Ron Anafi - Publications

Affiliations: 
2011-2015 Medicine University of Pennsylvania Perelman School of Medicine 

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ. Reply to Furlan et al.: The role of SIRT1 in cell autonomous clock function. Proceedings of the National Academy of Sciences of the United States of America. PMID 31239349 DOI: 10.1073/pnas.1907923116  1
2018 Wu G, Ruben MD, Schmidt RE, Francey LJ, Smith DF, Anafi RC, Hughey JJ, Tasseff R, Sherrill JD, Oblong JE, Mills KJ, Hogenesch JB. Population-level rhythms in human skin with implications for circadian medicine. Proceedings of the National Academy of Sciences of the United States of America. PMID 30377266 DOI: 10.1073/pnas.1809442115  1
2018 Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ. Computational and experimental insights into the circadian effects of SIRT1. Proceedings of the National Academy of Sciences of the United States of America. PMID 30348778 DOI: 10.1073/pnas.1803410115  1
2018 Ruben MD, Wu G, Smith DF, Schmidt RE, Francey LJ, Lee YY, Anafi RC, Hogenesch JB. A database of tissue-specific rhythmically expressed human genes has potential applications in circadian medicine. Science Translational Medicine. 10. PMID 30209245 DOI: 10.1126/scitranslmed.aat8806  1
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  1
2017 Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, ... ... Anafi RC, et al. Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism. Cell Metabolism. 25: 1206. PMID 28467936 DOI: 10.1016/j.cmet.2017.04.023  1
2017 Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, ... ... Anafi RC, et al. Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism. Cell Metabolism. 25: 961-974.e4. PMID 28380384 DOI: 10.1016/j.cmet.2017.03.019  1
2016 Wu G, Anafi RC, Hughes ME, Kornacker K, Hogenesch JB. MetaCycle: an integrated R package to evaluate periodicity in large scale data. Bioinformatics (Oxford, England). PMID 27378304 DOI: 10.1093/bioinformatics/btw405  1
2016 Zhang R, Podtelezhnikov AA, Hogenesch JB, Anafi RC. Discovering Biology in Periodic Data through Phase Set Enrichment Analysis (PSEA). Journal of Biological Rhythms. 31: 244-57. PMID 26955841 DOI: 10.1177/0748730416631895  1
2014 Arnardottir ES, Nikonova EV, Shockley KR, Podtelezhnikov AA, Anafi RC, Tanis KQ, Maislin G, Stone DJ, Renger JJ, Winrow CJ, Pack AI. Blood-gene expression reveals reduced circadian rhythmicity in individuals resistant to sleep deprivation. Sleep. 37: 1589-600. PMID 25197809 DOI: 10.5665/sleep.4064  1
2014 Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB. Machine learning helps identify CHRONO as a circadian clock component. Plos Biology. 12: e1001840. PMID 24737000 DOI: 10.1371/journal.pbio.1001840  1
2013 Deckard A, Anafi RC, Hogenesch JB, Haase SB, Harer J. Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data. Bioinformatics (Oxford, England). 29: 3174-80. PMID 24058056 DOI: 10.1093/bioinformatics/btt541  1
2013 Anafi RC, Pellegrino R, Shockley KR, Romer M, Tufik S, Pack AI. Sleep is not just for the brain: transcriptional responses to sleep in peripheral tissues. Bmc Genomics. 14: 362. PMID 23721503 DOI: 10.1186/1471-2164-14-362  1
2011 Schwartz BL, Anafi RC, Aliyeva M, Thompson-Figueroa JA, Allen GB, Lundblad LK, Bates JH. Effects of central airway shunting on the mechanical impedance of the mouse lung. Annals of Biomedical Engineering. 39: 497-507. PMID 20640513 DOI: 10.1007/s10439-010-0123-2  1
2003 Anafi RC, Beck KC, Wilson TA. Impedance, gas mixing, and bimodal ventilation in constricted lungs. Journal of Applied Physiology (Bethesda, Md. : 1985). 94: 1003-11. PMID 12571131 DOI: 10.1152/japplphysiol.00569.2002  1
2002 Anafi RC, Wilson TA. Empirical model for dynamic force-length behavior of airway smooth muscle. Journal of Applied Physiology (Bethesda, Md. : 1985). 92: 455-60. PMID 11796651 DOI: 10.1152/japplphysiol.00643.2001  1
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