Thomas C. Alber - Publications

Affiliations: 
Molecular and Cell Biology University of California, Berkeley, Berkeley, CA 
Area:
host-pathogen interactions, motions in proteins
Website:
http://mcb.berkeley.edu/index.php?option=com_mcbfaculty&name=albert

119 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Hu S, Offenbacher AR, Thompson EM, Gee CL, Wilcoxen J, Carr CAM, Prigozhin DM, Yang V, Alber T, Britt RD, Fraser JS, Klinman JP. Biophysical Characterization of a Disabled Double Mutant of Soybean Lipoxygenase: The "Undoing" of Precise Substrate Positioning Relative to Metal Cofactor and an Identified Dynamical Network. Journal of the American Chemical Society. PMID 30645119 DOI: 10.1021/Jacs.8B10992  0.58
2018 Heinkel F, Shen L, Richard-Greenblatt M, Okon M, Bui JM, Gee CL, Gay LM, Alber T, Av-Gay Y, Gsponer J, McIntosh LP. Biophysical Characterization of the Tandem FHA Domain Regulatory Module from the Mycobacteriumtuberculosis ABC Transporter Rv1747. Structure (London, England : 1993). PMID 29861345 DOI: 10.1016/J.Str.2018.04.018  0.398
2017 Buchko GW, Echols N, Flynn EM, Ng H, Stephenson S, Kim HB, Myler PJ, Terwilliger TC, Alber T, Kim CY. Structural and biophysical characterization of the Mycobacterium tuberculosis protein Rv0577, a protein associated with neutral red staining of virulent tuberculosis strains and homolog of the Streptomyces coelicolor protein KbpA. Biochemistry. PMID 28692281 DOI: 10.1021/Acs.Biochem.7B00511  0.648
2017 Offenbacher AR, Hu S, Poss EM, Carr CAM, Scouras AD, Prigozhin DM, Iavarone AT, Palla A, Alber T, Fraser JS, Klinman JP. Hydrogen-Deuterium Exchange of Lipoxygenase Uncovers a Relationship between Distal, Solvent Exposed Protein Motions and the Thermal Activation Barrier for Catalytic Proton-Coupled Electron Tunneling. Acs Central Science. 3: 570-579. PMID 28691068 DOI: 10.1021/Acscentsci.7B00142  0.567
2016 Prigozhin DM, Papavinasasundaram KG, Baer CE, Murphy KC, Moskaleva A, Chen TY, Alber T, Sassetti CM. Structural and genetic analyses of the Mycobacterium tuberculosis Protein Kinase B sensor domain identify a potential ligand binding site. The Journal of Biological Chemistry. PMID 27601474 DOI: 10.1074/Jbc.M116.731760  0.475
2015 Kerns SJ, Agafonov RV, Cho YJ, Pontiggia F, Otten R, Pachov DV, Kutter S, Phung LA, Murphy PN, Thai V, Alber T, Hagan MF, Kern D. The energy landscape of adenylate kinase during catalysis. Nature Structural & Molecular Biology. 22: 124-31. PMID 25580578 DOI: 10.1038/Nsmb.2941  0.323
2014 Prigozhin DM, Krieger IV, Huizar JP, Mavrici D, Waldo GS, Hung LW, Sacchettini JC, Terwilliger TC, Alber T. Subfamily-specific adaptations in the structures of two penicillin-binding proteins from Mycobacterium tuberculosis. Plos One. 9: e116249. PMID 25551456 DOI: 10.1371/Journal.Pone.0116249  0.449
2014 Baer CE, Iavarone AT, Alber T, Sassetti CM. Biochemical and spatial coincidence in the provisional Ser/Thr protein kinase interaction network of Mycobacterium tuberculosis. The Journal of Biological Chemistry. 289: 20422-33. PMID 24928517 DOI: 10.1074/Jbc.M114.559054  0.351
2014 Hu S, Sharma SC, Scouras AD, Soudackov AV, Carr CA, Hammes-Schiffer S, Alber T, Klinman JP. Extremely elevated room-temperature kinetic isotope effects quantify the critical role of barrier width in enzymatic C-H activation. Journal of the American Chemical Society. 136: 8157-60. PMID 24884374 DOI: 10.1021/Ja502726S  0.349
2014 Mavrici D, Marakalala MJ, Holton JM, Prigozhin DM, Gee CL, Zhang YJ, Rubin EJ, Alber T. Mycobacterium tuberculosis FtsX extracellular domain activates the peptidoglycan hydrolase, RipC. Proceedings of the National Academy of Sciences of the United States of America. 111: 8037-42. PMID 24843173 DOI: 10.1073/Pnas.1321812111  0.673
2014 Schulze-Gahmen U, Lu H, Zhou Q, Alber T. AFF4 binding to Tat-P-TEFb indirectly stimulates TAR recognition of super elongation complexes at the HIV promoter. Elife. 3: e02375. PMID 24843025 DOI: 10.7554/Elife.02375  0.376
