Ray Zhang - Related publications

Affiliations: 
2011-2014 Systems Pharmacology and Translational Therapeutics University of Pennsylvania Perelman School of Medicine 
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2021 Ma D, Przybylski D, Abruzzi KC, Schlichting M, Li Q, Long X, Rosbash M. A transcriptomic taxonomy of circadian neurons around the clock. Elife. 10. PMID 33438579 DOI: 10.7554/eLife.63056   
2021 Litovchenko M, Meireles-Filho ACA, Frochaux MV, Bevers RPJ, Prunotto A, Anduaga AM, Hollis B, Gardeux V, Braman VS, Russeil JMC, Kadener S, Dal Peraro M, Deplancke B. Extensive tissue-specific expression variation and novel regulators underlying circadian behavior. Science Advances. 7. PMID 33514540 DOI: 10.1126/sciadv.abc3781   
2021 Killoy KM, Pehar M, Harlan BA, Vargas MR. Altered expression of clock and clock-controlled genes in a hSOD1-linked amyotrophic lateral sclerosis mouse model. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21343. PMID 33508151 DOI: 10.1096/fj.202000386RR   
2021 Weger BD, Gobet C, David FPA, Atger F, Martin E, Phillips NE, Charpagne A, Weger M, Naef F, Gachon F. Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33452134 DOI: 10.1073/pnas.2015803118   
2021 Wang Z, Su G, Dai Z, Meng M, Zhang H, Fan F, Liu Z, Zhang L, Weygant N, He F, Fang N, Zhang L, Cheng Q. Circadian clock genes promote glioma progression by affecting tumour immune infiltration and tumour cell proliferation. Cell Proliferation. e12988. PMID 33442944 DOI: 10.1111/cpr.12988   
2021 Zhao SQ, Gao Y, Zhang Y, Yang XP, Yang Z. cAMP/PKA/CREB signaling pathway-mediated effects of melatonin receptor genes on clock gene expression in Bactrian camel ovarian granulosa cells. Domestic Animal Endocrinology. 76: 106609. PMID 33636446 DOI: 10.1016/j.domaniend.2021.106609   
2021 Ahn HR, Kim YJ, Lim YJ, Duan S, Eom SH, Jung KH. Key Genes in the Melatonin Biosynthesis Pathway with Circadian Rhythm Are Associated with Various Abiotic Stresses. Plants (Basel, Switzerland). 10. PMID 33435489 DOI: 10.3390/plants10010129   
2021 Kim B, Kim J, Chun M, Park I, Kwak D, Choi M, Kim K, Choe HK. Multiplexed CRISPR-Cas9 system in a single adeno-associated virus to simultaneously knock out redundant clock genes. Scientific Reports. 11: 2575. PMID 33510438 DOI: 10.1038/s41598-021-82287-0   
2021 Dudek M, Angelucci C, Pathiranage D, Wang P, Mallikarjun V, Lawless C, Swift J, Kadler KE, Boot-Handford RP, Hoyland J, Lamande SR, Bateman JF, Meng QJ. Circadian time series proteomics reveals daily dynamics in cartilage physiology. Osteoarthritis and Cartilage. PMID 33610821 DOI: 10.1016/j.joca.2021.02.008   
2021 Chan F, Liu J. Molecular regulation of brain metabolism underlying circadian epilepsy. Epilepsia. PMID 33395505 DOI: 10.1111/epi.16796   
2021 Zhai J, Li S, Hu J, Gao M, Sun Y, Chen ZJ, Giudice LC, Du Y. In silico, in vitro and in vivo analysis identifies endometrial circadian clock genes in recurrent implantation failure. The Journal of Clinical Endocrinology and Metabolism. PMID 33619544 DOI: 10.1210/clinem/dgab119   
2021 Sancar A, Van Gelder RN. Clocks, cancer, and chronochemotherapy. Science (New York, N.Y.). 371. PMID 33384351 DOI: 10.1126/science.abb0738   
