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Feng Gai - Publications

Affiliations: 
Chemistry University of Pennsylvania, Philadelphia, PA, United States 
Area:
Physical and Biological Chemistry
Website:
http://webdev.chem.upenn.edu/chem/research/faculty.php?id=20

174 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang K, Ahmed IA, Kratochvil HT, DeGrado WF, Gai F, Jo H. Synthesis and application of the blue fluorescent amino acid l-4-cyanotryptophan to assess peptide-membrane interactions. Chemical Communications (Cambridge, England). PMID 30957824 DOI: 10.1039/c9cc01152h  0.64
2019 Ahmed IA, Acharyya A, Eng CM, Rodgers JM, DeGrado WF, Jo H, Gai F. 4-Cyanoindole-2'-deoxyribonucleoside as a Dual Fluorescence and Infrared Probe of DNA Structure and Dynamics. Molecules (Basel, Switzerland). 24. PMID 30744004 DOI: 10.3390/molecules24030602  0.64
2019 Acharyya A, Ge Y, Wu H, DeGrado WF, Voelz VA, Gai F. Exposing the Nucleation Site in α-Helix Folding: A Joint Experimental and Simulation Study. The Journal of Physical Chemistry. B. PMID 30694671 DOI: 10.1021/acs.jpcb.8b12220  0.64
2018 Pazos IM, Ma J, Mukherjee D, Gai F. Ultrafast Hydrogen-Bonding Dynamics in Amyloid Fibrils. The Journal of Physical Chemistry. B. PMID 29883122 DOI: 10.1021/acs.jpcb.8b04642  0.72
2018 Dollé JP, Rodgers JM, Browne KD, Troxler T, Gai F, Smith DH. Newfound effect of N-acetylaspartate in preventing and reversing aggregation of amyloid-beta in vitro. Neurobiology of Disease. PMID 29859874 DOI: 10.1016/j.nbd.2018.05.023  0.6
2018 Ding B, Yang L, Mukherjee D, Chen J, Gao YQ, Gai F. Microscopic Insight into the Protein Denaturation Action of Urea and Its Methyl Derivatives. The Journal of Physical Chemistry Letters. PMID 29767523 DOI: 10.1021/acs.jpclett.8b00960  0.88
2018 Tang YD, Wang W, Yang M, Zhang K, Chen J, Qiao S, Yan H, Wu Y, Huang X, Xu B, Gao R, Yang Y. Randomized Comparisons of Double-Dose Clopidogrel or Adjunctive Cilostazol versus Standard Dual Anti-platelet in Patients with High Post-Treatment Platelet Reactivity: Results of the CREATIVE Trial (Clopidogrel Response Evaluation and AnTi-platelet InterVEntion in High Thrombotic Risk PCI Patients). Circulation. PMID 29420189 DOI: 10.1161/CIRCULATIONAHA.117.030190  0.56
2018 Wu H, Acharyya A, Wu Y, Liu L, Jo H, Gai F, DeGrado W. Design of a short thermally stable α-helix embedded in a macrocycle. Chembiochem : a European Journal of Chemical Biology. PMID 29417711 DOI: 10.1002/cbic.201800026  0.56
2018 Mukherjee D, Ortiz Rodriguez LI, Hilaire MR, Troxler T, Gai F. 7-Cyanoindole fluorescence as a local hydration reporter: application to probe the microheterogeneity of nine water-organic binary mixtures. Physical Chemistry Chemical Physics : Pccp. PMID 29313858 DOI: 10.1039/c7cp07160d  0.6
2017 Hilaire MR, Ding B, Mukherjee D, Chen J, Gai F. Possible Existence of α-Sheets in the Amyloid Fibrils Formed by a TTR105-115 Mutant. Journal of the American Chemical Society. PMID 29241000 DOI: 10.1021/jacs.7b09262  0.88
2017 Hilaire MR, Mukherjee D, Troxler T, Gai F. Solvent Dependence of Cyanoindole Fluorescence Lifetime. Chemical Physics Letters. 685: 133-138. PMID 29225366 DOI: 10.1016/j.cplett.2017.07.038  0.6
2017 Abaskharon RM, Brown SP, Zhang W, Chen J, Smith AB, Gai F. Isotope-Labeled Aspartate Sidechain as a Non-Perturbing Infrared Probe: Application to Investigate the Dynamics of a Carboxylate Buried Inside a Protein. Chemical Physics Letters. 683: 193-198. PMID 29033461 DOI: 10.1016/j.cplett.2017.03.064  0.88
2017 Stöhr J, Wu H, Nick M, Wu Y, Bhate M, Condello C, Johnson N, Rodgers J, Lemmin T, Acharya S, Becker J, Robinson K, Kelly MJS, Gai F, Stubbs G, et al. A 31-residue peptide induces aggregation of tau's microtubule-binding region in cells. Nature Chemistry. 9: 874-881. PMID 28837163 DOI: 10.1038/nchem.2754  0.64
2017 Rodgers JM, Abaskharon RM, Ding B, Chen J, Zhang W, Gai F. Fermi resonance as a means to determine the hydrogen-bonding status of two infrared probes. Physical Chemistry Chemical Physics : Pccp. PMID 28604875 DOI: 10.1039/c7cp02442h  0.88
2017 Hilaire MR, Ahmed IA, Lin CW, Jo H, DeGrado WF, Gai F. Blue fluorescent amino acid for biological spectroscopy and microscopy. Proceedings of the National Academy of Sciences of the United States of America. PMID 28533371 DOI: 10.1073/pnas.1705586114  0.64
2017 Lin CW, Mensa B, Barniol-Xicota M, DeGrado WF, Gai F. Activation pH and Gating Dynamics of Influenza A M2 Proton Channel Revealed by Single-Molecule Spectroscopy. Angewandte Chemie (International Ed. in English). PMID 28374543 DOI: 10.1002/anie.201701874  0.64
2017 Lin CW, Gai F. Microscopic nucleation and propagation rates of an alanine-based α-helix. Physical Chemistry Chemical Physics : Pccp. PMID 28165082 DOI: 10.1039/c6cp08924k  0.64
2017 Ding B, Mukherjee D, Chen J, Gai F. Do guanidinium and tetrapropylammonium ions specifically interact with aromatic amino acid side chains? Proceedings of the National Academy of Sciences of the United States of America. PMID 28096375 DOI: 10.1073/pnas.1618071114  0.88