2014 Layre E, Lee HJ, Young DC, Martinot AJ, Buter J, Minnaard AJ, Annand JW, Fortune SM, Snider BB, Matsunaga I, Rubin EJ, Alber T, Moody DB. Molecular profiling of Mycobacterium tuberculosis identifies tuberculosinyl nucleoside products of the virulence-associated enzyme Rv3378c. Proceedings of the National Academy of Sciences of the United States of America. 111: 2978-83. PMID 24516143 DOI: 10.1073/Pnas.1315883111  0.366
2014 Mavrici D, Prigozhin DM, Alber T. Mycobacterium tuberculosis RpfE crystal structure reveals a positively charged catalytic cleft. Protein Science : a Publication of the Protein Society. 23: 481-7. PMID 24452911 DOI: 10.1002/Pro.2431  0.432
2014 Lang PT, Holton JM, Fraser JS, Alber T. Protein structural ensembles are revealed by redefining X-ray electron density noise Proceedings of the National Academy of Sciences of the United States of America. 111: 237-242. PMID 24363322 DOI: 10.1073/Pnas.1302823110  0.714
2013 Hatzios SK, Baer CE, Rustad TR, Siegrist MS, Pang JM, Ortega C, Alber T, Grundner C, Sherman DR, Bertozzi CR. Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase. Proceedings of the National Academy of Sciences of the United States of America. 110: E5069-77. PMID 24309377 DOI: 10.1073/Pnas.1321205110  0.355
2013 Prigozhin DM, Mavrici D, Huizar JP, Vansell HJ, Alber T. Structural and biochemical analyses of Mycobacterium tuberculosis N-acetylmuramyl-L-alanine amidase Rv3717 point to a role in peptidoglycan fragment recycling. The Journal of Biological Chemistry. 288: 31549-55. PMID 24019530 DOI: 10.1074/Jbc.M113.510792  0.409
2013 Chao MC, Kieser KJ, Minami S, Mavrici D, Aldridge BB, Fortune SM, Alber T, Rubin EJ. Protein complexes and proteolytic activation of the cell wall hydrolase RipA regulate septal resolution in mycobacteria. Plos Pathogens. 9: e1003197. PMID 23468634 DOI: 10.1371/Journal.Ppat.1003197  0.354
2013 Katibah GE, Lee HJ, Huizar JP, Vogan JM, Alber T, Collins K. tRNA binding, structure, and localization of the human interferon-induced protein IFIT5. Molecular Cell. 49: 743-50. PMID 23317505 DOI: 10.1016/J.Molcel.2012.12.015  0.357
2013 Chou S, Upton H, Bao K, Schulze-Gahmen U, Samelson AJ, He N, Nowak A, Lu H, Krogan NJ, Zhou Q, Alber T. HIV-1 Tat recruits transcription elongation factors dispersed along a flexible AFF4 scaffold. Proceedings of the National Academy of Sciences of the United States of America. 110: E123-31. PMID 23251033 DOI: 10.1073/Pnas.1216971110  0.325
2012 Cozzi R, Prigozhin D, Rosini R, Abate F, Bottomley MJ, Grandi G, Telford JL, Rinaudo CD, Maione D, Alber T. Structural basis for group B streptococcus pilus 1 sortases C regulation and specificity. Plos One. 7: e49048. PMID 23145064 DOI: 10.1371/Journal.Pone.0049048  0.389
2012 Lee HJ, Lang PT, Fortune SM, Sassetti CM, Alber T. Cyclic AMP regulation of protein lysine acetylation in Mycobacterium tuberculosis. Nature Structural & Molecular Biology. 19: 811-8. PMID 22773105 DOI: 10.1038/Nsmb.2318  0.471
2012 Cavazos A, Prigozhin DM, Alber T. Structure of the sensor domain of Mycobacterium tuberculosis PknH receptor kinase reveals a conserved binding cleft. Journal of Molecular Biology. 422: 488-94. PMID 22727744 DOI: 10.1016/J.Jmb.2012.06.011  0.424
2012 Totir M, Echols N, Nanao M, Gee CL, Moskaleva A, Gradia S, Iavarone AT, Berger JM, May AP, Zubieta C, Alber T. Macro-to-micro structural proteomics: native source proteins for high-throughput crystallization. Plos One. 7: e32498. PMID 22393408 DOI: 10.1371/Journal.Pone.0032498  0.388
2012 Tosha T, Behera RK, Ng HL, Bhattasali O, Alber T, Theil EC. Ferritin protein nanocage ion channels: gating by N-terminal extensions. The Journal of Biological Chemistry. 287: 13016-25. PMID 22362775 DOI: 10.1074/Jbc.M111.332734  0.598
2012 Gee CL, Papavinasasundaram KG, Blair SR, Baer CE, Falick AM, King DS, Griffin JE, Venghatakrishnan H, Zukauskas A, Wei JR, Dhiman RK, Crick DC, Rubin EJ, Sassetti CM, Alber T. A phosphorylated pseudokinase complex controls cell wall synthesis in mycobacteria. Science Signaling. 5: ra7. PMID 22275220 DOI: 10.1126/Scisignal.2002525  0.396
