Yi Lu - Publications

Affiliations: 
University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
metalloproteins, DNAzymes, nanomaterials
Website:
http://www.chemistry.illinois.edu/faculty/Yi_Lu.html

298 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Shen GL, Lu Y, Liang L, Lu WF, Diao YK, Xiao ZQ, Zhang KJ, Zhang JG, Zhang CW, Liu J. Impact of diabetes mellitus on the long-term prognosis of patients with hepatocellular carcinoma after hepatectomy. Expert Review of Gastroenterology & Hepatology. 1-6. PMID 35387530 DOI: 10.1080/17474124.2022.2063837  0.33
2021 McGhee CE, Yang Z, Guo W, Wu Y, Lyu M, DeLong CJ, Hong S, Ma Y, McInnis MG, O'Shea KS, Lu Y. DNAzyme-Based Lithium-Selective Imaging Reveals Higher Lithium Accumulation in Bipolar Disorder Patient-Derived Neurons. Acs Central Science. 7: 1809-1820. PMID 34841055 DOI: 10.1021/acscentsci.1c00843  0.555
2021 Lyu M, Kong L, Yang Z, Wu Y, McGhee CE, Lu Y. PNA-Assisted DNAzymes to Cleave Double-Stranded DNA for Genetic Engineering with High Sequence Fidelity. Journal of the American Chemical Society. PMID 34156847 DOI: 10.1021/jacs.1c03129  0.569
2021 Tian S, Fan R, Albert T, Khade RL, Dai H, Harnden KA, Hosseinzadeh P, Liu J, Nilges MJ, Zhang Y, Moënne-Loccoz P, Guo Y, Lu Y. Stepwise nitrosylation of the nonheme iron site in an engineered azurin and a molecular basis for nitric oxide signaling mediated by nonheme iron proteins. Chemical Science. 12: 6569-6579. PMID 34040732 DOI: 10.1039/d1sc00364j  0.739
2020 Bai Y, Xing H, Bai Y, Tan LH, Hwang K, Li J, Lu Y, Zimmerman SC. Independent control over size, valence, and elemental composition in the synthesis of DNA-nanoparticle conjugates. Chemical Science. 11: 1564-1572. PMID 34084387 DOI: 10.1039/c9sc05656d  0.572
2020 Yu SS, Li JJ, Cui C, Tian S, Chen JJ, Yu HQ, Hou C, Nilges MJ, Lu Y. Structural Basis for a Quadratic Relationship between Electronic Absorption and Electronic Paramagnetic Resonance Parameters of Type 1 Copper Proteins. Inorganic Chemistry. PMID 32689800 DOI: 10.1021/Acs.Inorgchem.0C01065  0.809
2020 Mirts EN, Dikanov SA, Jose A, Solomon EI, Lu Y. A Binuclear Cu Center Designed in an All α-Helical Protein Scaffold. Journal of the American Chemical Society. PMID 32662996 DOI: 10.1021/Jacs.0C04226  0.541
2020 Wang Z, Lu Y. Functional DNA directed assembly of nanomaterials for biosensing. Journal of Materials Chemistry. 19. PMID 24307758 DOI: 10.1039/B813939C  0.349
2020 Bai Y, Xing H, Bai Y, Tan LH, Hwang K, Li J, Lu Y, Zimmerman SC. Independent control over size, valence, and elemental composition in the synthesis of DNA–nanoparticle conjugates Chemical Science. 11: 1564-1572. DOI: 10.1039/C9Sc05656D  0.577
2019 Lu Y. DNAzyme-Mediated Genetically Encoded Sensors for Ratiometric Imaging of Metal Ions in Living Cells. Angewandte Chemie (International Ed. in English). PMID 31746514 DOI: 10.1002/Anie.201912514  0.375
2019 Lake RJ, Yang Z, Zhang J, Lu Y. DNAzymes as Activity-Based Sensors for Metal Ions: Recent Applications, Demonstrated Advantages, Current Challenges, and Future Directions. Accounts of Chemical Research. PMID 31721559 DOI: 10.1021/Acs.Accounts.9B00419  0.367
2019 Lin Y, Yang Z, Lake RJ, Zheng C, Lu Y. Enzyme-Mediated Endogenous and Bioorthogonal Control of a DNAzyme Fluorescent Sensor for Imaging Metal Ions in Living Cells. Angewandte Chemie (International Ed. in English). PMID 31529664 DOI: 10.1002/Anie.201910343  0.363
2019 Li L, Xing H, Zhang J, Lu Y. Functional DNA Molecules Enable Selective and Stimuli-Responsive Nanoparticles for Biomedical Applications. Accounts of Chemical Research. PMID 31411853 DOI: 10.1021/Acs.Accounts.9B00167  0.614
2019 Hwang K, Mou Q, Lake RJ, Xiong M, Holland B, Lu Y. Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors. Inorganic Chemistry. PMID 31364355 DOI: 10.1021/Acs.Inorgchem.9B01280  0.355
2019 Satyavolu NSR, Loh KY, Tan LH, Lu Y. Discovery of and Insights into DNA "Codes" for Tunable Morphologies of Metal Nanoparticles. Small (Weinheim An Der Bergstrasse, Germany). e1900975. PMID 31074939 DOI: 10.1002/Smll.201900975  0.779
2019 Mirts EN, Bhagi-Damodaran A, Lu Y. Understanding and Modulating Metalloenzymes with Unnatural Amino Acids, Non-Native Metal Ions, and Non-Native Metallocofactors. Accounts of Chemical Research. PMID 30912643 DOI: 10.1021/Acs.Accounts.9B00011  0.826
2019 Dikanov SA, Berry SM, Lu Y. HYSCORE Insights into the Distribution of the Unpaired Spin Density in an Engineered Cu Site in Azurin and Its His120Gly Variant. Inorganic Chemistry. PMID 30869885 DOI: 10.1021/Acs.Inorgchem.8B03604  0.784
2019 Zhang J, Lu Y. Advancing Point-of-Care Diagnostics of Metabolites Through Engineering Semisynthetic Proteins. Clinical Chemistry. PMID 30737207 DOI: 10.1373/Clinchem.2018.298836  0.31
2019 Lu Y. New transition-metal-dependent DNAzymes as efficient endonucleases and as selective metal biosensors. Chemistry (Weinheim An Der Bergstrasse, Germany). 8: 4588-96. PMID 12362396 DOI: 10.1002/1521-3765(20021018)8:20<4588::Aid-Chem4588>3.0.Co;2-Q  0.377
2018 Sabuncu S, Reed JH, Lu Y, Moënne-Loccoz P. Nitric oxide reductase activity in heme-nonheme binuclear engineered myoglobins through a one-electron reduction cycle. Journal of the American Chemical Society. PMID 30512937 DOI: 10.1021/Jacs.8B11037  0.37
2018 Yang Z, Loh KY, Chu YT, Feng R, Satyavolu NSR, Xiong M, Huynh SMN, Hwang K, Li L, Xing H, Zhang X, Chemla YR, Gruebele M, Lu Y. Optical control of metal ion probes in cells and zebrafish using highly selective DNAzymes conjugated to upconversion nanoparticles. Journal of the American Chemical Society. PMID 30427666 DOI: 10.1021/Jacs.8B09867  0.801
2018 Mirts EN, Petrik ID, Hosseinzadeh P, Nilges MJ, Lu Y. A designed heme-[4Fe-4S] metalloenzyme catalyzes sulfite reduction like the native enzyme. Science (New York, N.Y.). 361: 1098-1101. PMID 30213908 DOI: 10.1126/Science.Aat8474  0.336
2018 Bhagi-Damodaran A, Reed JH, Zhu Q, Shi Y, Hosseinzadeh P, Sandoval BA, Harnden KA, Wang S, Sponholtz MR, Mirts EN, Dwaraknath S, Zhang Y, Moënne-Loccoz P, Lu Y. Heme redox potentials hold the key to reactivity differences between nitric oxide reductase and heme-copper oxidase. Proceedings of the National Academy of Sciences of the United States of America. PMID 29802230 DOI: 10.1073/Pnas.1720298115  0.811
2018 Zhang J, Xing H, Lu Y. Translating molecular detections into a simple temperature test using a target-responsive smart thermometer. Chemical Science. 9: 3906-3910. PMID 29780521 DOI: 10.1039/C7Sc05325H  0.605
2018 Cepeda-Plaza M, McGhee C, Lu Y. Evidence of a General Acid/Base Catalysis Mechanism in the 8-17 DNAzyme. Biochemistry. PMID 29389111 DOI: 10.1021/Acs.Biochem.7B01096  0.619
2018 Mukherjee S, Mukherjee M, Mukherjee A, Bhagi-Damodaran A, Lu Y, Dey A. O2 Reduction by Biosynthetic Models of Cytochrome c Oxidase: Insights into Role of Proton Transfer Residues from Perturbed Active Sites Models of CcO Acs Catalysis. 8: 8915-8924. DOI: 10.1021/Acscatal.8B02240  0.798
2017 Zhao J, Gao J, Xue W, Di Z, Xing H, Lu Y, Li L. Upconversion Luminescence-Activated DNA Nanodevice for ATP Sensing in Living Cells. Journal of the American Chemical Society. PMID 29281270 DOI: 10.1021/Jacs.7B11161  0.621
2017 Wang P, Chen K, Liu Q, Wang HW, Azam M, Al-Resayes SI, Lu Y, Sun WY. Fine tuning of catalytic and sorption properties of metal-organic frameworks via in situ ligand exchange. Dalton Transactions (Cambridge, England : 2003). PMID 28813058 DOI: 10.1039/C7Dt02231J  0.332
2017 Cohen MR, Mendelman N, Radoul M, Wilson TD, Savelieff MG, Zimmermann H, Kaminker I, Feintuch A, Lu Y, Goldfarb D. Correction to Thiolate Spin Population of Type I Copper in Azurin Derived from (33)S Hyperfine Coupling. Inorganic Chemistry. PMID 28776989 DOI: 10.1021/Acs.Inorgchem.7B01753  0.726
2017 Reed JH, Shi Y, Zhu Q, Chakraborty S, Mirts EN, Petrik ID, Bhagi-Damodaran A, Ross M, Moënne-Loccoz P, Zhang Y, Lu Y. Manganese and Cobalt in the Nonheme Metal-binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-inactive Mechanism. Journal of the American Chemical Society. PMID 28768416 DOI: 10.1021/Jacs.7B05800  0.824
2017 Xiong F, Lu L, Sun TY, Wu Q, Yan D, Chen Y, Zhang X, Wei W, Lu Y, Sun WY, Li JJ, Zhao J. A bioinspired and biocompatible ortho-sulfiliminyl phenol synthesis. Nature Communications. 8: 15912. PMID 28627513 DOI: 10.1038/Ncomms15912  0.302
2017 Wu Z, Fan H, Satyavolu NSR, Wang W, Lake R, Jiang JH, Lu Y. Imaging Endogenous Metal Ions in Living Cells Using a DNAzyme-Catalytic Hairpin Assembly Probe. Angewandte Chemie (International Ed. in English). PMID 28557357 DOI: 10.1002/Anie.201703540  0.343
2017 Ramirez Cohen M, Mendelman N, Radoul M, Wilson TD, Savelieff MG, Zimmermann H, Kaminker I, Feintuch A, Lu Y, Goldfarb D. Thiolate Spin Population of Type I Copper in Azurin Derived from (33)S Hyperfine Coupling. Inorganic Chemistry. PMID 28509562 DOI: 10.1021/Acs.Inorgchem.7B00167  0.766
2017 Wang W, Satyavolu NSR, Wu Z, Zhang JR, Zhu JJ, Lu Y. Near-Infrared Photothermally Activated DNAzyme-Gold Nanoshells for Imaging Metal Ions in Living Cells. Angewandte Chemie (International Ed. in English). PMID 28471018 DOI: 10.1002/Anie.201701325  0.353
2017 Bhagi-Damodaran A, Kahle M, Shi Y, Zhang Y, Ädelroth P, Lu Y. Insights Into How Heme Reduction Potentials Modulate Enzymatic Activities of a Myoglobin-based Functional Oxidase. Angewandte Chemie (International Ed. in English). PMID 28470988 DOI: 10.1002/Anie.201701916  0.791
