplex SNP discrimination. Biophysical Journal. 92: L89-91. PMID 17369420 DOI: 10.1529/biophysj.107.105320  0.92
2006 Mandell KE, Vallone PM, Owczarzy R, Riccelli PV, Benight AS. Studies of DNA dumbbells VIII. Melting analysis of DNA dumbbells with dinucleotide repeat stem sequences. Biopolymers. 82: 199-221. PMID 16345003 DOI: 10.1002/Bip.20425  0.92
2003 Qu X, Ren J, Riccelli PV, Benight AS, Chaires JB. Enthalpy/Entropy Compensation: Influence of DNA Flanking Sequence on the Binding of 7-Amino Actinomycin D to its Primary Binding Site in Short DNA Duplexes Biochemistry. 42: 11960-11967. PMID 14556627 DOI: 10.1021/bi0347813  0.92
2003 Riccelli PV, Hall TS, Pancoska P, Mandell KE, Benight AS. DNA sequence context and multiplex hybridization reactions: melting studies of heteromorphic duplex DNA complexes. Journal of the American Chemical Society. 125: 141-50. PMID 12515515 DOI: 10.1021/Ja027955X  0.92
2002 Riccelli PV, Mandell KE, Benight AS. Melting studies of dangling-ended DNA hairpins: effects of end length, loop sequence and biotinylation of loop bases. Nucleic Acids Research. 30: 4088-93. PMID 12235393 DOI: 10.1093/Nar/Gkf514  0.92
2001 Hall TS, Pancoska P, Riccelli PV, Mandell K, Benight AS. Sequence context and thermodynamic stability of a single base pair mismatch in short deoxyoligonucleotide duplexes [8] Journal of the American Chemical Society. 123: 11811-11812. PMID 11716744 DOI: 10.1021/Ja016360J  0.92
2001 Stelea SD, Pancoska P, Benight AS, Keiderling TA. Thermal unfolding of ribonuclease A in phosphate at neutral pH: deviations from the two-state model. Protein Science : a Publication of the Protein Society. 10: 970-8. PMID 11316877 DOI: 10.1110/Ps.47101  0.92
2001 Riccelli PV, Merante F, Leung KT, Bortolin S, Zastawny RL, Janeczko R, Benight AS. Hybridization of single-stranded DNA targets to immobilized complementary DNA probes: comparison of hairpin versus linear capture probes. Nucleic Acids Research. 29: 996-1004. PMID 11160933 DOI: 10.1093/NAR/29.4.996  0.64
2000 Wadkins RM, Tung CS, Vallone PM, Benight AS. The role of the loop in binding of an actinomycin D analog to hairpins formed by single-stranded DNA Archives of Biochemistry and Biophysics. 384: 199-203. PMID 11147831 DOI: 10.1006/Abbi.2000.2113  0.92
1999 Vallone PM, Paner TM, Hilario J, Lane MJ, Faldasz BD, Benight AS. Melting studies of short DNA hairpins: Influence of loop sequence and adjoining base pair identity on hairpin thermodynamic stability Biopolymers. 50: 425-442. PMID 10423551 DOI: 10.1002/(Sici)1097-0282(19991005)50:4<425::Aid-Bip8>3.0.Co;2-B  0.92
1997 Schurr JM, Delrow JJ, Fujimoto BS, Benight AS. The question of long-range allosteric transitions in DNA. Biopolymers. 44: 283-308. PMID 9591480 DOI: 10.1002/(Sici)1097-0282(1997)44:3<283::Aid-Bip7>3.0.Co;2-R  0.92
1997 Owczarzy R, Vallone PM, Gallo FJ, Paner TM, Lane MJ, Benight AS. Predicting sequence-dependent melting stability of short duplex DNA oligomers Biopolymers. 44: 217-239. PMID 9591477 DOI: 10.1002/(Sici)1097-0282(1997)44:3<217::Aid-Bip3>3.0.Co;2-Y  0.92
1997 Lane MJ, Paner T, Kashin I, Faldasz BD, Li B, Gallo FJ, Benight AS. The thermodynamic advantage of DNA oligonucleotide 'stacking hybridization' reactions: Energetics of a DNA nick Nucleic Acids Research. 25: 611-616. PMID 9016603 DOI: 10.1093/Nar/25.3.611  0.92
1996 Riccelli PV, Hilario J, Gallo FJ, Young AP, Benight AS. DNA and RNA oligomer sequences from the 3' noncoding region of the chicken glutamine synthetase gene form intramolecular hairpins Biochemistry. 35: 15364-15372. PMID 8952488 DOI: 10.1021/bi9615203  0.92
