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Douglas M. Freymann - Publications

Affiliations: 
Molecular Pharmacology and Biological Chemistry Northwestern University, Evanston, IL 
Area:
structural basis for interactions between proteins, and between proteins and small molecules
Website:
https://fsmweb.northwestern.edu/faculty/FacultyProfile.cfm?xid=10268

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Smith KP, Focia PJ, Chakravarthy S, Landahl EC, Klosowiak JL, Rice SE, Freymann DM. Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase. Journal of Structural Biology. 212: 107656. PMID 33132189 DOI: 10.1016/j.jsb.2020.107656  0.398
2018 Yeung PS, Yamashita M, Ing CE, Pomès R, Freymann DM, Prakriya M. Mapping the functional anatomy of Orai1 transmembrane domains for CRAC channel gating. Proceedings of the National Academy of Sciences of the United States of America. PMID 29760086 DOI: 10.1073/Pnas.1718373115  0.417
2017 Smith KP, Focia PJ, Zhang Y, Klosowiak JL, Freymann DM, Rice SE. The Two GTPase Domains of the Outer Mitochondrial Membrane Protein Miro have Novel Active Site Conformations and Distinct Biochemical Properties Biophysical Journal. 112: 177a-178a. DOI: 10.1016/J.Bpj.2016.11.982  0.46
2016 Klosowiak JL, Park S, Smith KP, French ME, Focia PJ, Freymann DM, Rice SE. Structural insights into Parkin substrate lysine targeting from minimal Miro substrates. Scientific Reports. 6: 33019. PMID 27605430 DOI: 10.1038/Srep33019  0.417
2015 Klosowiak J, Focia P, Chakravarthy S, Freymann D, Rice S. Structures of Human Miro1 Reveal Conformational Changes Biophysical Journal. 108: 155a. DOI: 10.1016/J.Bpj.2014.11.853  0.424
2013 Klosowiak JL, Focia PJ, Chakravarthy S, Landahl EC, Freymann DM, Rice SE. Structural coupling of the EF hand and C-terminal GTPase domains in the mitochondrial protein Miro. Embo Reports. 14: 968-74. PMID 24071720 DOI: 10.1038/Embor.2013.151  0.462
2013 Klosowiak JL, Focia PJ, Gonzalez MC, Sato C, Freymann DM, Rice SE. Miro: A Driver of the Kinesin Motor Biophysical Journal. 104: 40a. DOI: 10.1016/J.Bpj.2012.11.259  0.374
2012 Freymann DM, Nakamura Y, Focia PJ, Sakai R, Swanson GT. Structure of a tetrameric galectin from Cinachyrella sp. (ball sponge). Acta Crystallographica. Section D, Biological Crystallography. 68: 1163-74. PMID 22948917 DOI: 10.1107/S0907444912022834  0.422
2008 Ramirez UD, Focia PJ, Freymann DM. Nucleotide-binding flexibility in ultrahigh-resolution structures of the SRP GTPase Ffh. Acta Crystallographica. Section D, Biological Crystallography. 64: 1043-53. PMID 18931411 DOI: 10.1107/S090744490802444X  0.798
2007 Gawronski-Salerno J, Coon JS, Focia PJ, Freymann DM. X-ray structure of the T. aquaticus FtsY:GDP complex suggests functional roles for the C-terminal helix of the SRP GTPases. Proteins. 66: 984-95. PMID 17186523 DOI: 10.1002/Prot.21200  0.535
2007 Gawronski-Salerno J, Freymann DM. Structure of the GMPPNP-stabilized NG domain complex of the SRP GTPases Ffh and FtsY. Journal of Structural Biology. 158: 122-8. PMID 17184999 DOI: 10.1016/J.Jsb.2006.10.025  0.488
2006 Ramirez UD, Freymann DM. Analysis of protein hydration in ultrahigh-resolution structures of the SRP GTPase Ffh. Acta Crystallographica. Section D, Biological Crystallography. 62: 1520-34. PMID 17139088 DOI: 10.1107/S0907444906040807  0.772
