| Year |
Citation |
Score |
| 2023 |
Meehan J, McDermott SM, Ivens A, Goodall Z, Chen Z, Yu Z, Woo J, Rodshagen T, McCleskey L, Sechrist R, Stuart K, Zeng L, Rouskin S, Savill NJ, Schnaufer A, ... ... Cruz-Reyes J, et al. Trypanosome RNA helicase KREH2 differentially controls non-canonical editing and putative repressive structure via a novel proposed 'bifunctional' gRNA in mRNA A6. Nucleic Acids Research. PMID 37246647 DOI: 10.1093/nar/gkad453 |
0.63 |
|
| 2020 |
Kumar V, Ivens A, Goodall Z, Meehan J, Doharey PK, Hillhouse A, Hurtado DO, Cai JJ, Zhang X, Schnaufer A, Cruz-Reyes J. Site-specific and mRNA-specific control of accurate mRNA editing by a helicase complex in trypanosomes. Rna (New York, N.Y.). PMID 32873716 DOI: 10.1261/Rna.076513.120 |
0.733 |
|
| 2020 |
Aphasizheva I, Alfonzo J, Carnes J, Cestari I, Cruz-Reyes J, Göringer HU, Hajduk S, Lukeš J, Madison-Antenucci S, Maslov DA, McDermott SM, Ochsenreiter T, Read LK, Salavati R, Schnaufer A, et al. Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes. Trends in Parasitology. 36: 337-355. PMID 32191849 DOI: 10.1016/J.Pt.2020.01.006 |
0.69 |
|
| 2019 |
Kumar V, Doharey PK, Gulati S, Meehan J, Martinez MG, Hughes K, Mooers BHM, Cruz-Reyes J. Protein features for assembly of the RNA editing helicase 2 subcomplex (REH2C) in Trypanosome holo-editosomes. Plos One. 14: e0211525. PMID 31034523 DOI: 10.1371/Journal.Pone.0211525 |
0.713 |
|
| 2018 |
Cruz-Reyes J, Mooers BHM, Doharey PK, Meehan J, Gulati S. Dynamic RNA holo-editosomes with subcomplex variants: Insights into the control of trypanosome editing. Wiley Interdisciplinary Reviews. Rna. e1502. PMID 30101566 DOI: 10.1002/wrna.1502 |
0.709 |
|
| 2017 |
Mooers B, Gulati S, Kumar V, Kanyumbu C, Lane D, Cruz-Reyes J. Atomic structures of kinetoplastid RNA editing sites Acta Crystallographica Section A. 73. DOI: 10.1107/S0108767317096283 |
0.548 |
|
| 2016 |
Cruz-Reyes J, Mooers BH, Abu-Adas Z, Kumar V, Gulati S. DEAH-RHA helicase•Znf cofactor systems in kinetoplastid RNA editing and evolutionarily distant RNA processes. Rna & Disease (Houston, Tex.). 3. PMID 27540585 DOI: 10.14800/Rd.1336 |
0.622 |
|
| 2016 |
Kumar V, Madina BR, Gulati S, Vashisht AA, Kanyumbu C, Pieters B, Shakir A, Wohlschlegel JA, Read LK, Mooers BH, Cruz-Reyes J. REH2C Helicase and GRBC Subcomplexes may Base Pair through mRNA and Small Guide RNA in Kinetoplastid Editosomes. The Journal of Biological Chemistry. PMID 26769962 DOI: 10.1074/Jbc.M115.708164 |
0.673 |
|
| 2015 |
Madina BR, Kumar V, Mooers BH, Cruz-Reyes J. Native Variants of the MRB1 Complex Exhibit Specialized Functions in Kinetoplastid RNA Editing. Plos One. 10: e0123441. PMID 25928631 DOI: 10.1371/Journal.Pone.0123441 |
0.747 |
|
| 2014 |
Madina BR, Kumar V, Metz R, Mooers BHM, Bundschuh R, Cruz-Reyes J. Native mitochondrial RNA-binding complexes in kinetoplastid RNA editing differ in guide RNA composition Rna. 20: 1142-1152. PMID 24865612 DOI: 10.1261/Rna.044495.114 |
0.731 |
|
| 2011 |
