Jerry Yang - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Bioorganic Chemistry, Molecular Self-Assembly, Molecular Synthesis, Materials Chemistry, Bionanotechnology
Website:
http://www-chem.ucsd.edu/faculty/profiles/yang_jerry.html

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Cifelli JL, Berg KR, Yang J. Benzothiazole amphiphiles promote RasGRF1-associated dendritic spine formation in human stem cell-derived neurons. Febs Open Bio. PMID 31943943 DOI: 10.1002/2211-5463.12788  0.56
2019 Leriche G, Stengel D, Onofrei D, Koyanagi T, Holland GP, Yang J. Fusion of Bipolar Tetraether Lipid Membranes Without Enhanced Leakage of Small Molecules. Scientific Reports. 9: 19359. PMID 31852914 DOI: 10.1038/s41598-019-55494-z  0.48
2019 Mayer SF, Ducrey J, Dupasquier J, Haeni L, Rothen-Rutishauser B, Yang J, Fennouri A, Mayer M. Targeting specific membranes with an azide derivative of the pore-forming peptide ceratotoxin A. Biochimica Et Biophysica Acta. Biomembranes. PMID 31325418 DOI: 10.1016/j.bbamem.2019.07.011  1
2019 Kim YH, Leriche G, Diraviyam K, Koyanagi T, Gao K, Onofrei D, Patterson J, Guha A, Gianneschi N, Holland GP, Gilson MK, Mayer M, Sept D, Yang J. Entropic effects enable life at extreme temperatures. Science Advances. 5: eaaw4783. PMID 31049402 DOI: 10.1126/sciadv.aaw4783  1
2019 Eggenberger O, Leriche G, Koyanagi T, Ying C, Houghtaling J, Schroeder T, Yang J, Li J, Hall AR, Mayer M. Fluid surface coatings for solid-state nanopores: comparison of phospholipid bilayers and archaea-Inspired lipid monolayers. Nanotechnology. PMID 30991368 DOI: 10.1088/1361-6528/ab19e6  1
2018 Do JP, Cao KJ, Wei S, Laurent LC, Parast MM, Yang J. Identification of Patients with Preeclampsia by Measuring Fluorescence of an Amyloid-Binding Aryl Cyano Amide in Human Urine Samples. Analytical Chemistry. PMID 30444965 DOI: 10.1021/acs.analchem.8b03649  0.32
2018 Lee JY, Nam JH, Nam Y, Nam HY, Yoon G, Ko E, Kim SB, Bautista MR, Capule CC, Koyanagi T, Leriche G, Choi HG, Yang J, Kim J, Hoe HS. The small molecule CA140 inhibits the neuroinflammatory response in wild-type mice and a mouse model of AD. Journal of Neuroinflammation. 15: 286. PMID 30309372 DOI: 10.1186/s12974-018-1321-3  1
2018 Cifelli JL, Capule C, Yang J. Non-covalent, electrostatic interactions induce positively cooperative binding of small molecules to Alzheimer's and Parkinson's disease-related amyloids. Acs Chemical Neuroscience. PMID 30044911 DOI: 10.1021/acschemneuro.8b00280  0.56
2018 Cao KJ, Yang J. Translational opportunities for amyloid-targeting fluorophores. Chemical Communications (Cambridge, England). PMID 29993065 DOI: 10.1039/c8cc03619e  0.32
2018 Cao KJ, Elbel KM, Cifelli JL, Cirera J, Sigurdson CJ, Paesani F, Theodorakis EA, Yang J. Solvation-Guided Design of Fluorescent Probes for Discrimination of Amyloids. Scientific Reports. 8: 6950. PMID 29725045 DOI: 10.1038/s41598-018-25131-2  0.56
2017 Kim YH, Hang L, Cifelli JL, Sept D, Mayer M, Yang J. Frequency-based analysis of gramicidin A nanopores enable detection of small molecules with picomolar sensitivity. Analytical Chemistry. PMID 29266927 DOI: 10.1021/acs.analchem.7b02961  1