2017 McGhee CE, Loh KY, Lu Y. DNAzyme sensors for detection of metal ions in the environment and imaging them in living cells. Current Opinion in Biotechnology. 45: 191-201. PMID 28458112 DOI: 10.1016/J.Copbio.2017.03.002  0.796
2017 Mazumdar D, Lan T, Lu Y. "Dipstick" Colorimetric Detection of Metal Ions Based on Immobilization of DNAzyme and Gold Nanoparticles onto a Lateral Flow Device. Methods in Molecular Biology (Clifton, N.J.). 1571: 389-406. PMID 28281269 DOI: 10.1007/978-1-4939-6848-0_24  0.601
2017 Xing H, Bai Y, Bai Y, Tan LH, Tao J, Pedretti B, Vincil GA, Lu Y, Zimmerman SC. Bottom-Up Strategy To Prepare Nanoparticles with a Single DNA Strand. Journal of the American Chemical Society. PMID 28263067 DOI: 10.1021/Jacs.7B00065  0.62
2017 Bhagi-Damodaran A, Michael MA, Zhu Q, Reed J, Sandoval BA, Mirts EN, Chakraborty S, Moënne-Loccoz P, Zhang Y, Lu Y. Why copper is preferred over iron for oxygen activation and reduction in haem-copper oxidases. Nature Chemistry. 9: 257-263. PMID 28221360 DOI: 10.1038/Nchem.2643  0.819
2016 Bhagi-Damodaran A, Petrik I, Lu Y. Using Biosynthetic Models of Heme-Copper Oxidase and Nitric Oxide Reductase in Myoglobin to Elucidate Structural Features Responsible for Enzymatic Activities. Israel Journal of Chemistry. 56: 773-790. PMID 27994254 DOI: 10.1002/Ijch.201600033  0.811
2016 Clark KM, Tian S, van der Donk WA, Lu Y. Probing the role of the backbone carbonyl interaction with the CuA center in azurin by replacing the peptide bond with an ester linkage. Chemical Communications (Cambridge, England). PMID 27918029 DOI: 10.1039/C6Cc07274G  0.775
2016 Zhang J, Cheng F, Li J, Zhu JJ, Lu Y. Fluorescent nanoprobes for sensing and imaging of metal ions: recent advances and future perspectives. Nano Today. 11: 309-329. PMID 27818705 DOI: 10.1016/J.Nantod.2016.05.010  0.327
2016 Yu Y, Petrik I, Chacón KN, Hosseinzadeh P, Chen H, Blackburn NJ, Lu Y. Effect of Circular Permutation on the Structure and Function of Type 1 Blue Copper Center in Azurin. Protein Science : a Publication of the Protein Society. PMID 27759897 DOI: 10.1002/Pro.3071  0.352
2016 Hwang K, Hosseinzadeh P, Lu Y. Biochemical and Biophysical Understanding of Metal Ion Selectivity of DNAzymes. Inorganica Chimica Acta. 452: 12-24. PMID 27695134 DOI: 10.1016/J.Ica.2016.04.017  0.343
2016 Bhagi-Damodaran A, Hosseinzadeh P, Mirts E, Reed J, Petrik ID, Lu Y. Design of Heteronuclear Metalloenzymes. Methods in Enzymology. 580: 501-37. PMID 27586347 DOI: 10.1016/Bs.Mie.2016.05.050  0.818
2016 Bai Y, Feng X, Xing H, Xu Y, Kim BK, Baig N, Zhou T, Gewirth AA, Lu Y, Oldfield E, Zimmerman SC. A Highly Efficient Single-Chain Metal-Organic Nanoparticle Catalyst for Alkyne-Azide "Click" Reactions in Water and in Cells. Journal of the American Chemical Society. PMID 27529791 DOI: 10.1021/Jacs.6B04477  0.643
2016 Xing H, Hwang K, Lu Y. Recent Developments of Liposomes as Nanocarriers for Theranostic Applications. Theranostics. 6: 1336-52. PMID 27375783 DOI: 10.7150/Thno.15464  0.616
2016 Nastri F, Chino M, Maglio O, Bhagi-Damodaran A, Lu Y, Lombardi A. Design and engineering of artificial oxygen-activating metalloenzymes. Chemical Society Reviews. PMID 27341693 DOI: 10.1039/C5Cs00923E  0.794
2016 Tian S, Liu J, Cowley RE, Hosseinzadeh P, Marshall NM, Yu Y, Robinson H, Nilges MJ, Blackburn NJ, Solomon EI, Lu Y. Reversible S-nitrosylation in an engineered azurin. Nature Chemistry. 8: 670-7. PMID 27325093 DOI: 10.1038/Nchem.2489  0.807
2016 Xing H, Li J, Xu W, Hwang K, Wu P, Yin Q, Li Z, Cheng J, Lu Y. The Effects of Spacer Length and Composition on Aptamer-Mediated Cell-Specific Targeting with Nanoscale PEGylated Liposomal Doxorubicin. Chembiochem : a European Journal of Chemical Biology. PMID 27123758 DOI: 10.1002/Cbic.201600092  0.604
2016 Hosseinzadeh P, Tian S, Marshall NM, Hemp J, Mullen T, Nilges MJ, Gao YG, Robinson H, Stahl DA, Gennis RB, Lu Y. A Purple Cupredoxin from Nitrosopumilus maritimus Containing a Mononuclear Type 1 Copper Center with an Open Binding Site. Journal of the American Chemical Society. PMID 27120678 DOI: 10.1021/Jacs.5B13128  0.809
2016 Matsumura H, Chakraborty S, Reed J, Lu Y, Moënne-Loccoz P. Effect of outer-sphere sidechain substitutions on the fate of the trans iron-nitrosyl dimer in heme/nonheme engineered myoglobins (FeBMbs): Insights into the mechanism of denitrifying NO reductases. Biochemistry. PMID 27003474 DOI: 10.1021/Acs.Biochem.5B01109  0.345
2016 Chauhan S, Hosseinzadeh P, Lu Y, Blackburn NJ. Stopped-Flow Studies of the Reduction of the Copper Centers Suggest a Bifurcated Electron Transfer Pathway in Peptidylglycine Monooxygenase. Biochemistry. PMID 26982589 DOI: 10.1021/Acs.Biochem.6B00061  0.307
2016 Hosseinzadeh P, Mirts EN, Pfister TD, Gao YG, Mayne C, Robinson H, Tajkhorshid E, Lu Y. Enhancing Mn(II)-binding and manganese peroxidase activity in a designed cytochrome c peroxidase through fine-tuning secondary sphere interactions. Biochemistry. PMID 26885726 DOI: 10.1021/Acs.Biochem.5B01299  0.701
2016 Xing H, Zhang CL, Ruan G, Zhang JJ, Hwang K, Lu Y. Multimodal Detection of a Small Molecule Target Using Stimuli-Responsive Liposome Triggered by Aptamer-Enzyme Conjugate. Analytical Chemistry. PMID 26750765 DOI: 10.1021/Acs.Analchem.5B04031  0.611
2016 Yu Y, Cui C, Wang J, Lu Y. Biosynthetic approach to modeling and understanding metalloproteins using unnatural amino acids Science China Chemistry. 60: 188-200. DOI: 10.1007/S11426-016-0343-2  0.637
2015 Petrik ID, Davydov R, Ross M, Zhao X, Hoffman B, Lu Y. Spectroscopic and crystallographic evidence for the role of a water-containing hydrogen bonding network in oxidase activity of an engineered myoglobin. Journal of the American Chemical Society. PMID 26716352 DOI: 10.1021/Jacs.5B12004  0.731
2015 Hosseinzadeh P, Marshall NM, Chacón KN, Yu Y, Nilges MJ, New SY, Tashkov SA, Blackburn NJ, Lu Y. Design of a single protein that spans the entire 2-V range of physiological redox potentials. Proceedings of the National Academy of Sciences of the United States of America. PMID 26631748 DOI: 10.1073/Pnas.1515897112  0.664
2015 Torabi SF, Lu Y. Identification of the Same Na(+)-Specific DNAzyme Motif from Two In Vitro Selections Under Different Conditions. Journal of Molecular Evolution. PMID 26577294 DOI: 10.1007/S00239-015-9715-7  0.571
2015 Mukherjee S, Mukherjee A, Bhagi-Damodaran A, Mukherjee M, Lu Y, Dey A. A biosynthetic model of cytochrome c oxidase as an electrocatalyst for oxygen reduction. Nature Communications. 6: 8467. PMID 26455726 DOI: 10.1038/Ncomms9467  0.79
2015 Yang Y, Zhou Q, Wang L, Liu X, Zhang W, Hu M, Dong J, Li J, Xiaoxuan L, Ouyang H, Li H, Gao F, Gong W, Lu Y, Wang J. Significant Improvement of Oxidase Activity through the Genetic Incorporation of a Redox-active Unnatural Amino Acid. Chemical Science (Royal Society of Chemistry : 2010). 6: 3881-3885. PMID 26417427 DOI: 10.1039/C5Sc01126D  0.342
2015 Gao L, Li LL, Wang X, Wu P, Cao Y, Liang B, Li X, Lin Y, Lu Y, Guo X. Graphene-DNAzyme Junctions: A Platform for Direct Metal Ion Detection with Ultrahigh Sensitivity. Chemical Science (Royal Society of Chemistry : 2010). 6: 2469-2473. PMID 26417425 DOI: 10.1039/C4Sc03612C  0.367
2015 Chakraborty S, Polen MA, Chacón KN, Wilson TD, Yu Y, Reed J, Nilges MJ, Blackburn NJ, Lu Y. Binuclear CuA Formation in Biosynthetic Models of CuA in Azurin Proceeds via a Novel Cu(Cys)2His Mononuclear Copper Intermediate. Biochemistry. PMID 26352296 DOI: 10.1021/Acs.Biochem.5B00659  0.601
2015 Bhagi-Damodaran A, Lu Y. The Q, Compound Q is Finally Deciphered. Inorganic Chemistry Frontiers. 2: 824-826. PMID 26346336 DOI: 10.1039/C5Qi00117J  0.765
2015 Bai Y, Xing H, Wu P, Feng X, Hwang K, Lee JM, Phang XY, Lu Y, Zimmerman SC. Chemical Control over Cellular Uptake of Organic Nanoparticles by Fine Tuning Surface Functional Groups. Acs Nano. PMID 26327513 DOI: 10.1021/Acsnano.5B03909  0.604
2015 Yu Y, Cui C, Liu X, Petrik ID, Wang J, Lu Y. A Designed Metalloenzyme Achieving the Catalytic Rate of a Native Enzyme. Journal of the American Chemical Society. PMID 26318313 DOI: 10.1021/Jacs.5B07119  0.634
2015 Hosseinzadeh P, Lu Y. Design and fine-tuning redox potentials of metalloproteins involved in electron transfer in bioenergetics. Biochimica Et Biophysica Acta. PMID 26301482 DOI: 10.1016/J.Bbabio.2015.08.006  0.332
2015 Chakraborty S, Reed J, Sage JT, Branagan NC, Petrik ID, Miner KD, Hu MY, Zhao J, Alp EE, Lu Y. Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies. Inorganic Chemistry. PMID 26274098 DOI: 10.1021/Acs.Inorgchem.5B01105  0.629
2015 Farver O, Hosseinzadeh P, Marshall NM, Wherland S, Lu Y, Pecht I. Long-Range Electron Transfer in Engineered Azurins Exhibits Marcus Inverted Region Behavior. The Journal of Physical Chemistry Letters. 6: 100-5. PMID 26263097 DOI: 10.1021/Jz5022685  0.625
2015 Song T, Tang L, Tan LH, Wang X, Satyavolu NS, Xing H, Wang Z, Li J, Liang H, Lu Y. DNA-Encoded Tuning of Geometric and Plasmonic Properties of Nanoparticles Growing from Gold Nanorod Seeds. Angewandte Chemie (International Ed. in English). 54: 8114-8. PMID 26096755 DOI: 10.1002/Anie.201500838  0.722
2015 Torabi SF, Wu P, McGhee CE, Chen L, Hwang K, Zheng N, Cheng J, Lu Y. In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing. Proceedings of the National Academy of Sciences of the United States of America. 112: 5903-8. PMID 25918425 DOI: 10.1073/Pnas.1420361112  0.726