2011 Fraser JS, Van Den Bedem H, Samelson AJ, Lang PT, Holton JM, Echols N, Alber T. Accessing protein conformational ensembles using room-temperature X-ray crystallography Proceedings of the National Academy of Sciences of the United States of America. 108: 16247-16252. PMID 21918110 DOI: 10.1073/Pnas.1111325108  0.729
2011 He N, Chan CK, Sobhian B, Chou S, Xue Y, Liu M, Alber T, Benkirane M, Zhou Q. Human Polymerase-Associated Factor complex (PAFc) connects the Super Elongation Complex (SEC) to RNA polymerase II on chromatin. Proceedings of the National Academy of Sciences of the United States of America. 108: E636-45. PMID 21873227 DOI: 10.1073/Pnas.1107107108  0.338
2011 Chou S, Krasileva KV, Holton JM, Steinbrenner AD, Alber T, Staskawicz BJ. Hyaloperonospora arabidopsidis ATR1 effector is a repeat protein with distributed recognition surfaces. Proceedings of the National Academy of Sciences of the United States of America. 108: 13323-8. PMID 21788488 DOI: 10.1073/Pnas.1109791108  0.667
2011 Sharma AK, Ye L, Baer CE, Shanmugasundaram K, Alber T, Alper SL, Rigby AC. Solution structure of the guanine nucleotide-binding STAS domain of SLC26-related SulP protein Rv1739c from Mycobacterium tuberculosis. The Journal of Biological Chemistry. 286: 8534-44. PMID 21190940 DOI: 10.1074/Jbc.M110.165449  0.453
2011 Jäger S, Gulbahce N, Cimermancic P, Kane J, He N, Chou S, D'Orso I, Fernandes J, Jang G, Frankel AD, Alber T, Zhou Q, Krogan NJ. Purification and characterization of HIV-human protein complexes. Methods (San Diego, Calif.). 53: 13-9. PMID 20708689 DOI: 10.1016/J.Ymeth.2010.08.007  0.308
2010 Lombana TN, Echols N, Good MC, Thomsen ND, Ng HL, Greenstein AE, Falick AM, King DS, Alber T. Allosteric activation mechanism of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknB. Structure (London, England : 1993). 18: 1667-77. PMID 21134645 DOI: 10.1016/J.Str.2010.09.019  0.66
2010 Tosha T, Ng HL, Bhattasali O, Alber T, Theil EC. Moving metal ions through ferritin-protein nanocages from three-fold pores to catalytic sites. Journal of the American Chemical Society. 132: 14562-9. PMID 20866049 DOI: 10.1021/Ja105583D  0.574
2010 Lang PT, Ng HL, Fraser JS, Corn JE, Echols N, Sales M, Holton JM, Alber T. Automated electron-density sampling reveals widespread conformational polymorphism in proteins. Protein Science : a Publication of the Protein Society. 19: 1420-31. PMID 20499387 DOI: 10.1002/Pro.423  0.761
2010 Chou S, Jensen BC, Parsons M, Alber T, Grundner C. The Trypanosoma brucei life cycle switch TbPTP1 is structurally conserved and dephosphorylates the nucleolar protein NOPP44/46. The Journal of Biological Chemistry. 285: 22075-81. PMID 20444707 DOI: 10.1074/Jbc.M110.108860  0.42
2010 Flynn EM, Hanson JA, Alber T, Yang H. Dynamic active-site protection by the M. tuberculosis protein tyrosine phosphatase PtpB lid domain. Journal of the American Chemical Society. 132: 4772-80. PMID 20230004 DOI: 10.1021/Ja909968N  0.367
2009 Fraser JS, Clarkson MW, Degnan SC, Erion R, Kern D, Alber T. Hidden alternative structures of proline isomerase essential for catalysis Nature. 462: 669-673. PMID 19956261 DOI: 10.1038/Nature08615  0.595
2009 Lin MZ, McKeown MR, Ng HL, Aguilera TA, Shaner NC, Campbell RE, Adams SR, Gross LA, Ma W, Alber T, Tsien RY. Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals. Chemistry & Biology. 16: 1169-79. PMID 19942140 DOI: 10.1016/J.Chembiol.2009.10.009  0.568
2009 Alber T. Signaling mechanisms of the Mycobacterium tuberculosis receptor Ser/Thr protein kinases. Current Opinion in Structural Biology. 19: 650-7. PMID 19914822 DOI: 10.1016/J.Sbi.2009.10.017  0.413
2009 Rawls KA, Lang PT, Takeuchi J, Imamura S, Baguley TD, Grundner C, Alber T, Ellman JA. Fragment-based discovery of selective inhibitors of the Mycobacterium tuberculosis protein tyrosine phosphatase PtpA. Bioorganic & Medicinal Chemistry Letters. 19: 6851-4. PMID 19889539 DOI: 10.1016/J.Bmcl.2009.10.090  0.317