2017 Schroeder TBH, Guha A, Lamoureux A, VanRenterghem G, Sept D, Shtein M, Yang J, Mayer M. An electric-eel-inspired soft power source from stacked hydrogels. Nature. 552: 214-218. PMID 29239354 DOI: 10.1038/nature24670  1
2017 Xiong Y, Walker K, Min X, Hale C, Tran T, Komorowski R, Yang J, Davda J, Nuanmanee N, Kemp D, Wang X, Liu H, Miller S, Lee KJ, Wang Z, et al. Long-acting MIC-1/GDF15 molecules to treat obesity: Evidence from mice to monkeys. Science Translational Medicine. 9. PMID 29046435 DOI: 10.1126/scitranslmed.aan8732  0.56
2017 Paolucci V, Leriche G, Koyanagi T, Yang J. Evaluation of tetraether lipid-based liposomal carriers for encapsulation and retention of nucleoside-based drugs. Bioorganic & Medicinal Chemistry Letters. PMID 28838688 DOI: 10.1016/j.bmcl.2017.08.032  0.48
2017 Sheik DA, Dewhurst S, Yang J. Natural Seminal Amyloids as Targets for Development of Synthetic Inhibitors of HIV Transmission. Accounts of Chemical Research. PMID 28809479 DOI: 10.1021/acs.accounts.7b00154  0.32
2017 Koyanagi T, Cifelli JL, Leriche G, Onofrei D, Holland GP, Yang J. Thiol- triggered release of intraliposomal content from liposomes made of extremophile-inspired tetraether lipids. Bioconjugate Chemistry. PMID 28708392 DOI: 10.1021/acs.bioconjchem.7b00342  0.56
2017 Koyanagi T, Cao K, Leriche G, Onofrei D, Holland G, Mayer M, Sept D, Yang J. Hybrid Lipids Inspired by Extremophiles and Eukaryotes Afford Serum Stable Membranes with Low Leakage. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 28370726 DOI: 10.1002/chem.201701378  1
2017 Leriche G, Cifelli JL, Sibucao KC, Patterson JP, Koyanagi T, Gianneschi NC, Yang J. Characterization of drug encapsulation and retention in archaea-inspired tetraether liposomes. Organic & Biomolecular Chemistry. PMID 28221378 DOI: 10.1039/c6ob02832b  0.56
2017 Sheik DA, Chamberlain JM, Brooks LR, Clark ML, Kim YH, Leriche G, Kubiak CP, Dewhurst S, Yang J. Hydrophobic Nanoparticles Reduce the β-sheet content of SEVI Amyloid Fibrils and Inhibit SEVI-Enhanced HIV Infectivity. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 28207276 DOI: 10.1021/acs.langmuir.6b04295  0.48
2016 Schroeder TB, Leriche G, Koyanagi T, Johnson MA, Haengel KN, Eggenberger OM, Wang CL, Kim YH, Diraviyam K, Sept D, Yang J, Mayer M. Effects of Lipid Tethering in Extremophile-Inspired Membranes on H(+)/OH(-) Flux at Room Temperature. Biophysical Journal. 110: 2430-2440. PMID 27276261 DOI: 10.1016/j.bpj.2016.04.044  1
2016 Koyanagi T, Leriche G, Yep A, Onofrei D, Holland GP, Mayer M, Yang J. Effect of Headgroups on Small-Ion Permeability across Archaea-Inspired Tetraether Lipid Membranes. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 27142341 DOI: 10.1002/chem.201601326  1
2016 Cifelli JL, Chung TS, Liu H, Prangkio P, Mayer M, Yang J. Benzothiazole Amphiphiles Ameliorate Amyloid-β-Related Cell Toxicity and Oxidative Stress. Acs Chemical Neuroscience. PMID 27055069 DOI: 10.1021/acschemneuro.6b00085  1
2016 Cifelli JL, Dozier L, Chung T, Patrick GN, Yang J. Benzothiazole Amphiphiles Promote the Formation of Dendritic Spines in Primary Hippocampal Neurons. The Journal of Biological Chemistry. PMID 27022020 DOI: 10.1074/jbc.M115.701482  0.56