2015 Lim MH, Lu Y. Editorial overview: Bioinorganic chemistry: bioinorganic catalysis for renewable energy. Current Opinion in Chemical Biology. 25: vii-viii. PMID 25791681 DOI: 10.1016/J.Cbpa.2015.03.001  0.441
2015 Li N, Su X, Lu Y. Nanomaterial-based biosensors using dual transducing elements for solution phase detection. The Analyst. 140: 2916-43. PMID 25763412 DOI: 10.1039/C4An02376E  0.306
2015 Yu Y, Lv X, Li J, Zhou Q, Cui C, Hosseinzadeh P, Mukherjee A, Nilges MJ, Wang J, Lu Y. Defining the role of tyrosine and rational tuning of oxidase activity by genetic incorporation of unnatural tyrosine analogs. Journal of the American Chemical Society. 137: 4594-7. PMID 25672571 DOI: 10.1021/Ja5109936  0.629
2015 Zhang JL, Che CM, Lu Y. Jun-Long Zhang Chempluschem. 80: 25. DOI: 10.1002/Cplu.201402409  0.335
2014 Hwang K, Wu P, Kim T, Lei L, Tian S, Wang Y, Lu Y. Photocaged DNAzymes as a general method for sensing metal ions in living cells. Angewandte Chemie (International Ed. in English). 53: 13798-802. PMID 25314680 DOI: 10.1002/Anie.201408333  0.781
2014 Wu J, Tan LH, Hwang K, Xing H, Wu P, Li W, Lu Y. DNA sequence-dependent morphological evolution of silver nanoparticles and their optical and hybridization properties. Journal of the American Chemical Society. 136: 15195-202. PMID 25243485 DOI: 10.1021/Ja506150S  0.622
2014 Wu P, Yu Y, McGhee CE, Tan LH, Lu Y. Applications of synchrotron-based spectroscopic techniques in studying nucleic acids and nucleic acid-functionalized nanomaterials. Advanced Materials (Deerfield Beach, Fla.). 26: 7849-72. PMID 25205057 DOI: 10.1002/Adma.201304891  0.578
2014 Liu J, Meier KK, Tian S, Zhang JL, Guo H, Schulz CE, Robinson H, Nilges MJ, Münck E, Lu Y. Redesigning the blue copper azurin into a redox-active mononuclear nonheme iron protein: preparation and study of Fe(II)-M121E azurin. Journal of the American Chemical Society. 136: 12337-44. PMID 25082811 DOI: 10.1021/Ja505410U  0.793
2014 Bhagi-Damodaran A, Petrik ID, Marshall NM, Robinson H, Lu Y. Systematic tuning of heme redox potentials and its effects on O2 reduction rates in a designed oxidase in myoglobin. Journal of the American Chemical Society. 136: 11882-5. PMID 25076049 DOI: 10.1021/Ja5054863  0.779
2014 Miner KD, Pfister TD, Hosseinzadeh P, Karaduman N, Donald LJ, Loewen PC, Lu Y, Ivancich A. Identifying the elusive sites of tyrosyl radicals in cytochrome c peroxidase: implications for oxidation of substrates bound at a site remote from the heme. Biochemistry. 53: 3781-9. PMID 24901481 DOI: 10.1021/Bi500353P  0.763
2014 Tan LH, Xing H, Lu Y. DNA as a powerful tool for morphology control, spatial positioning, and dynamic assembly of nanoparticles. Accounts of Chemical Research. 47: 1881-90. PMID 24871359 DOI: 10.1021/Ar500081K  0.634
2014 Xing H, Hwang K, Li J, Torabi SF, Lu Y. DNA Aptamer Technology for Personalized Medicine. Current Opinion in Chemical Engineering. 4: 79-87. PMID 24791224 DOI: 10.1016/J.Coche.2014.01.007  0.696
2014 Liu J, Chakraborty S, Hosseinzadeh P, Yu Y, Tian S, Petrik I, Bhagi A, Lu Y. Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers. Chemical Reviews. 114: 4366-469. PMID 24758379 DOI: 10.1021/Cr400479B  0.779
2014 Clark KM, Yu Y, van der Donk WA, Blackburn N, Lu Y. Modulating the Copper-Sulfur Interaction in Type 1 Blue Copper Azurin by Replacing Cys112 with Nonproteinogenic Homocysteine. Inorganic Chemistry Frontiers. 1: 153-158. PMID 24707355 DOI: 10.1039/C3Qi00096F  0.391
2014 Lu Y. Uranium extraction: Coordination chemistry in the ocean Nature Chemistry. 6: 175-176. PMID 24557129 DOI: 10.1038/Nchem.1880  0.32
2014 Kaminker I, Wilson TD, Savelieff MG, Hovav Y, Zimmermann H, Lu Y, Goldfarb D. Correlating nuclear frequencies by two-dimensional ELDOR-detected NMR spectroscopy. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 240: 77-89. PMID 24530956 DOI: 10.1016/J.Jmr.2013.12.016  0.728
2014 Petrik ID, Liu J, Lu Y. Metalloenzyme design and engineering through strategic modifications of native protein scaffolds. Current Opinion in Chemical Biology. 19: 67-75. PMID 24513641 DOI: 10.1016/J.Cbpa.2014.01.006  0.319
2014 New SY, Aung KM, Lim GL, Hong S, Tan SK, Lu Y, Cheung E, Su X. Fast screening of ligand-protein interactions based on ligand-induced protein stabilization of gold nanoparticles. Analytical Chemistry. 86: 2361-70. PMID 24484401 DOI: 10.1021/Ac404241Y  0.315
2014 Chakraborty S, Reed J, Ross M, Nilges MJ, Petrik ID, Ghosh S, Hammes-Schiffer S, Sage JT, Zhang Y, Schulz CE, Lu Y. Spectroscopic and computational study of a nonheme iron nitrosyl center in a biosynthetic model of nitric oxide reductase. Angewandte Chemie (International Ed. in English). 53: 2417-21. PMID 24481708 DOI: 10.1002/Anie.201308431  0.73
2014 Torabi SF, Lu Y. Functional DNA nanomaterials for sensing and imaging in living cells. Current Opinion in Biotechnology. 28: 88-95. PMID 24468446 DOI: 10.1016/J.Copbio.2013.12.011  0.572
2014 Matsumura H, Hayashi T, Chakraborty S, Lu Y, Moënne-Loccoz P. The production of nitrous oxide by the heme/nonheme diiron center of engineered myoglobins (Fe(B)Mbs) proceeds through a trans-iron-nitrosyl dimer. Journal of the American Chemical Society. 136: 2420-31. PMID 24432820 DOI: 10.1021/Ja410542Z  0.306
2014 Sieracki NA, Tian S, Hadt RG, Zhang JL, Woertink JS, Nilges MJ, Sun F, Solomon EI, Lu Y. Copper-sulfenate complex from oxidation of a cavity mutant of Pseudomonas aeruginosa azurin. Proceedings of the National Academy of Sciences of the United States of America. 111: 924-9. PMID 24390543 DOI: 10.1073/Pnas.1316483111  0.814
2014 Yu Y, Mukherjee A, Nilges MJ, Hosseinzadeh P, Miner KD, Lu Y. Direct EPR observation of a tyrosyl radical in a functional oxidase model in myoglobin during both H2O2 and O2 reactions. Journal of the American Chemical Society. 136: 1174-7. PMID 24383850 DOI: 10.1021/Ja4091885  0.613
2014 Xiang Y, Lu Y. DNA as Sensors and Imaging Agents for Metal Ions Inorganic Chemistry. 53: 1925-1942. PMID 24359450 DOI: 10.1021/Ic4019103  0.36
2014 Xiang Y, Wu P, Tan LH, Lu Y. DNAzyme-functionalized gold nanoparticles for biosensing. Advances in Biochemical Engineering/Biotechnology. 140: 93-120. PMID 24026635 DOI: 10.1007/10_2013_242  0.301
2014 Bai Y, Xing H, Vincil GA, Lee J, Henderson EJ, Lu Y, Lemcoff NG, Zimmerman SC. Practical synthesis of water-soluble organic nanoparticles with a single reactive group and a functional carrier scaffold Chemical Science. 5: 2862-2868. DOI: 10.1039/C4Sc00700J  0.612
2014 Mazumdar D, Liu J, Lu Y. Functional Nucleic Acid-Directed Assembly of Nanomaterials and Their Applications as Colorimetric and Fluorescent Sensors for Trace Contaminants in Water Nanotechnology Applications For Clean Water: Solutions For Improving Water Quality: Second Edition. 73-92. DOI: 10.1016/B978-1-4557-3116-9.00005-6  0.488
2013 Xing H, Tang L, Yang X, Hwang K, Wang W, Yin Q, Wong NY, Dobrucki LW, Yasui N, Katzenellenbogen JA, Helferich WG, Cheng J, Lu Y. Selective Delivery of an Anticancer Drug with Aptamer-Functionalized Liposomes to Breast Cancer Cells in Vitro and in Vivo. Journal of Materials Chemistry. B, Materials For Biology and Medicine. 1: 5288-5297. PMID 24159374 DOI: 10.1039/C3Tb20412J  0.659
2013 Tan LH, Xing H, Chen H, Lu Y. Facile and efficient preparation of anisotropic DNA-functionalized gold nanoparticles and their regioselective assembly. Journal of the American Chemical Society. 135: 17675-8. PMID 24148071 DOI: 10.1021/Ja408033E  0.61
2013 Tang L, Chun IS, Wang Z, Li J, Li X, Lu Y. DNA detection using plasmonic enhanced near-infrared photoluminescence of gallium arsenide. Analytical Chemistry. 85: 9522-7. PMID 24079346 DOI: 10.1021/Ac401169C  0.487
2013 DeBerg HA, Blehm BH, Sheung J, Thompson AR, Bookwalter CS, Torabi SF, Schroer TA, Berger CL, Lu Y, Trybus KM, Selvin PR. Motor domain phosphorylation modulates kinesin-1 transport. The Journal of Biological Chemistry. 288: 32612-21. PMID 24072715 DOI: 10.1074/Jbc.M113.515510  0.516
2013 Xu W, Xing H, Lu Y. A smart T(1)-weighted MRI contrast agent for uranyl cations based on a DNAzyme-gadolinium conjugate. The Analyst. 138: 6266-9. PMID 24005082 DOI: 10.1039/C3An01182H  0.794
2013 Tsai ML, Hadt RG, Marshall NM, Wilson TD, Lu Y, Solomon EI. Axial interactions in the mixed-valent CuA active site and role of the axial methionine in electron transfer. Proceedings of the National Academy of Sciences of the United States of America. 110: 14658-63. PMID 23964128 DOI: 10.1073/Pnas.1314242110  0.781
2013 Cepeda-Plaza M, Null EL, Lu Y. Metal ion as both a cofactor and a probe of metal-binding sites in a uranyl-specific DNAzyme: a uranyl photocleavage study. Nucleic Acids Research. 41: 9361-70. PMID 23939617 DOI: 10.1093/Nar/Gkt694  0.803
2013 Chen T, Hu Y, Cen Y, Chu X, Lu Y. A dual-emission fluorescent nanocomplex of gold-cluster-decorated silica particles for live cell imaging of highly reactive oxygen species. Journal of the American Chemical Society. 135: 11595-602. PMID 23859158 DOI: 10.1021/Ja4035939  0.708
2013 Farver O, Marshall NM, Wherland S, Lu Y, Pecht I. Designed azurins show lower reorganization free energies for intraprotein electron transfer. Proceedings of the National Academy of Sciences of the United States of America. 110: 10536-40. PMID 23759745 DOI: 10.1073/Pnas.1215081110  0.657