2016 Gai F, Zhang C, Zhan Y, Li X. Enhanced light-harvesting capability for silicon single-nanowire solar cells coupled with metallic cavity. Optics Express. 24: A1505-A1513. PMID 28059281  0.88
2016 Ahmed IA, Gai F. Simple Method to Introduce an Ester Infrared Probe into Proteins. Protein Science : a Publication of the Protein Society. PMID 27813296 DOI: 10.1002/pro.3076  0.44
2016 Markiewicz BN, Lemmin T, Zhang W, Ahmed IA, Jo H, Fiorin G, Troxler T, DeGrado WF, Gai F. Infrared and fluorescence assessment of the hydration status of the tryptophan gate in the influenza A M2 proton channel. Physical Chemistry Chemical Physics : Pccp. PMID 27725984 DOI: 10.1039/c6cp03426h  0.72
2016 Li Z, Li N, Qu Y, Gai F, Zhang G, Zhang G. Application of 3.0T magnetic resonance arterial spin labeling (ASL) technology in mild and moderate intracranial atherosclerotic stenosis. Experimental and Therapeutic Medicine. 12: 297-301. PMID 27347052 DOI: 10.3892/etm.2016.3318  0.56
2016 Mukherjee D, Gai F. Exciton CD Couplet Arising From Nitrile-Derivatized Aromatic Residues as a Structural Probe of Proteins. Analytical Biochemistry. PMID 27251434 DOI: 10.1016/j.ab.2016.05.017  1
2016 Ding B, Hilaire MR, Gai F. Infrared and Fluorescence Assessment of Protein Dynamics: From Folding to Function. The Journal of Physical Chemistry. B. PMID 27183318 DOI: 10.1021/acs.jpcb.6b03199  1
2016 Abaskharon RM, Gai F. Meandering Down the Energy Landscape of Protein Folding: Are We There Yet? Biophysical Journal. 110: 1924-32. PMID 27166801 DOI: 10.1016/j.bpj.2016.03.030  0.6
2016 Abaskharon RM, Gai F. Direct measurement of the tryptophan-mediated photocleavage kinetics of a protein disulfide bond. Physical Chemistry Chemical Physics : Pccp. PMID 26997094 DOI: 10.1039/c6cp00865h  0.6
2016 Rodgers JM, Zhang W, Bazewicz CG, Chen J, Brewer SH, Gai F. Kinetic Isotope Effect Provides Insight into the Vibrational Relaxation Mechanism of Aromatic Molecules: Application to Cyano-phenylalanine. The Journal of Physical Chemistry Letters. PMID 26990401 DOI: 10.1021/acs.jpclett.6b00325  1
2016 Markiewicz BN, Mukherjee D, Troxler T, Gai F. On the Utility of 5-Cyanotryptophan Fluorescence as a Sensitive Probe of Protein Hydration. The Journal of Physical Chemistry. B. PMID 26783936 DOI: 10.1021/acs.jpcb.5b12233  1
2016 Cheng J, Yang G, Zhang K, He G, Jia J, Yu H, Gai F, Li L, Hao C, Zhang F. Guanidimidazole-quanternized and cross-linked alkaline polymer electrolyte membrane for fuel cell application Journal of Membrane Science. 501: 100-108. DOI: 10.1016/j.memsci.2015.12.012  0.64
2015 Gai F, Zhou T, Chu G, Li Y, Liu Y, Huo Q, Akhtar F. Mixed anionic surfactant-templated mesoporous silica nanoparticles for fluorescence detection of Fe(3.) Dalton Transactions (Cambridge, England : 2003). PMID 26616310 DOI: 10.1039/c5dt03052h  0.72
2015 Oh KI, Fiorin G, Gai F. How Sensitive is the Amide I Vibration of the Polypeptide Backbone to Electric Fields? Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 26419214 DOI: 10.1002/cphc.201500777  1
2015 Zhang W, Markiewicz BN, Doerksen RS, Smith Iii AB, Gai F. C[triple bond, length as m-dash]N stretching vibration of 5-cyanotryptophan as an infrared probe of protein local environment: what determines its frequency? Physical Chemistry Chemical Physics : Pccp. PMID 26343769 DOI: 10.1039/c5cp04413h  1
2015 Hilaire MR, Abaskharon RM, Gai F. Biomolecular Crowding Arising from Small Molecules, Molecular Constraints, Surface Packing, and Nano-Confinement. The Journal of Physical Chemistry Letters. 6: 2546-53. PMID 26266732 DOI: 10.1021/acs.jpclett.5b00957  1
2015 Abaskharon RM, Culik RM, Woolley GA, Gai F. Tuning the Attempt Frequency of Protein Folding Dynamics via Transition-State Rigidification: Application to Trp-cage. The Journal of Physical Chemistry Letters. 6: 521-526. PMID 26120378 DOI: 10.1021/jz502654q  1
2015 Zhang L, Li Z, Gai F, Wang Y. MicroRNA‑137 suppresses tumor growth in epithelial ovarian cancer in vitro and in vivo. Molecular Medicine Reports. 12: 3107-14. PMID 25955305 DOI: 10.3892/mmr.2015.3756  0.56
2015 Pazos IM, Ahmed IA, Berríos MI, Gai F. Sensing pH via p-cyanophenylalanine fluorescence: Application to determine peptide pKa and membrane penetration kinetics. Analytical Biochemistry. 483: 21-6. PMID 25935260 DOI: 10.1016/j.ab.2015.04.026  1
2015 Chu G, Wang X, Chen T, Gao J, Gai F, Wang Y, Xu Y. Optically Tunable Chiral Plasmonic Guest-Host Cellulose Films Weaved with Long-range Ordered Silver Nanowires. Acs Applied Materials & Interfaces. 7: 11863-70. PMID 25839237 DOI: 10.1021/acsami.5b01478  0.52
2015 Oh KI, Smith-Dupont KB, Markiewicz BN, Gai F. Kinetics of Peptide Folding in Lipid Membranes. Biopolymers. PMID 25808575 DOI: 10.1002/bip.22640  0.68
2015 Chuntonov L, Pazos IM, Ma J, Gai F. Kinetics of exchange between zero-, one-, and two-hydrogen-bonded states of methyl and ethyl acetate in methanol. The Journal of Physical Chemistry. B. 119: 4512-20. PMID 25738661 DOI: 10.1021/acs.jpcb.5b00745  1