2021 Matsuo M, Seo K, Mizuguchi N, Yamazaki F, Urabe S, Yamada N, Doi M, Tominaga K, Okamura H. Role of α2δ3 in cellular synchronization of the suprachiasmatic nucleus under constant light conditions. Neuroscience. PMID 33609639 DOI: 10.1016/j.neuroscience.2021.02.016   
2021 Ch R, Rey G, Ray S, Jha PK, Driscoll PC, Dos Santos MS, Malik DM, Lach R, Weljie AM, MacRae JI, Valekunja UK, Reddy AB. Rhythmic glucose metabolism regulates the redox circadian clockwork in human red blood cells. Nature Communications. 12: 377. PMID 33452240 DOI: 10.1038/s41467-020-20479-4   
2021 Frase S, Kaiser S, Steimer M, Selzner L, Foit NA, Niesen WD, Schallner N. Patients with Subarachnoid Hemorrhage Exhibit Disturbed Expression Patterns of the Circadian Rhythm Gene . Life (Basel, Switzerland). 11. PMID 33562664 DOI: 10.3390/life11020124   
2021 Putker M, Wong DCS, Seinkmane E, Rzechorzek NM, Zeng A, Hoyle NP, Chesham JE, Edwards MD, Feeney KA, Fischer R, Peschel N, Chen KF, Vanden Oever M, Edgar RS, Selby CP, et al. CRYPTOCHROMES confer robustness, not rhythmicity, to circadian timekeeping. The Embo Journal. e106745. PMID 33491228 DOI: 10.15252/embj.2020106745   
2021 Droin C, Kholtei JE, Bahar Halpern K, Hurni C, Rozenberg M, Muvkadi S, Itzkovitz S, Naef F. Space-time logic of liver gene expression at sub-lobular scale. Nature Metabolism. PMID 33432202 DOI: 10.1038/s42255-020-00323-1   
2021 Wang Y, Anderson C, Dobrzynski H, Hart G, D'Souza A, Boyett MR. RNAseq shows an all-pervasive day-night rhythm in the transcriptome of the pacemaker of the heart. Scientific Reports. 11: 3565. PMID 33574422 DOI: 10.1038/s41598-021-82202-7   
2021 Zhang SL, Lahens NF, Yue Z, Arnold DM, Pakstis PP, Schwarz JE, Sehgal A. A circadian clock regulates efflux by the blood-brain barrier in mice and human cells. Nature Communications. 12: 617. PMID 33504784 DOI: 10.1038/s41467-020-20795-9   
2021 Hamnett R, Chesham JE, Maywood ES, Hastings MH. The Cell-Autonomous Clock of VIP Receptor VPAC2 Cells Regulates Period and Coherence of Circadian Behavior. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 41: 502-512. PMID 33234609 DOI: 10.1523/JNEUROSCI.2015-20.2020   
2021 Chen YL, Chuang JH, Wang HT, Chen HC, Liu WH, Yang MY. Altered Expression of Circadian Clock Genes in Patients with Atrial Fibrillation Is Associated with Atrial High-Rate Episodes and Left Atrial Remodeling. Diagnostics (Basel, Switzerland). 11. PMID 33430447 DOI: 10.3390/diagnostics11010090   
2021 George R, Stanewsky R. Peripheral Sensory Organs Contribute to Temperature Synchronization of the Circadian Clock in . Frontiers in Physiology. 12: 622545. PMID 33603678 DOI: 10.3389/fphys.2021.622545   
2021 Tinarelli F, Ivanova E, Colombi I, Barini E, Balzani E, Garcia CG, Gasparini L, Chiappalone M, Kelsey G, Tucci V. Cell-cell coupling and DNA methylation abnormal phenotypes in the after-hours mice. Epigenetics & Chromatin. 14: 1. PMID 33407878 DOI: 10.1186/s13072-020-00373-5   
2021 Nam YH, Jeong SY, Kim YH, Rodriguez I, Nuankaew W, Bhawal UK, Hong BN, Kang TH. Anti-aging effects of Korean Red Ginseng (KRG) in differentiated embryo chondrocyte (DEC) knockout mice. Journal of Ginseng Research. 45: 183-190. PMID 33437170 DOI: 10.1016/j.jgr.2020.09.003   