2013 Wu P, Hwang K, Lan T, Lu Y. A DNAzyme-gold nanoparticle probe for uranyl ion in living cells. Journal of the American Chemical Society. 135: 5254-7. PMID 23531046 DOI: 10.1021/Ja400150V  0.367
2013 Wang Z, Bharathi MS, Hariharaputran R, Xing H, Tang L, Li J, Zhang YW, Lu Y. pH-dependent evolution of five-star gold nanostructures: an experimental and computational study. Acs Nano. 7: 2258-65. PMID 23442194 DOI: 10.1021/Nn305395P  0.675
2013 Wong NY, Xing H, Tan LH, Lu Y. Nano-encrypted Morse code: a versatile approach to programmable and reversible nanoscale assembly and disassembly. Journal of the American Chemical Society. 135: 2931-4. PMID 23373425 DOI: 10.1021/Ja3122284  0.619
2013 Xiang Y, Wang Z, Xing H, Lu Y. Expanding DNAzyme Functionality through Enzyme Cascades with Applications in Single Nucleotide Repair and Tunable DNA-Directed Assembly of Nanomaterials. Chemical Science (Royal Society of Chemistry : 2010). 4: 398-404. PMID 23264874 DOI: 10.1039/C2Sc20763J  0.626
2013 Wilson TD, Yu Y, Lu Y. Understanding copper-thiolate containing electron transfer centers by incorporation of unnatural amino acids and the Cu A center into the type 1 copper protein azurin Coordination Chemistry Reviews. 257: 260-276. DOI: 10.1016/J.Ccr.2012.06.015  0.608
2013 Wei H, House S, Wu J, Zhang J, Wang Z, He Y, Gao EJ, Gao Y, Robinson H, Li W, Zuo J, Robertson IM, Lu Y. Enhanced and tunable fluorescent quantum dots within a single crystal of protein Nano Research. 6: 627-634. DOI: 10.1007/S12274-013-0348-0  0.549
2013 Marshall NM, Miner KD, Wilson TD, Lu Y. Rational Design of Protein Cages for Alternative Enzymatic Functions Coordination Chemistry in Protein Cages: Principles, Design, and Applications. 111-147. DOI: 10.1002/9781118571811.ch5  0.772
2012 Shigeta K, He Y, Sutanto E, Kang S, Le AP, Nuzzo RG, Alleyne AG, Ferreira PM, Lu Y, Rogers JA. Functional protein microarrays by electrohydrodynamic jet printing. Analytical Chemistry. 84: 10012-8. PMID 23072614 DOI: 10.1021/Ac302463P  0.441
2012 Xiang Y, Lu Y. Expanding targets of DNAzyme-based sensors through deactivation and activation of DNAzymes by single uracil removal: sensitive fluorescent assay of uracil-DNA glycosylase. Analytical Chemistry. 84: 9981-7. PMID 23072386 DOI: 10.1021/Ac302424F  0.325
2012 Hadt RG, Sun N, Marshall NM, Hodgson KO, Hedman B, Lu Y, Solomon EI. Spectroscopic and DFT studies of second-sphere variants of the type 1 copper site in azurin: covalent and nonlocal electrostatic contributions to reduction potentials. Journal of the American Chemical Society. 134: 16701-16. PMID 22985400 DOI: 10.1021/Ja306438N  0.722
2012 Wang Z, Tang L, Tan LH, Li J, Lu Y. Discovery of the DNA "genetic code" for abiological gold nanoparticle morphologies. Angewandte Chemie (International Ed. in English). 51: 9078-82. PMID 22865657 DOI: 10.1002/Anie.201203716  0.463
2012 Xing H, Wong NY, Xiang Y, Lu Y. DNA aptamer functionalized nanomaterials for intracellular analysis, cancer cell imaging and drug delivery. Current Opinion in Chemical Biology. 16: 429-35. PMID 22541663 DOI: 10.1016/J.Cbpa.2012.03.016  0.625
2012 Miner KD, Mukherjee A, Gao YG, Null EL, Petrik ID, Zhao X, Yeung N, Robinson H, Lu Y. A designed functional metalloenzyme that reduces O2 to H2O with over one thousand turnovers. Angewandte Chemie (International Ed. in English). 51: 5589-92. PMID 22539151 DOI: 10.1002/Anie.201201981  0.775
2012 Zeng W, Barabanschikov A, Wang N, Lu Y, Zhao J, Sturhahn W, Alp EE, Sage JT. Vibrational dynamics of oxygenated heme proteins. Chemical Communications (Cambridge, England). PMID 22498848 DOI: 10.1039/C2Cc31239E  0.465
2012 New SY, Marshall NM, Hor TS, Xue F, Lu Y. Redox tuning of two biological copper centers through non-covalent interactions: same trend but different magnitude. Chemical Communications (Cambridge, England). 48: 4217-9. PMID 22441412 DOI: 10.1039/C2Cc30901G  0.665
2012 Liu X, Yu Y, Hu C, Zhang W, Lu Y, Wang J. Significant increase of oxidase activity through the genetic incorporation of a tyrosine-histidine cross-link in a myoglobin model of heme-copper oxidase. Angewandte Chemie (International Ed. in English). 51: 4312-6. PMID 22411709 DOI: 10.1002/Anie.201108756  0.354
2012 Song P, Xiang Y, Xing H, Zhou Z, Tong A, Lu Y. Label-free catalytic and molecular beacon containing an abasic site for sensitive fluorescent detection of small inorganic and organic molecules. Analytical Chemistry. 84: 2916-22. PMID 22400799 DOI: 10.1021/Ac203488P  0.625
2012 Ihms HE, Lu Y. In vitro selection of metal ion-selective DNAzymes. Methods in Molecular Biology (Clifton, N.J.). 848: 297-316. PMID 22315076 DOI: 10.1007/978-1-61779-545-9_18  0.363
2012 Wei H, Lu Y. Catalysis of gold nanoparticles within lysozyme single crystals. Chemistry, An Asian Journal. 7: 680-3. PMID 22290848 DOI: 10.1002/Asia.201100942  0.493
2012 Nelson KE, Ihms HE, Mazumdar D, Bruesehoff PJ, Lu Y. The importance of peripheral sequences in determining the metal selectivity of an in vitro-selected Co(2+) -dependent DNAzyme. Chembiochem : a European Journal of Chemical Biology. 13: 381-91. PMID 22250000 DOI: 10.1002/Cbic.201100724  0.795
2012 Lan T, Lu Y. Metal ion-dependent DNAzymes and their applications as biosensors. Metal Ions in Life Sciences. 10: 217-48. PMID 22210341 DOI: 10.1007/978-94-007-2172-2_8  0.388
2012 Xing H, Wang Z, Xu Z, Wong NY, Xiang Y, Liu GL, Lu Y. DNA-directed assembly of asymmetric nanoclusters using Janus nanoparticles. Acs Nano. 6: 802-9. PMID 22148462 DOI: 10.1021/Nn2042797  0.618
2012 Wei H, Lu Y. Cover Picture: Catalysis of Gold Nanoparticles within Lysozyme Single Crystals (Chem. Asian J. 4/2012) Chemistry - An Asian Journal. 7: 625-625. DOI: 10.1002/Asia.201290010  0.442
2011 He Y, Lu Y. Metal-ion-dependent folding of a uranyl-specific DNAzyme: insight into function from fluorescence resonance energy transfer studies. Chemistry (Weinheim An Der Bergstrasse, Germany). 17: 13732-42. PMID 22052817 DOI: 10.1002/Chem.201100352  0.479
2011 Garner DK, Liang L, Barrios DA, Zhang JL, Lu Y. Covalent Anchor Positions Play an Important Role in Tuning Catalytic Properties of a Rationally Designed MnSalen-containing Metalloenzyme. Acs Catalysis. 1: 1083-1089. PMID 22013554 DOI: 10.1021/Cs200258E  0.794
2011 Wilson TD, Savelieff MG, Nilges MJ, Marshall NM, Lu Y. Kinetics of copper incorporation into a biosynthetic purple Cu(A) azurin: characterization of red, blue, and a new intermediate species. Journal of the American Chemical Society. 133: 20778-92. PMID 21985501 DOI: 10.1021/Ja205281T  0.798
2011 Hayashi T, Miner KD, Yeung N, Lin YW, Lu Y, Moënne-Loccoz P. Spectroscopic characterization of mononitrosyl complexes in heme--nonheme diiron centers within the myoglobin scaffold (Fe(B)Mbs): relevance to denitrifying NO reductase. Biochemistry. 50: 5939-47. PMID 21634416 DOI: 10.1021/Bi200409A  0.81
2011 Xu W, Lu Y. A smart magnetic resonance imaging contrast agent responsive to adenosine based on a DNA aptamer-conjugated gadolinium complex. Chemical Communications (Cambridge, England). 47: 4998-5000. PMID 21424019 DOI: 10.1039/C1Cc10161G  0.723
2011 Torabi SF, Lu Y. Small-molecule diagnostics based on functional DNA nanotechnology: a dipstick test for mercury. Faraday Discussions. 149: 125-35; discussion 1. PMID 21413179 DOI: 10.1039/C005404F  0.608
2011 Zhang XB, Kong RM, Lu Y. Metal ion sensors based on DNAzymes and related DNA molecules. Annual Review of Analytical Chemistry (Palo Alto, Calif.). 4: 105-28. PMID 21370984 DOI: 10.1146/Annurev.Anchem.111808.073617  0.339
2011 Wei H, Wang Z, Zhang J, House S, Gao YG, Yang L, Robinson H, Tan LH, Xing H, Hou C, Robertson IM, Zuo JM, Lu Y. Time-dependent, protein-directed growth of gold nanoparticles within a single crystal of lysozyme. Nature Nanotechnology. 6: 93-7. PMID 21278750 DOI: 10.1038/Nnano.2010.280  0.675
2011 Yang Z, Yan C, Chen Y, Zhu C, Zhang C, Dong X, Yang W, Guo Z, Lu Y, He W. A novel terpyridine/benzofurazan hybrid fluorophore: metal sensing behavior and application Dalton Transactions. 40: 2173-2176. PMID 21088789 DOI: 10.1039/C0Dt01053G  0.313
2010 Thorum MS, Anderson CA, Hatch JJ, Campbell AS, Marshall NM, Zimmerman SC, Lu Y, Gewirth AA. Direct, Electrocatalytic Oxygen Reduction by Laccase on Anthracene-2-methanethiol Modified Gold. The Journal of Physical Chemistry Letters. 1: 2251-2254. PMID 20847902 DOI: 10.1021/Jz100745S  0.645
2010 Clark KM, Yu Y, Marshall NM, Sieracki NA, Nilges MJ, Blackburn NJ, van der Donk WA, Lu Y. Transforming a blue copper into a red copper protein: engineering cysteine and homocysteine into the axial position of azurin using site-directed mutagenesis and expressed protein ligation. Journal of the American Chemical Society. 132: 10093-101. PMID 20608676 DOI: 10.1021/Ja102632P  0.809
2010 Lin YW, Yeung N, Gao YG, Miner KD, Lei L, Robinson H, Lu Y. Introducing a 2-His-1-Glu nonheme iron center into myoglobin confers nitric oxide reductase activity. Journal of the American Chemical Society. 132: 9970-2. PMID 20586490 DOI: 10.1021/Ja103516N  0.806
2010 Lee JH, Wong NY, Tan LH, Wang Z, Lu Y. Controlled alignment of multiple proteins and nanoparticles with nanometer resolution via backbone-modified phosphorothioate DNA and bifunctional linkers. Journal of the American Chemical Society. 132: 8906-8. PMID 20536179 DOI: 10.1021/Ja103739F  0.439