2009 Greenstein AE, Hammel M, Cavazos A, Alber T. Interdomain communication in the Mycobacterium tuberculosis environmental phosphatase Rv1364c. The Journal of Biological Chemistry. 284: 29828-35. PMID 19700407 DOI: 10.1074/Jbc.M109.056168  0.398
2009 Tosha T, Ng H, Bhattasali O, Alber T, Theil E. 3P-032 Atomic Resolution Structures Indicate A Molecular Mechanism for Iron Release Through Functional Pore in Ferritin.(Protein:Structure & Function,The 47th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 49: S156. DOI: 10.2142/Biophys.49.S156_2  0.329
2009 Clarkson MW, Fraser J, Alber T, Kern D. Cyclophilin Dynamics and Catalysis are Mechanistically Linked Biophysical Journal. 96: 555a. DOI: 10.1016/J.Bpj.2008.12.3644  0.556
2008 Mieczkowski C, Iavarone AT, Alber T. Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase. The Embo Journal. 27: 3186-97. PMID 19008858 DOI: 10.1038/Emboj.2008.236  0.377
2008 Barth P, Schoeffler A, Alber T. Targeting metastable coiled-coil domains by computational design. Journal of the American Chemical Society. 130: 12038-44. PMID 18698842 DOI: 10.1021/Ja802447E  0.392
2008 Bertin A, McMurray MA, Grob P, Park SS, Garcia G, Patanwala I, Ng HL, Alber T, Thorner J, Nogales E. Saccharomyces cerevisiae septins: supramolecular organization of heterooligomers and the mechanism of filament assembly. Proceedings of the National Academy of Sciences of the United States of America. 105: 8274-9. PMID 18550837 DOI: 10.1073/Pnas.0803330105  0.6
2008 Alber T, Gilbert WA, Ringe Ponzi DR, Petsko GA. The Role of Mobility in the Substrate Binding and Catalytic Machinery of Enzymes Ciba Foundation Symposium 93 - Mobility and Function in Proteins and Nucleic Acids. 4-24. DOI: 10.1002/9780470720752.ch2  0.415
2007 Murillo AC, Li HY, Alber T, Baker EN, Berger JM, Cherney LT, Cherney MM, Cho YS, Eisenberg D, Garen CR, Goulding CW, Hung LW, Ioerger TR, Jacobs WR, James MN, et al. High throughput crystallography of TB drug targets. Infectious Disorders Drug Targets. 7: 127-39. PMID 17970224 DOI: 10.2174/187152607781001853  0.436
2007 Sales M, Plecs JJ, Holton JM, Alber T. Structure of a designed, right-handed coiled-coil tetramer containing all biological amino acids. Protein Science : a Publication of the Protein Society. 16: 2224-32. PMID 17766380 DOI: 10.1110/Ps.062702907  0.64
2007 Fraser JS, Merlie JP, Echols N, Weisfield SR, Mignot T, Wemmer DE, Zusman DR, Alber T. An atypical receiver domain controls the dynamic polar localization of the Myxococcus xanthus social motility protein FrzS. Molecular Microbiology. 65: 319-32. PMID 17573816 DOI: 10.1111/J.1365-2958.2007.05785.X  0.618
2007 Grundner C, Perrin D, Hooft van Huijsduijnen R, Swinnen D, Gonzalez J, Gee CL, Wells TN, Alber T. Structural basis for selective inhibition of Mycobacterium tuberculosis protein tyrosine phosphatase PtpB. Structure (London, England : 1993). 15: 499-509. PMID 17437721 DOI: 10.1016/J.Str.2007.03.003  0.41
2007 Greenstein AE, MacGurn JA, Baer CE, Falick AM, Cox JS, Alber T. M. tuberculosis Ser/Thr protein kinase D phosphorylates an anti-anti-sigma factor homolog. Plos Pathogens. 3: e49. PMID 17411339 DOI: 10.1371/Journal.Ppat.0030049  0.345
2007 Cellitti J, Llinas M, Echols N, Shank EA, Gillespie B, Kwon E, Crowder SM, Dahlquist FW, Alber T, Marqusee S. Exploring subdomain cooperativity in T4 lysozyme I: structural and energetic studies of a circular permutant and protein fragment. Protein Science : a Publication of the Protein Society. 16: 842-51. PMID 17400926 DOI: 10.1110/Ps.062628607  0.438
2007 Barth P, Alber T, Harbury PB. Accurate, conformation-dependent predictions of solvent effects on protein ionization constants. Proceedings of the National Academy of Sciences of the United States of America. 104: 4898-903. PMID 17360348 DOI: 10.1073/Pnas.0700188104  0.348
2007 Greenstein AE, Echols N, Lombana TN, King DS, Alber T. Allosteric activation by dimerization of the PknD receptor Ser/Thr protein kinase from Mycobacterium tuberculosis. The Journal of Biological Chemistry. 282: 11427-35. PMID 17242402 DOI: 10.1074/Jbc.M610193200  0.413