2015 Koyanagi T, Leriche G, Onofrei D, Holland GP, Mayer M, Yang J. Cyclohexane Rings Reduce Membrane Permeability to Small Ions in Archaea-Inspired Tetraether Lipids. Angewandte Chemie (International Ed. in English). PMID 26695717 DOI: 10.1002/anie.201510445  1
2015 Leriche G, Chen AC, Kim S, Selkoe DJ, Yang J. A Fluorescent Analog of Batimastat Enables Imaging of α-Secretase in Living Cells. Acs Chemical Neuroscience. PMID 26559179 DOI: 10.1021/acschemneuro.5b00283  1
2015 Veccharelli KM, Tong VK, Young JL, Yang J, Gianneschi NC. Dual responsive polymeric nanoparticles prepared by direct functionalization of polylactic acid-based polymers via graft-from ring opening metathesis polymerization. Chemical Communications (Cambridge, England). PMID 26541981 DOI: 10.1039/c5cc07882b  1
2015 Cole CM, Brea RJ, Kim YH, Hardy MD, Yang J, Devaraj NK. Spontaneous Reconstitution of Functional Transmembrane Proteins During Bioorthogonal Phospholipid Membrane Synthesis. Angewandte Chemie (International Ed. in English). 54: 12738-42. PMID 26316292 DOI: 10.1002/anie.201504339  1
2015 Guan Y, Cao KJ, Cantlon A, Elbel K, Theodorakis EA, Walsh DM, Yang J, Shah JV. Real-Time Monitoring of Alzheimer's-Related Amyloid Aggregation via Probe Enhancement-Fluorescence Correlation Spectroscopy. Acs Chemical Neuroscience. PMID 26212450 DOI: 10.1021/acschemneuro.5b00176  1
2015 Sheik DA, Brooks L, Frantzen K, Dewhurst S, Yang J. Inhibition of the enhancement of infection of human immunodeficiency virus by semen-derived enhancer of virus infection using amyloid-targeting polymeric nanoparticles. Acs Nano. 9: 1829-36. PMID 25619867 DOI: 10.1021/nn5067254  1
2014 Cao Y, Yang J. Development of a folate receptor (FR)-targeted indenoisoquinoline using a pH-sensitive N-ethoxybenzylimidazole (NEBI) bifunctional cross-linker. Bioconjugate Chemistry. 25: 873-8. PMID 24758386 DOI: 10.1021/bc500146p  1
2014 Song JM, DiBattista AM, Sung YM, Ahn JM, Turner RS, Yang J, Pak DT, Lee HK, Hoe HS. A tetra(ethylene glycol) derivative of benzothiazole aniline ameliorates dendritic spine density and cognitive function in a mouse model of Alzheimer's disease. Experimental Neurology. 252: 105-13. PMID 24316432 DOI: 10.1016/j.expneurol.2013.11.023  1
2013 Mayer M, Yang J. Engineered ion channels as emerging tools for chemical biology. Accounts of Chemical Research. 46: 2998-3008. PMID 23932142 DOI: 10.1021/ar400129t  1
2013 Megill A, Lee T, DiBattista AM, Song JM, Spitzer MH, Rubinshtein M, Habib LK, Capule CC, Mayer M, Turner RS, Kirkwood A, Yang J, Pak DT, Lee HK, Hoe HS. A tetra(ethylene glycol) derivative of benzothiazole aniline enhances Ras-mediated spinogenesis. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 9306-18. PMID 23719799 DOI: 10.1523/JNEUROSCI.1615-12.2013  1
2012 Prangkio P, Yusko EC, Sept D, Yang J, Mayer M. Multivariate analyses of amyloid-beta oligomer populations indicate a connection between pore formation and cytotoxicity. Plos One. 7: e47261. PMID 23077580 DOI: 10.1371/journal.pone.0047261  1