2010 Zhang XB, Wang Z, Xing H, Xiang Y, Lu Y. Catalytic and molecular beacons for amplified detection of metal ions and organic molecules with high sensitivity. Analytical Chemistry. 82: 5005-11. PMID 20481627 DOI: 10.1021/Ac1009047  0.65
2010 Xiang Y, Wang Z, Xing H, Wong NY, Lu Y. Label-free fluorescent functional DNA sensors using unmodified DNA: a vacant site approach. Analytical Chemistry. 82: 4122-9. PMID 20465295 DOI: 10.1021/Ac100244H  0.641
2010 Lin YW, Yeung N, Gao YG, Miner KD, Tian S, Robinson H, Lu Y. Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin. Proceedings of the National Academy of Sciences of the United States of America. 107: 8581-6. PMID 20421510 DOI: 10.1073/Pnas.1000526107  0.812
2010 Wei H, Wang Z, Yang L, Tian S, Hou C, Lu Y. Lysozyme-stabilized gold fluorescent cluster: Synthesis and application as Hg(2+) sensor. The Analyst. 135: 1406-10. PMID 20411205 DOI: 10.1039/C0An00046A  0.764
2010 Wang Z, Zhang J, Ekman JM, Kenis PJ, Lu Y. DNA-mediated control of metal nanoparticle shape: one-pot synthesis and cellular uptake of highly stable and functional gold nanoflowers. Nano Letters. 10: 1886-91. PMID 20405820 DOI: 10.1021/Nl100675P  0.307
2010 Lee JH, Yigit MV, Mazumdar D, Lu Y. Molecular diagnostic and drug delivery agents based on aptamer-nanomaterial conjugates. Advanced Drug Delivery Reviews. 62: 592-605. PMID 20338204 DOI: 10.1016/J.Addr.2010.03.003  0.723
2010 Savelieff MG, Lu Y. Cu(A) centers and their biosynthetic models in azurin. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 15: 461-83. PMID 20169379 DOI: 10.1007/S00775-010-0625-2  0.704
2010 Mazumdar D, Liu J, Lu G, Zhou J, Lu Y. Easy-to-use dipstick tests for detection of lead in paints using non-cross-linked gold nanoparticle-DNAzyme conjugates. Chemical Communications (Cambridge, England). 46: 1416-8. PMID 20162133 DOI: 10.1039/B917772H  0.629
2010 Lu Y. Metal ions as matchmakers for proteins Proceedings of the National Academy of Sciences of the United States of America. 107: 1811-1812. PMID 20133828 DOI: 10.1073/Pnas.0914008107  0.305
2010 Null EL, Lu Y. Rapid determination of enantiomeric ratio using fluorescent DNA or RNA aptamers. The Analyst. 135: 419-22. PMID 20098779 DOI: 10.1039/B921267A  0.762
2010 Lu C, Zhao X, Lu Y, Rousseau DL, Yeh SR. Role of copper ion in regulating ligand binding in a myoglobin-based cytochrome C oxidase model. Journal of the American Chemical Society. 132: 1598-605. PMID 20070118 DOI: 10.1021/Ja907777F  0.362
2010 Xu W, Lu Y. Label-free fluorescent aptamer sensor based on regulation of malachite green fluorescence. Analytical Chemistry. 82: 574-8. PMID 20017558 DOI: 10.1021/Ac9018473  0.722
2009 Lu Y, Liu J. Catalyst-functionalized nanomaterials. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. 1: 35-46. PMID 20049777 DOI: 10.1002/Wnan.21  0.521
2009 Yeung N, Lin YW, Gao YG, Zhao X, Russell BS, Lei L, Miner KD, Robinson H, Lu Y. Rational design of a structural and functional nitric oxide reductase. Nature. 462: 1079-82. PMID 19940850 DOI: 10.1038/Nature08620  0.815
2009 Marshall NM, Garner DK, Wilson TD, Gao YG, Robinson H, Nilges MJ, Lu Y. Rationally tuning the reduction potential of a single cupredoxin beyond the natural range. Nature. 462: 113-6. PMID 19890331 DOI: 10.1038/Nature08551  0.801
2009 Yigit MV, Mishra A, Tong R, Cheng J, Wong GC, Lu Y. Inorganic mercury detection and controlled release of chelating agents from ion-responsive liposomes. Chemistry & Biology. 16: 937-42. PMID 19778721 DOI: 10.1016/J.Chembiol.2009.08.011  0.615
2009 Lu Y, Yeung N, Sieracki N, Marshall NM. Design of functional metalloproteins. Nature. 460: 855-62. PMID 19675646 DOI: 10.1038/Nature08304  0.773
2009 Wu Z, Liu Q, Liang X, Yang X, Wang N, Wang X, Sun H, Lu Y, Guo Z. Reactivity of platinum-based antitumor drugs towards a Met- and His-rich 20mer peptide corresponding to the N-terminal domain of human copper transporter 1. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 14: 1313-23. PMID 19669174 DOI: 10.1007/S00775-009-0576-7  0.437
2009 Clark KM, van der Donk WA, Lu Y. Chapter 5 Expressed Protein Ligation for Metalloprotein Design and Engineering Methods in Enzymology. 462: 97-115. PMID 19632471 DOI: 10.1016/S0076-6879(09)62005-X  0.386
2009 Cao Z, Tong R, Mishra A, Xu W, Wong GC, Cheng J, Lu Y. Reversible cell-specific drug delivery with aptamer-functionalized liposomes. Angewandte Chemie (International Ed. in English). 48: 6494-8. PMID 19623590 DOI: 10.1002/Anie.200901452  0.696
2009 Nagraj N, Liu J, Sterling S, Wu J, Lu Y. DNAzyme catalytic beacon sensors that resist temperature-dependent variations. Chemical Communications (Cambridge, England). 4103-5. PMID 19568647 DOI: 10.1039/B903059J  0.763
2009 Zhang JL, Garner DK, Liang L, Barrios DA, Lu Y. Noncovalent modulation of pH-dependent reactivity of a Mn-salen cofactor in myoglobin with hydrogen peroxide. Chemistry (Weinheim An Der Bergstrasse, Germany). 15: 7481-9. PMID 19557774 DOI: 10.1002/Chem.200802449  0.799
2009 Lu Y, Liu J, Mazumdar D. Nanoparticles/Dip stick. Methods in Molecular Biology (Clifton, N.J.). 535: 223-39. PMID 19377992 DOI: 10.1007/978-1-59745-557-2_14  0.652
2009 Mazumdar D, Nagraj N, Kim HK, Meng X, Brown AK, Sun Q, Li W, Lu Y. Activity, folding and Z-DNA formation of the 8-17 DNAzyme in the presence of monovalent ions. Journal of the American Chemical Society. 131: 5506-15. PMID 19326878 DOI: 10.1021/Ja8082939  0.804
2009 Liu J, Cao Z, Lu Y. Functional nucleic acid sensors. Chemical Reviews. 109: 1948-98. PMID 19301873 DOI: 10.1021/Cr030183I  0.457
2009 Brown AK, Liu J, He Y, Lu Y. Biochemical characterization of a uranyl ion-specific DNAzyme. Chembiochem : a European Journal of Chemical Biology. 10: 486-92. PMID 19142882 DOI: 10.1002/Cbic.200800632  0.632
2009 Ravel B, Slimmer SC, Meng X, Wong GCL, Lu Y. EXAFS studies of catalytic DNA sensors for mercury contamination of water Radiation Physics and Chemistry. 78. DOI: 10.1016/J.Radphyschem.2009.05.024  0.302
2008 Park JU, Lee JH, Paik U, Lu Y, Rogers JA. Nanoscale patterns of oligonucleotides formed by electrohydrodynamic jet printing with applications in biosensing and nanomaterials assembly. Nano Letters. 8: 4210-6. PMID 19367962 DOI: 10.1021/Nl801832V  0.397
2008 Wang Z, Lee JH, Lu Y. Highly sensitive "turn-on" fluorescent sensor for Hg2+ in aqueous solution based on structure-switching DNA. Chemical Communications. 6005-6007. PMID 19030567 DOI: 10.1039/B812755G  0.418
2008 Lee JH, Wang Z, Liu J, Lu Y. Highly sensitive and selective colorimetric sensors for uranyl (UO2(2+)): development and comparison of labeled and label-free DNAzyme-gold nanoparticle systems. Journal of the American Chemical Society. 130: 14217-26. PMID 18837498 DOI: 10.1021/Ja803607Z  0.582
2008 Yeung N, Lu Y. One heme, diverse functions: using biosynthetic myoglobin models to gain insights into heme-copper oxidases and nitric oxide reductases. Chemistry & Biodiversity. 5: 1437-48. PMID 18729107 DOI: 10.1002/Cbdv.200890134  0.78
2008 Kim HK, Li J, Nagraj N, Lu Y. Probing metal binding in the 8-17 DNAzyme by TbIII luminescence spectroscopy. Chemistry (Weinheim An Der Bergstrasse, Germany). 14: 8696-703. PMID 18688837 DOI: 10.1002/Chem.200701789  0.801
2008 Shyr MH, Wernette DP, Wiltzius P, Lu Y, Braun PV. DNA and DNAzyme-mediated 2D colloidal assembly. Journal of the American Chemical Society. 130: 8234-40. PMID 18540602 DOI: 10.1021/Ja711026R  0.77
2008 Savelieff MG, Wilson TD, Elias Y, Nilges MJ, Garner DK, Lu Y. Experimental evidence for a link among cupredoxins: red, blue, and purple copper transformations in nitrous oxide reductase. Proceedings of the National Academy of Sciences of the United States of America. 105: 7919-24. PMID 18535143 DOI: 10.1073/Pnas.0711316105  0.799
2008 Dalavoy TS, Wernette DP, Gong M, Sweedler JV, Lu Y, Flachsbart BR, Shannon MA, Bohn PW, Cropek DM. Immobilization of DNAzyme catalytic beacons on PMMA for Pb2+ detection. Lab On a Chip. 8: 786-93. PMID 18432350 DOI: 10.1039/B718624J  0.793
2008 Zhang JL, Garner DK, Liang L, Chen Q, Lu Y. Protein scaffold of a designed metalloenzyme enhances the chemoselectivity in sulfoxidation of thioanisole. Chemical Communications (Cambridge, England). 1665-7. PMID 18368158 DOI: 10.1039/B718915J  0.778
2008 Xie X, Gorelsky SI, Sarangi R, Garner DK, Hwang HJ, Hodgson KO, Hedman B, Lu Y, Solomon EI. Perturbations to the geometric and electronic structure of the CuA site: factors that influence delocalization and their contributions to electron transfer. Journal of the American Chemical Society. 130: 5194-205. PMID 18348522 DOI: 10.1021/Ja7102668  0.792
2008 Sarangi R, Gorelsky SI, Basumallick L, Hwang HJ, Pratt RC, Stack TD, Lu Y, Hodgson KO, Hedman B, Solomon EI. Spectroscopic and density functional theory studies of the blue-copper site in M121SeM and C112SeC azurin: Cu-Se versus Cu-S bonding. Journal of the American Chemical Society. 130: 3866-77. PMID 18314977 DOI: 10.1021/Ja076495A  0.632
2008 Sieracki NA, Hwang HJ, Lee MK, Garner DK, Lu Y. A temperature independent pH (TIP) buffer for biomedical biophysical applications at low temperatures. Chemical Communications (Cambridge, England). 823-5. PMID 18253516 DOI: 10.1039/B714446F  0.75
2008 Yigit MV, Mazumdar D, Lu Y. MRI detection of thrombin with aptamer functionalized superparamagnetic iron oxide nanoparticles. Bioconjugate Chemistry. 19: 412-7. PMID 18173225 DOI: 10.1021/Bc7003928  0.716