2015 Mintzer MR, Troxler T, Gai F. p-Cyanophenylalanine and selenomethionine constitute a useful fluorophore-quencher pair for short distance measurements: application to polyproline peptides. Physical Chemistry Chemical Physics : Pccp. 17: 7881-7. PMID 25716887 DOI: 10.1039/c5cp00050e  1
2015 Ma J, Pazos IM, Zhang W, Culik RM, Gai F. Site-specific infrared probes of proteins. Annual Review of Physical Chemistry. 66: 357-77. PMID 25580624 DOI: 10.1146/annurev-physchem-040214-121802  1
2015 Gai FF, Cai Y, Hao JC, Qiao M. Tests and modeling for damage of pressure vessels' rear wall caused by hypervelocity impact Zhendong Yu Chongji/Journal of Vibration and Shock. 34: 12-17. DOI: 10.13465/j.cnki.jvs.2015.13.003  0.68
2015 Chen J, Chen S, Gai F, Jiang H. Experimental analysis of electron beam extracting from a device with hollow-anode vacuum-arc-plasma cathode Gaodianya Jishu/High Voltage Engineering. 41: 560-564. DOI: 10.13336/j.1003-6520.hve.2015.02.031  0.88
2015 Li X, Gai F, Guan B, Zhang Y, Liu Y, Huo Q. Fe@C core-shell and Fe@C yolk-shell particles for effective removal of 4-chlorophenol Journal of Materials Chemistry A. 3: 3988-3994. DOI: 10.1039/c4ta05915h  0.72
2015 Gai F, Zhou T, Liu Y, Huo Q. Surface charge tuning of functionalized silica cross-linked micellar nanoparticles encapsulating a donor-acceptor dye for Fe(III) sensing Journal of Materials Chemistry A. 3: 2120-2127. DOI: 10.1039/c4ta05555a  0.72
2014 Markiewicz BN, Culik RM, Gai F. Tightening up the structure, lighting up the pathway: Application of molecular constraints and light to manipulate protein folding, self-assembly and function. Science China. Chemistry. 57: 1615-1624. PMID 25722715 DOI: 10.1007/s11426-014-5225-5  1
2014 Culik RM, Abaskharon RM, Pazos IM, Gai F. Experimental validation of the role of trifluoroethanol as a nanocrowder. The Journal of Physical Chemistry. B. 118: 11455-61. PMID 25215518 DOI: 10.1021/jp508056w  1
2014 Ghosh A, Wang J, Moroz YS, Korendovych IV, Zanni M, DeGrado WF, Gai F, Hochstrasser RM. 2D IR spectroscopy reveals the role of water in the binding of channel-blocking drugs to the influenza M2 channel. The Journal of Chemical Physics. 140: 235105. PMID 24952572 DOI: 10.1063/1.4881188  1
2014 Ma J, Pazos IM, Gai F. Microscopic insights into the protein-stabilizing effect of trimethylamine N-oxide (TMAO). Proceedings of the National Academy of Sciences of the United States of America. 111: 8476-81. PMID 24912147 DOI: 10.1073/pnas.1403224111  1
2014 Pazos IM, Ghosh A, Tucker MJ, Gai F. Ester carbonyl vibration as a sensitive probe of protein local electric field. Angewandte Chemie (International Ed. in English). 53: 6080-4. PMID 24788907 DOI: 10.1002/anie.201402011  1
2014 Ghosh A, Tucker MJ, Gai F. 2D IR spectroscopy of histidine: probing side-chain structure and dynamics via backbone amide vibrations. The Journal of Physical Chemistry. B. 118: 7799-805. PMID 24712671 DOI: 10.1021/jp411901m  1
2014 Markiewicz BN, Yang L, Culik RM, Gao YQ, Gai F. How quickly can a β-hairpin fold from its transition state? The Journal of Physical Chemistry. B. 118: 3317-25. PMID 24611730 DOI: 10.1021/jp500774q  1
2014 Markiewicz BN, Oyola R, Du D, Gai F. Aggregation gatekeeper and controlled assembly of Trpzip β-hairpins. Biochemistry. 53: 1146-54. PMID 24498924 DOI: 10.1021/bi401568a  1
2014 Montalvo GL, Gai F, Roder H, DeGrado WF. Slow folding-unfolding kinetics of an octameric β-peptide bundle. Acs Chemical Biology. 9: 276-81. PMID 24164344 DOI: 10.1021/cb400621y  1
2014 Tian W, Chen Sx, Xiao Jx, Gai F, Chen K. Judgment criterion of Cherenkov radiation by an accelerated electron bunch in poloidal magnetized plasma Applied Mathematics and Information Sciences. 8: 1419-1423. DOI: 10.12785/amis/080359  0.88
2014 Jiang H, Gai F, Chen S, Li X, Chen J, Tian W. Experimental study of electron gun with hollow-anode vacuum-arc-plasma cathode Ieee Transactions On Electron Devices. 61: 1895-1899. DOI: 10.1109/TED.2014.2304531  0.88
2014 Gai F, Li X, Zhou T, Zhao X, Lu D, Liu Y, Huo Q. Silica cross-linked nanoparticles encapsulating a phenothiazine-derived Schiff base for selective detection of Fe(III) in aqueous media Journal of Materials Chemistry B. 2: 6306-6312. DOI: 10.1039/c4tb00805g  0.72
2013 Culik RM, Annavarapu S, Nanda V, Gai F. Using D-Amino Acids to Delineate the Mechanism of Protein Folding: Application to Trp-cage. Chemical Physics. 422. PMID 24307748 DOI: 10.1016/j.chemphys.2013.01.021  1
2013 Zhu C, Dai Z, Liang H, Zhang T, Gai F, Lai L. Slow and bimolecular folding of a de novo designed monomeric protein DS119. Biophysical Journal. 105: 2141-8. PMID 24209859 DOI: 10.1016/j.bpj.2013.09.014  1
2013 Markiewicz BN, Jo H, Culik RM, DeGrado WF, Gai F. Assessment of local friction in protein folding dynamics using a helix cross-linker. The Journal of Physical Chemistry. B. 117: 14688-96. PMID 24205975 DOI: 10.1021/jp409334h  1
2013 Measey TJ, Markiewicz BN, Gai F. Amide I Band and Photoinduced Disassembly of a Peptide Hydrogel. Chemical Physics Letters. 580: 135-140. PMID 23997272 DOI: 10.1016/j.cplett.2013.06.055  1