2006 Focia PJ, Gawronski-Salerno J, Coon JS, Freymann DM. Structure of a GDP:AlF4 complex of the SRP GTPases Ffh and FtsY, and identification of a peripheral nucleotide interaction site. Journal of Molecular Biology. 360: 631-43. PMID 16780874 DOI: 10.1016/J.Jmb.2006.05.031  0.474
2004 Bibak N, Paul RM, Freymann DM, Yaseen NR. Purification of RanGDP, RanGTP, and RanGMPPNP by ion exchange chromatography. Analytical Biochemistry. 333: 57-64. PMID 15351280 DOI: 10.1016/J.Ab.2004.06.017  0.362
2004 Focia PJ, Shepotinovskaya IV, Seidler JA, Freymann DM. Heterodimeric GTPase core of the SRP targeting complex. Science (New York, N.Y.). 303: 373-7. PMID 14726591 DOI: 10.1126/Science.1090827  0.535
2004 Focia PJ, Alam H, Lu T, Ramirez UD, Freymann DM. Novel protein and Mg2+ configurations in the Mg2+GDP complex of the SRP GTPase ffh. Proteins. 54: 222-30. PMID 14696184 DOI: 10.1002/Prot.10598  0.793
2003 Shepotinovskaya IV, Focia PJ, Freymann DM. Crystallization of the GMPPCP complex of the NG domains of Thermus aquaticus Ffh and FtsY. Acta Crystallographica. Section D, Biological Crystallography. 59: 1834-7. PMID 14501130 DOI: 10.1107/S0907444903016573  0.47
2002 Ramirez UD, Minasov G, Focia PJ, Stroud RM, Walter P, Kuhn P, Freymann DM. Structural basis for mobility in the 1.1 A crystal structure of the NG domain of Thermus aquaticus Ffh. Journal of Molecular Biology. 320: 783-99. PMID 12095255 DOI: 10.1016/S0022-2836(02)00476-X  0.776
2002 Shepotinovskaya IV, Freymann DM. Conformational change of the N-domain on formation of the complex between the GTPase domains of Thermus aquaticus Ffh and FtsY. Biochimica Et Biophysica Acta. 1597: 107-14. PMID 12009409 DOI: 10.1016/S0167-4838(02)00287-X  0.486
2002 Murthy SN, Iismaa S, Begg G, Freymann DM, Graham RM, Lorand L. Conserved tryptophan in the core domain of transglutaminase is essential for catalytic activity. Proceedings of the National Academy of Sciences of the United States of America. 99: 2738-42. PMID 11867764 DOI: 10.1073/Pnas.052715799  0.46
2001 Padmanabhan S, Freymann DM. The conformation of bound GMPPNP suggests a mechanism for gating the active site of the SRP GTPase. Structure (London, England : 1993). 9: 859-67. PMID 11566135 DOI: 10.1016/S0969-2126(01)00641-4  0.572
2001 Keenan RJ, Freymann DM, Stroud RM, Walter P. The signal recognition particle. Annual Review of Biochemistry. 70: 755-75. PMID 11395422 DOI: 10.1146/Annurev.Biochem.70.1.755  0.689
2000 Freymann DM, Wenck MA, Engel JC, Feng J, Focia PJ, Eakin AE, Craig SP. Efficient identification of inhibitors targeting the closed active site conformation of the HPRT from Trypanosoma cruzi. Chemistry & Biology. 7: 957-68. PMID 11137818 DOI: 10.1016/S1074-5521(00)00045-4  0.322
2000 Peluso P, Herschlag D, Nock S, Freymann DM, Johnson AE, Walter P. Role of 4.5S RNA in assembly of the bacterial signal recognition particle with its receptor. Science (New York, N.Y.). 288: 1640-3. PMID 10834842 DOI: 10.1126/Science.288.5471.1640  0.723
2000 Anderson AC, Perry KM, Freymann DM, Stroud RM. The crystal structure of thymidylate synthase from Pneumocystis carinii reveals a fungal insert important for drug design. Journal of Molecular Biology. 297: 645-57. PMID 10731418 DOI: 10.1006/Jmbi.2000.3544  0.646
1999 Schmitz U, Behrens S, Freymann DM, Keenan RJ, Lukavsky P, Walter P, James TL. Structure of the phylogenetically most conserved domain of SRP RNA. Rna (New York, N.Y.). 5: 1419-29. PMID 10580470 DOI: 10.1017/S1355838299991458  0.687