2008 Wernette DP, Liu J, Bohn PW, Lu Y. Functional-DNA-based nanoscale materials and devices for sensing trace contaminants in water Mrs Bulletin. 33: 34-41. DOI: 10.1557/Mrs2008.12  0.772
2008 Savelieff MG, Lu Y. pH dependent copper binding properties of a CuA azurin variant with both bridging cysteines replaced with serines Inorganica Chimica Acta. 361: 1087-1094. DOI: 10.1016/J.Ica.2007.08.007  0.71
2008 Wang Z, Lee JH, Lu Y. Label-free colorimetric detection of lead ions with a nanomolar detection limit and tunable dynamic range by using gold nanoparticles and DNAzyme Advanced Materials. 20: 3263-3267. DOI: 10.1002/Adma.200703181  0.453
2007 Liu J, Lu Y. Colorimetric Cu2+ detection with a ligation DNAzyme and nanoparticles. Chemical Communications (Cambridge, England). 4872-4. PMID 18361353 DOI: 10.1039/B712421J  0.532
2007 Denofrio LA, Russell B, Lopatto D, Lu Y. Mentoring: Linking student interests to science curricula Science. 318: 1872-1873. PMID 18096791 DOI: 10.1126/Science.1150788  0.616
2007 Kim HK, Rasnik I, Liu J, Ha T, Lu Y. Dissecting metal ion-dependent folding and catalysis of a single DNAzyme. Nature Chemical Biology. 3: 763-8. PMID 17965708 DOI: 10.1038/Nchembio.2007.45  0.63
2007 Lee JH, Wernette DP, Yigit MV, Liu J, Wang Z, Lu Y. Site-specific control of distances between gold nanoparticles using phosphorothioate anchors on DNA and a short bifunctional molecular fastener. Angewandte Chemie (International Ed. in English). 46: 9006-10. PMID 17960545 DOI: 10.1002/Anie.200702569  0.763
2007 Liu J, Lu Y. Rational design of "turn-on" allosteric DNAzyme catalytic beacons for aqueous mercury ions with ultrahigh sensitivity and selectivity. Angewandte Chemie (International Ed. in English). 46: 7587-90. PMID 17722216 DOI: 10.1002/Anie.200702006  0.506
2007 Yigit MV, Mazumdar D, Kim HK, Lee JH, Odintsov B, Lu Y. Smart "turn-on" magnetic resonance contrast agents based on aptamer-functionalized superparamagnetic iron oxide nanoparticles. Chembiochem : a European Journal of Chemical Biology. 8: 1675-8. PMID 17696177 DOI: 10.1002/Cbic.200700323  0.753
2007 Wernette DP, Mead C, Bohn PW, Lu Y. Surface immobilization of catalytic beacons based on ratiometric fluorescent DNAzyme sensors: a systematic study. Langmuir : the Acs Journal of Surfaces and Colloids. 23: 9513-21. PMID 17676880 DOI: 10.1021/La701303K  0.792
2007 Liu J, Lu Y. A DNAzyme catalytic beacon sensor for paramagnetic Cu2+ ions in aqueous solution with high sensitivity and selectivity. Journal of the American Chemical Society. 129: 9838-9. PMID 17645334 DOI: 10.1021/Ja0717358  0.563
2007 Liu J, Lu Y. Non-base pairing DNA provides a new dimension for controlling aptamer-linked nanoparticles and sensors. Journal of the American Chemical Society. 129: 8634-43. PMID 17567134 DOI: 10.1021/Ja072075+  0.506
2007 Kim HK, Liu J, Li J, Nagraj N, Li M, Pavot CM, Lu Y. Metal-dependent global folding and activity of the 8-17 DNAzyme studied by fluorescence resonance energy transfer. Journal of the American Chemical Society. 129: 6896-902. PMID 17488081 DOI: 10.1021/Ja0712625  0.811
2007 Liu J, Lee JH, Lu Y. Quantum dot encoding of aptamer-linked nanostructures for one-pot simultaneous detection of multiple analytes. Analytical Chemistry. 79: 4120-5. PMID 17477504 DOI: 10.1021/Ac070055K  0.53
2007 Lu Y, Liu J. Smart nanomaterials inspired by biology: dynamic assembly of error-free nanomaterials in response to multiple chemical and biological stimuli. Accounts of Chemical Research. 40: 315-23. PMID 17474707 DOI: 10.1021/Ar600053G  0.463
2007 Liu J, Brown AK, Meng X, Cropek DM, Istok JD, Watson DB, Lu Y. A catalytic beacon sensor for uranium with parts-per-trillion sensitivity and millionfold selectivity. Proceedings of the National Academy of Sciences of the United States of America. 104: 2056-61. PMID 17284609 DOI: 10.1073/Pnas.0607875104  0.522
2007 Farver O, Hwang HJ, Lu Y, Pecht I. Reorganization energy of the CuA center in purple azurin: impact of the mixed valence-to-trapped valence state transition. The Journal of Physical Chemistry. B. 111: 6690-4. PMID 17274649 DOI: 10.1021/Jp0672555  0.487
2007 Pfister TD, Mirarefi AY, Gengenbach AJ, Zhao X, Danstrom C, Conatser N, Gao YG, Robinson H, Zukoski CF, Wang AH, Lu Y. Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 12: 126-37. PMID 17021923 DOI: 10.1007/S00775-006-0171-0  0.814
2007 Lu Y, Pfister TD. Beyond Heme‐Thiolate Interactions: Roles of the Secondary Coordination Sphere in Cytochrome P450 Systems Metal Ions in Life Sciences. 3: 267-284. DOI: 10.1002/9780470028155.Ch9  0.625
2006 Liu J, Lu Y. Preparation of aptamer-linked gold nanoparticle purple aggregates for colorimetric sensing of analytes. Nature Protocols. 1: 246-52. PMID 17406240 DOI: 10.1038/Nprot.2006.38  0.511
2006 Garner DK, Vaughan MD, Hwang HJ, Savelieff MG, Berry SM, Honek JF, Lu Y. Reduction potential tuning of the blue copper center in Pseudomonas aeruginosa azurin by the axial methionine as probed by unnatural amino acids. Journal of the American Chemical Society. 128: 15608-17. PMID 17147368 DOI: 10.1021/Ja062732I  0.789
2006 Lu Y. Metalloprotein and metallo-DNA/RNAzyme design: Current approaches, success measures, and future challenges Inorganic Chemistry. 45: 9930-9940. PMID 17140190 DOI: 10.1021/Ic052007T  0.366
2006 Liu J, Mazumdar D, Lu Y. A simple and sensitive "dipstick" test in serum based on lateral flow separation of aptamer-linked nanostructures. Angewandte Chemie (International Ed. in English). 45: 7955-9. PMID 17094149 DOI: 10.1002/Anie.200603106  0.629
2006 Lu Y, Liu J. Functional DNA nanotechnology: emerging applications of DNAzymes and aptamers. Current Opinion in Biotechnology. 17: 580-8. PMID 17056247 DOI: 10.1016/J.Copbio.2006.10.004  0.495
2006 Liu J, Lu Y. Design of asymmetric DNAzymes for dynamic control of nanoparticle aggregation states in response to chemical stimuli. Organic & Biomolecular Chemistry. 4: 3435-41. PMID 17036137 DOI: 10.1039/B605799C  0.516
2006 Lu Y. Biosynthetic inorganic chemistry Angewandte Chemie - International Edition. 45: 5588-5601. PMID 16900547 DOI: 10.1002/Anie.200600168  0.307
2006 Liu J, Lu Y. Fluorescent DNAzyme biosensors for metal ions based on catalytic molecular beacons. Methods in Molecular Biology (Clifton, N.J.). 335: 275-88. PMID 16785634 DOI: 10.1385/1-59745-069-3:275  0.542
2006 Liu J, Lu Y. Multi-fluorophore fluorescence resonance energy transfer for probing nucleic acids structure and folding. Methods in Molecular Biology (Clifton, N.J.). 335: 257-71. PMID 16785633 DOI: 10.1385/1-59745-069-3:257  0.493
2006 Zhao X, Yeung N, Russell BS, Garner DK, Lu Y. Catalytic reduction of NO to N2O by a designed heme copper center in myoglobin: implications for the role of metal ions. Journal of the American Chemical Society. 128: 6766-7. PMID 16719438 DOI: 10.1021/Ja058822P  0.823
2006 Hwang HJ, Nagraj N, Lu Y. Spectroscopic characterizations of bridging cysteine ligand variants of an engineered Cu2(Scys)2 CuA azurin. Inorganic Chemistry. 45: 102-7. PMID 16390045 DOI: 10.1021/Ic051375U  0.813
2006 Wernette DP, Swearingen CB, Cropek DM, Lu Y, Sweedler JV, Bohn PW. Incorporation of a DNAzyme into Au-coated nanocapillary array membranes with an internal standard for Pb(ii) sensing. The Analyst. 131: 41-7. PMID 16365661 DOI: 10.1039/B510071B  0.783
2006 Liu J, Lu Y. Smart Nanomaterials Responsive to Multiple Chemical Stimuli with Controllable Cooperativity Advanced Materials. 18: 1667-1671. DOI: 10.1002/Adma.200600525  0.439
2005 Wang N, Zhao X, Lu Y. Role of heme types in heme-copper oxidases: effects of replacing a heme b with a heme o mimic in an engineered heme-copper center in myoglobin. Journal of the American Chemical Society. 127: 16541-7. PMID 16305243 DOI: 10.1021/Ja052659G  0.493
2005 Liu J, Lu Y. Fast colorimetric sensing of adenosine and cocaine based on a general sensor design involving aptamers and nanoparticles. Angewandte Chemie (International Ed. in English). 45: 90-4. PMID 16292781 DOI: 10.1002/Anie.200502589  0.537
2005 Hwang HJ, Carey JR, Brower ET, Gengenbach AJ, Abramite JA, Lu Y. Blue ferrocenium azurin: an organometalloprotein with tunable redox properties. Journal of the American Chemical Society. 127: 15356-7. PMID 16262384 DOI: 10.1021/Ja054983H  0.796
2005 Liu J, Wernette DP, Lu Y. Proofreading and error removal in a nanomaterial assembly. Angewandte Chemie (International Ed. in English). 44: 7290-3. PMID 16229045 DOI: 10.1002/Anie.200501815  0.749
2005 Liu J, Lu Y. Stimuli-responsive disassembly of nanoparticle aggregates for light-up colorimetric sensing. Journal of the American Chemical Society. 127: 12677-83. PMID 16144417 DOI: 10.1021/Ja053567U  0.494
2005 Yim TJ, Liu J, Lu Y, Kane RS, Dordick JS. Highly active and stable DNAzyme-carbon nanotube hybrids. Journal of the American Chemical Society. 127: 12200-1. PMID 16131179 DOI: 10.1021/Ja0541581  0.487
2005 Nelson KE, Bruesehoff PJ, Lu Y. In vitro selection of high temperature Zn(2+)-dependent DNAzymes. Journal of Molecular Evolution. 61: 216-25. PMID 16096680 DOI: 10.1007/S00239-004-0374-3  0.8
2005 Shaikh KA, Ryu KS, Goluch ED, Nam JM, Liu J, Thaxton CS, Chiesl TN, Barron AE, Lu Y, Mirkin CA, Liu C. A modular microfluidic architecture for integrated biochemical analysis. Proceedings of the National Academy of Sciences of the United States of America. 102: 9745-50. PMID 15985549 DOI: 10.1073/Pnas.0504082102  0.576