2013 Pazos IM, Roesch RM, Gai F. Quenching of p-Cyanophenylalanine Fluorescence by Various Anions. Chemical Physics Letters. 563: 93-96. PMID 23645934 DOI: 10.1016/j.cplett.2013.02.015  1
2013 Lin CW, Culik RM, Gai F. Using VIPT-jump to distinguish between different folding mechanisms: application to BBL and a Trpzip. Journal of the American Chemical Society. 135: 7668-73. PMID 23642153 DOI: 10.1021/ja401473m  1
2013 Guo L, Gai F. Simple method to enhance the photostability of the fluorescence reporter R6G for prolonged single-molecule studies. The Journal of Physical Chemistry. A. 117: 6164-70. PMID 23641719 DOI: 10.1021/jp4003643  1
2013 Gai F, Chen S, Jiang H, Tian W, Chen J, Li X. Analysis of conduction characteristics of field-breakdown triggered vacuum switches Ieee Transactions On Plasma Science. 41: 2160-2165. DOI: 10.1109/TPS.2013.2260833  0.88
2013 Chen J, Zheng Y, Zhang L, Wang M, Gai F, Li C, Shen Y. The design and implementation of the kernel level mobile storage medium data protection system Proceedings - 2013 Ieee International Conference On Granular Computing, Grc 2013. 53-57. DOI: 10.1109/GrC.2013.6740380  0.44
2013 Tian W, Chen SX, Xiao JX, Gai F, Chen K. Dispersion of cherenkov radiation by electron uniform moving in poloidal magnetized plasma Sensors and Transducers. 158: 274-278.  0.88
2012 Chow D, Guo L, Gai F, Goulian M. Fluorescence correlation spectroscopy measurements of the membrane protein TetA in Escherichia coli suggest rapid diffusion at short length scales. Plos One. 7: e48600. PMID 23119068 DOI: 10.1371/journal.pone.0048600  1
2012 Pazos IM, Gai F. Solute's perspective on how trimethylamine oxide, urea, and guanidine hydrochloride affect water's hydrogen bonding ability. The Journal of Physical Chemistry. B. 116: 12473-8. PMID 22998405 DOI: 10.1021/jp307414s  1
2012 Gai F, Zhou T, Zhang L, Li X, Hou W, Yang X, Li Y, Zhao X, Xu D, Liu Y, Huo Q. Silica cross-linked nanoparticles encapsulating fluorescent conjugated dyes for energy transfer-based white light emission and porphyrin sensing. Nanoscale. 4: 6041-9. PMID 22930394 DOI: 10.1039/c2nr31194a  0.72
2012 Serrano AL, Bilsel O, Gai F. Native state conformational heterogeneity of HP35 revealed by time-resolved FRET. The Journal of Physical Chemistry. B. 116: 10631-8. PMID 22891809 DOI: 10.1021/jp211296e  1
2012 Measey TJ, Gai F. Light-triggered disassembly of amyloid fibrils. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 12588-92. PMID 22867440 DOI: 10.1021/la302626d  1
2012 Li Y, Zhang D, Gai F, Zhu X, Guo YN, Ma T, Liu Y, Huo Q. Ionic self-assembly of surface functionalized metal-organic polyhedra nanocages and their ordered honeycomb architecture at the air/water interface. Chemical Communications (Cambridge, England). 48: 7946-8. PMID 22760593 DOI: 10.1039/c2cc33343k  0.72
2012 Culik RM, Jo H, DeGrado WF, Gai F. Using thioamides to site-specifically interrogate the dynamics of hydrogen bond formation in β-sheet folding. Journal of the American Chemical Society. 134: 8026-9. PMID 22540162 DOI: 10.1021/ja301681v  1
2012 Wang YH, Collins A, Guo L, Smith-Dupont KB, Gai F, Svitkina T, Janmey PA. Divalent cation-induced cluster formation by polyphosphoinositides in model membranes. Journal of the American Chemical Society. 134: 3387-95. PMID 22280226 DOI: 10.1021/ja208640t  1
2012 Serrano AL, Waegele MM, Gai F. Spectroscopic studies of protein folding: linear and nonlinear methods. Protein Science : a Publication of the Protein Society. 21: 157-70. PMID 22109973 DOI: 10.1002/pro.2006  1
2012 Gai F, Cai A, Zhang D, Sun L. Analysis on influence of effective turbulence intensity on blade root fatigue load of WTGS Advanced Materials Research. 538: 605-609. DOI: 10.4028/www.scientific.net/AMR.538-541.605  0.72
2012 Gai F, Chen S, Chen K, Li J, Tian W, Xiao J. Conduction characteristics of long-gap triggered vacuum switch Qiangjiguang Yu Lizishu/High Power Laser and Particle Beams. 24: 847-850. DOI: 10.3788/HPLPB20122404.0847  0.88
2012 Xu L, Gai F, Mu G, Gao Y, Liu H, Luan F. Determination of formaldehyde in aquatic products by micellar electrokinetic capillary chromatography with 2,4-dinitrophenylhydrazine derivatization Acta Chromatographica. 24: 519-528. DOI: 10.1556/AChrom.24.2012.4.1  0.44
2012 Gai FF, Pang BJ, Guan GS. Model for the deceleration of secondary debris produced by hypervelocity impact on pressure vessels Gaoya Wuli Xuebao/Chinese Journal of High Pressure Physics. 26: 177-184.  0.68
2011 Waegele MM, Culik RM, Gai F. Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules. The Journal of Physical Chemistry Letters. 2: 2598-2609. PMID 22003429 DOI: 10.1021/jz201161b  1
2011 Culik RM, Serrano AL, Bunagan MR, Gai F. Achieving secondary structural resolution in kinetic measurements of protein folding: a case study of the folding mechanism of Trp-cage. Angewandte Chemie (International Ed. in English). 50: 10884-7. PMID 21956888 DOI: 10.1002/anie.201104085  1
