Sung-Hou Kim - Publications

Affiliations: 
University of California, Berkeley, Berkeley, CA 
Area:
Structural biology
Website:
http://chem.berkeley.edu/faculty/kim/index.php

92 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Kim BJ, Kim SH. Prediction of inherited genomic susceptibility to 20 common cancer types by a supervised machine-learning method. Proceedings of the National Academy of Sciences of the United States of America. PMID 29358382 DOI: 10.1073/pnas.1717960115  0.44
2014 Kim M, Kim SH. Empirical prediction of genomic susceptibilities for multiple cancer classes. Proceedings of the National Academy of Sciences of the United States of America. 111: 1921-6. PMID 24449885 DOI: 10.1073/pnas.1318383110  1
2014 De D, Jeong MH, Leem YE, Svergun DI, Wemmer DE, Kang JS, Kim KK, Kim SH. Inhibition of master transcription factors in pluripotent cells induces early stage differentiation. Proceedings of the National Academy of Sciences of the United States of America. 111: 1778-83. PMID 24434556 DOI: 10.1073/pnas.1323386111  1
2011 Sims GE, Kim SH. Whole-genome phylogeny of Escherichia coli/Shigella group by feature frequency profiles (FFPs). Proceedings of the National Academy of Sciences of the United States of America. 108: 8329-34. PMID 21536867 DOI: 10.1073/pnas.1105168108  1
2011 Song H, Hwang HJ, Chang W, Song BW, Cha MJ, Kim IK, Lim S, Choi EJ, Ham O, Lee CY, Park JH, Lee SY, Choi E, Lee C, Lee M, ... ... Kim SH, et al. Cardiomyocytes from phorbol myristate acetate-activated mesenchymal stem cells restore electromechanical function in infarcted rat hearts. Proceedings of the National Academy of Sciences of the United States of America. 108: 296-301. PMID 21173226 DOI: 10.1073/pnas.1015873107  0.56
2010 Jun SR, Sims GE, Wu GA, Kim SH. Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution. Proceedings of the National Academy of Sciences of the United States of America. 107: 133-8. PMID 20018669 DOI: 10.1073/pnas.0913033107  1
2009 Sims GE, Jun SR, Wu GA, Kim SH. Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions. Proceedings of the National Academy of Sciences of the United States of America. 106: 17077-82. PMID 19805074 DOI: 10.1073/pnas.0909377106  1
2009 Wu GA, Jun SR, Sims GE, Kim SH. Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method. Proceedings of the National Academy of Sciences of the United States of America. 106: 12826-31. PMID 19553209 DOI: 10.1073/pnas.0905115106  1
2009 Lee J, Kim SH. Water polygons in high-resolution protein crystal structures. Protein Science : a Publication of the Protein Society. 18: 1370-6. PMID 19551896 DOI: 10.1002/pro.162  1
2009 Lee J, Kim SH. PDB Editor: a user-friendly Java-based Protein Data Bank file editor with a GUI. Acta Crystallographica. Section D, Biological Crystallography. 65: 399-402. PMID 19307724 DOI: 10.1107/S090744490900451X  1
2009 Sims GE, Jun SR, Wu GA, Kim SH. Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions. Proceedings of the National Academy of Sciences of the United States of America. 106: 2677-82. PMID 19188606 DOI: 10.1073/pnas.0813249106  1
2009 Lee J, Kim SH. High-throughput T7 LIC vector for introducing C-terminal poly-histidine tags with variable lengths without extra sequences. Protein Expression and Purification. 63: 58-61. PMID 18824233 DOI: 10.1016/j.pep.2008.09.005  1