Madina BR, Kuppan G, Vashisht AA, Liang YH, Downey KM, Wohlschlegel JA, Ji X, Sze SH, Sacchettini JC, Read LK, Cruz-Reyes J. Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei. Rna (New York, N.Y.). 17: 1821-30. PMID 21810935 DOI: 10.1261/Rna.2815911 |
0.713 |
|
| 2010 |
Reifur L, Yu LE, Cruz-Reyes J, Vanhartesvelt M, Koslowsky DJ. The impact of mRNA structure on guide RNA targeting in kinetoplastid RNA editing. Plos One. 5: e12235. PMID 20808932 DOI: 10.1371/Journal.Pone.0012235 |
0.636 |
|
| 2010 |
Simpson L, Aphasizhev R, Lukes J, Cruz-Reyes J. Guide to the nomenclature of kinetoplastid RNA editing: a proposal. Protist. 161: 2-6. PMID 19945343 DOI: 10.1016/J.Protis.2009.10.001 |
0.601 |
|
| 2010 |
Hernandez A, Madina BR, Ro K, Wohlschlegel JA, Willard B, Kinter MT, Cruz-Reyes J. REH2 RNA helicase in kinetoplastid mitochondria: ribonucleoprotein complexes and essential motifs for unwinding and guide RNA (gRNA) binding. The Journal of Biological Chemistry. 285: 1220-8. PMID 19850921 DOI: 10.1074/Jbc.M109.051862 |
0.755 |
|
| 2008 |
Hernandez A, Panigrahi A, Cifuentes-Rojas C, Sacharidou A, Stuart K, Cruz-Reyes J. Determinants for association and guide RNA-directed endonuclease cleavage by purified RNA editing complexes from Trypanosoma brucei. Journal of Molecular Biology. 381: 35-48. PMID 18572190 DOI: 10.1016/J.Jmb.2008.05.003 |
0.762 |
|
| 2008 |
Alatortsev VS, Cruz-Reyes J, Zhelonkina AG, Sollner-Webb B. Trypanosoma brucei RNA editing: coupled cycles of U deletion reveal processive activity of the editing complex. Molecular and Cellular Biology. 28: 2437-45. PMID 18227152 DOI: 10.1128/Mcb.01886-07 |
0.709 |
|
| 2007 |
Cruz-Reyes J. RNA-protein interactions in assembled editing complexes in trypanosomes. Methods in Enzymology. 424: 107-25. PMID 17662838 DOI: 10.1016/S0076-6879(07)24005-4 |
0.568 |
|
| 2007 |
Cifuentes-Rojas C, Pavia P, Hernandez A, Osterwisch D, Puerta C, Cruz-Reyes J. Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion. The Journal of Biological Chemistry. 282: 4265-76. PMID 17158098 DOI: 10.1074/Jbc.M605554200 |
0.751 |
|
| 2006 |
Halbig K, Sacharidou A, De Nova-Ocampo M, Cruz-Reyes J. Preferential interaction of a 25kDa protein with an A6 pre-mRNA substrate for RNA editing in Trypanosoma brucei. International Journal For Parasitology. 36: 1295-304. PMID 16860325 DOI: 10.1016/J.Ijpara.2006.05.011 |
0.717 |
|
| 2006 |
Miller MM, Halbig K, Cruz-Reyes J, Read LK. RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction. Rna (New York, N.Y.). 12: 1292-303. PMID 16691000 DOI: 10.1261/Rna.2331506 |
0.681 |
|
| 2006 |
Sacharidou A, Cifuentes-Rojas C, Halbig K, Hernandez A, Dangott LJ, De Nova-Ocampo M, Cruz-Reyes J. RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei. Rna (New York, N.Y.). 12: 1219-28. PMID 16690999 DOI: 10.1261/Rna.2295706 |
0.747 |
|
| 2006 |
Zhelonkina AG, O'Hearn SF, Law JA, Cruz-Reyes J, Huang CE, Alatortsev VS, Sollner-Webb B. T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle. Rna (New York, N.Y.). 12: 476-87. PMID 16495238 DOI: 10.1261/Rna.2243206 |