2005 Chang IH, Tulock JJ, Liu J, Kim WS, Cannon DM, Lu Y, Bohn PW, Sweedler JV, Cropek DM. Miniaturized lead sensor based on lead-specific DNAzyme in a nanocapillary interconnected microfluidic device. Environmental Science & Technology. 39: 3756-61. PMID 15952382 DOI: 10.1021/Es040505F  0.496
2005 Hwang HJ, Berry SM, Nilges MJ, Lu Y. Axial methionine has much less influence on reduction potentials in a CuA center than in a blue copper center. Journal of the American Chemical Society. 127: 7274-5. PMID 15898751 DOI: 10.1021/Ja0501114  0.811
2005 Chen J, Wang X, Zhu Y, Lin J, Yang X, Li Y, Lu Y, Guo Z. An asymmetric dizinc phosphodiesterase model with phenolate and carboxylate bridges. Inorganic Chemistry. 44: 3422-30. PMID 15877422 DOI: 10.1021/Ic048654M  0.317
2005 Zhao X, Nilges MJ, Lu Y. Redox-dependent structural changes in an engineered heme-copper center in myoglobin: Insights into chloride binding to CUB in heme copper oxidases Biochemistry. 44: 6559-6564. PMID 15850389 DOI: 10.1021/Bi047465C  0.377
2005 Seifert JL, Pfister TD, Nocek JM, Lu Y, Hoffman BM. Hopping in the electron-transfer photocycle of the 1:1 complex of Zn-cytochrome c peroxidase with cytochrome c. Journal of the American Chemical Society. 127: 5750-1. PMID 15839648 DOI: 10.1021/Ja042459P  0.666
2005 Lu Y. Design and engineering of metalloproteins containing unnatural amino acids or non-native metal-containing cofactors. Current Opinion in Chemical Biology. 9: 118-26. PMID 15811795 DOI: 10.1016/J.Cbpa.2005.02.017  0.338
2005 Zhao X, Yeung N, Wang Z, Guo Z, Lu Y. Effects of metal ions in the CuB center on the redox properties of heme in heme-copper oxidases: spectroelectrochemical studies of an engineered heme-copper center in myoglobin. Biochemistry. 44: 1210-4. PMID 15667214 DOI: 10.1021/Bi0479151  0.775
2005 Pfister TD, Ohki T, Ueno T, Hara I, Adachi S, Makino Y, Ueyama N, Lu Y, Watanabe Y. Monooxygenation of an aromatic ring by F43W/H64D/V68I myoglobin mutant and hydrogen peroxide. Myoglobin mutants as a model for P450 hydroxylation chemistry. The Journal of Biological Chemistry. 280: 12858-66. PMID 15664991 DOI: 10.1074/Jbc.M410853200  0.673
2005 Swearingen CB, Wernette DP, Cropek DM, Lu Y, Sweedler JV, Bohn PW. Immobilization of a catalytic DNA molecular beacon on Au for Pb(II) detection. Analytical Chemistry. 77: 442-8. PMID 15649039 DOI: 10.1021/Ac0401016  0.791
2004 Liu J, Lu Y. Colorimetric biosensors based on DNAzyme-assembled gold nanoparticles. Journal of Fluorescence. 14: 343-54. PMID 15617377 DOI: 10.1023/B:Jofl.0000031816.06134.D3  0.51
2004 Liu J, Lu Y. Accelerated color change of gold nanoparticles assembled by DNAzymes for simple and fast colorimetric Pb2+ detection. Journal of the American Chemical Society. 126: 12298-305. PMID 15453763 DOI: 10.1021/Ja046628H  0.522
2004 Carey JR, Ma SK, Pfister TD, Garner DK, Kim HK, Abramite JA, Wang Z, Guo Z, Lu Y. A site-selective dual anchoring strategy for artificial metalloprotein design. Journal of the American Chemical Society. 126: 10812-3. PMID 15339144 DOI: 10.1021/Ja046908X  0.798
2004 Hwang HJ, Lu Y. pH-dependent transition between delocalized and trapped valence states of a CuA center and its possible role in proton-coupled electron transfer. Proceedings of the National Academy of Sciences of the United States of America. 101: 12842-7. PMID 15326290 DOI: 10.1073/Pnas.0403473101  0.543
2004 Ralle M, Berry SM, Nilges MJ, Gieselman MD, van der Donk WA, Lu Y, Blackburn NJ. The selenocysteine-substituted blue copper center: spectroscopic investigations of Cys112SeCys Pseudomonas aeruginosa azurin. Journal of the American Chemical Society. 126: 7244-56. PMID 15186162 DOI: 10.1021/Ja031821H  0.791
2004 Hwang HJ, Lu Y. Spectroscopic evidence for interactions between hexacyanoiron(II/III) and an engineered purple CuA azurin. Journal of Inorganic Biochemistry. 98: 797-802. PMID 15134925 DOI: 10.1016/J.Jinorgbio.2004.01.001  0.576
2004 Hwang HJ, Ang M, Lu Y. Determination of reduction potential of an engineered Cu(A) azurin by cyclic voltammetry and spectrochemical titrations. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 9: 489-94. PMID 15127249 DOI: 10.1007/S00775-004-0547-Y  0.502
2004 Liu J, Lu Y. Adenosine-dependent assembly of aptazyme-functionalized gold nanoparticles and its application as a colorimetric biosensor. Analytical Chemistry. 76: 1627-32. PMID 15018560 DOI: 10.1021/Ac0351769  0.511
2004 Liu J, Lu Y. Optimization of a Pb2+-Directed Gold Nanoparticle/DNAzyme Assembly and Its Application as a Colorimetric Biosensor for Pb2+ Chemistry of Materials. 16: 3231-3238. DOI: 10.1021/Cm049453J  0.502
2003 Liu J, Lu Y. Improving fluorescent DNAzyme biosensors by combining inter- and intramolecular quenchers. Analytical Chemistry. 75: 6666-72. PMID 14640743 DOI: 10.1021/Ac034924R  0.515
2003 Feng M, Tachikawa H, Wang X, Pfister TD, Gengenbach AJ, Lu Y. Resonance Raman spectroscopy of cytochrome c peroxidase variants that mimic manganese peroxidase. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 8: 699-706. PMID 14505074 DOI: 10.1007/S00775-003-0460-9  0.792
2003 Berry SM, Ralle M, Low DW, Blackburn NJ, Lu Y. Probing the role of axial methionine in the blue copper center of azurin with unnatural amino acids. Journal of the American Chemical Society. 125: 8760-8. PMID 12862470 DOI: 10.1021/Ja029699U  0.788
2003 Brown AK, Li J, Pavot CM-, Lu Y. A Lead-Dependent DNAzyme with a Two-Step Mechanism† Biochemistry. 42: 7152-7161. PMID 12795611 DOI: 10.1021/Bi027332W  0.307
2003 Liu J, Lu Y. A colorimetric lead biosensor using DNAzyme-directed assembly of gold nanoparticles. Journal of the American Chemical Society. 125: 6642-3. PMID 12769568 DOI: 10.1021/Ja034775U  0.497
2003 Lu Y, Liu J, Li J, Bruesehoff PJ, Pavot CM, Brown AK. New highly sensitive and selective catalytic DNA biosensors for metal ions. Biosensors & Bioelectronics. 18: 529-40. PMID 12706559 DOI: 10.1016/S0956-5663(03)00013-7  0.801
2003 Sigman JA, Kim HK, Zhao X, Carey JR, Lu Y. The role of copper and protons in heme-copper oxidases: kinetic study of an engineered heme-copper center in myoglobin. Proceedings of the National Academy of Sciences of the United States of America. 100: 3629-34. PMID 12655052 DOI: 10.1073/pnas.0737308100  0.808
2003 Perera R, Sono M, Sigman JA, Pfister TD, Lu Y, Dawson JH. Neutral thiol as a proximal ligand to ferrous heme iron: implications for heme proteins that lose cysteine thiolate ligation on reduction. Proceedings of the National Academy of Sciences of the United States of America. 100: 3641-6. PMID 12655049 DOI: 10.1073/Pnas.0737142100  0.802
2003 Liu J, Lu Y. FRET study of a trifluorophore-labeled DNAzyme. Journal of the American Chemical Society. 124: 15208-16. PMID 12487596 DOI: 10.1021/Ja027647Z  0.524
2003 Lu Y, Sigman JA, Kim HK, Zhao X, Carey JR. The role of copper and protons in heme-copper oxidases: Kinetic study of an engineered heme-copper center in myoglobin Journal of Inorganic Biochemistry. 96: 183. DOI: 10.1016/S0162-0134(03)80696-7  0.782
2003 Lu Y, Brown AK, Liu J, Li J, Bruesehoff PJ. Biochemical and biophysical study of transition metal ion-dependent DNAzymes Journal of Inorganic Biochemistry. 96: 182. DOI: 10.1016/S0162-0134(03)80695-5  0.788
2003 Lu Y, Berry SM, Gieselman MD, Ralle M, Low DW, van der Donk WA, Blackburn NJ. Introducing unnatural amino acids into protein metal-binding sites and its role in metalloprotein design and engineering Journal of Inorganic Biochemistry. 96: 181. DOI: 10.1016/S0162-0134(03)80694-3  0.786
2003 Lu Y, Liu J, Bruesehoff PJ, Brown AK, Nelson KE, Kim H, Wernette DP. New fluorescent and colorimetric DNAzyme biosensors for metal ions Journal of Inorganic Biochemistry. 96: 30. DOI: 10.1016/S0162-0134(03)80452-X  0.781
2002 Holloway GA, Pavot C, Scaringe SA, Lu Y, Rauchfuss TB. An organometallic route to oligonucleotides containing phosphoroselenoate. Chembiochem : a European Journal of Chemical Biology. 3: 1061-5. PMID 12404630 DOI: 10.1002/1439-7633(20021104)3:11<1061::Aid-Cbic1061>3.0.Co;2-9  0.322
2002 Epel B, Slutter CS, Neese F, Kroneck PM, Zumft WG, Pecht I, Farver O, Lu Y, Goldfarb D. Electron-mediating Cu(A) centers in proteins: a comparative high field (1)H ENDOR study. Journal of the American Chemical Society. 124: 8152-62. PMID 12095361 DOI: 10.1021/Ja012514J  0.37
2002 Lu Y, Sousa A, Franco R, Mangravita A, Ferreira GC, Moura I, Shelnutt JA. Binding of protoporphyrin IX and metal derivatives to the active site of wild-type mouse ferrochelatase at low porphyrin-to-protein ratios. Biochemistry. 41: 8253-62. PMID 12081474 DOI: 10.1021/Bi025569M  0.307
2002 Bruesehoff PJ, Li J, Augustine AJ, Lu Y. Improving metal ion specificity during in vitro selection of catalytic DNA. Combinatorial Chemistry & High Throughput Screening. 5: 327-35. PMID 12052183 DOI: 10.2174/1386207023330264  0.8
2002 Lukoyanov D, Berry SM, Lu Y, Antholine WE, Scholes CP. Role of the coordinating histidine in altering the mixed valency of Cu(A): an electron nuclear double resonance-electron paramagnetic resonance investigation. Biophysical Journal. 82: 2758-66. PMID 11964261 DOI: 10.1016/S0006-3495(02)75616-6  0.786
2002 Berry SM, Gieselman MD, Nilges MJ, van Der Donk WA, Lu Y. An engineered azurin variant containing a selenocysteine copper ligand. Journal of the American Chemical Society. 124: 2084-5. PMID 11878940 DOI: 10.1021/Ja0169163  0.805