1999 Freymann DM, Keenan RJ, Stroud RM, Walter P. Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP. Nature Structural Biology. 6: 793-801. PMID 10426959 DOI: 10.1038/11572  0.769
1998 Stroud RM, Reiling K, Wiener M, Freymann D. Ion-channel-forming colicins. Current Opinion in Structural Biology. 8: 525-33. PMID 9729746 DOI: 10.1016/S0959-440X(98)80132-2  0.683
1998 Keenan RJ, Freymann DM, Walter P, Stroud RM. Crystal structure of the signal sequence binding subunit of the signal recognition particle. Cell. 94: 181-91. PMID 9695947 DOI: 10.1016/S0092-8674(00)81418-X  0.745
1997 Wiener M, Freymann D, Ghosh P, Stroud RM. Crystal structure of colicin Ia. Nature. 385: 461-4. PMID 9009197 DOI: 10.1038/385461A0  0.754
1997 Freymann DM, Keenan RJ, Stroud RM, Walter P. Structure of the conserved GTPase domain of the signal recognition particle. Nature. 385: 361-4. PMID 9002524 DOI: 10.1038/385361A0  0.768
1997 Keenan R, Freymann D, Walter P, Stroud R. Structure of the signal sequence recognition protein, Ffh Faseb Journal. 11: A1064.  0.341
1996 Schmitz U, Freymann DM, James TL, Keenan RJ, Vinayak R, Walter P. NMR studies of the most conserved RNA domain of the mammalian signal recognition particle (SRP). Rna (New York, N.Y.). 2: 1213-27. PMID 8972771  0.657
1996 Freymann D, Keenan R, Stroud R, Walter P. Progress torwards the crystal structure of Ffh, the bacterial homolog of SRP54 Acta Crystallographica Section a Foundations of Crystallography. 52: C167-C167. DOI: 10.1107/S0108767396092574  0.698
1996 Wiener M, Freymann D, Ghosh P, Stroud R. The crystal structure of colicin IA Acta Crystallographica Section a Foundations of Crystallography. 52: C173-C173. DOI: 10.1107/S0108767396092379  0.726
1996 Focia PJ, Freymann DM, Somoza JR, Wang CC, Fletterick RJ. The 1.8 Å resolution crystal structure of HGPRTase from the human parasiteSchistosoma mansoniwith bound inhibitor Acta Crystallographica Section a Foundations of Crystallography. 52: C233-C233. DOI: 10.1107/S0108767396090083  0.389
1993 Bernstein HD, Zopf D, Freymann DM, Walter P. Functional substitution of the signal recognition particle 54-kDa subunit by its Escherichia coli homolog. Proceedings of the National Academy of Sciences of the United States of America. 90: 5229-33. PMID 8389475 DOI: 10.1073/Pnas.90.11.5229  0.592
1990 Freymann D, Down J, Carrington M, Roditi I, Turner M, Wiley D. 2·9 Å resolution structure of the N-terminal domain of a variant surface glycoprotein from Trypanosoma brucei Journal of Molecular Biology. 216: 141-160. PMID 2231728 DOI: 10.1016/S0022-2836(05)80066-X  0.64
1987 Metcalf P, Blum M, Freymann D, Turner M, Wiley DC. Two variant surface glycoproteins of Trypanosoma Brucei of different sequence classes have similar 6 Å resolution X-ray structures Nature. 325: 84-86. PMID 2432433 DOI: 10.1038/325084A0  0.617
1986 Durbin RM, Burns R, Moulai J, Metcalf P, Freymann D, Blum M, Anderson JE, Harrison SC, Wiley DC. Protein, DNA, and virus crystallography with a focused imaging proportional counter. Science (New York, N.Y.). 232: 1127-32. PMID 3704639 DOI: 10.1126/Science.3704639  0.529
1984 Freymann DM, Metcalf P, Turner M, Wiley DC. 6 A-resolution X-ray structure of a variable surface glycoprotein from Trypanosoma brucei. Nature. 311: 167-9. PMID 6472475 DOI: 10.1038/311167A0  0.654
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