2008 Dahl C, Schulte A, Stockdreher Y, Hong C, Grimm F, Sander J, Kim R, Kim SH, Shin DH. Structural and molecular genetic insight into a widespread sulfur oxidation pathway. Journal of Molecular Biology. 384: 1287-300. PMID 18952098 DOI: 10.1016/j.jmb.2008.10.016  1
2008 Chi YI, Martick M, Lares M, Kim R, Scott WG, Kim SH. Capturing hammerhead ribozyme structures in action by modulating general base catalysis. Plos Biology. 6: e234. PMID 18834200 DOI: 10.1371/journal.pbio.0060234  0.6
2008 Kim SH, Shin DH, Kim R, Adams P, Chandonia JM. Structural genomics of minimal organisms: pipeline and results. Methods in Molecular Biology (Clifton, N.J.). 426: 475-96. PMID 18542885 DOI: 10.1007/978-1-60327-058-8_32  1
2008 Hwang KC, Kim JY, Chang W, Kim DS, Lim S, Kang SM, Song BW, Ha HY, Huh YJ, Choi IG, Hwang DY, Song H, Jang Y, Chung N, Kim SH, et al. Chemicals that modulate stem cell differentiation. Proceedings of the National Academy of Sciences of the United States of America. 105: 7467-71. PMID 18480249 DOI: 10.1073/pnas.0802825105  0.6
2008 Tsai J, Lee JT, Wang W, Zhang J, Cho H, Mamo S, Bremer R, Gillette S, Kong J, Haass NK, Sproesser K, Li L, Smalley KS, Fong D, Zhu YL, ... ... Kim SH, et al. Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity. Proceedings of the National Academy of Sciences of the United States of America. 105: 3041-6. PMID 18287029 DOI: 10.1073/pnas.0711741105  1
2008 Gräslund S, Nordlund P, Weigelt J, Hallberg BM, Bray J, Gileadi O, Knapp S, Oppermann U, Arrowsmith C, Hui R, Ming J, dhe-Paganon S, ... ... Kim SH, et al. Protein production and purification. Nature Methods. 5: 135-46. PMID 18235434 DOI: 10.1038/nmeth.f.202  1
2008 Shin DH, Proudfoot M, Lim HJ, Choi IK, Yokota H, Yakunin AF, Kim R, Kim SH. Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans. Proteins. 70: 1000-9. PMID 17847097 DOI: 10.1002/prot.21584  1
2007 Shin DH, Hou J, Chandonia JM, Das D, Choi IG, Kim R, Kim SH. Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center. Journal of Structural and Functional Genomics. 8: 99-105. PMID 17764033 DOI: 10.1007/s10969-007-9025-4  1
2007 Xu QS, Ankoudinova I, Lou Y, Yokota H, Kim R, Kim SH. Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans. Proteins. 69: 409-14. PMID 17636568 DOI: 10.1002/prot.21292  0.68
2007 Oganesyan V, Adams PD, Jancarik J, Kim R, Kim SH. Structure of O67745_AQUAE, a hypothetical protein from Aquifex aeolicus. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63: 369-74. PMID 17565173 DOI: 10.1107/S1744309107018945  0.6
2007 Choi IG, Kim SH. Global extent of horizontal gene transfer. Proceedings of the National Academy of Sciences of the United States of America. 104: 4489-94. PMID 17360551 DOI: 10.1073/pnas.0611557104  1
2007 Das D, Hyun H, Lou Y, Yokota H, Kim R, Kim SH. Crystal structure of a novel single-stranded DNA binding protein from Mycoplasma pneumoniae. Proteins. 67: 776-82. PMID 17348019 DOI: 10.1002/prot.21340  0.68
2007 Das D, Xu QS, Lee JY, Ankoudinova I, Huang C, Lou Y, DeGiovanni A, Kim R, Kim SH. Crystal structure of the multidrug efflux transporter AcrB at 3.1A resolution reveals the N-terminal region with conserved amino acids. Journal of Structural Biology. 158: 494-502. PMID 17275331 DOI: 10.1016/j.jsb.2006.12.004  0.68