2006 Gay LM, Ng HL, Alber T. A conserved dimer and global conformational changes in the structure of apo-PknE Ser/Thr protein kinase from Mycobacterium tuberculosis. Journal of Molecular Biology. 360: 409-20. PMID 16762364 DOI: 10.1016/J.Jmb.2006.05.015  0.687
2005 Greenstein AE, Grundner C, Echols N, Gay LM, Lombana TN, Miecskowski CA, Pullen KE, Sung PY, Alber T. Structure/function studies of Ser/Thr and Tyr protein phosphorylation in Mycobacterium tuberculosis. Journal of Molecular Microbiology and Biotechnology. 9: 167-81. PMID 16415590 DOI: 10.1159/000089645  0.805
2005 Grundner C, Ng HL, Alber T. Mycobacterium tuberculosis protein tyrosine phosphatase PtpB structure reveals a diverged fold and a buried active site. Structure (London, England : 1993). 13: 1625-34. PMID 16271885 DOI: 10.1016/J.Str.2005.07.017  0.667
2005 Grundner C, Gay LM, Alber T. Mycobacterium tuberculosis serine/threonine kinases PknB, PknD, PknE, and PknF phosphorylate multiple FHA domains. Protein Science : a Publication of the Protein Society. 14: 1918-21. PMID 15987910 DOI: 10.1110/Ps.051413405  0.351
2005 Yuan M, Deleuil F, Fällman M, Herro R, Cossart P, Buchrieser C, Gouin E, Glaser P, Deutscher J, Echols N, Lombana TN, Miecskowski CA, Pullen KE, Sung P, Alber T, et al. Contents Vol. 9, 2005 Journal of Molecular Microbiology and Biotechnology. 9: 239-240. DOI: 10.1159/000091040  0.722
2005 Yuan M, Deleuil F, Fällman M, Herro R, Cossart P, Buchrieser C, Gouin E, Glaser P, Deutscher J, Echols N, Lombana TN, Miecskowski CA, Pullen KE, Sung P, Alber T, et al. Subject Index Vol. 9, 2005 Journal of Molecular Microbiology and Biotechnology. 9: 238-238. DOI: 10.1159/000091039  0.724
2004 Pullen KE, Ng HL, Sung PY, Good MC, Smith SM, Alber T. An alternate conformation and a third metal in PstP/Ppp, the M. tuberculosis PP2C-Family Ser/Thr protein phosphatase. Structure (London, England : 1993). 12: 1947-54. PMID 15530359 DOI: 10.1016/J.Str.2004.09.008  0.796
2004 MacDowell AA, Celestre RS, Howells M, McKinney W, Krupnick J, Cambie D, Domning EE, Duarte RM, Kelez N, Plate DW, Cork CW, Earnest TN, Dickert J, Meigs G, Ralston C, ... ... Alber T, et al. Suite of three protein crystallography beamlines with single superconducting bend magnet as the source. Journal of Synchrotron Radiation. 11: 447-55. PMID 15496731 DOI: 10.1107/S0909049504024835  0.6
2004 Plecs JJ, Harbury PB, Kim PS, Alber T. Structural test of the parameterized-backbone method for protein design. Journal of Molecular Biology. 342: 289-97. PMID 15313624 DOI: 10.1016/J.Jmb.2004.06.051  0.435
2004 Versele M, Gullbrand B, Shulewitz MJ, Cid VJ, Bahmanyar S, Chen RE, Barth P, Alber T, Thorner J. Protein-protein interactions governing septin heteropentamer assembly and septin filament organization in Saccharomyces cerevisiae. Molecular Biology of the Cell. 15: 4568-83. PMID 15282341 DOI: 10.1091/Mbc.E04-04-0330  0.34
2004 Rose RB, Pullen KE, Bayle JH, Crabtree GR, Alber T. Biochemical and structural basis for partially redundant enzymatic and transcriptional functions of DCoH and DCoH2. Biochemistry. 43: 7345-55. PMID 15182178 DOI: 10.1021/Bi049620T  0.785
2004 Good MC, Greenstein AE, Young TA, Ng HL, Alber T. Sensor domain of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknD, forms a highly symmetric beta propeller. Journal of Molecular Biology. 339: 459-69. PMID 15136047 DOI: 10.1016/J.Jmb.2004.03.063  0.635
2004 Holton J, Alber T. Automated protein crystal structure determination using ELVES. Proceedings of the National Academy of Sciences of the United States of America. 101: 1537-42. PMID 14752198 DOI: 10.1073/Pnas.0306241101  0.676
2003 Terwilliger TC, Park MS, Waldo GS, Berendzen J, Hung LW, Kim CY, Smith CV, Sacchettini JC, Bellinzoni M, Bossi R, De Rossi E, Mattevi A, Milano A, Riccardi G, Rizzi M, ... Alber T, et al. The TB structural genomics consortium: a resource for Mycobacterium tuberculosis biology. Tuberculosis (Edinburgh, Scotland). 83: 223-49. PMID 12906835 DOI: 10.1016/S1472-9792(03)00051-9  0.495