2021 Ruan W, Yuan X, Eltzschig HK. Circadian rhythm as a therapeutic target. Nature Reviews. Drug Discovery. PMID 33589815 DOI: 10.1038/s41573-020-00109-w   
2021 Collins EJ, Cervantes-Silva MP, Timmons GA, O'Siorain JR, Curtis AM, Hurley JM. Post-transcriptional circadian regulation in macrophages organizes temporally distinct immunometabolic states. Genome Research. PMID 33436377 DOI: 10.1101/gr.263814.120   
2021 Mermet J, Yeung J, Naef F. Oscillating and stable genome topologies underlie hepatic physiological rhythms during the circadian cycle. Plos Genetics. 17: e1009350. PMID 33524027 DOI: 10.1371/journal.pgen.1009350   
2021 Goldbeter A, Leloup JC. From circadian clock mechanism to sleep disorders and jet lag: Insights from a computational approach. Biochemical Pharmacology. 114482. PMID 33617843 DOI: 10.1016/j.bcp.2021.114482   
2021 Eelderink-Chen Z, Bosman J, Sartor F, Dodd AN, Kovács ÁT, Merrow M. A circadian clock in a nonphotosynthetic prokaryote. Science Advances. 7. PMID 33523996 DOI: 10.1126/sciadv.abe2086   
2021 Sato T, Greco CM. Expanding the link between circadian rhythms and redox metabolism of epigenetic control. Free Radical Biology & Medicine. PMID 33450380 DOI: 10.1016/j.freeradbiomed.2021.01.009   
2021 Lee Y, Fong SY, Shon J, Zhang SL, Brooks R, Lahens NF, Chen D, Dang CV, Field JM, Sehgal A. Time-of-day specificity of anticancer drugs may be mediated by circadian regulation of the cell cycle. Science Advances. 7. PMID 33579708 DOI: 10.1126/sciadv.abd2645   
2021 Sehgal A. The 2020 Pittendrigh/Aschoff Lecture: My Circadian Journey. Journal of Biological Rhythms. 748730420982398. PMID 33428509 DOI: 10.1177/0748730420982398   
2021 Zheng X, Zhang K, Zhao Y, Fent K. Environmental chemicals affect circadian rhythms: An underexplored effect influencing health and fitness in animals and humans. Environment International. 149: 106159. PMID 33508534 DOI: 10.1016/j.envint.2020.106159   
2021 Xu S, Huang J, Jin J, Huang W. Global Identification for Targets of Circadian Transcription Factors in Arabidopsis and Rice Using Chromatin Immunoprecipitation Followed by Sequencing (ChIP-seq). Methods in Molecular Biology (Clifton, N.J.). 2297: 61-74. PMID 33656670 DOI: 10.1007/978-1-0716-1370-2_7   
2021 Zhou Y, Kreek MJ. Blockade of alcohol excessive and "relapse" drinking in male mice by pharmacological cryptochrome (CRY) activation. Psychopharmacology. PMID 33420591 DOI: 10.1007/s00213-020-05757-9   
2021 Velingkaar N, Mezhnina V, Poe A, Kondratov RV. Two-meal caloric restriction induces 12-hour rhythms and improves glucose homeostasis. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21342. PMID 33543540 DOI: 10.1096/fj.202002470R   
2021 Kim JH, Bell LJ, Wang X, Wimalasekera R, Bastos HP, Kelly KA, Hannah MA, Webb AAR. Arabidopsis sirtuins and poly(ADP-ribose) polymerases regulate gene expression in the day but do not affect circadian rhythms. Plant, Cell & Environment. PMID 33464569 DOI: 10.1111/pce.13996   
2021 Sinturel F, Gos P, Petrenko V, Hagedorn C, Kreppel F, Storch KF, Knutti D, Liani A, Weitz C, Emmenegger Y, Franken P, Bonacina L, Dibner C, Schibler U. Circadian hepatocyte clocks keep synchrony in the absence of a master pacemaker in the suprachiasmatic nucleus or other extrahepatic clocks. Genes & Development. PMID 33602874 DOI: 10.1101/gad.346460.120   