2007 Oganesyan N, Ankoudinova I, Kim SH, Kim R. Effect of osmotic stress and heat shock in recombinant protein overexpression and crystallization. Protein Expression and Purification. 52: 280-5. PMID 17126029 DOI: 10.1016/j.pep.2006.09.015  1
2006 Choi IG, Kim SH. Evolution of protein structural classes and protein sequence families. Proceedings of the National Academy of Sciences of the United States of America. 103: 14056-61. PMID 16959887 DOI: 10.1073/pnas.0606239103  1
2006 Chandonia JM, Kim SH. Structural proteomics of minimal organisms: conservation of protein fold usage and evolutionary implications. Bmc Structural Biology. 6: 7. PMID 16566839 DOI: 10.1186/1472-6807-6-7  0.68
2006 Sims GE, Kim SH. A method for evaluating the structural quality of protein models by using higher-order phi-psi pairs scoring. Proceedings of the National Academy of Sciences of the United States of America. 103: 4428-32. PMID 16537409 DOI: 10.1073/pnas.0511333103  1
2006 Shin DH, Kim JS, Yokota H, Kim R, Kim SH. Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae. Protein Science : a Publication of the Protein Society. 15: 921-8. PMID 16522803 DOI: 10.1110/ps.051993506  0.68
2006 Kim JS, Shin DH, Pufan R, Huang C, Yokota H, Kim R, Kim SH. Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning. Proteins. 62: 322-8. PMID 16294331 DOI: 10.1002/prot.20751  0.68
2006 Chandonia JM, Kim SH, Brenner SE. Target selection and deselection at the Berkeley Structural Genomics Center. Proteins. 62: 356-70. PMID 16276528 DOI: 10.1002/prot.20674  0.6
2005 Oganesyan V, Huang C, Adams PD, Jancarik J, Yokota HA, Kim R, Kim SH. Structure of a NAD kinase from Thermotoga maritima at 2.3 A resolution. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 61: 640-6. PMID 16511117 DOI: 10.1107/S1744309105019780  0.6
2005 Xu QS, Jancarik J, Lou Y, Kuznetsova K, Yakunin AF, Yokota H, Adams P, Kim R, Kim SH. Crystal structures of a phosphotransacetylase from Bacillus subtilis and its complex with acetyl phosphate. Journal of Structural and Functional Genomics. 6: 269-79. PMID 16283428 DOI: 10.1007/s10969-005-9001-9  1
2005 Shin DH, Lou Y, Jancarik J, Yokota H, Kim R, Kim SH. Crystal structure of TM1457 from Thermotoga maritima. Journal of Structural Biology. 152: 113-7. PMID 16242963 DOI: 10.1016/j.jsb.2005.08.008  1
2005 Liu J, Lou Y, Yokota H, Adams PD, Kim R, Kim SH. Crystal structures of an NAD kinase from Archaeoglobus fulgidus in complex with ATP, NAD, or NADP. Journal of Molecular Biology. 354: 289-303. PMID 16242716 DOI: 10.1016/j.jmb.2005.09.026  0.6
2005 Oganesyan N, Kim SH, Kim R. On-column protein refolding for crystallization. Journal of Structural and Functional Genomics. 6: 177-82. PMID 16211516 DOI: 10.1007/s10969-005-2827-3  1
2005 Kim SH, Shin DH, Liu J, Oganesyan V, Chen S, Xu QS, Kim JS, Das D, Schulze-Gahmen U, Holbrook SR, Holbrook EL, Martinez BA, Oganesyan N, DeGiovanni A, Lou Y, et al. Structural genomics of minimal organisms and protein fold space. Journal of Structural and Functional Genomics. 6: 63-70. PMID 16211501 DOI: 10.1007/s10969-005-2651-9  0.6
2005 Schulze-Gahmen U, Aono S, Chen S, Yokota H, Kim R, Kim SH. Structure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function. Acta Crystallographica. Section D, Biological Crystallography. 61: 1343-7. PMID 16204885 DOI: 10.1107/S090744490502264X  0.68