2011 Shandler SJ, Korendovych IV, Moore DT, Smith-Dupont KB, Streu CN, Litvinov RI, Billings PC, Gai F, Bennett JS, DeGrado WF. Computational design of a β-peptide that targets transmembrane helices. Journal of the American Chemical Society. 133: 12378-81. PMID 21780757 DOI: 10.1021/ja204215f  1
2011 Serrano AL, Tucker MJ, Gai F. Direct assessment of the α-helix nucleation time. The Journal of Physical Chemistry. B. 115: 7472-8. PMID 21568273 DOI: 10.1021/jp200628b  1
2011 Rogers JM, Polishchuk AL, Guo L, Wang J, DeGrado WF, Gai F. Photoinduced electron transfer and fluorophore motion as a probe of the conformational dynamics of membrane proteins: application to the influenza a M2 proton channel. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 3815-21. PMID 21401044 DOI: 10.1021/la200480d  1
2011 Waegele MM, Gai F. Power-law dependence of the melting temperature of ubiquitin on the volume fraction of macromolecular crowders. The Journal of Chemical Physics. 134: 095104. PMID 21385002 DOI: 10.1063/1.3556671  1
2011 Guo L, Smith-Dupont KB, Gai F. Diffusion as a probe of peptide-induced membrane domain formation. Biochemistry. 50: 2291-7. PMID 21332237 DOI: 10.1021/bi102068j  1
2011 Donald JE, Zhang Y, Fiorin G, Carnevale V, Slochower DR, Gai F, Klein ML, DeGrado WF. Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion. Proceedings of the National Academy of Sciences of the United States of America. 108: 3958-63. PMID 21321234 DOI: 10.1073/pnas.1019668108  1
2011 Wang CL, Yin CL, Luo G, Guo ZQ, Gai FX. Start and acceleration optimization of a parallel hybrid electric vehicle Proceedings of the Institution of Mechanical Engineers, Part D: Journal of Automobile Engineering. 225: 591-607. DOI: 10.1177/0954407010396007  0.64
2011 Peiretti PG, Gasco L, Brugiapaglia A, Gai F. Effects of perilla (Perilla frutescens L.) seeds supplementation on performance, carcass characteristics, meat quality and fatty acid composition of rabbits Livestock Science. 138: 118-124. DOI: 10.1016/j.livsci.2010.12.007  0.2
2011 Gai F, Du J, Zhong T. Classification and its application of regenerative braking for hybrid electric vehicle Qiche Gongcheng/Automotive Engineering. 33: 222-225+230.  0.64
2011 Gai FF, Pang BJ, Guan GS. Quasi-static bursting analysis of gas-filled pressure vessels on the front side under hypervelocity impact Gaoya Wuli Xuebao/Chinese Journal of High Pressure Physics. 25: 48-54.  0.68
2011 Li MY, Yuan W, Li ZP, Gai F, Lu YJ. Experimental investigation of airfoil-wake interaction of wind turbines using PIV Hangkong Dongli Xuebao/Journal of Aerospace Power. 26: 281-288.  0.52
2010 Urbanek DC, Vorobyev DY, Serrano AL, Gai F, Hochstrasser RM. The Two Dimensional Vibrational Echo of a Nitrile Probe of the Villin HP35 Protein. The Journal of Physical Chemistry Letters. 1: 3311-3315. PMID 21132120 DOI: 10.1021/jz101367d  1
2010 Jo H, Culik RM, Korendovych IV, Degrado WF, Gai F. Selective incorporation of nitrile-based infrared probes into proteins via cysteine alkylation. Biochemistry. 49: 10354-6. PMID 21077670 DOI: 10.1021/bi101711a  1
2010 Waegele MM, Gai F. Infrared study of the folding mechanism of a helical hairpin: porcine PYY. Biochemistry. 49: 7659-64. PMID 20666415 DOI: 10.1021/bi100851c  1
2010 Guo L, Gai F. Heterogeneous diffusion of a membrane-bound pHLIP peptide. Biophysical Journal. 98: 2914-22. PMID 20550904 DOI: 10.1016/j.bpj.2010.03.050  1
2010 Smith-Dupont KB, Guo L, Gai F. Diffusion as a probe of the heterogeneity of antimicrobial peptide-membrane interactions. Biochemistry. 49: 4672-8. PMID 20455545 DOI: 10.1021/bi100426p  1
2010 Waegele MM, Gai F. Computational Modeling of the Nitrile Stretching Vibration of 5-Cyanoindole in Water. The Journal of Physical Chemistry Letters. 1: 781-786. PMID 20436926 DOI: 10.1021/jz900429z  1
2010 Serrano AL, Troxler T, Tucker MJ, Gai F. Photophysics of a Fluorescent Non-natural Amino Acid: p-Cyanophenylalanine. Chemical Physics Letters. 487: 303-306. PMID 20419080 DOI: 10.1016/j.cplett.2010.01.058  1
2010 Montalvo G, Waegele MM, Shandler S, Gai F, DeGrado WF. Infrared signature and folding dynamics of a helical beta-peptide. Journal of the American Chemical Society. 132: 5616-8. PMID 20373737 DOI: 10.1021/ja100459a  1
2010 Yang X, Lu R, Gai F, Xue P, Zhan Y. Rigid dendritic gelators based on oligocarbazoles. Chemical Communications (Cambridge, England). 46: 1088-90. PMID 20126722 DOI: 10.1039/b918986f  0.72
2010 Rogers JM, Lippert LG, Gai F. Non-natural amino acid fluorophores for one- and two-step fluorescence resonance energy transfer applications. Analytical Biochemistry. 399: 182-9. PMID 20036210 DOI: 10.1016/j.ab.2009.12.027  1
2010 Callens N, Ventura-Traveset J, Zornoza García-Andrade E, ?omez-Calero C, Van Loon JJWA, Pletser V, Kufner E, Krause J, Lindner R, Gai F, Eigenbrod C. ESA parabolic flight, drop tower and centrifuge hands-on activities 61st International Astronautical Congress 2010, Iac 2010. 3: 2325-2332.  0.04
2010 Pang B, Gai F, Guan G. Numerical simulation on the damage of front side of gas-filled pressure vessels due to hypervelocity impact Zhongguo Kongjian Kexue Jishu/Chinese Space Science and Technology. 30: 76-82.  0.68