2012 Cao K, Farahi M, Dakanali M, Chang WM, Sigurdson CJ, Theodorakis EA, Yang J. Aminonaphthalene 2-cyanoacrylate (ANCA) probes fluorescently discriminate between amyloid-β and prion plaques in brain. Journal of the American Chemical Society. 134: 17338-41. PMID 22866977 DOI: 10.1021/ja3063698  1
2012 Yang J. Stimuli-responsive drug delivery systems. Advanced Drug Delivery Reviews. 64: 965-6. PMID 22580333 DOI: 10.1016/j.addr.2012.05.003  1
2012 Capule CC, Yang J. Enzyme-linked immunosorbent assay-based method to quantify the association of small molecules with aggregated amyloid peptides. Analytical Chemistry. 84: 1786-91. PMID 22243436 DOI: 10.1021/ac2030859  1
2012 Capule CC, Brown C, Olsen JS, Dewhurst S, Yang J. Oligovalent amyloid-binding agents reduce SEVI-mediated enhancement of HIV-1 infection. Journal of the American Chemical Society. 134: 905-8. PMID 22239120 DOI: 10.1021/ja210931b  1
2011 Prangkio P, Rao DK, Lance KD, Rubinshtein M, Yang J, Mayer M. Self-assembled, cation-selective ion channels from an oligo(ethylene glycol) derivative of benzothiazole aniline. Biochimica Et Biophysica Acta. 1808: 2877-85. PMID 21889925 DOI: 10.1016/j.bbamem.2011.08.024  1
2011 Chang WM, Dakanali M, Capule CC, Sigurdson CJ, Yang J, Theodorakis EA. ANCA: A Family of Fluorescent Probes that Bind and Stain Amyloid Plaques in Human Tissue. Acs Chemical Neuroscience. 2: 249-255. PMID 21743829 DOI: 10.1021/cn200018v  1
2011 Macrae MX, Schlamadinger D, Kim JE, Mayer M, Yang J. Using charge to control the functional properties of self-assembled nanopores in membranes. Small (Weinheim An Der Bergstrasse, Germany). 7: 2016-20. PMID 21626687 DOI: 10.1002/smll.201100394  1
2011 Mohamed T, Zhao X, Habib LK, Yang J, Rao PP. Design, synthesis and structure-activity relationship (SAR) studies of 2,4-disubstituted pyrimidine derivatives: dual activity as cholinesterase and Aβ-aggregation inhibitors. Bioorganic & Medicinal Chemistry. 19: 2269-81. PMID 21429752 DOI: 10.1016/j.bmc.2011.02.030  1
2011 Yusko EC, Johnson JM, Majd S, Prangkio P, Rollings RC, Li J, Yang J, Mayer M. Controlling protein translocation through nanopores with bio-inspired fluid walls. Nature Nanotechnology. 6: 253-60. PMID 21336266 DOI: 10.1038/nnano.2011.12  1
2010 Rokitskaya TI, Macrae MX, Blake S, Egorova NS, Kotova EA, Yang J, Antonenko YN. Mechanistic insight into gramicidin-based detection of protein-ligand interactions via sensitized photoinactivation. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 22: 454118. PMID 21339605 DOI: 10.1088/0953-8984/22/45/454118  1
2010 Zhao X, Yang J. Amyloid-β peptide is a substrate of the human 20S proteasome. Acs Chemical Neuroscience. 1: 655-660. PMID 21116456 DOI: 10.1021/cn100067e  1
2010 Habib LK, Lee MT, Yang J. Inhibitors of catalase-amyloid interactions protect cells from beta-amyloid-induced oxidative stress and toxicity. The Journal of Biological Chemistry. 285: 38933-43. PMID 20923778 DOI: 10.1074/jbc.M110.132860  1
2010 Olsen JS, Brown C, Capule CC, Rubinshtein M, Doran TM, Srivastava RK, Feng C, Nilsson BL, Yang J, Dewhurst S. Amyloid-binding small molecules efficiently block SEVI (semen-derived enhancer of virus infection)- and semen-mediated enhancement of HIV-1 infection. The Journal of Biological Chemistry. 285: 35488-96. PMID 20833717 DOI: 10.1074/jbc.M110.163659  1