2021 Wang M, Yu D, Zheng L, Hong B, Li H, Hu X, Zhang K, Mou Y. Mechanical Stress Affects Circadian Rhythm in Skeletal Muscle (C2C12 Myoblasts) by Reducing Per/Cry Gene Expression and Increasing Bmal1 Gene Expression. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 27: e928359. PMID 33444293 DOI: 10.12659/MSM.928359   
2021 Costa R, Montagnese S. The role of astrocytes in generating circadian rhythmicity in health and disease. Journal of Neurochemistry. PMID 33539604 DOI: 10.1111/jnc.15312   
2021 Liu JL, Wang CY, Cheng TY, Youlutuziayi Rixiati, Ji C, Deng M, Yao S, Yuan LH, Zhao YY, Shen T, Li JM. Circadian Clock Disruption Suppresses PDL1+ Intraepithelial B-cells in Experimental Colitis and Colitis Associated Colorectal Cancer. Cellular and Molecular Gastroenterology and Hepatology. PMID 33652118 DOI: 10.1016/j.jcmgh.2021.02.008   
2021 Sládek M, Liška K, Houdek P, Sumová A. Modulation of single cell circadian response to NMDA by diacylglycerol lipase inhibition reveals a role of endocannabinoids in light entrainment of the suprachiasmatic nucleus. Neuropharmacology. 108455. PMID 33444638 DOI: 10.1016/j.neuropharm.2021.108455   
2021 Russell AL, Miller L, Yi H, Keil R, Handa RJ, Wu TJ.  Knockout of the circadian gene, Per2, disrupts corticosterone secretion and results in depressive-like behaviors and deficits in startle responses. Bmc Neuroscience. 22: 5. PMID 33509094 DOI: 10.1186/s12868-020-00607-y   
2021 Björk V. Aging of the Suprachiasmatic Nucleus, CIRCLONSA syndrome, implications for regenerative medicine and restoration of the master body clock. Rejuvenation Research. PMID 33573456 DOI: 10.1089/rej.2020.2388   
2021 Ludin NM, Orts-Sebastian A, Cheeseman JF, Chong J, Merry AF, Cumin D, Yamazaki S, Pawley MDM, Warman GR. General Anaesthesia Shifts the Murine Circadian Clock in a Time-Dependant Fashion. Clocks & Sleep. 3: 87-97. PMID 33530488 DOI: 10.3390/clockssleep3010006   
2021 Sengupta S, Ince L, Sartor F, Borrmann H, Zhuang X, Naik A, Curtis A, McKeating JA. Clocks, Viruses, and Immunity: Lessons for the COVID-19 Pandemic. Journal of Biological Rhythms. 748730420987669. PMID 33480287 DOI: 10.1177/0748730420987669   
2021 Kim R, Reed MC. A mathematical model of circadian rhythms and dopamine. Theoretical Biology & Medical Modelling. 18: 8. PMID 33596936 DOI: 10.1186/s12976-021-00139-w   
2021 Haspel J, Kim M, Zee P, Schwarzmeier T, Montagnese S, Panda S, Albani A, Merrow M. A Timely Call to Arms: COVID-19, the Circadian Clock, and Critical Care. Journal of Biological Rhythms. 748730421992587. PMID 33573430 DOI: 10.1177/0748730421992587   
2021 Xu N, Shinohara K, Ea Saunders K, Geddes JR, Cipriani A. Effect of lithium on circadian rhythm in bipolar disorder: a systematic review and meta-analysis. Bipolar Disorders. PMID 33650218 DOI: 10.1111/bdi.13070   
2021 Perianez-Rodriguez J, Rodriguez M, Marconi M, Bustillo-Avendaño E, Wachsman G, Sanchez-Corrionero A, De Gernier H, Cabrera J, Perez-Garcia P, Gude I, Saez A, Serrano-Ron L, Beeckman T, Benfey PN, Rodríguez-Patón A, et al. An auxin-regulable oscillatory circuit drives the root clock in . Science Advances. 7. PMID 33523850 DOI: 10.1126/sciadv.abd4722