2005 Chen S, Yakunin AF, Proudfoot M, Kim R, Kim SH. Structural and functional characterization of a 5,10-methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087). Proteins. 61: 433-43. PMID 16104022 DOI: 10.1002/prot.20591  0.68
2005 Liu J, Huang C, Shin DH, Yokota H, Jancarik J, Kim JS, Adams PD, Kim R, Kim SH. Crystal structure of a heat-inducible transcriptional repressor HrcA from Thermotoga maritima: structural insight into DNA binding and dimerization. Journal of Molecular Biology. 350: 987-96. PMID 15979091 DOI: 10.1016/j.jmb.2005.04.021  1
2005 Oganesyan V, Oganesyan N, Adams PD, Jancarik J, Yokota HA, Kim R, Kim SH. Crystal structure of the "PhoU-like" phosphate uptake regulator from Aquifex aeolicus. Journal of Bacteriology. 187: 4238-44. PMID 15937186 DOI: 10.1128/JB.187.12.4238-4244.2005  0.6
2005 Liu J, Oganesyan N, Shin DH, Jancarik J, Yokota H, Kim R, Kim SH. Structural characterization of an iron-sulfur cluster assembly protein IscU in a zinc-bound form. Proteins. 59: 875-81. PMID 15815978 DOI: 10.1002/prot.20421  1
2005 Shin DH, Oganesyan N, Jancarik J, Yokota H, Kim R, Kim SH. Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum. The Journal of Biological Chemistry. 280: 18326-35. PMID 15753098 DOI: 10.1074/jbc.M501622200  1
2005 Kim JS, DeGiovanni A, Jancarik J, Adams PD, Yokota H, Kim R, Kim SH. Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications. Proceedings of the National Academy of Sciences of the United States of America. 102: 3248-53. PMID 15728358 DOI: 10.1073/pnas.0409851102  0.6
2005 Liu J, Lou Y, Yokota H, Adams PD, Kim R, Kim SH. Crystal structure of a PhoU protein homologue: a new class of metalloprotein containing multinuclear iron clusters. The Journal of Biological Chemistry. 280: 15960-6. PMID 15716271 DOI: 10.1074/jbc.M414117200  0.6
2005 Hou J, Jun SR, Zhang C, Kim SH. Global mapping of the protein structure space and application in structure-based inference of protein function. Proceedings of the National Academy of Sciences of the United States of America. 102: 3651-6. PMID 15705717 DOI: 10.1073/pnas.0409772102  0.8
2005 Card GL, Blasdel L, England BP, Zhang C, Suzuki Y, Gillette S, Fong D, Ibrahim PN, Artis DR, Bollag G, Milburn MV, Kim SH, Schlessinger J, Zhang KY. A family of phosphodiesterase inhibitors discovered by cocrystallography and scaffold-based drug design. Nature Biotechnology. 23: 201-7. PMID 15685167 DOI: 10.1038/nbt1059  1
2005 Sims GE, Choi IG, Kim SH. Protein conformational space in higher order phi-Psi maps. Proceedings of the National Academy of Sciences of the United States of America. 102: 618-21. PMID 15640351 DOI: 10.1073/pnas.0408746102  1
2005 Das D, Oganesyan N, Yokota H, Pufan R, Kim R, Kim SH. Crystal structure of the conserved hypothetical protein MPN330 (GI: 1674200) from Mycoplasma pneumoniae. Proteins. 58: 504-8. PMID 15562512 DOI: 10.1002/prot.20316  0.68
2005 Wang W, Kim R, Yokota H, Kim SH. Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima. Proteins. 58: 246-8. PMID 15468322 DOI: 10.1002/prot.20207  0.68