2009 Waegele MM, Tucker MJ, Gai F. 5-Cyanotryptophan as an Infrared Probe of Local Hydration Status of Proteins. Chemical Physics Letters. 478: 249-253. PMID 20161057 DOI: 10.1016/j.cplett.2009.07.058  1
2009 Levental I, Byfield FJ, Chowdhury P, Gai F, Baumgart T, Janmey PA. Cholesterol-dependent phase separation in cell-derived giant plasma-membrane vesicles. The Biochemical Journal. 424: 163-7. PMID 19811449 DOI: 10.1042/BJ20091283  1
2009 Mukherjee S, Waegele MM, Chowdhury P, Guo L, Gai F. Effect of macromolecular crowding on protein folding dynamics at the secondary structure level. Journal of Molecular Biology. 393: 227-36. PMID 19682997 DOI: 10.1016/j.jmb.2009.08.016  1
2009 Bunagan MR, Gao J, Kelly JW, Gai F. Probing the folding transition state structure of the villin headpiece subdomain via side chain and backbone mutagenesis. Journal of the American Chemical Society. 131: 7470-6. PMID 19425552 DOI: 10.1021/ja901860f  1
2009 Tang J, Kang SG, Saven JG, Gai F. Characterization of the cofactor-induced folding mechanism of a zinc-binding peptide using computationally designed mutants. Journal of Molecular Biology. 389: 90-102. PMID 19361525 DOI: 10.1016/j.jmb.2009.03.074  1
2009 Guo L, Park J, Lee T, Chowdhury P, Lim M, Gai F. Probing the role of hydration in the unfolding transitions of carbonmonoxy myoglobin and apomyoglobin. The Journal of Physical Chemistry. B. 113: 6158-63. PMID 19348439 DOI: 10.1021/jp900009x  1
2009 Tang J, Yin H, Qiu J, Tucker MJ, DeGrado WF, Gai F. Using two fluorescent probes to dissect the binding, insertion, and dimerization kinetics of a model membrane peptide. Journal of the American Chemical Society. 131: 3816-7. PMID 19256494 DOI: 10.1021/ja809007f  1
2009 Liu F, Dumont C, Zhu Y, DeGrado WF, Gai F, Gruebele M. A one-dimensional free energy surface does not account for two-probe folding kinetics of protein alpha(3)D. The Journal of Chemical Physics. 130: 061101. PMID 19222256 DOI: 10.1063/1.3077008  1
2009 Mukherjee S, Chowdhury P, Gai F. Effect of dehydration on the aggregation kinetics of two amyloid peptides. The Journal of Physical Chemistry. B. 113: 531-5. PMID 19132862 DOI: 10.1021/jp809817s  1
2009 Guan G, Gai F, Chi R. Investigation into damage of Al-foam stuffed whipple shield under hypervelocity projectiles impact 60th International Astronautical Congress 2009, Iac 2009. 3: 1936-1946.  0.68
2009 Gai FF, Pang BJ, Guan GS. Numerical simulation of debris cloud propagation inside gas-filled pressure vessels under hypervelocity impact European Space Agency, (Special Publication) Esa Sp. 672.  0.68
2009 Gai FF, Pang BJ, Guan GS. Numerical investigation on the characteristics of debris clouds produced by hypervelocity impact on pressure vessels Gaoya Wuli Xuebao/Chinese Journal of High Pressure Physics. 23: 223-228.  0.68
2008 Guo L, Chowdhury P, Glasscock JM, Gai F. Denaturant-induced expansion and compaction of a multi-domain protein: IgG. Journal of Molecular Biology. 384: 1029-36. PMID 19004457 DOI: 10.1016/j.jmb.2008.03.006  1
2008 Glasscock JM, Zhu Y, Chowdhury P, Tang J, Gai F. Using an amino acid fluorescence resonance energy transfer pair to probe protein unfolding: application to the villin headpiece subdomain and the LysM domain. Biochemistry. 47: 11070-6. PMID 18816063 DOI: 10.1021/bi8012406  1
2008 Tang J, Gai F. Dissecting the membrane binding and insertion kinetics of a pHLIP peptide. Biochemistry. 47: 8250-2. PMID 18636715 DOI: 10.1021/bi801103x  1
2008 Mukherjee S, Chowdhury P, Bunagan MR, Gai F. Folding kinetics of a naturally occurring helical peptide: implication of the folding speed limit of helical proteins. The Journal of Physical Chemistry. B. 112: 9146-50. PMID 18610960 DOI: 10.1021/jp801721p  1
2008 Xu Y, Bunagan MR, Tang J, Gai F. Probing the kinetic cooperativity of beta-sheet folding perpendicular to the strand direction. Biochemistry. 47: 2064-70. PMID 18197708 DOI: 10.1021/bi702195c  1
2007 Guo L, Chowdhury P, Fang J, Gai F. Heterogeneous and anomalous diffusion inside lipid tubules. The Journal of Physical Chemistry. B. 111: 14244-9. PMID 18052149 DOI: 10.1021/jp076562n  1
2007 Tang J, Signarvic RS, DeGrado WF, Gai F. Role of helix nucleation in the kinetics of binding of mastoparan X to phospholipid bilayers. Biochemistry. 46: 13856-63. PMID 17994771 DOI: 10.1021/bi7018404  1
2007 Mukherjee S, Chowdhury P, DeGrado WF, Gai F. Site-specific hydration status of an amphipathic peptide in AOT reverse micelles. Langmuir : the Acs Journal of Surfaces and Colloids. 23: 11174-9. PMID 17910485 DOI: 10.1021/la701686g  1
2007 Du D, Bunagan MR, Gai F. The effect of charge-charge interactions on the kinetics of alpha-helix formation. Biophysical Journal. 93: 4076-82. PMID 17704172 DOI: 10.1529/biophysj.107.108548  1
2007 Wang T, Zhou Z, Bunagan MR, Du D, Bai Y, Gai F. Probing the folding intermediate of Rd-apocyt b562 by protein engineering and infrared T-jump. Protein Science : a Publication of the Protein Society. 16: 1176-83. PMID 17473017 DOI: 10.1110/ps.062505607  1