2001 Pfister TD, Gengenbach AJ, Syn S, Lu Y. The role of redox-active amino acids on compound I stability, substrate oxidation, and protein cross-linking in yeast cytochrome C peroxidase. Biochemistry. 40: 14942-51. PMID 11732914 DOI: 10.1021/Bi011400H  0.791
2001 Lu Y, Berry SM, Pfister TD. Engineering novel metalloproteins: design of metal-binding sites into native protein scaffolds. Chemical Reviews. 101: 3047-80. PMID 11710062 DOI: 10.1021/Cr0000574  0.802
2001 Sigman JA, Wang X, Lu Y. Coupled oxidation of heme by myoglobin is mediated by exogenous peroxide. Journal of the American Chemical Society. 123: 6945-6. PMID 11448209 DOI: 10.1021/Ja015776U  0.763
2001 DeBeer George S, Metz M, Szilagyi RK, Wang H, Cramer SP, Lu Y, Tolman WB, Hedman B, Hodgson KO, Solomon EI. A quantitative description of the ground-state wave function of Cu(A) by X-ray absorption spectroscopy: comparison to plastocyanin and relevance to electron transfer. Journal of the American Chemical Society. 123: 5757-67. PMID 11403610 DOI: 10.1021/Ja004109I  0.636
2001 Gengenbach A, Wang X, Lu Y. Designing a manganese peroxidase Acs Symposium Series. 785: 487-500.  0.804
2000 Hay MT, Lu Y. Metal-binding properties of an engineered purple CuA center in azurin. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 5: 699-712. PMID 11128997 DOI: 10.1007/S007750000158  0.737
2000 Berry SM, Wang X, Lu Y. Ligand replacement study at the His120 site of purple CuA azurin. Journal of Inorganic Biochemistry. 78: 89-95. PMID 10714710 DOI: 10.1016/S0162-0134(99)00214-7  0.783
2000 Franco R, Ma JG, Lu Y, Ferreira GC, Shelnutt JA. Porphyrin interactions with wild-type and mutant mouse ferrochelatase. Biochemistry. 39: 2517-29. PMID 10704201 DOI: 10.1021/Bi991346T  0.386
2000 Sigman JA, Kwok BC, Lu Y. From myoglobin to heme-copper oxidase: Design and engineering of a Cu(B) center into sperm whale myoglobin Journal of the American Chemical Society. 122: 8192-8196. DOI: 10.1021/Ja0015343  0.813
1999 Gengenbach A, Syn S, Wang X, Lu Y. Redesign of cytochrome c peroxidase into a manganese peroxidase: Role of tryptophans in peroxidase activity Biochemistry. 38: 11425-11432. PMID 10471293 DOI: 10.1021/Bi990666+  0.782
1999 Sigman JA, Pond AE, Dawson JH, Lu Y. Engineering cytochrome c peroxidase into cytochrome P450: a proximal effect on heme-thiolate ligation. Biochemistry. 38: 11122-9. PMID 10460168 DOI: 10.1021/Bi990815O  0.801
1999 Robinson H, Ang MC, Gao YG, Hay MT, Lu Y, Wang AH. Structural basis of electron transfer modulation in the purple CuA center. Biochemistry. 38: 5677-83. PMID 10231517 DOI: 10.1021/Bi9901634  0.806
1999 Nguyen TH, Cunningham LA, Hammond KM, Lu Y. High-resolution preparative-scale purification of RNA using the Prep Cell. Analytical Biochemistry. 269: 216-8. PMID 10094802 DOI: 10.1006/Abio.1999.4030  0.574
1999 Farver O, Lu Y, Ang MC, Pecht I. Enhanced rate of intramolecular electron transfer in an engineered purple CuA azurin. Proceedings of the National Academy of Sciences of the United States of America. 96: 899-902. PMID 9927665 DOI: 10.1073/Pnas.96.3.899  0.746
1999 Wang X, Berry SM, Xia Y, Lu Y. The role of histidine ligands in the structure of purple Cu(A) azurin [23] Journal of the American Chemical Society. 121: 7449-7450. DOI: 10.1021/Ja991304S  0.779
1999 Sigman JA, Kwok BC, Gengenbach A, Lu Y. Design and creation of a Cu(II)-binding site in cytochrome c peroxidase that mimics the Cu(B)-heme center in terminal oxidases [5] Journal of the American Chemical Society. 121: 8949-8950. DOI: 10.1021/Ja991195H  0.796
1999 Wang X, Ang MC, Lu Y. Kinetics of copper incorporation into an engineered purple azurin Journal of the American Chemical Society. 121: 2947-2948. DOI: 10.1021/Ja982636K  0.725
1998 Cunningham LA, Li J, Lu Y. Spectroscopic evidence for inner-sphere coordination of metal ions to the active site of a hammerhead ribozyme Journal of the American Chemical Society. 120: 4518-4519. DOI: 10.1021/Ja973251P  0.645
1998 Gamelin DR, Randall DW, Hay MT, Houser RP, Mulder TC, Canters GW, De Vries S, Tolman WB, Lu Y, Solomon EI. Spectroscopy of mixed-valence Cu(A)-type centers: Ligand-field control of ground-state properties related to electron transfer Journal of the American Chemical Society. 120: 5246-5263. DOI: 10.1021/Ja973161K  0.744
1998 Hay MT, Ang MC, Gamelin DR, Solomon EI, Antholine WE, Ralle M, Blackburn NJ, Massey PD, Wang X, Kwon AH, Lu Y. Spectroscopic Characterization of an Engineered Purple CuACenter in Azurin Inorganic Chemistry. 37: 191-198. DOI: 10.1021/Ic971232A  0.789
1998 Blackburn NJ, Ralle M, Sanders D, Fee JA, De Vries S, Houser RP, Tolman WB, Hay MT, Lu Y. XAS Studies on the CuA Centers of Heme-Copper Oxidases and Loop-Directed Mutants of Azurin: Implications for Redox Reactivity Acs Symposium Series. 692: 241-259.  0.686
1997 Lu Y, Valentine JS. Engineering metal-binding sites in proteins. Current Opinion in Structural Biology. 7: 495-500. PMID 9266170 DOI: 10.1016/S0959-440X(97)80112-1  0.561
1997 Yeung BK, Wang X, Sigman JA, Petillo PA, Lu Y. Construction and characterization of a manganese-binding site in cytochrome c peroxidase: towards a novel manganese peroxidase. Chemistry & Biology. 4: 215-21. PMID 9115415 DOI: 10.1016/S1074-5521(97)90291-X  0.801
1996 Lu Y, Roe JA, Bender CJ, Peisach J, Banci L, Bertini I, Gralla EB, Valentine JS. New Type 2 Copper-Cysteinate Proteins. Copper Site Histidine-to-Cysteine Mutants of Yeast Copper-Zinc Superoxide Dismutase. Inorganic Chemistry. 35: 1692-1700. PMID 11666393 DOI: 10.1021/Ic9513189  0.569
1996 Cunningham L, Kittikamron K, Lu Y. Preparative-Scale Purification of RNA Using an Efficient Method Which Combines Gel Electrophoresis and Column Chromatography Nucleic Acids Research. 24: 3647-3648. PMID 8836197 DOI: 10.1093/Nar/24.18.3647  0.585
1996 Hay M, Richards JH, Lu Y. Construction and characterization of an azurin analog for the purple copper site in cytochrome c oxidase Proceedings of the National Academy of Sciences of the United States of America. 93: 461-464. PMID 8552661 DOI: 10.1073/Pnas.93.1.461  0.725
1996 Hay MT, Milberg RM, Lu Y. Preparation and characterization of mercury and silver derivatives of an engineered purple copper center in azurin Journal of the American Chemical Society. 118: 11976-11977. DOI: 10.1021/Ja962280H  0.727
1995 Andrew CR, Lappalainen P, Saraste M, Hay MT, Lu Y, Dennison C, Canters GW, Fee JA, Slutter CE, Nakamura N, Sanders-Loehr J. Engineered cupredoxins and bacterial cytochrome c oxidases have similar CuA sites: Evidence from resonance Raman spectroscopy Journal of the American Chemical Society. 117: 10759-10760. DOI: 10.1021/Ja00148A025  0.68
1995 Lu Y, Hay MT, Richards JH. Turning a blue copper protein into a purple copper protein: Making protein analogs to the CuA site of cytochrome C oxidase and the copper center in nitrous oxide reductase Journal of Inorganic Biochemistry. 59: 702. DOI: 10.1016/0162-0134(95)97790-W  0.715
1993 Lu Y, Casimiro DR, Bren KL, Richards JH, Gray HB. Structurally engineered cytochromes with unusual ligand-binding properties: expression of Saccharomyces cerevisiae Met-80-->Ala iso-1-cytochrome c. Proceedings of the National Academy of Sciences of the United States of America. 90: 11456-9. PMID 8265573 DOI: 10.1073/Pnas.90.24.11456  0.683
1993 Lu Y, LaCroix LB, Lowery MD, Solomon EI, Bender CJ, Peisach J, Roe JA, Gralla EB, Valentine JS. Construction of a blue copper site at the native zinc site of yeast copper-zinc superoxide dismutase Journal of the American Chemical Society. 115: 5907-5918. DOI: 10.1021/Ja00067A003  0.638
1993 Han J, Loehr TM, Lu Y, Valentine JS, Averill BA, Sanders-Loehr J. Resonance raman excitation profiles indicate multiple cys → Cu charge transfer transitions in type 1 copper proteins Journal of the American Chemical Society. 115: 4256-4263. DOI: 10.1021/Ja00063A048  0.549
1993 Yeom H, Lu Y, Andrew C, Sanders-Loehr J, Gralla E, Valentine J. Probing the active site of yeast copper-zinc SOD with cysteine. Journal of Inorganic Biochemistry. 51: 135. DOI: 10.1016/0162-0134(93)85171-4  0.552
1993 Lu Y, Rennecker J, Di Bilio AJ, Chang I, Casimiro DR, Winkler JR, Valentine JS, Gray HB. Electron-transfer properties of ruthenated yeast Cu-Zn superoxide dismutase mutants. Journal of Inorganic Biochemistry. 51: 109. DOI: 10.1016/0162-0134(93)85145-X  0.684
1993 Lu Y, Casimiro DR, Winkler JR, Richards JH, Gray HB. Expression and purification of the nonfunctional Met80Ala mutant of yeast iso-1-cytochrome c. Journal of Inorganic Biochemistry. 51: 108. DOI: 10.1016/0162-0134(93)85144-W  0.543
1992 Lu Y, Gralla EB, Roe JA, Valentine JS. The redesign of a type 2 into a type 1 copper protein: construction and characterization of yeast copper, zinc superoxide dismutase mutants Journal of the American Chemical Society. 114: 3560-3562. DOI: 10.1021/Ja00035A064  0.475
1992 Valentine JS, Lu Y, Graden JA, Yeom H, Gralla EB. Copper protein ligand redesign: Characterizations of yeast Cu, Zn superoxide dismutase active site mutants Journal of Inorganic Biochemistry. 47: 34. DOI: 10.1016/0162-0134(92)84105-V  0.571
1991 Lu Y, Gralla E, Roe J, Valentine J. The redesign of a type II into a type I copper protein: Construction, expression, purification and spectroscopic characterization of yeast Cu,Zn superoxide dismutase mutants Journal of Inorganic Biochemistry. 43: 184. DOI: 10.1016/0162-0134(91)84176-A  0.546
Show low-probability matches.