2004 Card GL, England BP, Suzuki Y, Fong D, Powell B, Lee B, Luu C, Tabrizizad M, Gillette S, Ibrahim PN, Artis DR, Bollag G, Milburn MV, Kim SH, Schlessinger J, et al. Structural basis for the activity of drugs that inhibit phosphodiesterases. Structure (London, England : 1993). 12: 2233-47. PMID 15576036 DOI: 10.1016/j.str.2004.10.004  1
2004 Jancarik J, Pufan R, Hong C, Kim SH, Kim R. Optimum solubility (OS) screening: an efficient method to optimize buffer conditions for homogeneity and crystallization of proteins. Acta Crystallographica. Section D, Biological Crystallography. 60: 1670-3. PMID 15333951 DOI: 10.1107/S0907444904010972  1
2004 Shin DH, Lou Y, Jancarik J, Yokota H, Kim R, Kim SH. Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain. Proceedings of the National Academy of Sciences of the United States of America. 101: 13198-203. PMID 15331784 DOI: 10.1073/pnas.0405202101  1
2004 Shin DH, Brandsen J, Jancarik J, Yokota H, Kim R, Kim SH. Structural analyses of peptide release factor 1 from Thermotoga maritima reveal domain flexibility required for its interaction with the ribosome. Journal of Molecular Biology. 341: 227-39. PMID 15312775 DOI: 10.1016/j.jmb.2004.05.055  1
2004 Chen S, Shin DH, Pufan R, Kim R, Kim SH. Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution. Proteins. 56: 839-43. PMID 15281135 DOI: 10.1002/prot.20214  0.68
2004 Busso D, Kim R, Kim SH. Using an Escherichia coli cell-free extract to screen for soluble expression of recombinant proteins. Journal of Structural and Functional Genomics. 5: 69-74. PMID 15263845 DOI: 10.1023/B:JSFG.0000029197.44728.c5  1
2004 Zhang KY, Card GL, Suzuki Y, Artis DR, Fong D, Gillette S, Hsieh D, Neiman J, West BL, Zhang C, Milburn MV, Kim SH, Schlessinger J, Bollag G. A glutamine switch mechanism for nucleotide selectivity by phosphodiesterases. Molecular Cell. 15: 279-86. PMID 15260978 DOI: 10.1016/j.molcel.2004.07.005  1
2004 Oganesyan V, Pufan R, DeGiovanni A, Yokota H, Kim R, Kim SH. Structure of the putative DNA-binding protein SP_1288 from Streptococcus pyogenes. Acta Crystallographica. Section D, Biological Crystallography. 60: 1266-71. PMID 15213388 DOI: 10.1107/S0907444904009394  0.6
2004 Liu J, Yokota H, Kim R, Kim SH. A conserved hypothetical protein from Mycoplasma genitalium shows structural homology to nusb proteins. Proteins. 55: 1082-6. PMID 15146506 DOI: 10.1002/prot.20119  0.68
2004 Chen S, Jancrick J, Yokota H, Kim R, Kim SH. Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif. Proteins. 55: 785-91. PMID 15146477 DOI: 10.1002/prot.10593  0.68
2004 Chen S, Yakunin AF, Kuznetsova E, Busso D, Pufan R, Proudfoot M, Kim R, Kim SH. Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii. The Journal of Biological Chemistry. 279: 31854-62. PMID 15128743 DOI: 10.1074/jbc.M401059200  0.68
2004 Shin DH, Choi IG, Busso D, Jancarik J, Yokota H, Kim R, Kim SH. Structure of OsmC from Escherichia coli: a salt-shock-induced protein. Acta Crystallographica. Section D, Biological Crystallography. 60: 903-11. PMID 15103136 DOI: 10.1107/S0907444904005013  1
2004 Xu QS, Shin DH, Pufan R, Yokota H, Kim R, Kim SH. Crystal structure of a phosphotransacetylase from Streptococcus pyogenes. Proteins. 55: 479-81. PMID 15048838 DOI: 10.1002/prot.20039  0.68