0.521 |
|
| 2005 |
Cifuentes-Rojas C, Halbig K, Sacharidou A, De Nova-Ocampo M, Cruz-Reyes J. Minimal pre-mRNA substrates with natural and converted sites for full-round U insertion and U deletion RNA editing in trypanosomes. Nucleic Acids Research. 33: 6610-20. PMID 16306234 DOI: 10.1093/Nar/Gki943 |
0.686 |
|
| 2004 |
Halbig K, De Nova-Ocampo M, Cruz-Reyes J. Complete cycles of bloodstream trypanosome RNA editing in vitro. Rna (New York, N.Y.). 10: 914-20. PMID 15146075 DOI: 10.1261/Rna.5157704 |
0.663 |
|
| 2002 |
Cruz-Reyes J, Zhelonkina AG, Huang CE, Sollner-Webb B. Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes. Molecular and Cellular Biology. 22: 4652-60. PMID 12052873 DOI: 10.1128/Mcb.22.13.4652-4660.2002 |
0.662 |
|
| 2001 |
Sollner-Webb B, Cruz-Reyes J, Rusché LN. Direct sizing of RNA fragments using RNase-generated standards. Methods in Enzymology. 342: 378-83. PMID 11586910 DOI: 10.1016/S0076-6879(01)42560-2 |
0.621 |
|
| 2001 |
Sollner-Webb B, Rusché LN, Cruz-Reyes J. Ribonuclease activities of trypanosome RNA editing complex directed to cleave specifically at a chosen site. Methods in Enzymology. 341: 154-74. PMID 11582776 DOI: 10.1016/S0076-6879(01)41151-7 |
0.69 |
|
| 2001 |
Huang CE, Cruz-Reyes J, Zhelonkina AG, O'Hearn S, Wirtz E, Sollner-Webb B. Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair. The Embo Journal. 20: 4694-703. PMID 11532934 DOI: 10.1093/Emboj/20.17.4694 |
0.625 |
|
| 2001 |
Cruz-Reyes J, Zhelonkina A, Rusche L, Sollner-Webb B. Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold. Molecular and Cellular Biology. 21: 884-92. PMID 11154275 DOI: 10.1128/Mcb.21.3.884-892.2001 |
0.681 |
|
| 1998 |
Cruz-Reyes J, Rusché LN, Sollner-Webb B. Trypanosoma brucei U insertion and U deletion activities co-purify with an enzymatic editing complex but are differentially optimized. Nucleic Acids Research. 26: 3634-9. PMID 9685476 DOI: 10.1093/Nar/26.16.3634 |
0.654 |
|
| 1998 |
Cruz-Reyes J, Rusché LN, Piller KJ, Sollner-Webb B. T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage. Molecular Cell. 1: 401-9. PMID 9660924 DOI: 10.1016/S1097-2765(00)80040-4 |
0.546 |
|
| 1998 |
Cruz-Reyes J, Piller KJ, Rusché LN, Mukherjee M, Sollner-Webb B. Unexpected electrophoretic migration of RNA with different 3' termini causes a RNA sizing ambiguity that can be resolved using nuclease P1-generated sequencing ladders. Biochemistry. 37: 6059-64. PMID 9558344 DOI: 10.1021/Bi972868G |
0.605 |
|
| 1996 |
Cruz-Reyes J, Sollner-Webb B. Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activities. Proceedings of the National Academy of Sciences of the United States of America. 93: 8901-6. PMID 8799125 DOI: 10.1073/Pnas.93.17.8901 |
0.699 |
|
| 1995 |
Cruz-Reyes J, ur-Rehman T, Spice WM, Ackers JP. A novel transcribed repeat element from Entamoeba histolytica Gene. 166: 183-184. PMID 8529889 DOI: 10.1016/0378-1119(95)00549-X |
0.516 |
|
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