2003 Young TA, Delagoutte B, Endrizzi JA, Falick AM, Alber T. Structure of Mycobacterium tuberculosis PknB supports a universal activation mechanism for Ser/Thr protein kinases. Nature Structural Biology. 10: 168-74. PMID 12548283 DOI: 10.1038/Nsb897  0.445
2002 Goulding CW, Apostol M, Anderson DH, Gill HS, Smith CV, Kuo MR, Yang JK, Waldo GS, Suh SW, Chauhan R, Kale A, Bachhawat N, Mande SC, Johnston JM, Lott JS, ... Alber T, et al. The TB structural genomics consortium: providing a structural foundation for drug discovery. Current Drug Targets. Infectious Disorders. 2: 121-41. PMID 12462144 DOI: 10.2174/1568005023342551  0.509
2001 Corbett KD, Alber T. The many faces of Ras: recognition of small GTP-binding proteins. Trends in Biochemical Sciences. 26: 710-6. PMID 11738594 DOI: 10.1016/S0968-0004(01)01974-0  0.406
2001 Crowder S, Holton J, Alber T. Covariance analysis of RNA recognition motifs identifies functionally linked amino acids Journal of Molecular Biology. 310: 793-800. PMID 11453688 DOI: 10.1006/Jmbi.2001.4740  0.622
2001 Lougheed JC, Holton JM, Alber T, Bazan JF, Handel TM. Structure of melanoma inhibitory activity protein, a member of a recently identified family of secreted proteins. Proceedings of the National Academy of Sciences of the United States of America. 98: 5515-20. PMID 11331761 DOI: 10.1073/Pnas.091601698  0.682
2001 Rose RB, Endrizzi JA, Cronk JD, Holton J, Alber T. High-resolution structure of the HNF-1 alpha dimerization domain (vol. 39, pg. 15062, 2000) Biochemistry. 40. DOI: 10.1021/Bi0151263  0.624
2000 Rose RB, Endrizzi JA, Cronk JD, Holton J, Alber T. High-resolution structure of the HNF-1alpha dimerization domain. Biochemistry. 39: 15062-70. PMID 11106484 DOI: 10.1021/Bi001996T  0.776
2000 Muller KM, Arndt KM, Alber T. Protein fusions to coiled-coil domains Methods in Enzymology. 328: 261-282. PMID 11075350 DOI: 10.1016/S0076-6879(00)28402-4  0.395
2000 Rose RB, Bayle JH, Endrizzi JA, Cronk JD, Crabtree GR, Alber T. Structural basis of dimerization, coactivator recognition and MODY3 mutations in HNF-1alpha. Nature Structural Biology. 7: 744-8. PMID 10966642 DOI: 10.1038/78966  0.675
2000 Day CL, Alber T. Crystal structure of the amino-terminal coiled-coil domain of the APC tumor suppressor Journal of Molecular Biology. 301: 147-156. PMID 10926498 DOI: 10.1006/Jmbi.2000.3895  0.42
2000 Endrizzi JA, Beernink PT, Alber T, Schachman HK. Binding of bisubstrate analog promotes large structural changes in the unregulated catalytic trimer of aspartate transcarbamoylase: implications for allosteric regulation. Proceedings of the National Academy of Sciences of the United States of America. 97: 5077-82. PMID 10805770 DOI: 10.1073/Pnas.090087197  0.4
2000 Arndt KM, Pelletier JN, Müller KM, Alber T, Michnick SW, Plückthun A. A heterodimeric coiled-coil peptide pair selected in vivo from a designed library-versus-library ensemble. Journal of Molecular Biology. 295: 627-39. PMID 10623552 DOI: 10.1006/Jmbi.1999.3352  0.307
2000 Alber T. The last days of crystallography Structure. 8: R187-R188. DOI: 10.1016/S0969-2126(00)00192-1  0.392
1999 McWhirter SM, Pullen SS, Werneburg BG, Labadia ME, Ingraham RH, Crute JJ, Kehry MR, Alber T. Structural and biochemical analysis of signal transduction by the TRAF family of adapter proteins. Cold Spring Harbor Symposia On Quantitative Biology. 64: 551-62. PMID 11232332 DOI: 10.1101/Sqb.1999.64.551  0.691
1999 Pullen SS, Labadia ME, Ingraham RH, McWhirter SM, Everdeen DS, Alber T, Crute JJ, Kehry MR. High-affinity interactions of tumor necrosis factor receptor-associated factors (TRAFs) and CD40 require TRAF trimerization and CD40 multimerization. Biochemistry. 38: 10168-77. PMID 10433725 DOI: 10.1021/Bi9909905  0.675
1999 McWhirter SM, Pullen SS, Holton JM, Crute JJ, Kehry MR, Alber T. Crystallographic analysis of CD40 recognition and signaling by human TRAF2. Proceedings of the National Academy of Sciences of the United States of America. 96: 8408-13. PMID 10411888 DOI: 10.1073/Pnas.96.15.8408  0.763