2004 Choi IG, Kwon J, Kim SH. Local feature frequency profile: a method to measure structural similarity in proteins. Proceedings of the National Academy of Sciences of the United States of America. 101: 3797-802. PMID 14985506 DOI: 10.1073/pnas.0308656100  1
2003 Kim SH, Shin DH, Choi IG, Schulze-Gahmen U, Chen S, Kim R. Structure-based functional inference in structural genomics. Journal of Structural and Functional Genomics. 4: 129-35. PMID 14649297  1
2003 Shin DH, Nguyen HH, Jancarik J, Yokota H, Kim R, Kim SH. Crystal structure of NusA from Thermotoga maritima and functional implication of the N-terminal domain. Biochemistry. 42: 13429-37. PMID 14621988 DOI: 10.1021/bi035118h  1
2003 Moshinsky DJ, Bellamacina CR, Boisvert DC, Huang P, Hui T, Jancarik J, Kim SH, Rice AG. SU9516: biochemical analysis of cdk inhibition and crystal structure in complex with cdk2. Biochemical and Biophysical Research Communications. 310: 1026-31. PMID 14550307 DOI: 10.1016/j.bbrc.2003.09.114  0.6
2003 Liu J, Wang W, Shin DH, Yokota H, Kim R, Kim SH. Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus at 2.6 A resolution: a novel methyltransferase fold. Proteins. 53: 326-8. PMID 14517984 DOI: 10.1002/prot.10479  0.68
2003 Sims GE, Kim SH. Global mapping of nucleic acid conformational space: dinucleoside monophosphate conformations and transition pathways among conformational classes. Nucleic Acids Research. 31: 5607-16. PMID 14500824 DOI: 10.1093/nar/gkg750  1
2003 Choi IG, Shin DH, Brandsen J, Jancarik J, Busso D, Yokota H, Kim R, Kim SH. Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution. Journal of Structural and Functional Genomics. 4: 31-4. PMID 12943365  1
2003 Wang W, Kim R, Jancarik J, Yokota H, Kim SH. Crystal structure of a flavin-binding protein from Thermotoga maritima. Proteins. 52: 633-5. PMID 12910462 DOI: 10.1002/prot.10353  1
2003 Oganesyan V, Busso D, Brandsen J, Chen S, Jancarik J, Kim R, Kim SH. Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus. Acta Crystallographica. Section D, Biological Crystallography. 59: 1219-23. PMID 12832766 DOI: 10.1107/S0907444903011028  0.6
2003 Shin DH, Roberts A, Jancarik J, Yokota H, Kim R, Wemmer DE, Kim SH. Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima. Protein Science : a Publication of the Protein Society. 12: 1464-72. PMID 12824492 DOI: 10.1110/ps.0302703  0.6
2003 Kim R, Lai L, Lee HH, Cheong GW, Kim KK, Wu Z, Yokota H, Marqusee S, Kim SH. On the mechanism of chaperone activity of the small heat-shock protein of Methanococcus jannaschii. Proceedings of the National Academy of Sciences of the United States of America. 100: 8151-5. PMID 12817080 DOI: 10.1073/pnas.1032940100  0.6
2003 Busso D, Kim R, Kim SH. Expression of soluble recombinant proteins in a cell-free system using a 96-well format. Journal of Biochemical and Biophysical Methods. 55: 233-40. PMID 12706907 DOI: 10.1016/S0165-022X(03)00049-6  1
2003 Hou J, Sims GE, Zhang C, Kim SH. A global representation of the protein fold space. Proceedings of the National Academy of Sciences of the United States of America. 100: 2386-90. PMID 12606708 DOI: 10.1073/pnas.2628030100  1
2003 Schulze-Gahmen U, Pelaschier J, Yokota H, Kim R, Kim SH. Crystal structure of a hypothetical protein, TM841 of Thermotoga maritima, reveals its function as a fatty acid-binding protein. Proteins. 50: 526-30. PMID 12577257 DOI: 10.1002/prot.10305  0.6