2010 Luong A, Issarapanichkit T, Kong SD, Fong R, Yang J. pH-Sensitive, N-ethoxybenzylimidazole (NEBI) bifunctional crosslinkers enable triggered release of therapeutics from drug delivery carriers. Organic & Biomolecular Chemistry. 8: 5105-9. PMID 20820656 DOI: 10.1039/c0ob00228c  1
2010 Rubinshtein M, James CR, Young JL, Ma YJ, Kobayashi Y, Gianneschi NC, Yang J. Facile procedure for generating side chain functionalized poly(alpha-hydroxy acid) copolymers from aldehydes via a versatile Passerini-type condensation. Organic Letters. 12: 3560-3. PMID 20608664 DOI: 10.1021/ol101433v  1
2010 Majd S, Yusko EC, Billeh YN, Macrae MX, Yang J, Mayer M. Applications of biological pores in nanomedicine, sensing, and nanoelectronics. Current Opinion in Biotechnology. 21: 439-76. PMID 20561776 DOI: 10.1016/j.copbio.2010.05.002  1
2010 Macrae MX, Blake S, Mayer M, Yang J. Nanoscale ionic diodes with tunable and switchable rectifying behavior. Journal of the American Chemical Society. 132: 1766-7. PMID 20095553 DOI: 10.1021/ja909876h  1
2010 Sutharsan J, Dakanali M, Capule CC, Haidekker MA, Yang J, Theodorakis EA. Rational design of amyloid binding agents based on the molecular rotor motif. Chemmedchem. 5: 56-60. PMID 20024978 DOI: 10.1002/cmdc.200900440  1
2009 Majd S, Yusko EC, MacBriar AD, Yang J, Mayer M. Gramicidin pores report the activity of membrane-active enzymes. Journal of the American Chemical Society. 131: 16119-26. PMID 19886696 DOI: 10.1021/ja904072s  1
2009 Macrae MX, Blake S, Jiang X, Capone R, Estes DJ, Mayer M, Yang J. A semi-synthetic ion channel platform for detection of phosphatase and protease activity. Acs Nano. 3: 3567-80. PMID 19860382 DOI: 10.1021/nn901231h  1
2009 Bilgiçer B, Thomas SW, Shaw BF, Kaufman GK, Krishnamurthy VM, Estroff LA, Yang J, Whitesides GM. A non-chromatographic method for the purification of a bivalently active monoclonal IgG antibody from biological fluids. Journal of the American Chemical Society. 131: 9361-7. PMID 19534466 DOI: 10.1021/ja9023836  1
2009 Capone R, Quiroz FG, Prangkio P, Saluja I, Sauer AM, Bautista MR, Turner RS, Yang J, Mayer M. Amyloid-beta-induced ion flux in artificial lipid bilayers and neuronal cells: resolving a controversy. Neurotoxicity Research. 16: 1-13. PMID 19526294 DOI: 10.1007/s12640-009-9033-1  1
2008 Blake S, Capone R, Mayer M, Yang J. Chemically reactive derivatives of gramicidin A for developing ion channel-based nanoprobes. Bioconjugate Chemistry. 19: 1614-24. PMID 18630940 DOI: 10.1021/bc800180z  1
2008 Inbar P, Bautista MR, Takayama SA, Yang J. Assay to screen for molecules that associate with Alzheimer's related beta-amyloid fibrils. Analytical Chemistry. 80: 3502-6. PMID 18380488 DOI: 10.1021/ac702592f  1
2008 Mayer M, Semetey V, Gitlin I, Yang J, Whitesides GM. Using ion channel-forming peptides to quantify protein-ligand interactions. Journal of the American Chemical Society. 130: 1453-65. PMID 18179217 DOI: 10.1021/ja077555f  1