1993 Sheardy RD, Suh D, Kurzinsky R, Doktycz MJ, Benight AS, Chaires JB. Sequence dependence of the free energy of B-Z junction formation in deoxyoligonucleotides Journal of Molecular Biology. 231: 475-488. PMID 8510158 DOI: 10.1006/Jmbi.1993.1295  0.92
1993 Paner TM, Gallo FJ, Doktycz MJ, Benight AS. Studies of DNA dumbbells. V. A DNA triplex formed between a 28 base-pair DNA dumbbell substrate and a 16 base linear single strand Biopolymers. 33: 1779-1789. PMID 8268406 DOI: 10.1002/Bip.360331204  0.92
1992 Amaratunga M, Snowden-Ifft E, Wemmer DE, Benight AS. Studies of DNA dumbbells. II. Construction and characterization of DNA dumbbells with a 16 base-pair duplex stem and Tn end loops (n = 2, 3, 4, 6, 8, 10, 14). Biopolymers. 32: 865-79. PMID 1391635 DOI: 10.1002/Bip.360320713  0.92
1992 Doktycz MJ, Goldstein RF, Paner TM, Gallo FJ, Benight AS. Studies of DNA dumbbells. I. Melting curves of 17 DNA dumbbells with different duplex stem sequences linked by T4 endloops: Evaluation of the nearest-neighbor stacking interactions in DNA Biopolymers. 32: 849-864. PMID 1391634 DOI: 10.1002/Bip.360320712  0.92
1991 Benight AS, Wilson DH, Budzynski DM, Goldstein RF. Dynamic light scattering investigations of RecA self-assembly and interactions with single strand DNA Biochimie. 73: 143-155. PMID 1883878 DOI: 10.1016/0300-9084(91)90197-9  0.92
1990 Wilson DH, Price HL, Henderson J, Hanlon S, Benight AS. Structure and dynamics of M13mp19 circular single-strand DNA: Effects of ionic strength Biopolymers. 29: 357-376. PMID 2331504 DOI: 10.1002/Bip.360290208  0.92
1988 Wu PG, Song L, Clendenning JB, Fujimoto BS, Benight AS, Schurr JM. Interaction of chloroquine with linear and supercoiled DNAs. Effect on the torsional dynamics, rigidity, and twist energy parameter. Biochemistry. 27: 8128-44. PMID 3233199  0.72
1988 Benight AS, Schurr JM, Flynn PF, Reid BR, Wemmer DE. Melting of a self-complementary DNA minicircle. Comparison of optical melting theory with exchange broadening of the nuclear magnetic resonance spectrum. Journal of Molecular Biology. 200: 377-99. PMID 2836596 DOI: 10.1016/0022-2836(88)90248-3  0.92
1986 Wemmer DE, Benight AS. Preparation and melting of single strand circular DNA loops. Nucleic Acids Research. 13: 8611-21. PMID 4080549 DOI: 10.1093/Nar/13.23.8611  0.6
1985 Langowski J, Fujimoto BS, Wemmer DE, Benight AS, Drobny G, Shibata JH, Schurr JM. Deformational dynamics and NMR relaxation of supercoiled DNAs. Biopolymers. 24: 1023-56. PMID 4027335 DOI: 10.1002/Bip.360240609  0.92
1985 Langowski J, Benight AS, Fujimoto BS, Schurr JM, Schomburg U. Change of conformation and internal dynamics of supercoiled DNA upon binding of Escherichia coli single-strand binding protein. Biochemistry. 24: 4022-8. PMID 2996588  0.92
1985 Wartell RM, Benight AS. Thermal denaturation of DNA molecules: A comparison of theory with experiment Physics Reports. 126: 67-107. DOI: 10.1016/0370-1573(85)90060-2  0.92
1983 Benight AS, Wartell RM. Influence of base-pair changes and cooperativity parameters on the melting curves of short DNAs. Biopolymers. 22: 1409-25. PMID 6307412 DOI: 10.1002/Bip.360220512  0.92
1982 Wartell RM, Benight AS. Fluctuational base-pair opening in DNA at temperatures below the helix-coil transition region. Biopolymers. 21: 2069-81. PMID 7171728 DOI: 10.1002/Bip.360211011  0.92
1981 Benight AS, Wartell RM, Howell DK. Theory agrees with experimental thermal denaturation of short DNA restriction fragments. Nature. 289: 203-5. PMID 6256654 DOI: 10.1038/289203A0  0.92
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