2007 Chowdhury P, Wang W, Lavender S, Bunagan MR, Klemke JW, Tang J, Saven JG, Cooperman BS, Gai F. Fluorescence correlation spectroscopic study of serpin depolymerization by computationally designed peptides. Journal of Molecular Biology. 369: 462-73. PMID 17442346 DOI: 10.1016/j.jmb.2007.03.042  1
2007 Mukherjee S, Chowdhury P, Gai F. Infrared study of the effect of hydration on the amide I band and aggregation properties of helical peptides. The Journal of Physical Chemistry. B. 111: 4596-602. PMID 17419612 DOI: 10.1021/jp0689060  1
2007 Gai F, Du D, Xu Y. Infrared temperature-jump study of the folding dynamics of alpha-helices and beta-hairpins. Methods in Molecular Biology (Clifton, N.J.). 350: 1-20. PMID 16957314  1
2007 Jia B, Gai FF, Ma ZT, Pang BJ. Ballistic limit analysis of aluminum 5A06 single wall plate subjected to hypervelocity impact Cailiao Kexue Yu Gongyi/Material Science and Technology. 15: 636-639.  0.68
2007 Duan ZP, Zhang JL, Huang ZP, Gai F. New and reconfigurable data storage instrument for pressure measurement Beijing Ligong Daxue Xuebao/Transaction of Beijing Institute of Technology. 27: 769-773.  0.72
2007 Guan GS, Pang BJ, Ha Y, Gai FF, Zhang W. Damage of Al-Whipple shield rear wall caused by hypervelocity impact of Al-spheres Binggong Xuebao/Acta Armamentarii. 28: 94-100.  0.68
2006 Tang J, Gai F. A millisecond infrared stopped-flow apparatus. Applied Spectroscopy. 60: 1477-81. PMID 17217599 DOI: 10.1366/000370206779321328  1
2006 Xu Y, Purkayastha P, Gai F. Nanosecond folding dynamics of a three-stranded beta-sheet. Journal of the American Chemical Society. 128: 15836-42. PMID 17147395 DOI: 10.1021/ja064865+  1
2006 Du D, Gai F. Understanding the folding mechanism of an alpha-helical hairpin. Biochemistry. 45: 13131-9. PMID 17073435 DOI: 10.1021/bi0615745  1
2006 Bunagan MR, Cristian L, DeGrado WF, Gai F. Truncation of a cross-linked GCN4-p1 coiled coil leads to ultrafast folding. Biochemistry. 45: 10981-6. PMID 16953584 DOI: 10.1021/bi0606142  1
2006 Tucker MJ, Oyola R, Gai F. A novel fluorescent probe for protein binding and folding studies: p-cyano-phenylalanine. Biopolymers. 83: 571-6. PMID 16917881 DOI: 10.1002/bip.20587  1
2006 Mukherjee S, Chowdhury P, Gai F. Tuning the cooperativity of the helix-coil transition by aqueous reverse micelles. The Journal of Physical Chemistry. B. 110: 11615-9. PMID 16800453 DOI: 10.1021/jp062362k  1
2006 Tucker MJ, Tang J, Gai F. Probing the kinetics of membrane-mediated helix folding. The Journal of Physical Chemistry. B. 110: 8105-9. PMID 16610913 DOI: 10.1021/jp060900n  1
2006 Park S, Xu Y, Stowell XF, Gai F, Saven JG, Boder ET. Limitations of yeast surface display in engineering proteins of high thermostability. Protein Engineering, Design & Selection : Peds. 19: 211-7. PMID 16537642 DOI: 10.1093/protein/gzl003  1
2006 Bunagan MR, Yang X, Saven JG, Gai F. Ultrafast folding of a computationally designed Trp-cage mutant: Trp2-cage. The Journal of Physical Chemistry. B. 110: 3759-63. PMID 16494434 DOI: 10.1021/jp055288z  1
2006 Du D, Tucker MJ, Gai F. Understanding the mechanism of beta-hairpin folding via phi-value analysis. Biochemistry. 45: 2668-78. PMID 16489760 DOI: 10.1021/bi052039s  1
2006 Xu Y, Wang T, Gai F. Strange temperature dependence of the folding rate of a 16-residue β-hairpin Chemical Physics. 323: 21-27. DOI: 10.1016/j.chemphys.2005.08.034  1
2005 Tucker MJ, Oyola R, Gai F. Conformational distribution of a 14-residue peptide in solution: a fluorescence resonance energy transfer study. The Journal of Physical Chemistry. B. 109: 4788-95. PMID 16851563 DOI: 10.1021/jp044347q  1
2005 Wang T, Lau WL, DeGrado WF, Gai F. T-jump infrared study of the folding mechanism of coiled-coil GCN4-p1. Biophysical Journal. 89: 4180-7. PMID 16150962 DOI: 10.1529/biophysj.105.068809  1
2005 Purkayastha P, Klemke JW, Lavender S, Oyola R, Cooperman BS, Gai F. Alpha 1-antitrypsin polymerization: a fluorescence correlation spectroscopic study. Biochemistry. 44: 2642-9. PMID 15709777 DOI: 10.1021/bi048662e  1
2005 Zhu Y, Wang T, Gai F, Chan SI, Huang JJT, Larsen RW, Rock RS, Hansen KC, Chaulk SG, Kent OA, MacMillan AM, Monroe WT, Haselton FR, Cambridge SB. New Challenges Dynamic Studies in Biology: Phototriggers, Photoswitches and Caged Biomolecules. 461-538. DOI: 10.1002/3527605592.ch9  1
2004 Wang T, Zhu Y, Getahun Z, Du D, Huang CY, Degrado WF, Gai F. Length Dependent Helix-Coil Transition Kinetics of Nine Alanine-Based Peptides. The Journal of Physical Chemistry. B. 108. PMID 24307864 DOI: 10.1021/jp037272j  1
2004 Du D, Zhu Y, Huang CY, Gai F. Understanding the key factors that control the rate of beta-hairpin folding. Proceedings of the National Academy of Sciences of the United States of America. 101: 15915-20. PMID 15520391 DOI: 10.1073/pnas.0405904101  1
2004 Wang T, Xu Y, Du D, Gai F. Determining beta-sheet stability by Fourier transform infrared difference spectra. Biopolymers. 75: 163-72. PMID 15356870 DOI: 10.1002/bip.20101  1