2007 Capone R, Blake S, Restrepo MR, Yang J, Mayer M. Designing nanosensors based on charged derivatives of gramicidin A. Journal of the American Chemical Society. 129: 9737-45. PMID 17625848 DOI: 10.1021/ja0711819  1
2007 Kong SD, Luong A, Manorek G, Howell SB, Yang J. Acidic hydrolysis of N-Ethoxybenzylimidazoles (NEBIs): potential applications as pH-sensitive linkers for drug delivery. Bioconjugate Chemistry. 18: 293-6. PMID 17261055 DOI: 10.1021/bc060224s  0.52
2006 Inbar P, Li CQ, Takayama SA, Bautista MR, Yang J. Oligo(ethylene glycol) derivatives of thioflavin T as inhibitors of protein-amyloid interactions. Chembiochem : a European Journal of Chemical Biology. 7: 1563-6. PMID 16927253 DOI: 10.1002/cbic.200600119  1
2006 Blake S, Mayer T, Mayer M, Yang J. Monitoring chemical reactions by using ion-channel-forming peptides. Chembiochem : a European Journal of Chemical Biology. 7: 433-5. PMID 16444770 DOI: 10.1002/cbic.200500532  1
2006 Inbar P, Yang J. Inhibiting protein-amyloid interactions with small molecules: a surface chemistry approach. Bioorganic & Medicinal Chemistry Letters. 16: 1076-9. PMID 16290147 DOI: 10.1016/j.bmcl.2005.10.067  1
2005 Weibel DB, Lee A, Mayer M, Brady SF, Bruzewicz D, Yang J, Diluzio WR, Clardy J, Whitesides GM. Bacterial printing press that regenerates its ink: contact-printing bacteria using hydrogel stamps. Langmuir : the Acs Journal of Surfaces and Colloids. 21: 6436-42. PMID 15982051 DOI: 10.1021/la047173c  1
2005 Gudiksen KL, Gitlin I, Yang J, Urbach AR, Moustakas DT, Whitesides GM. Eliminating positively charged lysine epsilon-NH3+ groups on the surface of carbonic anhydrase has no significant influence on its folding from sodium dodecyl sulfate. Journal of the American Chemical Society. 127: 4707-14. PMID 15796537 DOI: 10.1021/ja043804d  1
2004 Gudiksen KL, Urbach AR, Gitlin I, Yang J, Vazquez JA, Costello CE, Whitesides GM. Influence of the Zn(II) cofactor on the refolding of bovine carbonic anhydrase after denaturation with sodium dodecyl sulfate. Analytical Chemistry. 76: 7151-61. PMID 15595855 DOI: 10.1021/ac0488560  1
2004 Mayer M, Yang J, Gitlin I, Gracias DH, Whitesides GM. Micropatterned agarose gels for stamping arrays of proteins and gradients of proteins. Proteomics. 4: 2366-76. PMID 15274132 DOI: 10.1002/pmic.200300748  1
2004 Yang J, Mayer M, Kriebel JK, Garstecki P, Whitesides GM. Self-assembled aggregates of IgGs as templates for the growth of clusters of gold nanoparticles. Angewandte Chemie (International Ed. in English). 43: 1555-8. PMID 15022232 DOI: 10.1002/anie.200353161  1
2003 Yang J, Gitlin I, Krishnamurthy VM, Vazquez JA, Costello CE, Whitesides GM. Synthesis of monodisperse polymers from proteins. Journal of the American Chemical Society. 125: 12392-3. PMID 14531666 DOI: 10.1021/ja035978l  1
2002 Yang J, Gabriele B, Belvedere S, Huang Y, Breslow R. Catalytic oxidations of steroid substrates by artificial cytochrome p-450 enzymes. The Journal of Organic Chemistry. 67: 5057-67. PMID 12126389 DOI: 10.1021/jo020174u  1
2002 Yang J, Leung DK. Facile synthesis of beta-cyclodextrin dithiols. Bioorganic & Medicinal Chemistry Letters. 12: 169-70. PMID 11755346 DOI: 10.1016/S0960-894X(01)00708-9  1
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