1999 Hershey PE, McWhirter SM, Gross JD, Wagner G, Alber T, Sachs AB. The Cap-binding protein eIF4E promotes folding of a functional domain of yeast translation initiation factor eIF4G1. The Journal of Biological Chemistry. 274: 21297-304. PMID 10409688 DOI: 10.1074/Jbc.274.30.21297  0.723
1999 Beernink PT, Endrizzi JA, Alber T, Schachman HK. Assessment of the allosteric mechanism of aspartate transcarbamoylase based on the crystalline structure of the unregulated catalytic subunit Proceedings of the National Academy of Sciences of the United States of America. 96: 5388-5393. PMID 10318893 DOI: 10.1073/Pnas.96.10.5388  0.333
1999 Crowder SM, Kanaar R, Rio DC, Alber T. Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal. Proceedings of the National Academy of Sciences of the United States of America. 96: 4892-7. PMID 10220389 DOI: 10.1073/Pnas.96.9.4892  0.349
1999 Nautiyal S, Alber T. Crystal structure of a designed, thermostable, heterotrimeric coiled coil Protein Science. 8: 84-90. PMID 10210186 DOI: 10.1110/Ps.8.1.84  0.417
1998 Harbury PB, Plecs JJ, Tidor B, Alber T, Kim PS. High-resolution protein design with backbone freedom. Science (New York, N.Y.). 282: 1462-7. PMID 9822371 DOI: 10.1126/Science.282.5393.1462  0.385
1998 Sharma VA, Logan J, King DS, White R, Alber T. Sequence-based design of a peptide probe for the APC tumor suppressor protein Current Biology. 8: 823-830. PMID 9663391 DOI: 10.1016/S0960-9822(98)70324-0  0.337
1996 Gonzalez L, Woolfson DN, Alber T. Buried polar residues and structural specificity in the GCN4 leucine zipper Nature Structural Biology. 3: 1011-1018. PMID 8946854 DOI: 10.1038/Nsb1296-1011  0.376
1996 Gonzalez L, Brown RA, Richardson D, Alber T. Crystal structures of a single coiled-coil peptide in two oligomeric states reveal the basis for structural polymorphism Nature Structural Biology. 3: 1002-1010. PMID 8946853 DOI: 10.1038/Nsb1296-1002  0.434
1996 Cronk JD, Endrizzi JA, Alber T. High-resolution structures of the bifunctional enzyme and transcriptional coactivator DCoH and its complex with a product analogue Protein Science. 5: 1963-1972. PMID 8897596 DOI: 10.1002/Pro.5560051002  0.478
1996 Gonzalez L, Plecs JJ, Alber T. An engineered allosteric switch in leucine-zipper oligomerization Nature Structural Biology. 3: 510-515. PMID 8646536 DOI: 10.1038/Nsb0696-510  0.396
1996 Woolfson DN, Alber T. Sequence determinants of oligomer selection in coiled coils Techniques in Protein Chemistry. 7: 409-418. DOI: 10.1016/S1080-8914(96)80045-7  0.32
1995 Endrizzi JA, Cronk JD, Wang W, Crabtree GR, Alber T. Crystal structure of DCoH, a bifunctional, protein-binding transcriptional coactivator. Science (New York, N.Y.). 268: 556-9. PMID 7725101 DOI: 10.1126/Science.7725101  0.442
1995 Petersen JM, Skalicky JJ, Donaldson LW, McIntosh LP, Alber T, Gravest BJ. Modulation of transcription factor Ets-1 DNA binding: DNA-induced unfolding of an α helix Science. 269: 1866-1869. PMID 7569926 DOI: 10.1126/Science.7569926  0.335
1994 Harbury PB, Kim PS, Alber T. Crystal structure of an isoleucine-zipper trimer Nature. 371: 80-83. PMID 8072533 DOI: 10.1038/371080A0  0.439
1994 Zhang T, Bertelsen E, Alber T. Entropie effects of disulphide bonds on protein stability Nature Structural Biology. 1: 434-438. PMID 7664061 DOI: 10.1038/Nsb0794-434  0.347
1993 Harbury PB, Zhang T, Kim PS, Alber T. a switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants Science. 262: 1401-1407. PMID 8248779 DOI: 10.1126/Science.8248779  0.437
1993 Joslyn G, Richardson DS, White R, Alber T. Dimer formation by an N-terminal coiled coil in the APC protein. Proceedings of the National Academy of Sciences of the United States of America. 90: 11109-13. PMID 8248216 DOI: 10.1073/Pnas.90.23.11109  0.376
1993 Zhang T, Bertelsen E, Benvegnu D, Alber T. Circular permutation of T4 lysozyme Biochemistry. 32: 12311-12318. PMID 8241117 DOI: 10.1021/Bi00097A006  0.425