2004 Tucker MJ, Getahun Z, Nanda V, DeGrado WF, Gai F. A new method for determining the local environment and orientation of individual side chains of membrane-binding peptides. Journal of the American Chemical Society. 126: 5078-9. PMID 15099085 DOI: 10.1021/ja032015d  1
2004 Snow CD, Qiu L, Du D, Gai F, Hagen SJ, Pande VS. Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 101: 4077-82. PMID 15020773 DOI: 10.1073/pnas.0305260101  1
2004 Zhu Y, Fu X, Wang T, Tamura A, Takada S, Saven JG, Gai F. Guiding the search for a protein's maximum rate of folding Chemical Physics. 307: 99-109. DOI: 10.1016/j.chemphys.2004.05.008  1
2004 Wang T, Zhu Y, Gai F. Folding of A Three-Helix Bundle at the Folding Speed Limit Journal of Physical Chemistry B. 108: 3694-3697.  1
2003 Zhu Y, Alonso DO, Maki K, Huang CY, Lahr SJ, Daggett V, Roder H, DeGrado WF, Gai F. Ultrafast folding of alpha3D: a de novo designed three-helix bundle protein. Proceedings of the National Academy of Sciences of the United States of America. 100: 15486-91. PMID 14671331 DOI: 10.1073/pnas.2136623100  1
2003 Xu Y, Oyola R, Gai F. Infrared study of the stability and folding kinetics of a 15-residue beta-hairpin. Journal of the American Chemical Society. 125: 15388-94. PMID 14664583 DOI: 10.1021/ja037053b  1
2003 Getahun Z, Huang CY, Wang T, De León B, DeGrado WF, Gai F. Using nitrile-derivatized amino acids as infrared probes of local environment. Journal of the American Chemical Society. 125: 405-11. PMID 12517152 DOI: 10.1021/ja0285262  1
2003 Huang CY, Wang T, Gai F. Temperature dependence of the CN stretching vibration of a nitrile-derivatized phenylalanine in water Chemical Physics Letters. 371: 731-738. DOI: 10.1016/S0009-2614(03)00353-1  1
2003 Wang T, Du D, Gai F. Helix-coil kinetics of two 14-residue peptides Chemical Physics Letters. 370: 842-848. DOI: 10.1016/S0009-2614(03)00223-9  1
2002 Huang CY, He S, DeGrado WF, McCafferty DG, Gai F. Light-induced helix formation. Journal of the American Chemical Society. 124: 12674-5. PMID 12392410 DOI: 10.1021/ja028084u  1
2002 Huang CY, Getahun Z, Zhu Y, Klemke JW, DeGrado WF, Gai F. Helix formation via conformation diffusion search. Proceedings of the National Academy of Sciences of the United States of America. 99: 2788-93. PMID 11867741 DOI: 10.1073/pnas.052700099  1
2001 Huang CY, Getahun Z, Wang T, DeGrado WF, Gai F. Time-resolved infrared study of the helix-coil transition using (13)C-labeled helical peptides. Journal of the American Chemical Society. 123: 12111-2. PMID 11724630 DOI: 10.1021/ja016631q  1
2001 Huang CY, Klemke JW, Getahun Z, DeGrado WF, Gai F. Temperature-dependent helix-coil transition of an alanine based peptide. Journal of the American Chemical Society. 123: 9235-8. PMID 11562202 DOI: 10.1021/ja0158814  1
2000 Leeson DT, Gai F, Rodriguez HM, Gregoret LM, Dyer RB. Protein folding and unfolding on a complex energy landscape. Proceedings of the National Academy of Sciences of the United States of America. 97: 2527-32. PMID 10681466 DOI: 10.1073/pnas.040580397  1
1999 Andersen NH, Dyer RB, Fesinmeyer RM, Gai F, Liu Z, Neidigh JW, Tong H. Effect of hexafluoroisopropanol on the thermodynamics of peptide secondary structure formation [5] Journal of the American Chemical Society. 121: 9879-9880. DOI: 10.1021/ja991829k  1
1998 Gai F, Hasson KC, McDonald JC, Anfinrud PA. Chemical dynamics in proteins: the photoisomerization of retinal in bacteriorhodopsin. Science (New York, N.Y.). 279: 1886-91. PMID 9506931 DOI: 10.1126/science.279.5358.1886  1
1998 Dyer RB, Gai F, Woodruff WH, Gilmanshin R, Callender RH. Infrared Studies of Fast Events in Protein Folding Accounts of Chemical Research. 31: 709-716.  1
1997 Andel F, Hasson KC, Gai F, Anfinrud PA, Mathies RA. Femtosecond time-resolved spectroscopy of the primary photochemistry of phytochrome Biospectroscopy. 3: 421-433.  1
1997 Gai F, Hasson KC, McDonald JC, Anfinrud PA. Primary events in the photoisomerization of retinal in bacteriorhodopsin: Probing the reaction pathway with femtosecond spectroscopy Conference On Quantum Electronics and Laser Science (Qels) - Technical Digest Series. 12: 193.  1
1996 Hasson KC, Gai F, Anfinrud PA. The photoisomerization of retinal in bacteriorhodospin: experimental evidence for a three-state model. Proceedings of the National Academy of Sciences of the United States of America. 93: 15124-9. PMID 8986774 DOI: 10.1073/pnas.93.26.15124  1
1994 Gai F, Rich RL, Petrich JW. Monophotonic ionization of 7-azaindole, indole, and their derivatives and the role of overlapping excited states Journal of the American Chemical Society. 116: 735-746.  1
1993 Chen Y, Gai F, Petrich JW. Solvation of 7-azaindole in alcohols and water: Evidence for concerted, excited-state, double-proton transfer in alcohols Journal of the American Chemical Society. 115: 10158-10166.  1
1993 Gai F, Fehr MJ, Petrich JW. Ultrafast excited-state processes in the antiviral agent hypericin Journal of the American Chemical Society. 115: 3384-3385.  1
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