2003 Zhang C, Kim SH. Overview of structural genomics: from structure to function. Current Opinion in Chemical Biology. 7: 28-32. PMID 12547423  0.8
2002 Huang L, Hung L, Odell M, Yokota H, Kim R, Kim SH. Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii. Journal of Structural and Functional Genomics. 2: 121-7. PMID 12836702  0.68
2002 Shin DH, Yokota H, Kim R, Kim SH. Crystal structure of a conserved hypothetical protein from Escherichia coli. Journal of Structural and Functional Genomics. 2: 53-66. PMID 12836674  0.68
2002 Kim SH, Wang W, Kim KK. Dynamic and clustering model of bacterial chemotaxis receptors: structural basis for signaling and high sensitivity. Proceedings of the National Academy of Sciences of the United States of America. 99: 11611-5. PMID 12186970 DOI: 10.1073/pnas.132376499  0.6
2002 Shin DH, Yokota H, Kim R, Kim SH. Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus. Proceedings of the National Academy of Sciences of the United States of America. 99: 7980-5. PMID 12060744 DOI: 10.1073/pnas.132241399  0.68
2002 Wang W, Cho HS, Kim R, Jancarik J, Yokota H, Nguyen HH, Grigoriev IV, Wemmer DE, Kim SH. Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states. Journal of Molecular Biology. 319: 421-31. PMID 12051918 DOI: 10.1016/S0022-2836(02)00324-8  0.6
2002 Zhang C, Hou J, Kim SH. Fold prediction of helical proteins using torsion angle dynamics and predicted restraints. Proceedings of the National Academy of Sciences of the United States of America. 99: 3581-5. PMID 11904420 DOI: 10.1073/pnas.052003799  1
2002 Martinez-Cruz LA, Dreyer MK, Boisvert DC, Yokota H, Martinez-Chantar ML, Kim R, Kim SH. Crystal structure of MJ1247 protein from M. jannaschii at 2.0 A resolution infers a molecular function of 3-hexulose-6-phosphate isomerase. Structure (London, England : 1993). 10: 195-204. PMID 11839305  0.68
2002 Schulze-Gahmen U, Kim SH. Structural basis for CDK6 activation by a virus-encoded cyclin. Nature Structural Biology. 9: 177-81. PMID 11828325 DOI: 10.1038/nsb756  1
1996 Yeh JI, Biemann HP, Privé GG, Pandit J, Koshland DE, Kim SH. High-resolution structures of the ligand binding domain of the wild-type bacterial aspartate receptor Journal of Molecular Biology. 262: 186-201. PMID 8831788 DOI: 10.1006/jmbi.1996.0507  1
1993 Scott WG, Milligan DL, Milburn MV, Privé GG, Yeh J, Koshland DE, Kim SH. Refined structures of the ligand-binding domain of the aspartate receptor from Salmonella typhimurium Journal of Molecular Biology. 232: 555-573. PMID 8345523  1
1992 Privé GG, Milburn MV, Tong L, de Vos AM, Yamaizumi Z, Nishimura S, Kim SH. X-ray crystal structures of transforming p21 ras mutants suggest a transition-state stabilization mechanism for GTP hydrolysis. Proceedings of the National Academy of Sciences of the United States of America. 89: 3649-53. PMID 1565661  1
1992 Kim SH, Prive GG, Yeh J, Scott WG, Milburn MV. A model for transmembrane signaling in a bacterial chemotaxis receptor Cold Spring Harbor Symposia On Quantitative Biology. 57: 17-24. PMID 1339657  1
1991 Milburn MV, Privé GG, Milligan DL, Scott WG, Yeh J, Jancarik J, Koshland DE, Kim SH. Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand Science. 254: 1342-1347. PMID 1660187  1
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