1992 Alber T. Structure of the leucine zipper Current Opinion in Genetics and Development. 2: 205-210. PMID 1638114 DOI: 10.1016/S0959-437X(05)80275-8  0.371
1992 Alber T. Structure of the leucine zipper Current Biology. 2: 265. DOI: 10.1016/0960-9822(92)90381-J  0.345
1991 Rasmussen R, Benvegnu D, O'Shea EK, Kim PS, Alber T. X-ray scattering indicates that the leucine zipper is a coiled coil. Proceedings of the National Academy of Sciences of the United States of America. 88: 561-4. PMID 1988953 DOI: 10.1073/Pnas.88.2.561  0.359
1991 Klemm JD, Wozniak JA, Alber T, Goldenberg DP. Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates. Biochemistry. 30: 589-94. PMID 1988046 DOI: 10.1021/Bi00216A038  0.325
1991 O'Shea EK, Klemm JD, Kim PS, Alber T. X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil. Science (New York, N.Y.). 254: 539-44. PMID 1948029 DOI: 10.1126/Science.1948029  0.392
1991 Daopin S, Alber T, Baase WA, Wozniak JA, Matthews BW. Structural and thermodynamic analysis of the packing of two α-helices in bacteriophage T4 lysozyme Journal of Molecular Biology. 221: 647-667. PMID 1920439 DOI: 10.1016/0022-2836(91)80079-A  0.507
1988 Alber T, Bell JA, Dao-Pin S, Nicholson H, Wozniak JA, Cook S, Matthews BW. Replacements of Pro86 in phage T4 lysozyme extend an α-helix but do not alter protein stability Science. 239: 631-635. PMID 3277275 DOI: 10.1126/Science.3277275  0.528
1987 Alber T, Sun DP, Nye JA, Muchmore DC, Matthews BW. Temperature-sensitive mutations of bacteriophage T4 lysozyme occur at sites with low mobility and low solvent accessibility in the folded protein. Biochemistry. 26: 3754-8. PMID 3651410 DOI: 10.1021/Bi00387A002  0.505
1987 Dao-Pin S, Alber T, Bell JA, Weaver LH, Matthews BW. Use of site-directed mutagenesis to obtain isomorphous heavy-atom derivatives for protein crystallography: Cysteine-containing mutants of phage t4 lysozyme Protein Engineering, Design and Selection. 1: 115-123. PMID 3507694 DOI: 10.1093/Protein/1.2.115  0.447
1987 Alber TC, Davenport RC, Giammona DA, Lolis E, Petsko GA, Ringe D. Crystallography and site-directed mutagenesis of yeast triosephosphate isomerase: what can we learn about catalysis from a "simple" enzyme? Cold Spring Harbor Symposia On Quantitative Biology. 52: 603-13. PMID 3331346 DOI: 10.1101/Sqb.1987.052.01.069  0.599
1987 Alber T, Matthews BW. [27] Structure and thermal stability of phage T4 lysozyme Methods in Enzymology. 154: 511-533. PMID 3323816 DOI: 10.1016/0076-6879(87)54093-9  0.549
1987 Alber T, Sun DP, Wilson K, Wozniak JA, Cook SP, Matthews BW. Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme. Nature. 330: 41-6. PMID 3118211 DOI: 10.1038/330041A0  0.463
1987 Alber T, Bell J, Cook S, Nye JA, Daopin S, Wilson K, Wozniak J, Matthews BW. Correlations between structure and thermodynamic stability of phage T4 lysozyme Acta Crystallographica Section a Foundations of Crystallography. 43: C15-C15. DOI: 10.1107/S0108767387085131  0.43
1985 Alber T, Wozniak JA. A genetic screen for mutations that increase the thermal stability of phage T4 lysozyme Proceedings of the National Academy of Sciences of the United States of America. 82: 747-750. PMID 3856227 DOI: 10.1073/Pnas.82.3.747  0.324
1981 Alber T, Fahnestock M, Mowbray SL, Petsko GA. Preliminary x-ray data for the galactose binding protein from Salmonella typhimurium. Journal of Molecular Biology. 147: 471-4. PMID 7031261 DOI: 10.1016/0022-2836(81)90497-6  0.657
1981 Alber T, Banner DW, Bloomer AC, Petsko GA, Phillips D, Rivers PS, Wilson IA. On the three-dimensional structure and catalytic mechanism of triose phosphate isomerase Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences. 293: 159-171. PMID 6115415 DOI: 10.1098/Rstb.1981.0069  0.635
1976 Alber T, Petsko GA, Tsernoglou D. Crystal structure of elastase-substrate complex at -55 °C Nature. 263: 297-300. PMID 958484 DOI: 10.1038/263297A0  0.442
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